Multiple sequence alignment - TraesCS2D01G415300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G415300 chr2D 100.000 4702 0 0 1 4702 529038968 529034267 0.000000e+00 8684.0
1 TraesCS2D01G415300 chr2D 93.487 783 35 8 1 770 604127628 604126849 0.000000e+00 1149.0
2 TraesCS2D01G415300 chr2D 79.371 1081 192 22 1867 2936 529013709 529012649 0.000000e+00 732.0
3 TraesCS2D01G415300 chr2D 77.445 1002 161 31 2091 3061 565859600 565858633 5.350000e-149 538.0
4 TraesCS2D01G415300 chr2D 80.201 399 58 17 3100 3489 472479952 472480338 3.580000e-71 279.0
5 TraesCS2D01G415300 chr2D 78.348 448 66 22 3061 3489 30739284 30739719 1.300000e-65 261.0
6 TraesCS2D01G415300 chr2D 77.528 445 70 25 3063 3489 468174694 468174262 1.690000e-59 241.0
7 TraesCS2D01G415300 chr2D 85.000 160 17 7 1073 1227 593792381 593792538 6.300000e-34 156.0
8 TraesCS2D01G415300 chr2D 89.796 49 2 2 1373 1419 175594138 175594185 5.080000e-05 60.2
9 TraesCS2D01G415300 chr2A 89.017 1912 127 41 1619 3488 673549925 673548055 0.000000e+00 2290.0
10 TraesCS2D01G415300 chr2A 92.042 1445 96 7 1622 3061 673957871 673956441 0.000000e+00 2013.0
11 TraesCS2D01G415300 chr2A 89.763 674 55 7 938 1606 673959423 673958759 0.000000e+00 850.0
12 TraesCS2D01G415300 chr2A 78.880 1089 207 16 1867 2948 673513906 673512834 0.000000e+00 715.0
13 TraesCS2D01G415300 chr2A 79.655 870 141 20 2091 2937 705995370 705994514 1.130000e-165 593.0
14 TraesCS2D01G415300 chr2A 96.618 207 4 3 3472 3676 385495381 385495586 1.620000e-89 340.0
15 TraesCS2D01G415300 chr2A 79.870 462 73 13 2043 2495 706198093 706197643 2.110000e-83 320.0
16 TraesCS2D01G415300 chr2A 94.574 129 7 0 753 881 673960618 673960490 2.870000e-47 200.0
17 TraesCS2D01G415300 chr2B 92.841 1313 70 8 1619 2921 628398483 628397185 0.000000e+00 1882.0
18 TraesCS2D01G415300 chr2B 87.978 890 67 17 753 1604 628400401 628399514 0.000000e+00 1014.0
19 TraesCS2D01G415300 chr2B 79.032 1054 194 22 1867 2911 628208689 628207654 0.000000e+00 697.0
20 TraesCS2D01G415300 chr2B 78.471 929 161 24 2046 2937 677963715 677964641 5.280000e-159 571.0
21 TraesCS2D01G415300 chr2B 86.400 500 52 13 3685 4174 628381420 628380927 2.490000e-147 532.0
22 TraesCS2D01G415300 chr2B 80.620 387 57 13 3112 3489 775835765 775835388 2.770000e-72 283.0
23 TraesCS2D01G415300 chr2B 76.692 532 97 25 3685 4198 225698529 225699051 2.160000e-68 270.0
24 TraesCS2D01G415300 chr2B 79.455 404 53 23 3101 3489 797570031 797570419 4.670000e-65 259.0
25 TraesCS2D01G415300 chr2B 84.138 145 21 1 1098 1242 16910757 16910615 6.340000e-29 139.0
26 TraesCS2D01G415300 chr2B 83.448 145 22 1 1098 1242 16935587 16935445 2.950000e-27 134.0
27 TraesCS2D01G415300 chr2B 78.804 184 32 7 3676 3853 797570403 797570585 2.970000e-22 117.0
28 TraesCS2D01G415300 chr2B 90.805 87 6 2 4218 4303 628380922 628380837 1.070000e-21 115.0
29 TraesCS2D01G415300 chr7D 95.407 762 29 4 1 757 3871645 3872405 0.000000e+00 1208.0
30 TraesCS2D01G415300 chr7D 94.466 759 27 7 1 757 535009706 535008961 0.000000e+00 1155.0
31 TraesCS2D01G415300 chr7D 93.848 764 35 7 3 757 516708857 516708097 0.000000e+00 1140.0
32 TraesCS2D01G415300 chr7D 92.903 775 41 7 1 770 111349650 111348885 0.000000e+00 1114.0
33 TraesCS2D01G415300 chr7D 81.644 523 66 25 3686 4194 618768213 618768719 1.580000e-109 407.0
34 TraesCS2D01G415300 chr7D 95.392 217 9 1 3476 3692 406575914 406576129 1.250000e-90 344.0
35 TraesCS2D01G415300 chr5D 95.138 761 21 9 1 757 406359357 406360105 0.000000e+00 1186.0
36 TraesCS2D01G415300 chr5D 94.875 761 25 7 1 757 485041882 485042632 0.000000e+00 1177.0
37 TraesCS2D01G415300 chr5D 97.980 198 4 0 3487 3684 380089332 380089529 1.250000e-90 344.0
38 TraesCS2D01G415300 chr5D 84.000 150 22 1 1093 1242 449053594 449053741 4.900000e-30 143.0
39 TraesCS2D01G415300 chr5D 88.000 50 4 2 1370 1419 370554355 370554402 1.830000e-04 58.4
40 TraesCS2D01G415300 chr6D 94.364 763 29 8 1 757 44122600 44123354 0.000000e+00 1158.0
41 TraesCS2D01G415300 chr6D 80.952 504 74 17 3685 4180 461870347 461869858 3.430000e-101 379.0
42 TraesCS2D01G415300 chr6D 98.462 195 3 0 3490 3684 65651483 65651677 1.250000e-90 344.0
43 TraesCS2D01G415300 chr4D 93.928 774 34 7 1 770 262808966 262808202 0.000000e+00 1157.0
44 TraesCS2D01G415300 chr1B 82.231 529 72 21 3681 4194 607313582 607313061 2.010000e-118 436.0
45 TraesCS2D01G415300 chr1B 86.047 172 18 2 1093 1258 15368996 15369167 3.740000e-41 180.0
46 TraesCS2D01G415300 chr1A 81.836 523 73 19 3687 4192 541450842 541450325 2.020000e-113 420.0
47 TraesCS2D01G415300 chr1A 96.535 202 7 0 3483 3684 395172799 395173000 7.540000e-88 335.0
