Multiple sequence alignment - TraesCS2D01G418700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G418700 chr2D 100.000 3900 0 0 1 3900 533035509 533039408 0.000000e+00 7203.0
1 TraesCS2D01G418700 chr2B 93.247 1466 63 9 813 2246 632619100 632620561 0.000000e+00 2126.0
2 TraesCS2D01G418700 chr2B 83.418 989 149 6 1037 2016 11578146 11577164 0.000000e+00 904.0
3 TraesCS2D01G418700 chr2B 90.374 561 48 5 2327 2883 632620581 632621139 0.000000e+00 732.0
4 TraesCS2D01G418700 chr2B 80.912 833 97 36 3077 3897 632621303 632622085 5.580000e-168 601.0
5 TraesCS2D01G418700 chr2B 93.294 343 18 2 440 782 632618268 632618605 5.820000e-138 501.0
6 TraesCS2D01G418700 chr2B 91.758 182 11 3 151 331 632617843 632618021 2.330000e-62 250.0
7 TraesCS2D01G418700 chr2B 89.565 115 12 0 1944 2058 12604711 12604825 3.140000e-31 147.0
8 TraesCS2D01G418700 chr2B 84.426 122 16 2 1 121 769107456 769107575 2.460000e-22 117.0
9 TraesCS2D01G418700 chr2B 98.361 61 1 0 2884 2944 632621120 632621180 1.480000e-19 108.0
10 TraesCS2D01G418700 chr2B 81.818 99 16 2 2158 2254 515262332 515262234 8.980000e-12 82.4
11 TraesCS2D01G418700 chr2A 92.955 1320 66 13 956 2254 677416796 677418109 0.000000e+00 1897.0
12 TraesCS2D01G418700 chr2A 92.527 562 38 4 2324 2883 677418108 677418667 0.000000e+00 802.0
13 TraesCS2D01G418700 chr2A 90.308 454 32 6 3449 3897 677478569 677479015 5.620000e-163 584.0
14 TraesCS2D01G418700 chr2A 87.703 431 47 6 2944 3372 677418754 677419180 7.530000e-137 497.0
15 TraesCS2D01G418700 chr2A 83.521 267 30 6 537 792 677415750 677416013 1.810000e-58 237.0
16 TraesCS2D01G418700 chr2A 98.361 61 1 0 2884 2944 677418648 677418708 1.480000e-19 108.0
17 TraesCS2D01G418700 chr7A 87.433 374 47 0 1091 1464 19165022 19164649 7.740000e-117 431.0
18 TraesCS2D01G418700 chr7A 73.908 939 214 20 1155 2070 108504003 108503073 8.020000e-92 348.0
19 TraesCS2D01G418700 chr7A 88.446 251 29 0 1829 2079 19151891 19151641 1.760000e-78 303.0
20 TraesCS2D01G418700 chr7A 81.132 106 18 2 2151 2254 74540837 74540942 2.500000e-12 84.2
21 TraesCS2D01G418700 chr7D 75.441 908 197 16 1155 2043 104210579 104211479 6.030000e-113 418.0
22 TraesCS2D01G418700 chr7D 97.143 35 1 0 2292 2326 573908693 573908727 4.210000e-05 60.2
23 TraesCS2D01G418700 chr6B 75.078 963 191 22 1150 2072 115683275 115684228 1.690000e-108 403.0
24 TraesCS2D01G418700 chr6B 76.038 313 72 3 2454 2764 115684352 115684663 4.030000e-35 159.0
25 TraesCS2D01G418700 chr6B 82.540 126 17 5 2133 2254 460784063 460783939 5.330000e-19 106.0
26 TraesCS2D01G418700 chr6D 81.481 270 50 0 1803 2072 46615955 46616224 5.070000e-54 222.0
27 TraesCS2D01G418700 chr6D 84.615 117 16 2 4 119 312824942 312825057 8.860000e-22 115.0
28 TraesCS2D01G418700 chr1A 84.038 213 28 3 1725 1931 6409803 6410015 2.380000e-47 200.0
29 TraesCS2D01G418700 chr1A 97.222 36 1 0 2290 2325 25538975 25539010 1.170000e-05 62.1
30 TraesCS2D01G418700 chr1A 81.429 70 12 1 3600 3668 197821393 197821462 5.440000e-04 56.5
31 TraesCS2D01G418700 chr6A 83.568 213 29 3 1725 1931 595892189 595892401 1.110000e-45 195.0
32 TraesCS2D01G418700 chr3B 81.609 174 31 1 7 179 694789379 694789206 4.060000e-30 143.0
33 TraesCS2D01G418700 chr3B 97.222 36 1 0 2292 2327 752295137 752295102 1.170000e-05 62.1
34 TraesCS2D01G418700 chr3B 91.304 46 3 1 2342 2386 802594255 802594300 1.170000e-05 62.1
35 TraesCS2D01G418700 chr5B 81.143 175 25 8 7 177 668279784 668279954 2.440000e-27 134.0
36 TraesCS2D01G418700 chr5B 85.714 91 10 3 2133 2220 210184359 210184449 4.150000e-15 93.5
37 TraesCS2D01G418700 chr5B 86.585 82 7 1 2248 2325 582898485 582898566 1.930000e-13 87.9
38 TraesCS2D01G418700 chr5D 80.220 182 18 12 26 193 451965957 451966134 1.900000e-23 121.0
39 TraesCS2D01G418700 chr5D 80.159 126 19 6 2133 2254 210839006 210839129 5.370000e-14 89.8
40 TraesCS2D01G418700 chr7B 80.263 152 28 2 29 180 18104723 18104574 3.180000e-21 113.0
41 TraesCS2D01G418700 chr7B 83.333 120 16 3 7 123 46989485 46989367 1.480000e-19 108.0
42 TraesCS2D01G418700 chr7B 83.824 68 8 1 3600 3667 298189320 298189384 1.170000e-05 62.1
43 TraesCS2D01G418700 chr7B 94.737 38 1 1 2292 2329 479528626 479528662 1.510000e-04 58.4
44 TraesCS2D01G418700 chr1B 78.534 191 28 7 1 179 410054479 410054668 3.180000e-21 113.0
45 TraesCS2D01G418700 chr1B 78.035 173 34 4 9 180 533183616 533183447 5.330000e-19 106.0
46 TraesCS2D01G418700 chr3D 83.333 120 17 3 7 125 406138058 406138175 1.480000e-19 108.0
47 TraesCS2D01G418700 chr3D 81.356 118 18 3 2133 2246 514180439 514180322 4.150000e-15 93.5
48 TraesCS2D01G418700 chr3D 97.143 35 1 0 2291 2325 13929193 13929159 4.210000e-05 60.2
49 TraesCS2D01G418700 chr3A 81.132 106 18 2 2151 2254 212735842 212735947 2.500000e-12 84.2
50 TraesCS2D01G418700 chr3A 80.189 106 19 2 2151 2254 287372303 287372408 1.160000e-10 78.7
51 TraesCS2D01G418700 chr3A 97.368 38 1 0 2290 2327 542736661 542736698 9.040000e-07 65.8
52 TraesCS2D01G418700 chr1D 97.222 36 1 0 2290 2325 451859053 451859088 1.170000e-05 62.1
53 TraesCS2D01G418700 chr1D 97.143 35 1 0 2291 2325 162713756 162713722 4.210000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G418700 chr2D 533035509 533039408 3899 False 7203.000000 7203 100.000000 1 3900 1 chr2D.!!$F1 3899
1 TraesCS2D01G418700 chr2B 11577164 11578146 982 True 904.000000 904 83.418000 1037 2016 1 chr2B.!!$R1 979
2 TraesCS2D01G418700 chr2B 632617843 632622085 4242 False 719.666667 2126 91.324333 151 3897 6 chr2B.!!$F3 3746
3 TraesCS2D01G418700 chr2A 677415750 677419180 3430 False 708.200000 1897 91.013400 537 3372 5 chr2A.!!$F2 2835
4 TraesCS2D01G418700 chr7A 108503073 108504003 930 True 348.000000 348 73.908000 1155 2070 1 chr7A.!!$R3 915
5 TraesCS2D01G418700 chr7D 104210579 104211479 900 False 418.000000 418 75.441000 1155 2043 1 chr7D.!!$F1 888
6 TraesCS2D01G418700 chr6B 115683275 115684663 1388 False 281.000000 403 75.558000 1150 2764 2 chr6B.!!$F1 1614

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
67 68 0.031917 TATGAGGGGTGCCGGTTAGA 60.032 55.0 1.90 0.00 0.00 2.10 F
129 130 0.037605 AAATCGTGACCGGACTGTCC 60.038 55.0 16.99 16.99 34.25 4.02 F
467 606 0.105224 TGAAGCCGGACAAACTTCGA 59.895 50.0 5.05 0.00 42.17 3.71 F
2267 3321 0.044092 TTGCTACTCCCTCCATCCCA 59.956 55.0 0.00 0.00 0.00 4.37 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2043 3074 0.600782 TAAACACCAAGGTCGCGGTC 60.601 55.000 6.13 0.00 31.41 4.79 R
2094 3125 3.123157 AGGAGTATGTCTCATGCATGC 57.877 47.619 22.25 11.82 44.40 4.06 R
2432 3501 2.035449 CCGACACCTTGTGAGTAACAGA 59.965 50.000 0.49 0.00 40.74 3.41 R
3479 4600 0.618458 AATTGCTTGCGGGGACTAGA 59.382 50.000 0.00 0.00 0.00 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 4.543361 TGCCCGGACGCCCCTATA 62.543 66.667 0.73 0.00 0.00 1.31
26 27 3.001406 GCCCGGACGCCCCTATAT 61.001 66.667 0.73 0.00 0.00 0.86
27 28 3.015312 GCCCGGACGCCCCTATATC 62.015 68.421 0.73 0.00 0.00 1.63
28 29 2.356780 CCCGGACGCCCCTATATCC 61.357 68.421 0.73 0.00 0.00 2.59
30 31 2.577593 GGACGCCCCTATATCCGC 59.422 66.667 0.00 0.00 0.00 5.54
31 32 2.577593 GACGCCCCTATATCCGCC 59.422 66.667 0.00 0.00 0.00 6.13
32 33 3.001406 ACGCCCCTATATCCGCCC 61.001 66.667 0.00 0.00 0.00 6.13
33 34 3.782443 CGCCCCTATATCCGCCCC 61.782 72.222 0.00 0.00 0.00 5.80
34 35 2.609610 GCCCCTATATCCGCCCCA 60.610 66.667 0.00 0.00 0.00 4.96
35 36 2.001269 GCCCCTATATCCGCCCCAT 61.001 63.158 0.00 0.00 0.00 4.00