48 TraesCS2D01G415300 chr1A 78.805 519 85 21 3685 4189 56099368 56099875 4.540000e-85 326.0
49 TraesCS2D01G415300 chr5B 80.688 523 80 15 3687 4194 485999120 485999636 2.050000e-103 387.0
50 TraesCS2D01G415300 chr5B 98.974 195 2 0 3490 3684 61377830 61377636 2.690000e-92 350.0
51 TraesCS2D01G415300 chr5B 78.519 405 67 16 3100 3489 325960675 325960276 1.010000e-61 248.0
52 TraesCS2D01G415300 chr5B 75.264 473 79 27 4206 4655 599305888 599306345 1.730000e-44 191.0
53 TraesCS2D01G415300 chr3A 97.561 205 5 0 3490 3694 169294339 169294135 7.490000e-93 351.0
54 TraesCS2D01G415300 chr4B 81.818 429 60 16 3777 4194 466690848 466690427 1.250000e-90 344.0
55 TraesCS2D01G415300 chr4B 76.842 285 42 17 4421 4691 31865425 31865151 6.340000e-29 139.0
56 TraesCS2D01G415300 chr4B 95.161 62 2 1 1368 1429 497553557 497553617 3.870000e-16 97.1
57 TraesCS2D01G415300 chr7B 97.500 200 5 0 3490 3689 418843756 418843955 4.510000e-90 342.0
58 TraesCS2D01G415300 chr7B 80.151 398 65 8 3100 3489 122282986 122283377 7.700000e-73 285.0
59 TraesCS2D01G415300 chr7B 78.554 401 61 19 3099 3489 649407260 649406875 1.690000e-59 241.0
60 TraesCS2D01G415300 chr7A 79.684 507 76 25 3685 4169 521905992 521905491 1.620000e-89 340.0
61 TraesCS2D01G415300 chr6B 95.735 211 9 0 3483 3693 180731218 180731008 1.620000e-89 340.0
62 TraesCS2D01G415300 chr6B 80.500 400 60 12 3100 3489 123839149 123839540 1.660000e-74 291.0
63 TraesCS2D01G415300 chr6B 100.000 28 0 0 1373 1400 539738829 539738802 9.000000e-03 52.8
64 TraesCS2D01G415300 chr6B 100.000 28 0 0 4669 4696 711874525 711874552 9.000000e-03 52.8
65 TraesCS2D01G415300 chr1D 86.000 150 20 1 1093 1242 426388459 426388607 4.870000e-35 159.0
66 TraesCS2D01G415300 chr1D 85.714 147 15 5 1101 1245 416299505 416299363 2.930000e-32 150.0
67 TraesCS2D01G415300 chr4A 95.161 62 2 1 1368 1429 59483632 59483692 3.870000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G415300 chr2D 529034267 529038968 4701 True 8684.0 8684 100.000000 1 4702 1 chr2D.!!$R3 4701
1 TraesCS2D01G415300 chr2D 604126849 604127628 779 True 1149.0 1149 93.487000 1 770 1 chr2D.!!$R5 769
2 TraesCS2D01G415300 chr2D 529012649 529013709 1060 True 732.0 732 79.371000 1867 2936 1 chr2D.!!$R2 1069
3 TraesCS2D01G415300 chr2D 565858633 565859600 967 True 538.0 538 77.445000 2091 3061 1 chr2D.!!$R4 970
4 TraesCS2D01G415300 chr2A 673548055 673549925 1870 True 2290.0 2290 89.017000 1619 3488 1 chr2A.!!$R2 1869
5 TraesCS2D01G415300 chr2A 673956441 673960618 4177 True 1021.0 2013 92.126333 753 3061 3 chr2A.!!$R5 2308
6 TraesCS2D01G415300 chr2A 673512834 673513906 1072 True 715.0 715 78.880000 1867 2948 1 chr2A.!!$R1 1081
7 TraesCS2D01G415300 chr2A 705994514 705995370 856 True 593.0 593 79.655000 2091 2937 1 chr2A.!!$R3 846
8 TraesCS2D01G415300 chr2B 628397185 628400401 3216 True 1448.0 1882 90.409500 753 2921 2 chr2B.!!$R6 2168
9 TraesCS2D01G415300 chr2B 628207654 628208689 1035 True 697.0 697 79.032000 1867 2911 1 chr2B.!!$R3 1044
10 TraesCS2D01G415300 chr2B 677963715 677964641 926 False 571.0 571 78.471000 2046 2937 1 chr2B.!!$F2 891
11 TraesCS2D01G415300 chr2B 628380837 628381420 583 True 323.5 532 88.602500 3685 4303 2 chr2B.!!$R5 618
12 TraesCS2D01G415300 chr2B 225698529 225699051 522 False 270.0 270 76.692000 3685 4198 1 chr2B.!!$F1 513
13 TraesCS2D01G415300 chr7D 3871645 3872405 760 False 1208.0 1208 95.407000 1 757 1 chr7D.!!$F1 756
14 TraesCS2D01G415300 chr7D 535008961 535009706 745 True 1155.0 1155 94.466000 1 757 1 chr7D.!!$R3 756
15 TraesCS2D01G415300 chr7D 516708097 516708857 760 True 1140.0 1140 93.848000 3 757 1 chr7D.!!$R2 754
16 TraesCS2D01G415300 chr7D 111348885 111349650 765 True 1114.0 1114 92.903000 1 770 1 chr7D.!!$R1 769
17 TraesCS2D01G415300 chr7D 618768213 618768719 506 False 407.0 407 81.644000 3686 4194 1 chr7D.!!$F3 508
18 TraesCS2D01G415300 chr5D 406359357 406360105 748 False 1186.0 1186 95.138000 1 757 1 chr5D.!!$F3 756
19 TraesCS2D01G415300 chr5D 485041882 485042632 750 False 1177.0 1177 94.875000 1 757 1 chr5D.!!$F5 756
20 TraesCS2D01G415300 chr6D 44122600 44123354 754 False 1158.0 1158 94.364000 1 757 1 chr6D.!!$F1 756
21 TraesCS2D01G415300 chr4D 262808202 262808966 764 True 1157.0 1157 93.928000 1 770 1 chr4D.!!$R1 769
22 TraesCS2D01G415300 chr1B 607313061 607313582 521 True 436.0 436 82.231000 3681 4194 1 chr1B.!!$R1 513
23 TraesCS2D01G415300 chr1A 541450325 541450842 517 True 420.0 420 81.836000 3687 4192 1 chr1A.!!$R1 505
24 TraesCS2D01G415300 chr1A 56099368 56099875 507 False 326.0 326 78.805000 3685 4189 1 chr1A.!!$F1 504
25 TraesCS2D01G415300 chr5B 485999120 485999636 516 False 387.0 387 80.688000 3687 4194 1 chr5B.!!$F1 507
26 TraesCS2D01G415300 chr7A 521905491 521905992 501 True 340.0 340 79.684000 3685 4169 1 chr7A.!!$R1 484

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
641 685 2.013400 CTCGAGCTCTCTCAACTAGCA 58.987 52.381 12.85 0.0 39.30 3.49 F
1669 3823 0.036875 AGGGTCGAAAAGGAAGGCTG 59.963 55.000 0.00 0.0 0.00 4.85 F
3556 5814 0.107508 CCTACTCGTAGGGTCACCGA 60.108 60.000 14.08 0.0 46.96 4.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1897 4058 0.039074 CTCGAACACGTGAGAGCCTT 60.039 55.0 25.01 4.25 34.04 4.35 R
3597 5855 0.107410 TCGGCAAGTTAATCGGCCAT 60.107 50.0 2.24 0.00 46.75 4.40 R
4357 6780 0.606673 GAGCCCGGAAACAGAAGCTT 60.607 55.0 0.73 0.00 0.00 3.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
457 501 5.528337 ACAGGGAAAAATTATGCCACCTAT 58.472 37.500 4.82 0.00 0.00 2.57
558 602 2.104281 ACAGGCAAAGAGAACGGTTAGT 59.896 45.455 0.00 0.00 0.00 2.24
641 685 2.013400 CTCGAGCTCTCTCAACTAGCA 58.987 52.381 12.85 0.00 39.30 3.49
794 844 4.287766 AGTACAATTGTGGGAGAAGACC 57.712 45.455 21.42 0.00 0.00 3.85
795 845 3.650942 AGTACAATTGTGGGAGAAGACCA 59.349 43.478 21.42 0.00 35.14 4.02
805 855 2.440409 GGAGAAGACCACAACATGCAT 58.560 47.619 0.00 0.00 0.00 3.96
856 906 6.481976 CACATTCGCAGTTAGTCCCATAAATA 59.518 38.462 0.00 0.00 0.00 1.40
874 924 8.242053 CCATAAATAGCTTTGCATCCTTCTATG 58.758 37.037 0.00 0.00 0.00 2.23
1057 2120 4.990426 CCAAAAAGGAAAAGGTATGCACTG 59.010 41.667 0.00 0.00 41.22 3.66
1082 2145 3.519913 ACACTTCTATGGGGAGAAAGGTC 59.480 47.826 0.00 0.00 35.06 3.85
1094 2157 1.177401 GAAAGGTCTGATTGCACCCC 58.823 55.000 0.00 0.00 32.45 4.95
1131 2211 8.919145 ACACCCTCATGAACAGTAAATTAAAAA 58.081 29.630 0.00 0.00 0.00 1.94
1194 2274 2.738013 ATTCTTGCAAAGCTTCAGCC 57.262 45.000 17.94 4.54 45.70 4.85
1290 2371 2.107950 TGGATTCAACCACTAAGGCG 57.892 50.000 0.00 0.00 43.14 5.52
1462 2546 4.793201 AGCACACTTCCTTACTTTTTCCT 58.207 39.130 0.00 0.00 0.00 3.36
1511 2595 0.386352 TAGGTGAACGAGACAACGCG 60.386 55.000 3.53 3.53 44.24 6.01
1523 2607 1.927174 GACAACGCGAGCATACTCAAT 59.073 47.619 15.93 0.00 43.66 2.57
1551 2635 9.110502 GGTAGAAAAACTTATCAATAGGTGAGG 57.889 37.037 0.00 0.00 40.43 3.86
1567 2651 4.717313 GGTTCCTGGCCGACCCAC 62.717 72.222 0.00 0.00 39.18 4.61
1604 2688 1.512926 GTACAGTGAGTGTGCCCTTG 58.487 55.000 2.58 0.00 40.69 3.61
1605 2689 1.070134 GTACAGTGAGTGTGCCCTTGA 59.930 52.381 2.58 0.00 40.69 3.02
1652 3806 2.406616 CGACAAAATCCGCCCCAGG 61.407 63.158 0.00 0.00 0.00 4.45
1669 3823 0.036875 AGGGTCGAAAAGGAAGGCTG 59.963 55.000 0.00 0.00 0.00 4.85
1673 3827 2.070028 GTCGAAAAGGAAGGCTGTCTC 58.930 52.381 0.00 0.00 0.00 3.36
1736 3891 2.409948 GCCCAGATGCCTCCATATAC 57.590 55.000 0.00 0.00 0.00 1.47
1740 3895 4.728772 CCCAGATGCCTCCATATACAAAA 58.271 43.478 0.00 0.00 0.00 2.44
1742 3897 4.217118 CCAGATGCCTCCATATACAAAAGC 59.783 45.833 0.00 0.00 0.00 3.51
1788 3947 1.429930 GAAACAACCCCAACCCCAAT 58.570 50.000 0.00 0.00 0.00 3.16
2180 4349 4.024048 ACAATGACAAAGACTCGCGAATTT 60.024 37.500 11.33 9.00 0.00 1.82
2242 4423 2.190488 AAAAGGAGCGAGCTGGAGGG 62.190 60.000 0.84 0.00 0.00 4.30
2589 4815 1.142936 ACTGCCTGCCATGGATGATA 58.857 50.000 18.40 0.00 0.00 2.15
2719 4952 1.714794 GATGTGAAGACGGTGGTGAG 58.285 55.000 0.00 0.00 0.00 3.51
2722 4955 2.244695 TGTGAAGACGGTGGTGAGTAT 58.755 47.619 0.00 0.00 0.00 2.12
2762 4995 2.602878 CATCATTGCAGCAGGTTGAAC 58.397 47.619 8.36 0.00 0.00 3.18
2848 5081 5.253330 CCAAGGGTATGTTAAGCTCAAAGA 58.747 41.667 0.00 0.00 0.00 2.52
2954 5201 7.280205 AGTTTAGTGTATGCATAGTAACTTGCC 59.720 37.037 17.30 8.87 38.08 4.52
2983 5230 7.488150 TGAGTGTCTAGCTCACAAAAATATACG 59.512 37.037 16.19 0.00 37.98 3.06
2998 5245 9.104965 CAAAAATATACGAGGGTGTCAATTAGA 57.895 33.333 0.00 0.00 0.00 2.10
3031 5281 3.941483 GCTAGGCTCAGCAAATCAAAGTA 59.059 43.478 0.00 0.00 41.40 2.24
3070 5320 8.758633 TGATAGTTTAGTCTCACTAGCAAAAC 57.241 34.615 7.35 0.00 38.60 2.43
3071 5321 8.364894 TGATAGTTTAGTCTCACTAGCAAAACA 58.635 33.333 7.35 0.00 38.60 2.83
3073 5323 5.992217 AGTTTAGTCTCACTAGCAAAACAGG 59.008 40.000 0.00 0.00 31.47 4.00
3077 5327 1.210155 CACTAGCAAAACAGGCCGC 59.790 57.895 0.00 0.00 0.00 6.53
3079 5329 2.281208 TAGCAAAACAGGCCGCGT 60.281 55.556 4.92 0.00 0.00 6.01
3082 5332 2.411290 CAAAACAGGCCGCGTGTT 59.589 55.556 22.48 22.48 42.93 3.32
3084 5334 2.411504 AAAACAGGCCGCGTGTTGT 61.412 52.632 27.14 21.06 40.76 3.32
3129 5385 6.369340 TCAATTGCCATGATCACATTTTGTTC 59.631 34.615 0.00 0.00 34.15 3.18
3130 5386 5.471556 TTGCCATGATCACATTTTGTTCT 57.528 34.783 0.00 0.00 34.15 3.01
3139 5395 6.823182 TGATCACATTTTGTTCTATCACCGAT 59.177 34.615 0.00 0.00 0.00 4.18
3143 5399 9.256477 TCACATTTTGTTCTATCACCGATATAC 57.744 33.333 0.00 0.00 0.00 1.47