36 37 0.693092 GCCCCTATATCCGCCCCATA 60.693 60.000 0.00 0.00 0.00 2.74
37 38 2.045557 GCCCCTATATCCGCCCCATAT 61.046 57.143 0.00 0.00 0.00 1.78
38 39 2.418669 CCCCTATATCCGCCCCATATT 58.581 52.381 0.00 0.00 0.00 1.28
39 40 2.783510 CCCCTATATCCGCCCCATATTT 59.216 50.000 0.00 0.00 0.00 1.40
40 41 3.435026 CCCCTATATCCGCCCCATATTTG 60.435 52.174 0.00 0.00 0.00 2.32
41 42 3.458118 CCCTATATCCGCCCCATATTTGA 59.542 47.826 0.00 0.00 0.00 2.69
42 43 4.444876 CCCTATATCCGCCCCATATTTGAG 60.445 50.000 0.00 0.00 0.00 3.02
43 44 2.489938 TATCCGCCCCATATTTGAGC 57.510 50.000 0.00 0.00 0.00 4.26
44 45 0.773644 ATCCGCCCCATATTTGAGCT 59.226 50.000 0.00 0.00 0.00 4.09
45 46 0.179020 TCCGCCCCATATTTGAGCTG 60.179 55.000 0.00 0.00 0.00 4.24
46 47 1.174712 CCGCCCCATATTTGAGCTGG 61.175 60.000 0.00 0.00 0.00 4.85
47 48 0.179020 CGCCCCATATTTGAGCTGGA 60.179 55.000 0.00 0.00 31.38 3.86
48 49 1.546323 CGCCCCATATTTGAGCTGGAT 60.546 52.381 0.00 0.00 31.38 3.41
49 50 2.290260 CGCCCCATATTTGAGCTGGATA 60.290 50.000 0.00 0.00 31.38 2.59
50 51 3.623203 CGCCCCATATTTGAGCTGGATAT 60.623 47.826 0.00 0.00 31.38 1.63
51 52 3.698040 GCCCCATATTTGAGCTGGATATG 59.302 47.826 0.00 2.26 34.86 1.78
52 53 4.568380 GCCCCATATTTGAGCTGGATATGA 60.568 45.833 16.46 0.00 36.37 2.15
53 54 5.191426 CCCCATATTTGAGCTGGATATGAG 58.809 45.833 16.46 7.94 36.37 2.90
54 55 5.191426 CCCATATTTGAGCTGGATATGAGG 58.809 45.833 16.46 13.12 36.37 3.86
55 56 5.191426 CCATATTTGAGCTGGATATGAGGG 58.809 45.833 16.46 3.28 36.37 4.30
56 57 3.803186 ATTTGAGCTGGATATGAGGGG 57.197 47.619 0.00 0.00 0.00 4.79
57 58 2.196742 TTGAGCTGGATATGAGGGGT 57.803 50.000 0.00 0.00 0.00 4.95
58 59 1.427809 TGAGCTGGATATGAGGGGTG 58.572 55.000 0.00 0.00 0.00 4.61
59 60 0.036022 GAGCTGGATATGAGGGGTGC 59.964 60.000 0.00 0.00 0.00 5.01
60 61 1.073897 GCTGGATATGAGGGGTGCC 59.926 63.158 0.00 0.00 0.00 5.01
61 62 1.372683 CTGGATATGAGGGGTGCCG 59.627 63.158 0.00 0.00 0.00 5.69
62 63 2.116983 CTGGATATGAGGGGTGCCGG 62.117 65.000 0.00 0.00 0.00 6.13
63 64 2.147387 GGATATGAGGGGTGCCGGT 61.147 63.158 1.90 0.00 0.00 5.28
64 65 1.705997 GGATATGAGGGGTGCCGGTT 61.706 60.000 1.90 0.00 0.00 4.44
65 66 1.053424 GATATGAGGGGTGCCGGTTA 58.947 55.000 1.90 0.00 0.00 2.85
66 67 1.002087 GATATGAGGGGTGCCGGTTAG 59.998 57.143 1.90 0.00 0.00 2.34
67 68 0.031917 TATGAGGGGTGCCGGTTAGA 60.032 55.000 1.90 0.00 0.00 2.10
68 69 1.623542 ATGAGGGGTGCCGGTTAGAC 61.624 60.000 1.90 0.00 0.00 2.59
69 70 3.007323 AGGGGTGCCGGTTAGACC 61.007 66.667 1.90 4.35 34.05 3.85
79 80 3.562397 GGTTAGACCGGGCATTTGA 57.438 52.632 11.69 0.00 0.00 2.69
80 81 1.379527 GGTTAGACCGGGCATTTGAG 58.620 55.000 11.69 0.00 0.00 3.02
81 82 1.379527 GTTAGACCGGGCATTTGAGG 58.620 55.000 11.69 0.00 0.00 3.86
82 83 1.065709 GTTAGACCGGGCATTTGAGGA 60.066 52.381 11.69 0.00 0.00 3.71
83 84 0.539986 TAGACCGGGCATTTGAGGAC 59.460 55.000 11.69 0.00 0.00 3.85
84 85 1.201429 AGACCGGGCATTTGAGGACT 61.201 55.000 11.69 0.00 0.00 3.85
85 86 1.002134 ACCGGGCATTTGAGGACTG 60.002 57.895 6.32 0.00 0.00 3.51
86 87 1.002134 CCGGGCATTTGAGGACTGT 60.002 57.895 0.00 0.00 0.00 3.55
87 88 0.609131 CCGGGCATTTGAGGACTGTT 60.609 55.000 0.00 0.00 0.00 3.16
88 89 0.804989 CGGGCATTTGAGGACTGTTC 59.195 55.000 0.00 0.00 0.00 3.18
89 90 0.804989 GGGCATTTGAGGACTGTTCG 59.195 55.000 0.00 0.00 0.00 3.95
90 91 1.610624 GGGCATTTGAGGACTGTTCGA 60.611 52.381 0.00 0.00 0.00 3.71
91 92 1.734465 GGCATTTGAGGACTGTTCGAG 59.266 52.381 0.00 0.00 0.00 4.04
92 93 1.734465 GCATTTGAGGACTGTTCGAGG 59.266 52.381 0.00 0.00 0.00 4.63
93 94 2.350522 CATTTGAGGACTGTTCGAGGG 58.649 52.381 0.00 0.00 0.00 4.30
94 95 0.685097 TTTGAGGACTGTTCGAGGGG 59.315 55.000 0.00 0.00 0.00 4.79
95 96 1.827399 TTGAGGACTGTTCGAGGGGC 61.827 60.000 0.00 0.00 0.00 5.80
96 97 1.985116 GAGGACTGTTCGAGGGGCT 60.985 63.158 0.00 0.00 0.00 5.19
97 98 2.232298 GAGGACTGTTCGAGGGGCTG 62.232 65.000 0.00 0.00 0.00 4.85
98 99 2.584391 GGACTGTTCGAGGGGCTGT 61.584 63.158 0.00 0.00 0.00 4.40
99 100 1.079750 GACTGTTCGAGGGGCTGTC 60.080 63.158 0.00 0.00 0.00 3.51
100 101 1.534235 ACTGTTCGAGGGGCTGTCT 60.534 57.895 0.00 0.00 0.00 3.41
101 102 1.079543 CTGTTCGAGGGGCTGTCTG 60.080 63.158 0.00 0.00 0.00 3.51
102 103 2.266055 GTTCGAGGGGCTGTCTGG 59.734 66.667 0.00 0.00 0.00 3.86
103 104 3.003173 TTCGAGGGGCTGTCTGGG 61.003 66.667 0.00 0.00 0.00 4.45
104 105 3.846405 TTCGAGGGGCTGTCTGGGT 62.846 63.158 0.00 0.00 0.00 4.51
105 106 2.363795 CGAGGGGCTGTCTGGGTA 60.364 66.667 0.00 0.00 0.00 3.69
106 107 1.987855 CGAGGGGCTGTCTGGGTAA 60.988 63.158 0.00 0.00 0.00 2.85
107 108 1.550130 CGAGGGGCTGTCTGGGTAAA 61.550 60.000 0.00 0.00 0.00 2.01
108 109 0.696501 GAGGGGCTGTCTGGGTAAAA 59.303 55.000 0.00 0.00 0.00 1.52
109 110 1.074889 GAGGGGCTGTCTGGGTAAAAA 59.925 52.381 0.00 0.00 0.00 1.94
127 128 2.249844 AAAAATCGTGACCGGACTGT 57.750 45.000 9.46 0.00 33.95 3.55
128 129 1.792006 AAAATCGTGACCGGACTGTC 58.208 50.000 9.46 0.00 35.77 3.51
129 130 0.037605 AAATCGTGACCGGACTGTCC 60.038 55.000 16.99 16.99 34.25 4.02
130 131 1.183030 AATCGTGACCGGACTGTCCA 61.183 55.000 25.42 5.47 35.91 4.02
131 132 1.183030 ATCGTGACCGGACTGTCCAA 61.183 55.000 25.42 6.08 35.91 3.53
132 133 1.663702 CGTGACCGGACTGTCCAAC 60.664 63.158 25.42 15.82 35.91 3.77
133 134 1.301479 GTGACCGGACTGTCCAACC 60.301 63.158 25.42 13.60 35.91 3.77
134 135 2.048503 GACCGGACTGTCCAACCG 60.049 66.667 25.42 12.62 45.24 4.44
147 148 3.720949 TCCAACCGGACATATAAGACG 57.279 47.619 9.46 0.00 35.91 4.18
159 160 1.583054 ATAAGACGGATTTGAGGCGC 58.417 50.000 0.00 0.00 0.00 6.53
163 164 4.830765 CGGATTTGAGGCGCCCGA 62.831 66.667 26.15 12.10 42.49 5.14
173 174 2.607892 GGCGCCCGATTGTAGATGC 61.608 63.158 18.11 0.00 0.00 3.91
177 178 1.269723 CGCCCGATTGTAGATGCTCTA 59.730 52.381 0.00 0.00 0.00 2.43
179 180 3.321497 GCCCGATTGTAGATGCTCTAAG 58.679 50.000 0.00 0.00 29.58 2.18
180 181 3.321497 CCCGATTGTAGATGCTCTAAGC 58.679 50.000 0.00 0.00 42.82 3.09
192 193 2.525055 GCTCTAAGCACAAGAGAGACG 58.475 52.381 12.60 0.00 42.63 4.18
193 194 2.094957 GCTCTAAGCACAAGAGAGACGT 60.095 50.000 12.60 0.00 42.63 4.34
212 213 1.907807 GACCTGCACAATGGCCCAA 60.908 57.895 0.00 0.00 0.00 4.12
227 228 5.622346 TGGCCCAACACTAAAATTTTCTT 57.378 34.783 6.72 0.00 0.00 2.52
253 254 2.154854 ATCACCACACAGTTCTCGTG 57.845 50.000 0.00 0.00 40.32 4.35
280 281 1.606903 TTGACATGACATGTGCAGCA 58.393 45.000 25.45 13.88 45.03 4.41
331 332 5.241728 GGGTTAAAATGAACAGAAGAGCACT 59.758 40.000 0.00 0.00 0.00 4.40
333 334 4.843220 AAAATGAACAGAAGAGCACTGG 57.157 40.909 0.00 0.00 39.38 4.00
334 335 3.777106 AATGAACAGAAGAGCACTGGA 57.223 42.857 0.00 0.00 39.38 3.86
335 336 3.996921 ATGAACAGAAGAGCACTGGAT 57.003 42.857 0.00 0.00 39.38 3.41
336 337 5.426689 AATGAACAGAAGAGCACTGGATA 57.573 39.130 0.00 0.00 39.38 2.59
337 338 4.462508 TGAACAGAAGAGCACTGGATAG 57.537 45.455 0.00 0.00 39.38 2.08
339 340 1.484240 ACAGAAGAGCACTGGATAGGC 59.516 52.381 0.00 0.00 39.38 3.93
340 341 1.483827 CAGAAGAGCACTGGATAGGCA 59.516 52.381 0.00 0.00 0.00 4.75
341 342 1.484240 AGAAGAGCACTGGATAGGCAC 59.516 52.381 0.00 0.00 0.00 5.01
343 344 0.972983 AGAGCACTGGATAGGCACGT 60.973 55.000 0.00 0.00 0.00 4.49
344 345 0.528684 GAGCACTGGATAGGCACGTC 60.529 60.000 0.00 0.00 0.00 4.34
345 346 1.521681 GCACTGGATAGGCACGTCC 60.522 63.158 0.00 0.00 38.25 4.79
347 348 2.417516 CTGGATAGGCACGTCCCG 59.582 66.667 0.00 0.00 37.23 5.14
348 349 2.043752 TGGATAGGCACGTCCCGA 60.044 61.111 0.00 0.00 37.23 5.14