3160 5418 8.638873 ACCGATATACACTATCACTCATTTTCA 58.361 33.333 0.00 0.00 0.00 2.69
3211 5469 9.696917 ATCCTGAACATTTTAAAACTCATGAAC 57.303 29.630 1.97 0.00 0.00 3.18
3212 5470 8.141268 TCCTGAACATTTTAAAACTCATGAACC 58.859 33.333 1.97 0.00 0.00 3.62
3213 5471 8.143835 CCTGAACATTTTAAAACTCATGAACCT 58.856 33.333 1.97 0.00 0.00 3.50
3214 5472 9.185192 CTGAACATTTTAAAACTCATGAACCTC 57.815 33.333 1.97 0.00 0.00 3.85
3215 5473 8.912988 TGAACATTTTAAAACTCATGAACCTCT 58.087 29.630 1.97 0.00 0.00 3.69
3216 5474 9.399403 GAACATTTTAAAACTCATGAACCTCTC 57.601 33.333 1.97 0.00 0.00 3.20
3217 5475 8.697507 ACATTTTAAAACTCATGAACCTCTCT 57.302 30.769 1.97 0.00 0.00 3.10
3218 5476 8.571336 ACATTTTAAAACTCATGAACCTCTCTG 58.429 33.333 1.97 0.00 0.00 3.35
3219 5477 8.786898 CATTTTAAAACTCATGAACCTCTCTGA 58.213 33.333 1.97 0.00 0.00 3.27
3220 5478 8.746052 TTTTAAAACTCATGAACCTCTCTGAA 57.254 30.769 0.00 0.00 0.00 3.02
3221 5479 8.746052 TTTAAAACTCATGAACCTCTCTGAAA 57.254 30.769 0.00 0.00 0.00 2.69
3222 5480 8.924511 TTAAAACTCATGAACCTCTCTGAAAT 57.075 30.769 0.00 0.00 0.00 2.17
3223 5481 7.446001 AAAACTCATGAACCTCTCTGAAATC 57.554 36.000 0.00 0.00 0.00 2.17
3224 5482 4.753233 ACTCATGAACCTCTCTGAAATCG 58.247 43.478 0.00 0.00 0.00 3.34
3225 5483 4.221703 ACTCATGAACCTCTCTGAAATCGT 59.778 41.667 0.00 0.00 0.00 3.73
3226 5484 4.498241 TCATGAACCTCTCTGAAATCGTG 58.502 43.478 0.00 0.00 0.00 4.35
3227 5485 4.220602 TCATGAACCTCTCTGAAATCGTGA 59.779 41.667 0.00 0.00 32.17 4.35
3228 5486 4.600692 TGAACCTCTCTGAAATCGTGAA 57.399 40.909 0.00 0.00 0.00 3.18
3229 5487 4.307432 TGAACCTCTCTGAAATCGTGAAC 58.693 43.478 0.00 0.00 0.00 3.18
3230 5488 4.202212 TGAACCTCTCTGAAATCGTGAACA 60.202 41.667 0.00 0.00 0.00 3.18
3231 5489 4.543590 ACCTCTCTGAAATCGTGAACAT 57.456 40.909 0.00 0.00 0.00 2.71
3232 5490 4.899502 ACCTCTCTGAAATCGTGAACATT 58.100 39.130 0.00 0.00 0.00 2.71
3233 5491 5.308825 ACCTCTCTGAAATCGTGAACATTT 58.691 37.500 0.00 0.00 0.00 2.32
3234 5492 5.765182 ACCTCTCTGAAATCGTGAACATTTT 59.235 36.000 0.00 0.00 0.00 1.82
3235 5493 6.263168 ACCTCTCTGAAATCGTGAACATTTTT 59.737 34.615 0.00 0.00 0.00 1.94
3236 5494 7.444183 ACCTCTCTGAAATCGTGAACATTTTTA 59.556 33.333 0.00 0.00 0.00 1.52
3237 5495 8.454106 CCTCTCTGAAATCGTGAACATTTTTAT 58.546 33.333 0.00 0.00 0.00 1.40
3238 5496 9.270576 CTCTCTGAAATCGTGAACATTTTTATG 57.729 33.333 0.00 0.00 0.00 1.90
3239 5497 8.236586 TCTCTGAAATCGTGAACATTTTTATGG 58.763 33.333 0.00 0.00 0.00 2.74
3240 5498 8.105097 TCTGAAATCGTGAACATTTTTATGGA 57.895 30.769 0.00 0.00 0.00 3.41
3241 5499 8.739039 TCTGAAATCGTGAACATTTTTATGGAT 58.261 29.630 0.00 0.00 0.00 3.41
3242 5500 9.357652 CTGAAATCGTGAACATTTTTATGGATT 57.642 29.630 0.00 0.00 0.00 3.01
3243 5501 9.703892 TGAAATCGTGAACATTTTTATGGATTT 57.296 25.926 0.00 0.00 0.00 2.17
3246 5504 7.789341 TCGTGAACATTTTTATGGATTTTCG 57.211 32.000 0.00 0.00 0.00 3.46
3247 5505 7.585867 TCGTGAACATTTTTATGGATTTTCGA 58.414 30.769 0.00 0.00 0.00 3.71
3248 5506 8.076781 TCGTGAACATTTTTATGGATTTTCGAA 58.923 29.630 0.00 0.00 0.00 3.71
3249 5507 8.153411 CGTGAACATTTTTATGGATTTTCGAAC 58.847 33.333 0.00 0.00 0.00 3.95
3250 5508 8.973378 GTGAACATTTTTATGGATTTTCGAACA 58.027 29.630 0.00 0.00 0.00 3.18
3251 5509 9.703892 TGAACATTTTTATGGATTTTCGAACAT 57.296 25.926 0.00 0.00 0.00 2.71
3254 5512 9.927668 ACATTTTTATGGATTTTCGAACATTCT 57.072 25.926 0.00 0.00 0.00 2.40
3263 5521 9.008965 TGGATTTTCGAACATTCTCTAAAATCA 57.991 29.630 22.06 13.86 38.49 2.57
3372 5630 7.905604 ATGTGAACATTTCTAGAATCAACGA 57.094 32.000 5.89 0.00 31.37 3.85
3373 5631 7.722795 TGTGAACATTTCTAGAATCAACGAA 57.277 32.000 5.89 0.00 0.00 3.85
3374 5632 7.572759 TGTGAACATTTCTAGAATCAACGAAC 58.427 34.615 5.89 1.49 0.00 3.95
3375 5633 7.225734 TGTGAACATTTCTAGAATCAACGAACA 59.774 33.333 5.89 3.97 0.00 3.18
3376 5634 8.230486 GTGAACATTTCTAGAATCAACGAACAT 58.770 33.333 5.89 0.00 0.00 2.71
3377 5635 9.430623 TGAACATTTCTAGAATCAACGAACATA 57.569 29.630 5.89 0.00 0.00 2.29
3403 5661 6.485830 TTTTGGATATTGTTTGGTGGAACA 57.514 33.333 0.00 0.00 39.98 3.18
3404 5662 6.678568 TTTGGATATTGTTTGGTGGAACAT 57.321 33.333 0.00 0.00 44.52 2.71
3405 5663 6.678568 TTGGATATTGTTTGGTGGAACATT 57.321 33.333 0.00 0.00 44.52 2.71
3406 5664 6.678568 TGGATATTGTTTGGTGGAACATTT 57.321 33.333 0.00 0.00 44.52 2.32
3407 5665 7.072263 TGGATATTGTTTGGTGGAACATTTT 57.928 32.000 0.00 0.00 44.52 1.82
3408 5666 7.512992 TGGATATTGTTTGGTGGAACATTTTT 58.487 30.769 0.00 0.00 44.52 1.94
3490 5748 7.887996 TTTGAATCAGTGAACATTTTATGCC 57.112 32.000 0.00 0.00 0.00 4.40
3491 5749 5.964758 TGAATCAGTGAACATTTTATGCCC 58.035 37.500 0.00 0.00 0.00 5.36
3492 5750 5.716228 TGAATCAGTGAACATTTTATGCCCT 59.284 36.000 0.00 0.00 0.00 5.19
3493 5751 5.587388 ATCAGTGAACATTTTATGCCCTG 57.413 39.130 0.00 0.00 0.00 4.45
3494 5752 4.406456 TCAGTGAACATTTTATGCCCTGT 58.594 39.130 0.00 0.00 0.00 4.00
3495 5753 4.832266 TCAGTGAACATTTTATGCCCTGTT 59.168 37.500 0.00 0.00 34.68 3.16
3496 5754 5.048083 TCAGTGAACATTTTATGCCCTGTTC 60.048 40.000 7.20 7.20 44.82 3.18
3500 5758 6.024552 GAACATTTTATGCCCTGTTCAAGA 57.975 37.500 8.87 0.00 44.28 3.02
3501 5759 6.418057 AACATTTTATGCCCTGTTCAAGAA 57.582 33.333 0.00 0.00 0.00 2.52
3502 5760 6.610075 ACATTTTATGCCCTGTTCAAGAAT 57.390 33.333 0.00 0.00 0.00 2.40
3503 5761 7.008021 ACATTTTATGCCCTGTTCAAGAATT 57.992 32.000 0.00 0.00 0.00 2.17
3504 5762 7.099120 ACATTTTATGCCCTGTTCAAGAATTC 58.901 34.615 0.00 0.00 0.00 2.17
3505 5763 6.662865 TTTTATGCCCTGTTCAAGAATTCA 57.337 33.333 8.44 0.00 0.00 2.57
3506 5764 6.855763 TTTATGCCCTGTTCAAGAATTCAT 57.144 33.333 8.44 0.00 0.00 2.57
3507 5765 4.996788 ATGCCCTGTTCAAGAATTCATC 57.003 40.909 8.44 0.00 0.00 2.92
3508 5766 3.091545 TGCCCTGTTCAAGAATTCATCC 58.908 45.455 8.44 0.00 0.00 3.51
3509 5767 2.098117 GCCCTGTTCAAGAATTCATCCG 59.902 50.000 8.44 0.00 0.00 4.18
3510 5768 3.609853 CCCTGTTCAAGAATTCATCCGA 58.390 45.455 8.44 0.00 0.00 4.55
3511 5769 4.202441 CCCTGTTCAAGAATTCATCCGAT 58.798 43.478 8.44 0.00 0.00 4.18
3512 5770 4.641989 CCCTGTTCAAGAATTCATCCGATT 59.358 41.667 8.44 0.00 0.00 3.34
3513 5771 5.822519 CCCTGTTCAAGAATTCATCCGATTA 59.177 40.000 8.44 0.00 0.00 1.75
3514 5772 6.318648 CCCTGTTCAAGAATTCATCCGATTAA 59.681 38.462 8.44 0.00 0.00 1.40
3515 5773 7.189512 CCTGTTCAAGAATTCATCCGATTAAC 58.810 38.462 8.44 1.74 0.00 2.01
3516 5774 7.083875 TGTTCAAGAATTCATCCGATTAACC 57.916 36.000 8.44 0.00 0.00 2.85
3517 5775 6.657117 TGTTCAAGAATTCATCCGATTAACCA 59.343 34.615 8.44 0.00 0.00 3.67
3518 5776 6.925610 TCAAGAATTCATCCGATTAACCAG 57.074 37.500 8.44 0.00 0.00 4.00
3519 5777 6.414732 TCAAGAATTCATCCGATTAACCAGT 58.585 36.000 8.44 0.00 0.00 4.00
3520 5778 6.884295 TCAAGAATTCATCCGATTAACCAGTT 59.116 34.615 8.44 0.00 0.00 3.16
3521 5779 8.044309 TCAAGAATTCATCCGATTAACCAGTTA 58.956 33.333 8.44 0.00 0.00 2.24
3522 5780 8.673711 CAAGAATTCATCCGATTAACCAGTTAA 58.326 33.333 8.44 5.51 39.12 2.01
3523 5781 8.209917 AGAATTCATCCGATTAACCAGTTAAC 57.790 34.615 8.44 0.00 37.80 2.01
3524 5782 8.047310 AGAATTCATCCGATTAACCAGTTAACT 58.953 33.333 8.44 1.12 37.80 2.24
3525 5783 8.575649 AATTCATCCGATTAACCAGTTAACTT 57.424 30.769 5.07 0.00 37.80 2.66
3526 5784 6.978343 TCATCCGATTAACCAGTTAACTTG 57.022 37.500 5.07 5.14 37.80 3.16
3527 5785 5.353123 TCATCCGATTAACCAGTTAACTTGC 59.647 40.000 5.07 0.00 37.80 4.01
3528 5786 4.004982 TCCGATTAACCAGTTAACTTGCC 58.995 43.478 5.07 0.00 37.80 4.52
3529 5787 3.181514 CCGATTAACCAGTTAACTTGCCG 60.182 47.826 5.07 3.31 37.80 5.69
3530 5788 3.680937 CGATTAACCAGTTAACTTGCCGA 59.319 43.478 5.07 0.00 37.80 5.54
3531 5789 4.331717 CGATTAACCAGTTAACTTGCCGAT 59.668 41.667 5.07 0.00 37.80 4.18
3532 5790 5.163794 CGATTAACCAGTTAACTTGCCGATT 60.164 40.000 5.07 0.00 37.80 3.34
3533 5791 6.036300 CGATTAACCAGTTAACTTGCCGATTA 59.964 38.462 5.07 0.00 37.80 1.75
3534 5792 7.413219 CGATTAACCAGTTAACTTGCCGATTAA 60.413 37.037 5.07 4.36 37.80 1.40
3535 5793 7.690952 TTAACCAGTTAACTTGCCGATTAAT 57.309 32.000 5.07 0.00 30.78 1.40
3536 5794 5.813080 ACCAGTTAACTTGCCGATTAATC 57.187 39.130 5.07 5.30 0.00 1.75
3537 5795 4.638865 ACCAGTTAACTTGCCGATTAATCC 59.361 41.667 5.07 0.00 0.00 3.01
3538 5796 4.036380 CCAGTTAACTTGCCGATTAATCCC 59.964 45.833 5.07 2.26 0.00 3.85
3539 5797 4.881850 CAGTTAACTTGCCGATTAATCCCT 59.118 41.667 5.07 0.00 0.00 4.20
3540 5798 6.053005 CAGTTAACTTGCCGATTAATCCCTA 58.947 40.000 5.07 0.00 0.00 3.53
3541 5799 6.018180 CAGTTAACTTGCCGATTAATCCCTAC 60.018 42.308 5.07 0.00 0.00 3.18
3542 5800 4.772886 AACTTGCCGATTAATCCCTACT 57.227 40.909 9.87 0.00 0.00 2.57
3543 5801 4.338379 ACTTGCCGATTAATCCCTACTC 57.662 45.455 9.87 0.00 0.00 2.59
3544 5802 3.243771 ACTTGCCGATTAATCCCTACTCG 60.244 47.826 9.87 0.00 33.64 4.18
3545 5803 2.313317 TGCCGATTAATCCCTACTCGT 58.687 47.619 9.87 0.00 32.34 4.18
3546 5804 3.489355 TGCCGATTAATCCCTACTCGTA 58.511 45.455 9.87 0.00 32.34 3.43
3547 5805 3.504906 TGCCGATTAATCCCTACTCGTAG 59.495 47.826 9.87 0.00 32.34 3.51
3555 5813 2.401967 CCTACTCGTAGGGTCACCG 58.598 63.158 14.08 0.00 46.96 4.94
3556 5814 0.107508 CCTACTCGTAGGGTCACCGA 60.108 60.000 14.08 0.00 46.96 4.69
3558 5816 4.315588 CTCGTAGGGTCACCGAGT 57.684 61.111 0.00 0.00 42.26 4.18
3559 5817 3.465990 CTCGTAGGGTCACCGAGTA 57.534 57.895 0.00 0.00 42.26 2.59
3560 5818 1.297664 CTCGTAGGGTCACCGAGTAG 58.702 60.000 0.00 0.00 42.26 2.57
3561 5819 0.745845 TCGTAGGGTCACCGAGTAGC 60.746 60.000 0.00 0.00 43.47 3.58
3562 5820 1.722636 CGTAGGGTCACCGAGTAGCC 61.723 65.000 0.00 0.00 43.47 3.93