350 351 2.125961 GGATAGGCACGTCCCGACT 61.126 63.158 0.00 0.00 33.05 4.18
353 354 1.664321 ATAGGCACGTCCCGACTGTC 61.664 60.000 0.00 0.00 34.51 3.51
354 355 2.759641 TAGGCACGTCCCGACTGTCT 62.760 60.000 6.21 6.63 34.51 3.41
355 356 2.338015 GGCACGTCCCGACTGTCTA 61.338 63.158 6.21 0.00 0.00 2.59
356 357 1.154073 GCACGTCCCGACTGTCTAC 60.154 63.158 6.21 1.03 0.00 2.59
357 358 1.584380 GCACGTCCCGACTGTCTACT 61.584 60.000 6.21 0.00 0.00 2.57
358 359 1.730501 CACGTCCCGACTGTCTACTA 58.269 55.000 6.21 0.00 0.00 1.82
359 360 1.396301 CACGTCCCGACTGTCTACTAC 59.604 57.143 6.21 0.00 0.00 2.73
360 361 1.002430 ACGTCCCGACTGTCTACTACA 59.998 52.381 6.21 0.00 36.42 2.74
364 365 1.676916 CCCGACTGTCTACTACACCGA 60.677 57.143 6.21 0.00 33.33 4.69
365 366 2.286872 CCGACTGTCTACTACACCGAT 58.713 52.381 6.21 0.00 33.33 4.18
366 367 2.031807 CCGACTGTCTACTACACCGATG 59.968 54.545 6.21 0.00 33.33 3.84
367 368 2.031807 CGACTGTCTACTACACCGATGG 59.968 54.545 6.21 0.00 33.33 3.51
368 369 3.015327 GACTGTCTACTACACCGATGGT 58.985 50.000 0.00 0.00 35.62 3.55
370 371 3.830755 ACTGTCTACTACACCGATGGTTT 59.169 43.478 0.00 0.00 31.02 3.27
372 373 5.125097 ACTGTCTACTACACCGATGGTTTAG 59.875 44.000 7.45 7.45 40.60 1.85
373 374 5.255687 TGTCTACTACACCGATGGTTTAGA 58.744 41.667 14.37 3.61 37.98 2.10
375 376 5.587844 GTCTACTACACCGATGGTTTAGAGA 59.412 44.000 14.37 10.11 37.98 3.10
376 377 6.094603 GTCTACTACACCGATGGTTTAGAGAA 59.905 42.308 14.37 1.57 37.98 2.87
377 378 5.326200 ACTACACCGATGGTTTAGAGAAG 57.674 43.478 14.37 0.00 37.98 2.85
378 379 4.771054 ACTACACCGATGGTTTAGAGAAGT 59.229 41.667 14.37 0.00 37.98 3.01
380 381 4.969484 ACACCGATGGTTTAGAGAAGTTT 58.031 39.130 0.00 0.00 31.02 2.66
381 382 5.374071 ACACCGATGGTTTAGAGAAGTTTT 58.626 37.500 0.00 0.00 31.02 2.43
382 383 5.469084 ACACCGATGGTTTAGAGAAGTTTTC 59.531 40.000 0.00 0.00 31.02 2.29
383 384 5.001874 ACCGATGGTTTAGAGAAGTTTTCC 58.998 41.667 0.00 0.00 27.29 3.13
385 386 4.092968 CGATGGTTTAGAGAAGTTTTCCCG 59.907 45.833 0.00 0.00 0.00 5.14
386 387 4.693042 TGGTTTAGAGAAGTTTTCCCGA 57.307 40.909 0.00 0.00 0.00 5.14
388 389 4.102054 TGGTTTAGAGAAGTTTTCCCGACT 59.898 41.667 0.00 0.00 0.00 4.18
389 390 4.451435 GGTTTAGAGAAGTTTTCCCGACTG 59.549 45.833 0.00 0.00 0.00 3.51
390 391 4.950205 TTAGAGAAGTTTTCCCGACTGT 57.050 40.909 0.00 0.00 0.00 3.55
391 392 3.388345 AGAGAAGTTTTCCCGACTGTC 57.612 47.619 0.00 0.00 0.00 3.51
392 393 2.966516 AGAGAAGTTTTCCCGACTGTCT 59.033 45.455 6.21 0.00 0.00 3.41
393 394 4.150359 AGAGAAGTTTTCCCGACTGTCTA 58.850 43.478 6.21 0.00 0.00 2.59
394 395 4.022155 AGAGAAGTTTTCCCGACTGTCTAC 60.022 45.833 6.21 0.00 0.00 2.59
395 396 3.896272 AGAAGTTTTCCCGACTGTCTACT 59.104 43.478 6.21 0.00 0.00 2.57
396 397 3.662247 AGTTTTCCCGACTGTCTACTG 57.338 47.619 6.21 0.00 0.00 2.74
397 398 3.228453 AGTTTTCCCGACTGTCTACTGA 58.772 45.455 6.21 0.00 0.00 3.41
398 399 3.640029 AGTTTTCCCGACTGTCTACTGAA 59.360 43.478 6.21 0.90 0.00 3.02
400 401 2.873094 TCCCGACTGTCTACTGAAGA 57.127 50.000 6.21 0.00 0.00 2.87
411 412 2.423892 TCTACTGAAGACTCCATCACGC 59.576 50.000 0.00 0.00 0.00 5.34
412 413 1.261480 ACTGAAGACTCCATCACGCT 58.739 50.000 0.00 0.00 0.00 5.07
413 414 1.203523 ACTGAAGACTCCATCACGCTC 59.796 52.381 0.00 0.00 0.00 5.03
414 415 1.476085 CTGAAGACTCCATCACGCTCT 59.524 52.381 0.00 0.00 0.00 4.09
415 416 1.203287 TGAAGACTCCATCACGCTCTG 59.797 52.381 0.00 0.00 0.00 3.35
416 417 1.203523 GAAGACTCCATCACGCTCTGT 59.796 52.381 0.00 0.00 0.00 3.41
417 418 0.814457 AGACTCCATCACGCTCTGTC 59.186 55.000 0.00 0.00 0.00 3.51
418 419 0.179124 GACTCCATCACGCTCTGTCC 60.179 60.000 0.00 0.00 0.00 4.02
419 420 0.900182 ACTCCATCACGCTCTGTCCA 60.900 55.000 0.00 0.00 0.00 4.02
421 422 0.684535 TCCATCACGCTCTGTCCAAA 59.315 50.000 0.00 0.00 0.00 3.28
422 423 1.071542 TCCATCACGCTCTGTCCAAAA 59.928 47.619 0.00 0.00 0.00 2.44
423 424 1.466167 CCATCACGCTCTGTCCAAAAG 59.534 52.381 0.00 0.00 0.00 2.27
424 425 2.416747 CATCACGCTCTGTCCAAAAGA 58.583 47.619 0.00 0.00 0.00 2.52
425 426 2.154854 TCACGCTCTGTCCAAAAGAG 57.845 50.000 0.00 0.00 43.42 2.85
432 433 4.480386 CTCTGTCCAAAAGAGCACTTTC 57.520 45.455 9.66 0.00 44.32 2.62
433 434 3.879295 CTCTGTCCAAAAGAGCACTTTCA 59.121 43.478 9.66 3.02 44.32 2.69
435 436 3.620488 TGTCCAAAAGAGCACTTTCAGT 58.380 40.909 9.66 0.00 44.32 3.41
448 587 5.686159 CACTTTCAGTGCTCTTCTTCATT 57.314 39.130 0.00 0.00 39.62 2.57
450 589 5.237996 CACTTTCAGTGCTCTTCTTCATTGA 59.762 40.000 0.00 0.00 39.62 2.57
457 596 2.936993 GCTCTTCTTCATTGAAGCCGGA 60.937 50.000 19.53 15.05 42.15 5.14
467 606 0.105224 TGAAGCCGGACAAACTTCGA 59.895 50.000 5.05 0.00 42.17 3.71
481 620 6.380190 ACAAACTTCGATGTAGTAGACAGTC 58.620 40.000 4.16 0.00 42.79 3.51
482 621 6.016527 ACAAACTTCGATGTAGTAGACAGTCA 60.017 38.462 4.16 0.00 42.79 3.41
484 623 4.636648 ACTTCGATGTAGTAGACAGTCAGG 59.363 45.833 2.66 0.00 42.79 3.86
498 637 3.584848 ACAGTCAGGAAGTGGCTTTATCT 59.415 43.478 0.00 0.00 38.21 1.98
502 641 7.125811 ACAGTCAGGAAGTGGCTTTATCTAATA 59.874 37.037 0.00 0.00 38.21 0.98
505 644 8.613482 GTCAGGAAGTGGCTTTATCTAATAAAC 58.387 37.037 0.00 0.00 31.84 2.01
506 645 8.325787 TCAGGAAGTGGCTTTATCTAATAAACA 58.674 33.333 0.00 0.00 31.84 2.83
507 646 8.956426 CAGGAAGTGGCTTTATCTAATAAACAA 58.044 33.333 0.00 0.00 31.84 2.83
508 647 9.528489 AGGAAGTGGCTTTATCTAATAAACAAA 57.472 29.630 0.00 0.00 31.84 2.83
580 720 1.271379 GGCCAGCACACTTCCTCTAAA 60.271 52.381 0.00 0.00 0.00 1.85
589 729 3.005578 ACACTTCCTCTAAACCGTCTGAC 59.994 47.826 0.00 0.00 0.00 3.51
599 739 0.670546 ACCGTCTGACCTGCAATTCG 60.671 55.000 1.55 0.00 0.00 3.34
782 931 9.280174 CACACTTTATAGAGTTAACAAAGGGAA 57.720 33.333 19.08 3.86 34.10 3.97
811 1005 7.819900 GCAATCATAATCCTACTTACCTAGGTG 59.180 40.741 25.33 11.28 35.60 4.00
848 1664 7.864379 ACTATGAGAAAAATGAAGCAAAGTGTG 59.136 33.333 0.00 0.00 0.00 3.82
849 1665 5.964758 TGAGAAAAATGAAGCAAAGTGTGT 58.035 33.333 0.00 0.00 0.00 3.72
864 1680 7.041780 AGCAAAGTGTGTTAATCTCTGTAACAG 60.042 37.037 0.00 0.00 41.02 3.16
891 1707 6.636454 TGTCCTAAGTCTGGAATTATTGGT 57.364 37.500 0.00 0.00 35.10 3.67
921 1738 1.547372 AGGGCTTGTGCAATCAATCAC 59.453 47.619 0.00 0.00 41.91 3.06
932 1906 4.033932 TGCAATCAATCACGGTTAATCTCG 59.966 41.667 0.00 0.00 0.00 4.04
1231 2221 4.778143 CCTTCTCCAACCGCCCGG 62.778 72.222 4.96 4.96 42.03 5.73
1278 2268 2.435938 CACCGCCGCTACCACAAT 60.436 61.111 0.00 0.00 0.00 2.71
1335 2325 4.379243 CGCCGCAACCTCACCTCT 62.379 66.667 0.00 0.00 0.00 3.69
1351 2341 0.749649 CTCTGAGGTTCTCCATCCGG 59.250 60.000 0.00 0.00 35.89 5.14
1428 2418 1.548269 GACCTAAGAGAGCAGTGCACT 59.452 52.381 15.25 15.25 31.15 4.40
1434 2424 1.141657 AGAGAGCAGTGCACTTCCAAA 59.858 47.619 18.94 0.00 28.14 3.28
1605 2595 2.307309 CGTCTTCGCGAAGTTGCCA 61.307 57.895 39.17 22.95 39.38 4.92
1992 3023 2.269241 GGCGAGGAGGTTCTTGGG 59.731 66.667 0.00 0.00 0.00 4.12
2094 3125 2.872557 CAACGGACTGCATGCTGG 59.127 61.111 25.87 17.38 0.00 4.85
2130 3162 7.283329 ACATACTCCTTCCCTAATTAGCTTTG 58.717 38.462 6.99 0.00 0.00 2.77
2142 3194 7.308435 CCTAATTAGCTTTGTCTTTGACCAAG 58.692 38.462 6.99 7.04 38.04 3.61
2147 3199 5.891451 AGCTTTGTCTTTGACCAAGTTTAC 58.109 37.500 11.40 0.00 37.54 2.01
2255 3309 9.632638 ATCTTAATGTCCATATTGTTTGCTACT 57.367 29.630 0.00 0.00 0.00 2.57
2256 3310 9.109393 TCTTAATGTCCATATTGTTTGCTACTC 57.891 33.333 0.00 0.00 0.00 2.59
2257 3311 6.699575 AATGTCCATATTGTTTGCTACTCC 57.300 37.500 0.00 0.00 0.00 3.85