3563 5821 1.452651 TAGGGTCACCGAGTAGCCG 60.453 63.158 0.00 0.00 43.47 5.52
3564 5822 1.913951 TAGGGTCACCGAGTAGCCGA 61.914 60.000 0.00 0.00 43.47 5.54
3565 5823 2.125961 GGGTCACCGAGTAGCCGAT 61.126 63.158 0.00 0.00 0.00 4.18
3566 5824 1.673808 GGGTCACCGAGTAGCCGATT 61.674 60.000 0.00 0.00 0.00 3.34
3567 5825 1.027357 GGTCACCGAGTAGCCGATTA 58.973 55.000 0.00 0.00 0.00 1.75
3568 5826 1.406539 GGTCACCGAGTAGCCGATTAA 59.593 52.381 0.00 0.00 0.00 1.40
3569 5827 2.457970 GTCACCGAGTAGCCGATTAAC 58.542 52.381 0.00 0.00 0.00 2.01
3570 5828 1.406539 TCACCGAGTAGCCGATTAACC 59.593 52.381 0.00 0.00 0.00 2.85
3571 5829 0.383231 ACCGAGTAGCCGATTAACCG 59.617 55.000 0.00 0.00 0.00 4.44
3572 5830 0.664761 CCGAGTAGCCGATTAACCGA 59.335 55.000 0.00 0.00 0.00 4.69
3573 5831 1.268899 CCGAGTAGCCGATTAACCGAT 59.731 52.381 0.00 0.00 0.00 4.18
3574 5832 2.288030 CCGAGTAGCCGATTAACCGATT 60.288 50.000 0.00 0.00 0.00 3.34
3575 5833 3.058016 CCGAGTAGCCGATTAACCGATTA 60.058 47.826 0.00 0.00 0.00 1.75
3576 5834 4.539870 CGAGTAGCCGATTAACCGATTAA 58.460 43.478 0.00 0.00 34.78 1.40
3577 5835 5.159209 CGAGTAGCCGATTAACCGATTAAT 58.841 41.667 0.00 0.00 42.55 1.40
3586 5844 4.741321 TTAACCGATTAATCACCCGAGT 57.259 40.909 15.57 0.35 0.00 4.18
3587 5845 5.850557 TTAACCGATTAATCACCCGAGTA 57.149 39.130 15.57 0.00 0.00 2.59
3588 5846 4.741321 AACCGATTAATCACCCGAGTAA 57.259 40.909 15.57 0.00 36.24 2.24
3589 5847 4.950205 ACCGATTAATCACCCGAGTAAT 57.050 40.909 15.57 0.00 43.26 1.89
3590 5848 5.286267 ACCGATTAATCACCCGAGTAATT 57.714 39.130 15.57 0.00 41.27 1.40
3591 5849 5.054477 ACCGATTAATCACCCGAGTAATTG 58.946 41.667 15.57 0.00 41.27 2.32
3592 5850 5.163385 ACCGATTAATCACCCGAGTAATTGA 60.163 40.000 15.57 0.00 42.42 2.57
3593 5851 5.932303 CCGATTAATCACCCGAGTAATTGAT 59.068 40.000 15.57 0.00 42.42 2.57
3594 5852 6.426937 CCGATTAATCACCCGAGTAATTGATT 59.573 38.462 15.57 0.00 42.42 2.57
3595 5853 7.601130 CCGATTAATCACCCGAGTAATTGATTA 59.399 37.037 15.57 0.00 42.42 1.75
3596 5854 8.984764 CGATTAATCACCCGAGTAATTGATTAA 58.015 33.333 15.57 14.66 46.86 1.40
3600 5858 6.935741 TCACCCGAGTAATTGATTAAATGG 57.064 37.500 0.00 0.00 0.00 3.16
3601 5859 5.298276 TCACCCGAGTAATTGATTAAATGGC 59.702 40.000 0.00 0.00 0.00 4.40
3602 5860 4.583073 ACCCGAGTAATTGATTAAATGGCC 59.417 41.667 0.00 0.00 0.00 5.36
3603 5861 4.320202 CCCGAGTAATTGATTAAATGGCCG 60.320 45.833 0.00 0.00 0.00 6.13
3604 5862 4.513692 CCGAGTAATTGATTAAATGGCCGA 59.486 41.667 0.00 0.00 0.00 5.54
3605 5863 5.181245 CCGAGTAATTGATTAAATGGCCGAT 59.819 40.000 0.00 0.00 0.00 4.18
3606 5864 6.293955 CCGAGTAATTGATTAAATGGCCGATT 60.294 38.462 0.00 0.00 0.00 3.34
3607 5865 7.094975 CCGAGTAATTGATTAAATGGCCGATTA 60.095 37.037 0.00 0.00 0.00 1.75
3608 5866 8.286800 CGAGTAATTGATTAAATGGCCGATTAA 58.713 33.333 13.33 13.33 0.00 1.40
3609 5867 9.394477 GAGTAATTGATTAAATGGCCGATTAAC 57.606 33.333 13.26 9.13 0.00 2.01
3610 5868 9.131791 AGTAATTGATTAAATGGCCGATTAACT 57.868 29.630 13.26 4.52 0.00 2.24
3611 5869 9.744468 GTAATTGATTAAATGGCCGATTAACTT 57.256 29.630 13.26 8.56 0.00 2.66
3612 5870 8.647143 AATTGATTAAATGGCCGATTAACTTG 57.353 30.769 13.26 0.00 0.00 3.16
3613 5871 5.587289 TGATTAAATGGCCGATTAACTTGC 58.413 37.500 13.26 6.21 0.00 4.01
3614 5872 2.959507 AAATGGCCGATTAACTTGCC 57.040 45.000 0.00 4.44 44.27 4.52
3616 5874 4.211986 GGCCGATTAACTTGCCGA 57.788 55.556 0.00 0.00 33.59 5.54
3617 5875 2.702847 GGCCGATTAACTTGCCGAT 58.297 52.632 0.00 0.00 33.59 4.18
3618 5876 1.021968 GGCCGATTAACTTGCCGATT 58.978 50.000 0.00 0.00 33.59 3.34
3619 5877 2.215196 GGCCGATTAACTTGCCGATTA 58.785 47.619 0.00 0.00 33.59 1.75
3620 5878 2.223377 GGCCGATTAACTTGCCGATTAG 59.777 50.000 0.00 0.00 33.59 1.73
3621 5879 2.349532 GCCGATTAACTTGCCGATTAGC 60.350 50.000 0.00 0.00 0.00 3.09
3622 5880 2.223377 CCGATTAACTTGCCGATTAGCC 59.777 50.000 0.00 0.00 0.00 3.93
3623 5881 3.131396 CGATTAACTTGCCGATTAGCCT 58.869 45.455 0.00 0.00 0.00 4.58
3624 5882 4.304110 CGATTAACTTGCCGATTAGCCTA 58.696 43.478 0.00 0.00 0.00 3.93
3625 5883 4.929808 CGATTAACTTGCCGATTAGCCTAT 59.070 41.667 0.00 0.00 0.00 2.57
3626 5884 5.408604 CGATTAACTTGCCGATTAGCCTATT 59.591 40.000 0.00 0.00 0.00 1.73
3627 5885 6.588756 CGATTAACTTGCCGATTAGCCTATTA 59.411 38.462 0.00 0.00 0.00 0.98
3628 5886 7.117236 CGATTAACTTGCCGATTAGCCTATTAA 59.883 37.037 0.00 0.00 0.00 1.40
3629 5887 8.863872 ATTAACTTGCCGATTAGCCTATTAAT 57.136 30.769 0.00 0.00 0.00 1.40
3630 5888 6.803154 AACTTGCCGATTAGCCTATTAATC 57.197 37.500 0.00 0.00 36.92 1.75
3631 5889 5.246307 ACTTGCCGATTAGCCTATTAATCC 58.754 41.667 0.00 0.00 36.93 3.01
3632 5890 4.216411 TGCCGATTAGCCTATTAATCCC 57.784 45.455 0.00 0.00 36.93 3.85
3633 5891 3.054655 TGCCGATTAGCCTATTAATCCCC 60.055 47.826 0.00 0.00 36.93 4.81
3634 5892 3.200165 GCCGATTAGCCTATTAATCCCCT 59.800 47.826 0.00 0.00 36.93 4.79
3635 5893 4.407945 GCCGATTAGCCTATTAATCCCCTA 59.592 45.833 0.00 0.00 36.93 3.53
3636 5894 5.684291 GCCGATTAGCCTATTAATCCCCTAC 60.684 48.000 0.00 0.00 36.93 3.18
3637 5895 5.661759 CCGATTAGCCTATTAATCCCCTACT 59.338 44.000 0.00 0.00 36.93 2.57
3638 5896 6.183360 CCGATTAGCCTATTAATCCCCTACTC 60.183 46.154 0.00 0.00 36.93 2.59
3639 5897 6.459848 CGATTAGCCTATTAATCCCCTACTCG 60.460 46.154 0.00 3.50 36.93 4.18
3640 5898 2.832733 AGCCTATTAATCCCCTACTCGC 59.167 50.000 0.00 0.00 0.00 5.03
3641 5899 2.093606 GCCTATTAATCCCCTACTCGCC 60.094 54.545 0.00 0.00 0.00 5.54
3642 5900 3.170717 CCTATTAATCCCCTACTCGCCA 58.829 50.000 0.00 0.00 0.00 5.69
3643 5901 3.195825 CCTATTAATCCCCTACTCGCCAG 59.804 52.174 0.00 0.00 0.00 4.85
3644 5902 0.756903 TTAATCCCCTACTCGCCAGC 59.243 55.000 0.00 0.00 0.00 4.85
3645 5903 1.119574 TAATCCCCTACTCGCCAGCC 61.120 60.000 0.00 0.00 0.00 4.85
3646 5904 3.696518 ATCCCCTACTCGCCAGCCA 62.697 63.158 0.00 0.00 0.00 4.75
3647 5905 3.399181 CCCCTACTCGCCAGCCAA 61.399 66.667 0.00 0.00 0.00 4.52
3648 5906 2.125106 CCCTACTCGCCAGCCAAC 60.125 66.667 0.00 0.00 0.00 3.77
3649 5907 2.125106 CCTACTCGCCAGCCAACC 60.125 66.667 0.00 0.00 0.00 3.77
3650 5908 2.509336 CTACTCGCCAGCCAACCG 60.509 66.667 0.00 0.00 0.00 4.44
3651 5909 2.992689 TACTCGCCAGCCAACCGA 60.993 61.111 0.00 0.00 0.00 4.69
3657 5915 4.711949 CCAGCCAACCGAGCAGCT 62.712 66.667 0.00 0.00 35.52 4.24
3658 5916 2.265739 CAGCCAACCGAGCAGCTA 59.734 61.111 0.00 0.00 33.33 3.32
3659 5917 1.153289 CAGCCAACCGAGCAGCTAT 60.153 57.895 0.00 0.00 33.33 2.97
3660 5918 1.144936 AGCCAACCGAGCAGCTATC 59.855 57.895 0.00 0.00 32.73 2.08
3661 5919 1.153369 GCCAACCGAGCAGCTATCA 60.153 57.895 0.00 0.00 0.00 2.15
3662 5920 1.156645 GCCAACCGAGCAGCTATCAG 61.157 60.000 0.00 0.00 0.00 2.90
3663 5921 0.176680 CCAACCGAGCAGCTATCAGT 59.823 55.000 0.00 0.00 0.00 3.41
3664 5922 1.406069 CCAACCGAGCAGCTATCAGTT 60.406 52.381 0.00 0.00 0.00 3.16
3665 5923 2.159099 CCAACCGAGCAGCTATCAGTTA 60.159 50.000 0.00 0.00 0.00 2.24
3666 5924 3.521560 CAACCGAGCAGCTATCAGTTAA 58.478 45.455 0.00 0.00 0.00 2.01
3667 5925 3.166489 ACCGAGCAGCTATCAGTTAAC 57.834 47.619 0.00 0.00 0.00 2.01
3668 5926 2.120232 CCGAGCAGCTATCAGTTAACG 58.880 52.381 0.00 0.00 0.00 3.18
3669 5927 2.223502 CCGAGCAGCTATCAGTTAACGA 60.224 50.000 0.00 1.38 0.00 3.85
3670 5928 3.551046 CCGAGCAGCTATCAGTTAACGAT 60.551 47.826 14.38 14.38 0.00 3.73
3671 5929 4.045104 CGAGCAGCTATCAGTTAACGATT 58.955 43.478 14.93 1.57 0.00 3.34
3672 5930 4.504461 CGAGCAGCTATCAGTTAACGATTT 59.496 41.667 14.93 0.06 0.00 2.17
3673 5931 5.331905 CGAGCAGCTATCAGTTAACGATTTC 60.332 44.000 14.93 9.32 0.00 2.17
3674 5932 4.811557 AGCAGCTATCAGTTAACGATTTCC 59.188 41.667 14.93 7.12 0.00 3.13
3675 5933 4.811557 GCAGCTATCAGTTAACGATTTCCT 59.188 41.667 14.93 8.62 0.00 3.36
3676 5934 5.050702 GCAGCTATCAGTTAACGATTTCCTC 60.051 44.000 14.93 3.70 0.00 3.71
3677 5935 6.042777 CAGCTATCAGTTAACGATTTCCTCA 58.957 40.000 14.93 0.64 0.00 3.86
3678 5936 6.535150 CAGCTATCAGTTAACGATTTCCTCAA 59.465 38.462 14.93 0.11 0.00 3.02
3679 5937 6.535508 AGCTATCAGTTAACGATTTCCTCAAC 59.464 38.462 14.93 0.00 0.00 3.18
3680 5938 6.312918 GCTATCAGTTAACGATTTCCTCAACA 59.687 38.462 14.93 0.00 0.00 3.33
3681 5939 7.148474 GCTATCAGTTAACGATTTCCTCAACAA 60.148 37.037 14.93 0.00 0.00 2.83
3682 5940 7.687941 ATCAGTTAACGATTTCCTCAACAAT 57.312 32.000 0.00 0.00 0.00 2.71
3683 5941 6.898041 TCAGTTAACGATTTCCTCAACAATG 58.102 36.000 0.00 0.00 0.00 2.82
3853 6144 6.423604 ACATGTTTTGATTTCCCGAACATTTC 59.576 34.615 0.00 0.00 38.48 2.17
4157 6578 2.140792 TCGGCCTAGGCAGGGAATC 61.141 63.158 34.09 14.50 42.88 2.52
4159 6580 1.772156 GGCCTAGGCAGGGAATCCT 60.772 63.158 34.09 0.00 46.26 3.24
4195 6618 4.699925 TTTTATCGCTTATAGGTGGCCT 57.300 40.909 3.32 0.00 37.71 5.19
4196 6619 3.678056 TTATCGCTTATAGGTGGCCTG 57.322 47.619 3.32 0.00 34.61 4.85
4199 6622 1.456287 GCTTATAGGTGGCCTGGGG 59.544 63.158 3.32 0.00 34.61 4.96
4200 6623 2.069165 GCTTATAGGTGGCCTGGGGG 62.069 65.000 3.32 0.00 34.61 5.40
4201 6624 0.401395 CTTATAGGTGGCCTGGGGGA 60.401 60.000 3.32 0.00 34.61 4.81
4202 6625 0.401395 TTATAGGTGGCCTGGGGGAG 60.401 60.000 3.32 0.00 34.61 4.30
4203 6626 2.983706 TATAGGTGGCCTGGGGGAGC 62.984 65.000 3.32 0.00 34.61 4.70
4208 6631 4.499116 GGCCTGGGGGAGCTCCTA 62.499 72.222 31.36 17.10 35.95 2.94
4209 6632 2.366972 GCCTGGGGGAGCTCCTAA 60.367 66.667 31.36 16.25 35.95 2.69
4210 6633 2.447714 GCCTGGGGGAGCTCCTAAG 61.448 68.421 31.36 23.50 35.95 2.18
4211 6634 1.003573 CCTGGGGGAGCTCCTAAGT 59.996 63.158 31.36 0.00 35.95 2.24
4212 6635 1.341156 CCTGGGGGAGCTCCTAAGTG 61.341 65.000 31.36 17.17 35.95 3.16