2258 3312 4.523083 TGTCCATATTGTTTGCTACTCCC 58.477 43.478 0.00 0.00 0.00 4.30
2259 3313 4.227300 TGTCCATATTGTTTGCTACTCCCT 59.773 41.667 0.00 0.00 0.00 4.20
2260 3314 4.816925 GTCCATATTGTTTGCTACTCCCTC 59.183 45.833 0.00 0.00 0.00 4.30
2261 3315 4.137543 CCATATTGTTTGCTACTCCCTCC 58.862 47.826 0.00 0.00 0.00 4.30
2262 3316 4.385199 CCATATTGTTTGCTACTCCCTCCA 60.385 45.833 0.00 0.00 0.00 3.86
2263 3317 5.380043 CATATTGTTTGCTACTCCCTCCAT 58.620 41.667 0.00 0.00 0.00 3.41
2264 3318 3.350219 TTGTTTGCTACTCCCTCCATC 57.650 47.619 0.00 0.00 0.00 3.51
2265 3319 1.559682 TGTTTGCTACTCCCTCCATCC 59.440 52.381 0.00 0.00 0.00 3.51
2266 3320 1.134068 GTTTGCTACTCCCTCCATCCC 60.134 57.143 0.00 0.00 0.00 3.85
2267 3321 0.044092 TTGCTACTCCCTCCATCCCA 59.956 55.000 0.00 0.00 0.00 4.37
2268 3322 0.268869 TGCTACTCCCTCCATCCCAT 59.731 55.000 0.00 0.00 0.00 4.00
2269 3323 1.507742 TGCTACTCCCTCCATCCCATA 59.492 52.381 0.00 0.00 0.00 2.74
2270 3324 2.183679 GCTACTCCCTCCATCCCATAG 58.816 57.143 0.00 0.00 0.00 2.23
2271 3325 2.493687 GCTACTCCCTCCATCCCATAGT 60.494 54.545 0.00 0.00 0.00 2.12
2272 3326 3.245658 GCTACTCCCTCCATCCCATAGTA 60.246 52.174 0.00 0.00 0.00 1.82
2273 3327 4.573087 GCTACTCCCTCCATCCCATAGTAT 60.573 50.000 0.00 0.00 0.00 2.12
2274 3328 5.340947 GCTACTCCCTCCATCCCATAGTATA 60.341 48.000 0.00 0.00 0.00 1.47
2275 3329 5.633473 ACTCCCTCCATCCCATAGTATAA 57.367 43.478 0.00 0.00 0.00 0.98
2276 3330 5.989717 ACTCCCTCCATCCCATAGTATAAA 58.010 41.667 0.00 0.00 0.00 1.40
2277 3331 6.399013 ACTCCCTCCATCCCATAGTATAAAA 58.601 40.000 0.00 0.00 0.00 1.52
2278 3332 6.502158 ACTCCCTCCATCCCATAGTATAAAAG 59.498 42.308 0.00 0.00 0.00 2.27
2279 3333 6.639938 TCCCTCCATCCCATAGTATAAAAGA 58.360 40.000 0.00 0.00 0.00 2.52
2280 3334 6.730977 TCCCTCCATCCCATAGTATAAAAGAG 59.269 42.308 0.00 0.00 0.00 2.85
2281 3335 6.502158 CCCTCCATCCCATAGTATAAAAGAGT 59.498 42.308 0.00 0.00 0.00 3.24
2282 3336 7.017651 CCCTCCATCCCATAGTATAAAAGAGTT 59.982 40.741 0.00 0.00 0.00 3.01
2283 3337 8.440771 CCTCCATCCCATAGTATAAAAGAGTTT 58.559 37.037 0.00 0.00 0.00 2.66
2284 3338 9.853177 CTCCATCCCATAGTATAAAAGAGTTTT 57.147 33.333 0.00 0.00 36.67 2.43
2319 3373 8.994429 AATGCTCTTATATTATGAGACGAAGG 57.006 34.615 0.00 0.00 33.20 3.46
2320 3374 6.925211 TGCTCTTATATTATGAGACGAAGGG 58.075 40.000 0.00 0.00 33.20 3.95
2321 3375 6.719829 TGCTCTTATATTATGAGACGAAGGGA 59.280 38.462 0.00 0.00 33.20 4.20
2322 3376 7.094162 TGCTCTTATATTATGAGACGAAGGGAG 60.094 40.741 0.00 0.00 33.20 4.30
2323 3377 7.094118 GCTCTTATATTATGAGACGAAGGGAGT 60.094 40.741 0.00 0.00 33.20 3.85
2324 3378 9.451002 CTCTTATATTATGAGACGAAGGGAGTA 57.549 37.037 0.00 0.00 33.20 2.59
2369 3435 9.534565 TTTAGTCAAAGCTAATATGCAGAGTAG 57.465 33.333 11.29 11.29 31.83 2.57
2377 3443 8.202745 AGCTAATATGCAGAGTAGACAAAAAC 57.797 34.615 19.16 0.18 34.99 2.43
2421 3489 9.482627 GAGATGAAATAACTAATCGAGGACATT 57.517 33.333 0.00 0.00 0.00 2.71
2436 3505 8.786826 TCGAGGACATTAATGTAATTTTCTGT 57.213 30.769 20.83 0.00 41.95 3.41
2456 3525 3.118702 TGTTACTCACAAGGTGTCGGAAA 60.119 43.478 0.00 0.00 34.79 3.13
2490 3559 1.417517 TCATGATGGCCAGCGTATTCT 59.582 47.619 16.87 0.00 0.00 2.40
2494 3563 0.541392 ATGGCCAGCGTATTCTGACA 59.459 50.000 13.05 0.00 36.19 3.58
2606 3675 0.309612 CGACAAAGGTGGGGAAAACG 59.690 55.000 0.00 0.00 0.00 3.60
2734 3803 0.180406 ACTTCACTGCCAACCTCGTT 59.820 50.000 0.00 0.00 0.00 3.85
2777 3846 4.664267 AGGGGGAGCTGGCTGTCA 62.664 66.667 0.00 0.00 0.00 3.58
2788 3857 2.268920 GCTGTCAATCTCCGCCCA 59.731 61.111 0.00 0.00 0.00 5.36
2795 3864 1.004161 TCAATCTCCGCCCACATTTCA 59.996 47.619 0.00 0.00 0.00 2.69
2797 3866 0.911769 ATCTCCGCCCACATTTCAGA 59.088 50.000 0.00 0.00 0.00 3.27
2871 3940 2.137692 GGGAGGGGATCTCGAAAGG 58.862 63.158 0.00 0.00 43.34 3.11
2872 3941 0.398664 GGGAGGGGATCTCGAAAGGA 60.399 60.000 0.00 0.00 43.34 3.36
2873 3942 1.044611 GGAGGGGATCTCGAAAGGAG 58.955 60.000 0.00 0.00 43.34 3.69
2874 3943 1.044611 GAGGGGATCTCGAAAGGAGG 58.955 60.000 0.00 0.00 43.34 4.30
2875 3944 0.637195 AGGGGATCTCGAAAGGAGGA 59.363 55.000 0.00 0.00 43.34 3.71
2876 3945 1.044611 GGGGATCTCGAAAGGAGGAG 58.955 60.000 0.00 0.00 43.34 3.69
2877 3946 1.689892 GGGGATCTCGAAAGGAGGAGT 60.690 57.143 0.00 0.00 43.34 3.85
2878 3947 2.424523 GGGGATCTCGAAAGGAGGAGTA 60.425 54.545 0.00 0.00 43.34 2.59
2879 3948 3.297736 GGGATCTCGAAAGGAGGAGTAA 58.702 50.000 0.00 0.00 43.34 2.24
2880 3949 3.705072 GGGATCTCGAAAGGAGGAGTAAA 59.295 47.826 0.00 0.00 43.34 2.01
2881 3950 4.345547 GGGATCTCGAAAGGAGGAGTAAAT 59.654 45.833 0.00 0.00 43.34 1.40
2882 3951 5.163290 GGGATCTCGAAAGGAGGAGTAAATT 60.163 44.000 0.00 0.00 43.34 1.82
2996 4112 2.162681 GGGATTGGGTTCTGAACACTG 58.837 52.381 22.18 0.00 35.28 3.66
3009 4125 4.453478 TCTGAACACTGAAGCACATCATTC 59.547 41.667 0.00 0.00 0.00 2.67
3032 4148 2.552315 CGGTTGTTCTGTTATGTTGGCT 59.448 45.455 0.00 0.00 0.00 4.75
3033 4149 3.609175 CGGTTGTTCTGTTATGTTGGCTG 60.609 47.826 0.00 0.00 0.00 4.85
3034 4150 3.568007 GGTTGTTCTGTTATGTTGGCTGA 59.432 43.478 0.00 0.00 0.00 4.26
3064 4180 9.869757 TGATAGTTTAAGAATGAACAGATCGAA 57.130 29.630 0.00 0.00 29.56 3.71
3069 4185 7.558161 TTAAGAATGAACAGATCGAATGCAT 57.442 32.000 0.00 0.00 0.00 3.96
3070 4186 5.419760 AGAATGAACAGATCGAATGCATG 57.580 39.130 0.00 0.00 0.00 4.06
3071 4187 4.275196 AGAATGAACAGATCGAATGCATGG 59.725 41.667 0.00 0.00 0.00 3.66
3073 4189 2.093021 TGAACAGATCGAATGCATGGGA 60.093 45.455 0.00 0.39 0.00 4.37
3074 4190 2.945080 ACAGATCGAATGCATGGGAT 57.055 45.000 11.39 11.39 0.00 3.85
3075 4191 2.501261 ACAGATCGAATGCATGGGATG 58.499 47.619 15.29 7.95 0.00 3.51
3110 4226 9.665264 AGTCGACTGAATTTTATTGTTCTTTTC 57.335 29.630 19.30 0.00 0.00 2.29
3125 4241 6.898041 TGTTCTTTTCAATCACTCATTACCG 58.102 36.000 0.00 0.00 0.00 4.02
3137 4253 3.627577 ACTCATTACCGTTCCATGCATTC 59.372 43.478 0.00 0.00 0.00 2.67
3174 4290 4.932200 ACAAGCAAGAGTATAGCACAACTC 59.068 41.667 4.65 4.65 42.02 3.01
3202 4318 7.038154 AGTTTCATTTTTCACTCGAATTCCA 57.962 32.000 0.00 0.00 0.00 3.53
3203 4319 7.141363 AGTTTCATTTTTCACTCGAATTCCAG 58.859 34.615 0.00 0.00 0.00 3.86
3204 4320 5.046910 TCATTTTTCACTCGAATTCCAGC 57.953 39.130 0.00 0.00 0.00 4.85
3214 4330 4.806247 ACTCGAATTCCAGCGATAAAAGAG 59.194 41.667 0.00 0.00 35.81 2.85
3223 4339 4.932200 CCAGCGATAAAAGAGAAGACAACT 59.068 41.667 0.00 0.00 0.00 3.16
3257 4373 6.208599 CCCACTAACCTGAATTATGTTGTTGT 59.791 38.462 0.00 0.00 0.00 3.32
3262 4378 4.826733 ACCTGAATTATGTTGTTGTGCTGA 59.173 37.500 0.00 0.00 0.00 4.26
3272 4388 2.642427 TGTTGTGCTGACATGTCACTT 58.358 42.857 24.56 0.00 35.46 3.16
3295 4411 7.512058 ACTTCCTCATGACACCATAGATTCTAT 59.488 37.037 0.08 0.08 0.00 1.98
3296 4412 8.956446 TTCCTCATGACACCATAGATTCTATA 57.044 34.615 5.88 0.00 0.00 1.31
3297 4413 9.552695 TTCCTCATGACACCATAGATTCTATAT 57.447 33.333 5.88 0.00 0.00 0.86
3298 4414 9.194972 TCCTCATGACACCATAGATTCTATATC 57.805 37.037 5.88 3.52 0.00 1.63
3313 4429 9.901172 AGATTCTATATCGGTTAAACCTTTTGT 57.099 29.630 0.00 0.00 35.66 2.83
3364 4480 9.345517 TCGATCAGAAACATTTCATTGATTTTC 57.654 29.630 7.10 0.00 39.61 2.29
3365 4481 9.131416 CGATCAGAAACATTTCATTGATTTTCA 57.869 29.630 7.10 0.00 39.61 2.69
3382 4498 7.819644 TGATTTTCACAATGAATGACTTCGAT 58.180 30.769 0.00 0.00 36.11 3.59
3387 4503 5.232838 TCACAATGAATGACTTCGATGATCG 59.767 40.000 8.83 8.83 42.10 3.69
3411 4527 6.085458 CGAACTATAACATGCGATGAATTTGC 59.915 38.462 0.00 0.00 35.05 3.68
3417 4533 3.916061 GCGATGAATTTGCGCCTAA 57.084 47.368 4.18 0.00 44.55 2.69
3418 4534 2.405892 GCGATGAATTTGCGCCTAAT 57.594 45.000 4.18 1.33 44.55 1.73
3429 4550 4.792521 TTGCGCCTAATGTTAAACCAAT 57.207 36.364 4.18 0.00 0.00 3.16
3435 4556 6.428771 GCGCCTAATGTTAAACCAATATCCTA 59.571 38.462 0.00 0.00 0.00 2.94
3437 4558 7.360946 CGCCTAATGTTAAACCAATATCCTAGC 60.361 40.741 0.00 0.00 0.00 3.42
3444 4565 8.774183 TGTTAAACCAATATCCTAGCTCCTAAA 58.226 33.333 0.00 0.00 0.00 1.85
3449 4570 6.112058 CCAATATCCTAGCTCCTAAAGATGC 58.888 44.000 0.00 0.00 0.00 3.91
3455 4576 1.488393 AGCTCCTAAAGATGCCAGACC 59.512 52.381 0.00 0.00 0.00 3.85
3460 4581 2.224066 CCTAAAGATGCCAGACCTACGG 60.224 54.545 0.00 0.00 0.00 4.02
3462 4583 1.276622 AAGATGCCAGACCTACGGTT 58.723 50.000 0.00 0.00 35.25 4.44
3488 4609 2.200052 CCACGAAGGTCTAGTCCCC 58.800 63.158 2.05 0.00 0.00 4.81
3504 4625 0.109132 CCCCGCAAGCAATTGAGAAC 60.109 55.000 10.34 0.00 0.00 3.01
3506 4629 1.000385 CCCGCAAGCAATTGAGAACAA 60.000 47.619 10.34 0.00 40.42 2.83
3509 4632 3.555139 CCGCAAGCAATTGAGAACAAAAA 59.445 39.130 10.34 0.00 39.54 1.94
3601 4724 8.536340 AGTTAAGGTTCTAATAGAGGTACTGG 57.464 38.462 0.00 0.00 41.55 4.00
3602 4725 8.121185 AGTTAAGGTTCTAATAGAGGTACTGGT 58.879 37.037 0.00 0.00 41.55 4.00
3603 4726 8.412456 GTTAAGGTTCTAATAGAGGTACTGGTC 58.588 40.741 0.00 0.00 41.55 4.02
3604 4727 6.344232 AGGTTCTAATAGAGGTACTGGTCT 57.656 41.667 0.00 0.00 41.55 3.85
3605 4728 6.130569 AGGTTCTAATAGAGGTACTGGTCTG 58.869 44.000 0.00 0.00 41.55 3.51
3606 4729 5.302313 GGTTCTAATAGAGGTACTGGTCTGG 59.698 48.000 0.00 0.00 41.55 3.86
3607 4730 5.728937 TCTAATAGAGGTACTGGTCTGGT 57.271 43.478 0.00 0.00 41.55 4.00
3608 4731 6.836714 TCTAATAGAGGTACTGGTCTGGTA 57.163 41.667 0.00 0.00 41.55 3.25
3662 4785 8.997621 ACATCGACATCTAACTTTTAGCTAAA 57.002 30.769 14.96 14.96 0.00 1.85
3718 4842 2.642171 TTTAAGGAGAGGCAGAGGGA 57.358 50.000 0.00 0.00 0.00 4.20
3727 4851 1.144936 GGCAGAGGGAGTGGATTCG 59.855 63.158 0.00 0.00 0.00 3.34
3729 4853 1.144936 CAGAGGGAGTGGATTCGGC 59.855 63.158 0.00 0.00 0.00 5.54
3738 4862 2.278738 GGATTCGGCCACCCCAAT 59.721 61.111 2.24 0.00 0.00 3.16
3783 4907 7.880195 CCTAGATTGGTTTCCTCCTTATGTATG 59.120 40.741 0.00 0.00 0.00 2.39
3786 4910 5.367945 TGGTTTCCTCCTTATGTATGGAC 57.632 43.478 0.00 0.00 0.00 4.02
3828 4955 8.621286 GGTCTTTATTACAAATACATGGGTCTG 58.379 37.037 0.00 0.00 0.00 3.51
3833 4960 2.308570 ACAAATACATGGGTCTGGCTCA 59.691 45.455 0.00 0.00 0.00 4.26
3869 4996 4.141824 TGCATCACCTATTCATGGTTACGA 60.142 41.667 0.00 0.00 35.28 3.43
3871 4998 5.295787 GCATCACCTATTCATGGTTACGAAA 59.704 40.000 0.00 0.00 35.28 3.46
3873 5000 7.627513 GCATCACCTATTCATGGTTACGAAAAA 60.628 37.037 0.00 0.00 35.28 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 3.839046 ATATAGGGGCGTCCGGGCA 62.839 63.158 6.96 0.00 44.56 5.36
9 10 3.001406 ATATAGGGGCGTCCGGGC 61.001 66.667 0.00 0.00 41.52 6.13
10 11 2.356780 GGATATAGGGGCGTCCGGG 61.357 68.421 0.00 0.00 41.52 5.73
11 12 3.295800 GGATATAGGGGCGTCCGG 58.704 66.667 0.00 0.00 41.52 5.14
12 13 2.882876 CGGATATAGGGGCGTCCG 59.117 66.667 0.00 0.00 46.26 4.79
13 14 2.577593 GCGGATATAGGGGCGTCC 59.422 66.667 0.00 0.00 0.00 4.79
14 15 2.577593 GGCGGATATAGGGGCGTC 59.422 66.667 0.00 0.00 0.00 5.19
15 16 3.001406 GGGCGGATATAGGGGCGT 61.001 66.667 0.00 0.00 0.00 5.68
16 17 3.782443 GGGGCGGATATAGGGGCG 61.782 72.222 0.00 0.00 0.00 6.13
17 18 0.693092 TATGGGGCGGATATAGGGGC 60.693 60.000 0.00 0.00 0.00 5.80
18 19 2.118403 ATATGGGGCGGATATAGGGG 57.882 55.000 0.00 0.00 0.00 4.79
19 20 3.458118 TCAAATATGGGGCGGATATAGGG 59.542 47.826 0.00 0.00 0.00 3.53
20 21 4.708177 CTCAAATATGGGGCGGATATAGG 58.292 47.826 0.00 0.00 0.00 2.57
21 22 4.130118 GCTCAAATATGGGGCGGATATAG 58.870 47.826 0.00 0.00 0.00 1.31
22 23 3.780294 AGCTCAAATATGGGGCGGATATA 59.220 43.478 0.00 0.00 33.29 0.86
23 24 2.578021 AGCTCAAATATGGGGCGGATAT 59.422 45.455 0.00 0.00 33.29 1.63
24 25 1.985159 AGCTCAAATATGGGGCGGATA 59.015 47.619 0.00 0.00 33.29 2.59
25 26 0.773644 AGCTCAAATATGGGGCGGAT 59.226 50.000 0.00 0.00 33.29 4.18
26 27 0.179020 CAGCTCAAATATGGGGCGGA 60.179 55.000 0.00 0.00 33.29 5.54
27 28 1.174712 CCAGCTCAAATATGGGGCGG 61.175 60.000 0.00 0.00 33.29 6.13
28 29 0.179020 TCCAGCTCAAATATGGGGCG 60.179 55.000 0.00 0.00 34.71 6.13
29 30 2.299326 ATCCAGCTCAAATATGGGGC 57.701 50.000 0.00 0.00 34.71 5.80
30 31 5.183530 TCATATCCAGCTCAAATATGGGG 57.816 43.478 14.83 0.00 35.19 4.96
31 32 5.191426 CCTCATATCCAGCTCAAATATGGG 58.809 45.833 14.83 12.72 35.19 4.00
32 33 5.191426 CCCTCATATCCAGCTCAAATATGG 58.809 45.833 14.83 0.74 35.19 2.74
33 34 5.191426 CCCCTCATATCCAGCTCAAATATG 58.809 45.833 11.00 11.00 35.58 1.78
34 35 4.854436 ACCCCTCATATCCAGCTCAAATAT 59.146 41.667 0.00 0.00 0.00 1.28
35 36 4.042062 CACCCCTCATATCCAGCTCAAATA 59.958 45.833 0.00 0.00 0.00 1.40
36 37 3.059097 ACCCCTCATATCCAGCTCAAAT 58.941 45.455 0.00 0.00 0.00 2.32
37 38 2.173356 CACCCCTCATATCCAGCTCAAA 59.827 50.000 0.00 0.00 0.00 2.69
38 39 1.770658 CACCCCTCATATCCAGCTCAA 59.229 52.381 0.00 0.00 0.00 3.02
39 40 1.427809 CACCCCTCATATCCAGCTCA 58.572 55.000 0.00 0.00 0.00 4.26
40 41 0.036022 GCACCCCTCATATCCAGCTC 59.964 60.000 0.00 0.00 0.00 4.09
41 42 1.422161 GGCACCCCTCATATCCAGCT 61.422 60.000 0.00 0.00 0.00 4.24
42 43 1.073897 GGCACCCCTCATATCCAGC 59.926 63.158 0.00 0.00 0.00 4.85
43 44 1.372683 CGGCACCCCTCATATCCAG 59.627 63.158 0.00 0.00 0.00 3.86
44 45 2.146724 CCGGCACCCCTCATATCCA 61.147 63.158 0.00 0.00 0.00 3.41
45 46 1.705997 AACCGGCACCCCTCATATCC 61.706 60.000 0.00 0.00 0.00 2.59
46 47 1.002087 CTAACCGGCACCCCTCATATC 59.998 57.143 0.00 0.00 0.00 1.63
47 48 1.056660 CTAACCGGCACCCCTCATAT 58.943 55.000 0.00 0.00 0.00 1.78
48 49 0.031917 TCTAACCGGCACCCCTCATA 60.032 55.000 0.00 0.00 0.00 2.15
49 50 1.306654 TCTAACCGGCACCCCTCAT 60.307 57.895 0.00 0.00 0.00 2.90
50 51 2.120940 TCTAACCGGCACCCCTCA 59.879 61.111 0.00 0.00 0.00 3.86
51 52 2.582978 GTCTAACCGGCACCCCTC 59.417 66.667 0.00 0.00 0.00 4.30
52 53 3.007323 GGTCTAACCGGCACCCCT 61.007 66.667 0.00 0.00 0.00 4.79
61 62 1.379527 CTCAAATGCCCGGTCTAACC 58.620 55.000 0.00 0.00 34.05 2.85
62 63 1.065709 TCCTCAAATGCCCGGTCTAAC 60.066 52.381 0.00 0.00 0.00 2.34
63 64 1.065709 GTCCTCAAATGCCCGGTCTAA 60.066 52.381 0.00 0.00 0.00 2.10
64 65 0.539986 GTCCTCAAATGCCCGGTCTA 59.460 55.000 0.00 0.00 0.00 2.59
65 66 1.201429 AGTCCTCAAATGCCCGGTCT 61.201 55.000 0.00 0.00 0.00 3.85
66 67 1.026718 CAGTCCTCAAATGCCCGGTC 61.027 60.000 0.00 0.00 0.00 4.79
67 68 1.002134 CAGTCCTCAAATGCCCGGT 60.002 57.895 0.00 0.00 0.00 5.28
68 69 0.609131 AACAGTCCTCAAATGCCCGG 60.609 55.000 0.00 0.00 0.00 5.73
69 70 0.804989 GAACAGTCCTCAAATGCCCG 59.195 55.000 0.00 0.00 0.00 6.13
70 71 0.804989 CGAACAGTCCTCAAATGCCC 59.195 55.000 0.00 0.00 0.00 5.36
71 72 1.734465 CTCGAACAGTCCTCAAATGCC 59.266 52.381 0.00 0.00 0.00 4.40
72 73 1.734465 CCTCGAACAGTCCTCAAATGC 59.266 52.381 0.00 0.00 0.00 3.56
73 74 2.350522 CCCTCGAACAGTCCTCAAATG 58.649 52.381 0.00 0.00 0.00 2.32
74 75 1.279271 CCCCTCGAACAGTCCTCAAAT 59.721 52.381 0.00 0.00 0.00 2.32
75 76 0.685097 CCCCTCGAACAGTCCTCAAA 59.315 55.000 0.00 0.00 0.00 2.69
76 77 1.827399 GCCCCTCGAACAGTCCTCAA 61.827 60.000 0.00 0.00 0.00 3.02
77 78 2.283529 GCCCCTCGAACAGTCCTCA 61.284 63.158 0.00 0.00 0.00 3.86
78 79 1.985116 AGCCCCTCGAACAGTCCTC 60.985 63.158 0.00 0.00 0.00 3.71
79 80 2.120718 AGCCCCTCGAACAGTCCT 59.879 61.111 0.00 0.00 0.00 3.85
80 81 2.266055 CAGCCCCTCGAACAGTCC 59.734 66.667 0.00 0.00 0.00 3.85
81 82 1.079750 GACAGCCCCTCGAACAGTC 60.080 63.158 0.00 0.00 0.00 3.51
82 83 1.534235 AGACAGCCCCTCGAACAGT 60.534 57.895 0.00 0.00 0.00 3.55
83 84 1.079543 CAGACAGCCCCTCGAACAG 60.080 63.158 0.00 0.00 0.00 3.16
84 85 2.583441 CCAGACAGCCCCTCGAACA 61.583 63.158 0.00 0.00 0.00 3.18
85 86 2.266055 CCAGACAGCCCCTCGAAC 59.734 66.667 0.00 0.00 0.00 3.95
86 87 2.449967 TACCCAGACAGCCCCTCGAA 62.450 60.000 0.00 0.00 0.00 3.71
87 88 2.449967 TTACCCAGACAGCCCCTCGA 62.450 60.000 0.00 0.00 0.00 4.04
88 89 1.550130 TTTACCCAGACAGCCCCTCG 61.550 60.000 0.00 0.00 0.00 4.63
89 90 0.696501 TTTTACCCAGACAGCCCCTC 59.303 55.000 0.00 0.00 0.00 4.30
90 91 1.154430 TTTTTACCCAGACAGCCCCT 58.846 50.000 0.00 0.00 0.00 4.79
91 92 3.757836 TTTTTACCCAGACAGCCCC 57.242 52.632 0.00 0.00 0.00 5.80
108 109 2.140717 GACAGTCCGGTCACGATTTTT 58.859 47.619 0.00 0.00 44.60 1.94
109 110 1.607251 GGACAGTCCGGTCACGATTTT 60.607 52.381 3.05 0.00 44.60 1.82
110 111 0.037605 GGACAGTCCGGTCACGATTT 60.038 55.000 3.05 0.00 44.60 2.17
111 112 1.183030 TGGACAGTCCGGTCACGATT 61.183 55.000 15.24 0.00 44.60 3.34
112 113 1.183030 TTGGACAGTCCGGTCACGAT 61.183 55.000 15.24 0.00 44.60 3.73
113 114 1.829096 TTGGACAGTCCGGTCACGA 60.829 57.895 15.24 0.00 44.60 4.35
114 115 1.663702 GTTGGACAGTCCGGTCACG 60.664 63.158 15.24 0.00 40.17 4.35
115 116 1.301479 GGTTGGACAGTCCGGTCAC 60.301 63.158 15.24 8.53 40.17 3.67
116 117 2.863346 CGGTTGGACAGTCCGGTCA 61.863 63.158 15.24 0.00 40.17 4.02
117 118 2.048503 CGGTTGGACAGTCCGGTC 60.049 66.667 15.24 7.42 40.17 4.79
127 128 2.363038 CCGTCTTATATGTCCGGTTGGA 59.637 50.000 0.00 0.00 43.88 3.53
128 129 2.363038 TCCGTCTTATATGTCCGGTTGG 59.637 50.000 0.00 0.00 39.62 3.77
129 130 3.720949 TCCGTCTTATATGTCCGGTTG 57.279 47.619 0.00 0.00 39.62 3.77
130 131 4.950205 AATCCGTCTTATATGTCCGGTT 57.050 40.909 0.00 7.67 39.62 4.44
131 132 4.342951 TCAAATCCGTCTTATATGTCCGGT 59.657 41.667 0.00 0.00 39.62 5.28
132 133 4.878439 TCAAATCCGTCTTATATGTCCGG 58.122 43.478 0.00 0.00 39.98 5.14
133 134 4.923871 CCTCAAATCCGTCTTATATGTCCG 59.076 45.833 0.00 0.00 0.00 4.79
134 135 4.691216 GCCTCAAATCCGTCTTATATGTCC 59.309 45.833 0.00 0.00 0.00 4.02
135 136 4.386049 CGCCTCAAATCCGTCTTATATGTC 59.614 45.833 0.00 0.00 0.00 3.06
136 137 4.307432 CGCCTCAAATCCGTCTTATATGT 58.693 43.478 0.00 0.00 0.00 2.29
137 138 3.123621 GCGCCTCAAATCCGTCTTATATG 59.876 47.826 0.00 0.00 0.00 1.78
138 139 3.326747 GCGCCTCAAATCCGTCTTATAT 58.673 45.455 0.00 0.00 0.00 0.86
139 140 2.547218 GGCGCCTCAAATCCGTCTTATA 60.547 50.000 22.15 0.00 0.00 0.98
140 141 1.583054 GCGCCTCAAATCCGTCTTAT 58.417 50.000 0.00 0.00 0.00 1.73
141 142 0.461339 GGCGCCTCAAATCCGTCTTA 60.461 55.000 22.15 0.00 0.00 2.10
142 143 1.745489 GGCGCCTCAAATCCGTCTT 60.745 57.895 22.15 0.00 0.00 3.01
143 144 2.125106 GGCGCCTCAAATCCGTCT 60.125 61.111 22.15 0.00 0.00 4.18
144 145 3.202706 GGGCGCCTCAAATCCGTC 61.203 66.667 28.56 0.41 0.00 4.79
146 147 4.830765 TCGGGCGCCTCAAATCCG 62.831 66.667 28.56 19.41 41.80 4.18
147 148 1.823899 AATCGGGCGCCTCAAATCC 60.824 57.895 28.56 6.45 0.00 3.01
148 149 1.356624 CAATCGGGCGCCTCAAATC 59.643 57.895 28.56 7.30 0.00 2.17
149 150 0.107410 TACAATCGGGCGCCTCAAAT 60.107 50.000 28.56 11.82 0.00 2.32
173 174 3.189495 TCACGTCTCTCTTGTGCTTAGAG 59.811 47.826 0.00 0.00 40.39 2.43
177 178 1.269831 GGTCACGTCTCTCTTGTGCTT 60.270 52.381 0.00 0.00 33.69 3.91
179 180 0.315568 AGGTCACGTCTCTCTTGTGC 59.684 55.000 0.00 0.00 33.69 4.57
180 181 1.932604 GCAGGTCACGTCTCTCTTGTG 60.933 57.143 0.00 0.00 34.96 3.33
192 193 2.639327 GGGCCATTGTGCAGGTCAC 61.639 63.158 4.39 0.00 45.82 3.67
193 194 2.283101 GGGCCATTGTGCAGGTCA 60.283 61.111 4.39 0.00 0.00 4.02
204 205 5.823861 AGAAAATTTTAGTGTTGGGCCAT 57.176 34.783 7.26 0.00 0.00 4.40
227 228 6.071560 ACGAGAACTGTGTGGTGATTATCTAA 60.072 38.462 0.00 0.00 0.00 2.10
245 246 1.387084 GTCAATCACGAGCACGAGAAC 59.613 52.381 11.40 0.00 41.61 3.01
253 254 2.674852 ACATGTCATGTCAATCACGAGC 59.325 45.455 12.87 0.00 39.92 5.03
280 281 3.077484 AGCTTTCCATGCACAGTACAT 57.923 42.857 0.00 0.00 0.00 2.29
339 340 3.189429 TGTAGTAGACAGTCGGGACGTG 61.189 54.545 0.00 0.57 43.17 4.49
340 341 1.002430 TGTAGTAGACAGTCGGGACGT 59.998 52.381 0.00 0.00 43.17 4.34
341 342 1.730501 TGTAGTAGACAGTCGGGACG 58.269 55.000 0.00 0.00 43.75 4.79
343 344 1.676916 CGGTGTAGTAGACAGTCGGGA 60.677 57.143 0.00 0.00 39.29 5.14
344 345 0.731417 CGGTGTAGTAGACAGTCGGG 59.269 60.000 0.00 0.00 39.29 5.14
345 346 1.730501 TCGGTGTAGTAGACAGTCGG 58.269 55.000 0.00 0.00 39.29 4.79
347 348 3.015327 ACCATCGGTGTAGTAGACAGTC 58.985 50.000 0.00 0.00 39.29 3.51
348 349 3.083122 ACCATCGGTGTAGTAGACAGT 57.917 47.619 0.00 0.00 39.29 3.55
350 351 5.255687 TCTAAACCATCGGTGTAGTAGACA 58.744 41.667 9.66 0.00 42.53 3.41
353 354 6.095160 ACTTCTCTAAACCATCGGTGTAGTAG 59.905 42.308 9.66 8.48 42.53 2.57
354 355 5.948162 ACTTCTCTAAACCATCGGTGTAGTA 59.052 40.000 9.66 0.00 42.53 1.82
355 356 4.771054 ACTTCTCTAAACCATCGGTGTAGT 59.229 41.667 9.66 0.00 42.53 2.73
356 357 5.326200 ACTTCTCTAAACCATCGGTGTAG 57.674 43.478 4.23 4.23 43.12 2.74
357 358 5.733620 AACTTCTCTAAACCATCGGTGTA 57.266 39.130 0.00 0.00 35.34 2.90
358 359 4.618920 AACTTCTCTAAACCATCGGTGT 57.381 40.909 0.00 0.00 35.34 4.16
359 360 5.106673 GGAAAACTTCTCTAAACCATCGGTG 60.107 44.000 0.00 0.00 35.34 4.94
360 361 5.001874 GGAAAACTTCTCTAAACCATCGGT 58.998 41.667 0.00 0.00 37.65 4.69
364 365 5.001874 GTCGGGAAAACTTCTCTAAACCAT 58.998 41.667 0.00 0.00 0.00 3.55
365 366 4.102054 AGTCGGGAAAACTTCTCTAAACCA 59.898 41.667 0.00 0.00 0.00 3.67
366 367 4.451435 CAGTCGGGAAAACTTCTCTAAACC 59.549 45.833 0.00 0.00 0.00 3.27
367 368 5.055144 ACAGTCGGGAAAACTTCTCTAAAC 58.945 41.667 0.00 0.00 0.00 2.01
368 369 5.070047 AGACAGTCGGGAAAACTTCTCTAAA 59.930 40.000 0.00 0.00 0.00 1.85
370 371 4.150359 AGACAGTCGGGAAAACTTCTCTA 58.850 43.478 0.00 0.00 0.00 2.43
372 373 3.388345 AGACAGTCGGGAAAACTTCTC 57.612 47.619 0.00 0.00 0.00 2.87
373 374 3.896272 AGTAGACAGTCGGGAAAACTTCT 59.104 43.478 0.00 0.00 0.00 2.85
375 376 3.640029 TCAGTAGACAGTCGGGAAAACTT 59.360 43.478 0.00 0.00 0.00 2.66
376 377 3.228453 TCAGTAGACAGTCGGGAAAACT 58.772 45.455 0.00 0.00 0.00 2.66
377 378 3.655276 TCAGTAGACAGTCGGGAAAAC 57.345 47.619 0.00 0.00 0.00 2.43
378 379 3.893200 TCTTCAGTAGACAGTCGGGAAAA 59.107 43.478 0.00 0.00 0.00 2.29
380 381 3.150458 TCTTCAGTAGACAGTCGGGAA 57.850 47.619 0.00 0.00 0.00 3.97
381 382 2.873094 TCTTCAGTAGACAGTCGGGA 57.127 50.000 0.00 0.00 0.00 5.14
390 391 2.423892 GCGTGATGGAGTCTTCAGTAGA 59.576 50.000 0.00 0.00 0.00 2.59
391 392 2.425312 AGCGTGATGGAGTCTTCAGTAG 59.575 50.000 0.00 0.00 0.00 2.57
392 393 2.423892 GAGCGTGATGGAGTCTTCAGTA 59.576 50.000 0.00 0.00 0.00 2.74
393 394 1.203523 GAGCGTGATGGAGTCTTCAGT 59.796 52.381 0.00 0.00 0.00 3.41
394 395 1.476085 AGAGCGTGATGGAGTCTTCAG 59.524 52.381 0.00 0.00 0.00 3.02
395 396 1.203287 CAGAGCGTGATGGAGTCTTCA 59.797 52.381 0.00 0.00 0.00 3.02
396 397 1.203523 ACAGAGCGTGATGGAGTCTTC 59.796 52.381 0.00 0.00 0.00 2.87
397 398 1.203523 GACAGAGCGTGATGGAGTCTT 59.796 52.381 0.00 0.00 0.00 3.01
398 399 0.814457 GACAGAGCGTGATGGAGTCT 59.186 55.000 0.00 0.00 0.00 3.24
400 401 0.900182 TGGACAGAGCGTGATGGAGT 60.900 55.000 0.00 0.00 0.00 3.85
401 402 0.247460 TTGGACAGAGCGTGATGGAG 59.753 55.000 0.00 0.00 0.00 3.86
402 403 0.684535 TTTGGACAGAGCGTGATGGA 59.315 50.000 0.00 0.00 0.00 3.41
403 404 1.466167 CTTTTGGACAGAGCGTGATGG 59.534 52.381 0.00 0.00 0.00 3.51
404 405 2.414481 CTCTTTTGGACAGAGCGTGATG 59.586 50.000 0.00 0.00 31.65 3.07
405 406 2.693069 CTCTTTTGGACAGAGCGTGAT 58.307 47.619 0.00 0.00 31.65 3.06
406 407 2.154854 CTCTTTTGGACAGAGCGTGA 57.845 50.000 0.00 0.00 31.65 4.35
411 412 3.879295 TGAAAGTGCTCTTTTGGACAGAG 59.121 43.478 14.50 0.00 42.99 3.35
412 413 3.879295 CTGAAAGTGCTCTTTTGGACAGA 59.121 43.478 14.50 0.00 42.99 3.41
413 414 4.220533 CTGAAAGTGCTCTTTTGGACAG 57.779 45.455 14.50 12.55 42.99 3.51
428 429 5.936686 TCAATGAAGAAGAGCACTGAAAG 57.063 39.130 0.00 0.00 42.29 2.62
430 431 4.214971 GCTTCAATGAAGAAGAGCACTGAA 59.785 41.667 25.54 0.00 46.18 3.02
432 433 3.119919 GGCTTCAATGAAGAAGAGCACTG 60.120 47.826 25.54 0.00 46.18 3.66
433 434 3.080319 GGCTTCAATGAAGAAGAGCACT 58.920 45.455 25.54 0.00 46.18 4.40
435 436 2.079158 CGGCTTCAATGAAGAAGAGCA 58.921 47.619 25.54 0.00 46.18 4.26
437 438 2.675348 GTCCGGCTTCAATGAAGAAGAG 59.325 50.000 25.54 12.39 46.18 2.85
438 439 2.038426 TGTCCGGCTTCAATGAAGAAGA 59.962 45.455 25.54 14.82 46.18 2.87
443 582 2.582052 AGTTTGTCCGGCTTCAATGAA 58.418 42.857 0.00 0.00 0.00 2.57
448 587 0.105224 TCGAAGTTTGTCCGGCTTCA 59.895 50.000 16.02 4.97 38.70 3.02
450 589 1.156736 CATCGAAGTTTGTCCGGCTT 58.843 50.000 0.00 0.00 0.00 4.35
457 596 6.016527 TGACTGTCTACTACATCGAAGTTTGT 60.017 38.462 9.51 1.66 37.50 2.83
467 606 4.707448 CCACTTCCTGACTGTCTACTACAT 59.293 45.833 9.51 0.00 37.50 2.29
481 620 8.506168 TGTTTATTAGATAAAGCCACTTCCTG 57.494 34.615 0.00 0.00 35.56 3.86
482 621 9.528489 TTTGTTTATTAGATAAAGCCACTTCCT 57.472 29.630 0.00 0.00 35.56 3.36
580 720 0.670546 CGAATTGCAGGTCAGACGGT 60.671 55.000 0.00 0.00 0.00 4.83
589 729 0.883833 AGCTTGGAACGAATTGCAGG 59.116 50.000 0.00 0.00 37.47 4.85
599 739 4.572389 CACACACCATATCTAGCTTGGAAC 59.428 45.833 8.39 0.00 34.52 3.62
782 931 7.335127 AGGTAAGTAGGATTATGATTGCCAT 57.665 36.000 0.00 0.00 39.25 4.40
864 1680 9.057089 CCAATAATTCCAGACTTAGGACAATAC 57.943 37.037 0.00 0.00 34.19 1.89
891 1707 2.777114 TGCACAAGCCCTCCTATTGATA 59.223 45.455 0.00 0.00 41.13 2.15
921 1738 0.529992 GGCCCTGTCGAGATTAACCG 60.530 60.000 0.00 0.00 0.00 4.44
932 1906 3.433740 CCTCCTATTTGTAAGGCCCTGTC 60.434 52.174 0.00 0.00 33.84 3.51
988 1978 2.089980 GTCTTGCATGGCTGATGTCTT 58.910 47.619 0.00 0.00 34.14 3.01
989 1979 1.681166 GGTCTTGCATGGCTGATGTCT 60.681 52.381 4.03 0.00 34.14 3.41
1089 2079 4.477975 GCGAGGCGCGTGTAGACT 62.478 66.667 7.63 0.00 44.55 3.24
1231 2221 4.580551 GCTTGGCGCCATGGATGC 62.581 66.667 35.18 26.21 0.00 3.91
1278 2268 1.737816 GTATGGCGCCGAGGTTAGA 59.262 57.895 23.90 0.49 0.00 2.10
1335 2325 1.899437 GCACCGGATGGAGAACCTCA 61.899 60.000 9.46 0.00 39.21 3.86
1407 2397 1.548269 GTGCACTGCTCTCTTAGGTCT 59.452 52.381 10.32 0.00 0.00 3.85
1413 2403 0.761187 TGGAAGTGCACTGCTCTCTT 59.239 50.000 24.24 4.56 30.88 2.85
1428 2418 2.175035 CTAGGCCGTCGGGTTTGGAA 62.175 60.000 14.38 0.00 34.97 3.53
1434 2424 4.057943 AGGACTAGGCCGTCGGGT 62.058 66.667 14.38 1.44 34.75 5.28
2043 3074 0.600782 TAAACACCAAGGTCGCGGTC 60.601 55.000 6.13 0.00 31.41 4.79
2094 3125 3.123157 AGGAGTATGTCTCATGCATGC 57.877 47.619 22.25 11.82 44.40 4.06
2225 3279 9.463443 GCAAACAATATGGACATTAAGATTACC 57.537 33.333 0.00 0.00 0.00 2.85
2239 3293 4.137543 GGAGGGAGTAGCAAACAATATGG 58.862 47.826 0.00 0.00 0.00 2.74
2254 3308 6.730977 TCTTTTATACTATGGGATGGAGGGAG 59.269 42.308 0.00 0.00 0.00 4.30
2255 3309 6.639938 TCTTTTATACTATGGGATGGAGGGA 58.360 40.000 0.00 0.00 0.00 4.20
2256 3310 6.502158 ACTCTTTTATACTATGGGATGGAGGG 59.498 42.308 0.00 0.00 0.00 4.30
2257 3311 7.560796 ACTCTTTTATACTATGGGATGGAGG 57.439 40.000 0.00 0.00 0.00 4.30
2258 3312 9.853177 AAAACTCTTTTATACTATGGGATGGAG 57.147 33.333 0.00 0.00 0.00 3.86
2293 3347 9.429359 CCTTCGTCTCATAATATAAGAGCATTT 57.571 33.333 0.00 0.00 0.00 2.32
2294 3348 8.037758 CCCTTCGTCTCATAATATAAGAGCATT 58.962 37.037 0.00 0.00 0.00 3.56
2295 3349 7.397476 TCCCTTCGTCTCATAATATAAGAGCAT 59.603 37.037 0.00 0.00 0.00 3.79
2296 3350 6.719829 TCCCTTCGTCTCATAATATAAGAGCA 59.280 38.462 0.00 0.00 0.00 4.26
2297 3351 7.094118 ACTCCCTTCGTCTCATAATATAAGAGC 60.094 40.741 0.00 0.00 0.00 4.09
2298 3352 8.343168 ACTCCCTTCGTCTCATAATATAAGAG 57.657 38.462 0.00 0.00 0.00 2.85
2299 3353 9.976776 ATACTCCCTTCGTCTCATAATATAAGA 57.023 33.333 0.00 0.00 0.00 2.10
2304 3358 9.584008 AGTTTATACTCCCTTCGTCTCATAATA 57.416 33.333 0.00 0.00 0.00 0.98
2305 3359 8.480133 AGTTTATACTCCCTTCGTCTCATAAT 57.520 34.615 0.00 0.00 0.00 1.28
2306 3360 7.893124 AGTTTATACTCCCTTCGTCTCATAA 57.107 36.000 0.00 0.00 0.00 1.90
2307 3361 7.558807 TCAAGTTTATACTCCCTTCGTCTCATA 59.441 37.037 0.00 0.00 31.99 2.15
2308 3362 6.380274 TCAAGTTTATACTCCCTTCGTCTCAT 59.620 38.462 0.00 0.00 31.99 2.90
2309 3363 5.713389 TCAAGTTTATACTCCCTTCGTCTCA 59.287 40.000 0.00 0.00 31.99 3.27
2310 3364 6.205101 TCAAGTTTATACTCCCTTCGTCTC 57.795 41.667 0.00 0.00 31.99 3.36
2311 3365 6.793505 ATCAAGTTTATACTCCCTTCGTCT 57.206 37.500 0.00 0.00 31.99 4.18
2312 3366 8.937634 TTTATCAAGTTTATACTCCCTTCGTC 57.062 34.615 0.00 0.00 31.99 4.20
2313 3367 9.159364 GTTTTATCAAGTTTATACTCCCTTCGT 57.841 33.333 0.00 0.00 31.99 3.85
2314 3368 9.379791 AGTTTTATCAAGTTTATACTCCCTTCG 57.620 33.333 0.00 0.00 31.99 3.79
2362 3428 5.848406 ACTCCTCTGTTTTTGTCTACTCTG 58.152 41.667 0.00 0.00 0.00 3.35
2369 3435 7.964604 ATTGTAGTACTCCTCTGTTTTTGTC 57.035 36.000 0.00 0.00 0.00 3.18
2377 3443 7.340122 TCATCTCAATTGTAGTACTCCTCTG 57.660 40.000 0.00 0.00 0.00 3.35
2432 3501 2.035449 CCGACACCTTGTGAGTAACAGA 59.965 50.000 0.49 0.00 40.74 3.41
2436 3505 3.823281 TTTCCGACACCTTGTGAGTAA 57.177 42.857 0.49 0.00 36.96 2.24
2438 3507 2.702592 TTTTCCGACACCTTGTGAGT 57.297 45.000 0.49 0.00 36.96 3.41
2513 3582 3.184683 CGCCAGAGACTTCAGCGC 61.185 66.667 0.00 0.00 40.05 5.92
2606 3675 2.335011 GGCCGCAACAAGGTTGAC 59.665 61.111 12.90 3.90 0.00 3.18
2734 3803 1.435563 TCCCTCCACTCAAACTCCCTA 59.564 52.381 0.00 0.00 0.00 3.53
2777 3846 1.281867 TCTGAAATGTGGGCGGAGATT 59.718 47.619 0.00 0.00 0.00 2.40
2788 3857 6.938596 TCATGACAGTGAAGAATCTGAAATGT 59.061 34.615 0.00 0.00 35.84 2.71
2851 3920 2.370647 CTTTCGAGATCCCCTCCCGC 62.371 65.000 0.00 0.00 38.71 6.13
2861 3930 6.460399 CGAGAATTTACTCCTCCTTTCGAGAT 60.460 42.308 0.00 0.00 41.63 2.75
2862 3931 5.163642 CGAGAATTTACTCCTCCTTTCGAGA 60.164 44.000 0.00 0.00 41.63 4.04
2863 3932 5.038033 CGAGAATTTACTCCTCCTTTCGAG 58.962 45.833 0.00 0.00 38.46 4.04
2864 3933 4.703575 TCGAGAATTTACTCCTCCTTTCGA 59.296 41.667 0.00 0.00 33.83 3.71
2865 3934 4.995124 TCGAGAATTTACTCCTCCTTTCG 58.005 43.478 0.00 0.00 33.83 3.46
2866 3935 6.314152 CCTTTCGAGAATTTACTCCTCCTTTC 59.686 42.308 0.00 0.00 33.83 2.62
2867 3936 6.013639 TCCTTTCGAGAATTTACTCCTCCTTT 60.014 38.462 0.00 0.00 33.83 3.11
2868 3937 5.484290 TCCTTTCGAGAATTTACTCCTCCTT 59.516 40.000 0.00 0.00 33.83 3.36
2869 3938 5.024118 TCCTTTCGAGAATTTACTCCTCCT 58.976 41.667 0.00 0.00 33.83 3.69
2870 3939 5.340439 TCCTTTCGAGAATTTACTCCTCC 57.660 43.478 0.00 0.00 33.83 4.30
2871 3940 5.127356 TCCTCCTTTCGAGAATTTACTCCTC 59.873 44.000 0.00 0.00 41.63 3.71
2872 3941 5.024118 TCCTCCTTTCGAGAATTTACTCCT 58.976 41.667 0.00 0.00 41.63 3.69
2873 3942 5.105269 ACTCCTCCTTTCGAGAATTTACTCC 60.105 44.000 0.00 0.00 41.63 3.85
2874 3943 5.968254 ACTCCTCCTTTCGAGAATTTACTC 58.032 41.667 0.00 0.00 41.63 2.59
2875 3944 7.477945 TTACTCCTCCTTTCGAGAATTTACT 57.522 36.000 0.00 0.00 41.63 2.24
2876 3945 8.719560 ATTTACTCCTCCTTTCGAGAATTTAC 57.280 34.615 0.00 0.00 41.63 2.01
2878 3947 9.384764 CTAATTTACTCCTCCTTTCGAGAATTT 57.615 33.333 0.00 0.00 41.63 1.82
2879 3948 8.759782 TCTAATTTACTCCTCCTTTCGAGAATT 58.240 33.333 0.00 0.00 41.63 2.17
2880 3949 8.198778 GTCTAATTTACTCCTCCTTTCGAGAAT 58.801 37.037 0.00 0.00 41.63 2.40
2881 3950 7.177921 TGTCTAATTTACTCCTCCTTTCGAGAA 59.822 37.037 0.00 0.00 41.63 2.87
2882 3951 6.662234 TGTCTAATTTACTCCTCCTTTCGAGA 59.338 38.462 0.00 0.00 41.63 4.04
2996 4112 2.744202 ACAACCGAGAATGATGTGCTTC 59.256 45.455 0.00 0.00 0.00 3.86
3009 4125 3.364964 GCCAACATAACAGAACAACCGAG 60.365 47.826 0.00 0.00 0.00 4.63
3062 4178 4.392047 TGACATAGTCATCCCATGCATTC 58.608 43.478 0.00 0.00 37.67 2.67
3064 4180 3.393609 ACTGACATAGTCATCCCATGCAT 59.606 43.478 0.00 0.00 41.94 3.96
3065 4181 2.773661 ACTGACATAGTCATCCCATGCA 59.226 45.455 0.00 0.00 41.94 3.96
3105 4221 6.072728 TGGAACGGTAATGAGTGATTGAAAAG 60.073 38.462 0.00 0.00 0.00 2.27
3110 4226 4.496341 GCATGGAACGGTAATGAGTGATTG 60.496 45.833 0.00 0.00 0.00 2.67
3112 4228 3.206150 GCATGGAACGGTAATGAGTGAT 58.794 45.455 0.00 0.00 0.00 3.06
3117 4233 3.627123 CAGAATGCATGGAACGGTAATGA 59.373 43.478 0.00 0.00 0.00 2.57
3160 4276 6.220930 TGAAACTTTCGAGTTGTGCTATACT 58.779 36.000 0.00 0.00 31.64 2.12
3174 4290 7.608974 ATTCGAGTGAAAAATGAAACTTTCG 57.391 32.000 0.00 0.00 37.71 3.46
3202 4318 5.784177 TGAGTTGTCTTCTCTTTTATCGCT 58.216 37.500 0.00 0.00 33.59 4.93
3203 4319 6.467723 TTGAGTTGTCTTCTCTTTTATCGC 57.532 37.500 0.00 0.00 33.59 4.58
3204 4320 8.299262 TCTTTGAGTTGTCTTCTCTTTTATCG 57.701 34.615 0.00 0.00 33.59 2.92
3214 4330 3.003793 GTGGGCTTCTTTGAGTTGTCTTC 59.996 47.826 0.00 0.00 0.00 2.87
3223 4339 2.708861 TCAGGTTAGTGGGCTTCTTTGA 59.291 45.455 0.00 0.00 0.00 2.69
3257 4373 1.693606 TGAGGAAGTGACATGTCAGCA 59.306 47.619 28.54 15.83 40.75 4.41
3272 4388 9.194972 GATATAGAATCTATGGTGTCATGAGGA 57.805 37.037 12.73 0.00 34.96 3.71
3295 4411 6.072563 GGTGCTAACAAAAGGTTTAACCGATA 60.073 38.462 8.63 0.00 44.90 2.92
3296 4412 5.278610 GGTGCTAACAAAAGGTTTAACCGAT 60.279 40.000 8.63 0.00 44.90 4.18
3297 4413 4.036616 GGTGCTAACAAAAGGTTTAACCGA 59.963 41.667 8.63 0.00 44.90 4.69
3298 4414 4.037089 AGGTGCTAACAAAAGGTTTAACCG 59.963 41.667 8.63 0.00 44.90 4.44
3332 4448 9.297586 CAATGAAATGTTTCTGATCGAATGATT 57.702 29.630 6.99 0.00 38.02 2.57
3364 4480 5.232838 TCGATCATCGAAGTCATTCATTGTG 59.767 40.000 7.45 0.00 46.90 3.33
3365 4481 5.351458 TCGATCATCGAAGTCATTCATTGT 58.649 37.500 7.45 0.00 46.90 2.71
3382 4498 5.768317 TCATCGCATGTTATAGTTCGATCA 58.232 37.500 0.00 0.00 34.91 2.92
3387 4503 6.085458 CGCAAATTCATCGCATGTTATAGTTC 59.915 38.462 0.00 0.00 0.00 3.01
3411 4527 6.877611 AGGATATTGGTTTAACATTAGGCG 57.122 37.500 0.00 0.00 0.00 5.52
3413 4529 9.220767 GAGCTAGGATATTGGTTTAACATTAGG 57.779 37.037 0.00 0.00 0.00 2.69
3416 4532 7.816411 AGGAGCTAGGATATTGGTTTAACATT 58.184 34.615 0.00 0.00 0.00 2.71
3417 4533 7.394144 AGGAGCTAGGATATTGGTTTAACAT 57.606 36.000 0.00 0.00 0.00 2.71
3418 4534 6.824958 AGGAGCTAGGATATTGGTTTAACA 57.175 37.500 0.00 0.00 0.00 2.41
3429 4550 4.752063 TGGCATCTTTAGGAGCTAGGATA 58.248 43.478 0.00 0.00 0.00 2.59
3435 4556 1.488393 GGTCTGGCATCTTTAGGAGCT 59.512 52.381 0.00 0.00 0.00 4.09
3437 4558 3.243569 CGTAGGTCTGGCATCTTTAGGAG 60.244 52.174 0.00 0.00 0.00 3.69
3455 4576 1.541147 TCGTGGTCAGGTTAACCGTAG 59.459 52.381 18.91 12.86 39.81 3.51
3479 4600 0.618458 AATTGCTTGCGGGGACTAGA 59.382 50.000 0.00 0.00 0.00 2.43
3488 4609 4.775440 TTTTTGTTCTCAATTGCTTGCG 57.225 36.364 0.00 0.00 33.32 4.85
3518 4641 9.533253 CTATATCCGCAATATTCACATCACATA 57.467 33.333 0.00 0.00 32.64 2.29
3522 4645 8.477256 TCATCTATATCCGCAATATTCACATCA 58.523 33.333 0.00 0.00 32.64 3.07
3526 4649 8.709386 ACTTCATCTATATCCGCAATATTCAC 57.291 34.615 0.00 0.00 32.64 3.18
3575 4698 8.979534 CCAGTACCTCTATTAGAACCTTAACTT 58.020 37.037 0.00 0.00 0.00 2.66
3578 4701 8.342270 AGACCAGTACCTCTATTAGAACCTTAA 58.658 37.037 0.00 0.00 0.00 1.85
3579 4702 7.778853 CAGACCAGTACCTCTATTAGAACCTTA 59.221 40.741 0.00 0.00 0.00 2.69
3580 4703 6.608002 CAGACCAGTACCTCTATTAGAACCTT 59.392 42.308 0.00 0.00 0.00 3.50
3581 4704 6.130569 CAGACCAGTACCTCTATTAGAACCT 58.869 44.000 0.00 0.00 0.00 3.50
3582 4705 5.302313 CCAGACCAGTACCTCTATTAGAACC 59.698 48.000 0.00 0.00 0.00 3.62
3583 4706 5.892686 ACCAGACCAGTACCTCTATTAGAAC 59.107 44.000 0.00 0.00 0.00 3.01
3584 4707 6.088541 ACCAGACCAGTACCTCTATTAGAA 57.911 41.667 0.00 0.00 0.00 2.10
3585 4708 5.728937 ACCAGACCAGTACCTCTATTAGA 57.271 43.478 0.00 0.00 0.00 2.10
3586 4709 6.603224 ACTACCAGACCAGTACCTCTATTAG 58.397 44.000 0.00 0.00 0.00 1.73
3588 4711 5.469210 ACTACCAGACCAGTACCTCTATT 57.531 43.478 0.00 0.00 0.00 1.73
3589 4712 5.202004 CAACTACCAGACCAGTACCTCTAT 58.798 45.833 0.00 0.00 0.00 1.98
3590 4713 4.569228 CCAACTACCAGACCAGTACCTCTA 60.569 50.000 0.00 0.00 0.00 2.43
3591 4714 3.432378 CAACTACCAGACCAGTACCTCT 58.568 50.000 0.00 0.00 0.00 3.69
3592 4715 2.496470 CCAACTACCAGACCAGTACCTC 59.504 54.545 0.00 0.00 0.00 3.85
3593 4716 2.111255 TCCAACTACCAGACCAGTACCT 59.889 50.000 0.00 0.00 0.00 3.08
3594 4717 2.233186 GTCCAACTACCAGACCAGTACC 59.767 54.545 0.00 0.00 0.00 3.34
3595 4718 2.895404 TGTCCAACTACCAGACCAGTAC 59.105 50.000 0.00 0.00 0.00 2.73
3596 4719 2.895404 GTGTCCAACTACCAGACCAGTA 59.105 50.000 0.00 0.00 0.00 2.74
3597 4720 1.692519 GTGTCCAACTACCAGACCAGT 59.307 52.381 0.00 0.00 0.00 4.00
3598 4721 1.691976 TGTGTCCAACTACCAGACCAG 59.308 52.381 0.00 0.00 0.00 4.00
3599 4722 1.796017 TGTGTCCAACTACCAGACCA 58.204 50.000 0.00 0.00 0.00 4.02
3600 4723 2.922740 TTGTGTCCAACTACCAGACC 57.077 50.000 0.00 0.00 0.00 3.85
3601 4724 4.385825 TCATTTGTGTCCAACTACCAGAC 58.614 43.478 0.00 0.00 0.00 3.51
3602 4725 4.698201 TCATTTGTGTCCAACTACCAGA 57.302 40.909 0.00 0.00 0.00 3.86
3603 4726 4.821805 ACTTCATTTGTGTCCAACTACCAG 59.178 41.667 0.00 0.00 0.00 4.00
3604 4727 4.787551 ACTTCATTTGTGTCCAACTACCA 58.212 39.130 0.00 0.00 0.00 3.25
3605 4728 8.612619 CATATACTTCATTTGTGTCCAACTACC 58.387 37.037 0.00 0.00 0.00 3.18
3606 4729 9.378551 TCATATACTTCATTTGTGTCCAACTAC 57.621 33.333 0.00 0.00 0.00 2.73
3607 4730 9.952030 TTCATATACTTCATTTGTGTCCAACTA 57.048 29.630 0.00 0.00 0.00 2.24
3608 4731 8.862325 TTCATATACTTCATTTGTGTCCAACT 57.138 30.769 0.00 0.00 0.00 3.16
3662 4785 8.853126 GGGCTTCGTTTTAGGGTTATATTTTAT 58.147 33.333 0.00 0.00 0.00 1.40
3664 4787 6.893554 AGGGCTTCGTTTTAGGGTTATATTTT 59.106 34.615 0.00 0.00 0.00 1.82
3669 4792 5.434408 CTTAGGGCTTCGTTTTAGGGTTAT 58.566 41.667 0.00 0.00 0.00 1.89
3687 4810 2.783510 TCTCCTTAAATGCCCCCTTAGG 59.216 50.000 0.00 0.00 0.00 2.69
3697 4820 2.774234 TCCCTCTGCCTCTCCTTAAATG 59.226 50.000 0.00 0.00 0.00 2.32
3762 4886 6.160459 AGTCCATACATAAGGAGGAAACCAAT 59.840 38.462 0.00 0.00 33.85 3.16
3804 4928 7.284489 GCCAGACCCATGTATTTGTAATAAAGA 59.716 37.037 0.00 0.00 0.00 2.52
3809 4933 5.129368 AGCCAGACCCATGTATTTGTAAT 57.871 39.130 0.00 0.00 0.00 1.89
3810 4934 4.018870 TGAGCCAGACCCATGTATTTGTAA 60.019 41.667 0.00 0.00 0.00 2.41
3812 4936 2.308570 TGAGCCAGACCCATGTATTTGT 59.691 45.455 0.00 0.00 0.00 2.83
3813 4937 3.003394 TGAGCCAGACCCATGTATTTG 57.997 47.619 0.00 0.00 0.00 2.32
3824 4951 3.760684 ACCATCTCATTTTTGAGCCAGAC 59.239 43.478 0.00 0.00 35.97 3.51
3825 4952 3.760151 CACCATCTCATTTTTGAGCCAGA 59.240 43.478 0.00 0.00 35.97 3.86
3828 4955 2.231964 TGCACCATCTCATTTTTGAGCC 59.768 45.455 0.00 0.00 35.97 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.