4213 6636 1.306997 TGGGGGAGCTCCTAAGTGG 60.307 63.158 31.36 0.00 35.95 4.00
4214 6637 2.747443 GGGGGAGCTCCTAAGTGGC 61.747 68.421 31.36 13.25 35.95 5.01
4215 6638 2.501610 GGGAGCTCCTAAGTGGCG 59.498 66.667 31.36 0.00 35.95 5.69
4216 6639 2.202946 GGAGCTCCTAAGTGGCGC 60.203 66.667 26.25 0.00 46.39 6.53
4264 6687 2.516225 AAGCGCGCCCCCTTAATC 60.516 61.111 30.33 0.00 0.00 1.75
4267 6690 4.540735 CGCGCCCCCTTAATCGGT 62.541 66.667 0.00 0.00 0.00 4.69
4275 6698 1.450211 CCTTAATCGGTCGGCCCAT 59.550 57.895 0.00 0.00 0.00 4.00
4276 6699 0.602905 CCTTAATCGGTCGGCCCATC 60.603 60.000 0.00 0.00 0.00 3.51
4277 6700 0.944311 CTTAATCGGTCGGCCCATCG 60.944 60.000 0.00 0.00 0.00 3.84
4279 6702 2.358193 TAATCGGTCGGCCCATCGTG 62.358 60.000 2.06 0.00 0.00 4.35
4311 6734 4.029809 CCCCGGCTTCCCTTCGTT 62.030 66.667 0.00 0.00 0.00 3.85
4312 6735 2.436115 CCCGGCTTCCCTTCGTTC 60.436 66.667 0.00 0.00 0.00 3.95
4313 6736 2.813908 CCGGCTTCCCTTCGTTCG 60.814 66.667 0.00 0.00 0.00 3.95
4314 6737 2.048503 CGGCTTCCCTTCGTTCGT 60.049 61.111 0.00 0.00 0.00 3.85
4315 6738 1.666872 CGGCTTCCCTTCGTTCGTT 60.667 57.895 0.00 0.00 0.00 3.85
4316 6739 1.623973 CGGCTTCCCTTCGTTCGTTC 61.624 60.000 0.00 0.00 0.00 3.95
4317 6740 1.623973 GGCTTCCCTTCGTTCGTTCG 61.624 60.000 0.00 0.00 0.00 3.95
4318 6741 1.779683 CTTCCCTTCGTTCGTTCGC 59.220 57.895 0.00 0.00 0.00 4.70
4319 6742 0.666577 CTTCCCTTCGTTCGTTCGCT 60.667 55.000 0.00 0.00 0.00 4.93
4320 6743 0.665369 TTCCCTTCGTTCGTTCGCTC 60.665 55.000 0.00 0.00 0.00 5.03
4321 6744 2.434134 CCCTTCGTTCGTTCGCTCG 61.434 63.158 0.00 0.00 0.00 5.03
4322 6745 2.386868 CTTCGTTCGTTCGCTCGC 59.613 61.111 0.00 0.00 0.00 5.03
4323 6746 2.050714 TTCGTTCGTTCGCTCGCT 60.051 55.556 0.00 0.00 0.00 4.93
4324 6747 1.988696 CTTCGTTCGTTCGCTCGCTC 61.989 60.000 0.00 0.00 0.00 5.03
4325 6748 3.876162 CGTTCGTTCGCTCGCTCG 61.876 66.667 0.00 0.00 0.00 5.03
4326 6749 2.501222 GTTCGTTCGCTCGCTCGA 60.501 61.111 5.07 5.07 36.60 4.04
4327 6750 1.868251 GTTCGTTCGCTCGCTCGAT 60.868 57.895 8.64 0.00 38.37 3.59
4328 6751 1.582937 TTCGTTCGCTCGCTCGATC 60.583 57.895 8.64 0.00 38.37 3.69
4329 6752 2.248274 TTCGTTCGCTCGCTCGATCA 62.248 55.000 0.00 0.00 38.37 2.92
4330 6753 1.867812 CGTTCGCTCGCTCGATCAA 60.868 57.895 0.00 0.00 38.37 2.57
4331 6754 1.626388 GTTCGCTCGCTCGATCAAC 59.374 57.895 0.00 0.00 38.37 3.18
4332 6755 0.798771 GTTCGCTCGCTCGATCAACT 60.799 55.000 0.00 0.00 38.37 3.16
4333 6756 0.730840 TTCGCTCGCTCGATCAACTA 59.269 50.000 0.00 0.00 38.37 2.24
4334 6757 0.305009 TCGCTCGCTCGATCAACTAG 59.695 55.000 0.00 0.00 33.02 2.57
4335 6758 0.658829 CGCTCGCTCGATCAACTAGG 60.659 60.000 0.00 0.00 0.00 3.02
4336 6759 0.318275 GCTCGCTCGATCAACTAGGG 60.318 60.000 0.00 0.00 0.00 3.53
4337 6760 1.025812 CTCGCTCGATCAACTAGGGT 58.974 55.000 0.00 0.00 0.00 4.34
4338 6761 1.405821 CTCGCTCGATCAACTAGGGTT 59.594 52.381 0.00 0.00 35.86 4.11
4348 6771 3.733443 CAACTAGGGTTGCTTGCTTTT 57.267 42.857 0.00 0.00 44.83 2.27
4349 6772 4.058721 CAACTAGGGTTGCTTGCTTTTT 57.941 40.909 0.00 0.00 44.83 1.94
4370 6793 4.584327 TTTTGGCTAAGCTTCTGTTTCC 57.416 40.909 0.00 0.00 0.00 3.13
4371 6794 1.808411 TGGCTAAGCTTCTGTTTCCG 58.192 50.000 0.00 0.00 0.00 4.30
4372 6795 1.087501 GGCTAAGCTTCTGTTTCCGG 58.912 55.000 0.00 0.00 0.00 5.14
4373 6796 1.087501 GCTAAGCTTCTGTTTCCGGG 58.912 55.000 0.00 0.00 0.00 5.73
4374 6797 1.087501 CTAAGCTTCTGTTTCCGGGC 58.912 55.000 0.00 0.00 0.00 6.13
4375 6798 0.690762 TAAGCTTCTGTTTCCGGGCT 59.309 50.000 0.00 0.00 0.00 5.19
4376 6799 0.606673 AAGCTTCTGTTTCCGGGCTC 60.607 55.000 0.00 0.00 0.00 4.70
4377 6800 1.302511 GCTTCTGTTTCCGGGCTCA 60.303 57.895 0.00 0.00 0.00 4.26
4378 6801 0.678048 GCTTCTGTTTCCGGGCTCAT 60.678 55.000 0.00 0.00 0.00 2.90
4379 6802 1.406887 GCTTCTGTTTCCGGGCTCATA 60.407 52.381 0.00 0.00 0.00 2.15
4380 6803 2.939640 GCTTCTGTTTCCGGGCTCATAA 60.940 50.000 0.00 0.00 0.00 1.90
4381 6804 3.343617 CTTCTGTTTCCGGGCTCATAAA 58.656 45.455 0.00 0.00 0.00 1.40
4382 6805 3.644966 TCTGTTTCCGGGCTCATAAAT 57.355 42.857 0.00 0.00 0.00 1.40
4383 6806 4.764050 TCTGTTTCCGGGCTCATAAATA 57.236 40.909 0.00 0.00 0.00 1.40
4384 6807 5.304686 TCTGTTTCCGGGCTCATAAATAT 57.695 39.130 0.00 0.00 0.00 1.28
4385 6808 5.063204 TCTGTTTCCGGGCTCATAAATATG 58.937 41.667 0.00 0.00 35.04 1.78
4386 6809 5.042463 TGTTTCCGGGCTCATAAATATGA 57.958 39.130 0.00 3.29 40.19 2.15
4387 6810 5.441500 TGTTTCCGGGCTCATAAATATGAA 58.558 37.500 0.00 0.00 41.72 2.57
4388 6811 5.888724 TGTTTCCGGGCTCATAAATATGAAA 59.111 36.000 0.00 0.00 41.72 2.69
4389 6812 6.378564 TGTTTCCGGGCTCATAAATATGAAAA 59.621 34.615 0.00 0.00 41.72 2.29
4390 6813 7.093727 TGTTTCCGGGCTCATAAATATGAAAAA 60.094 33.333 0.00 0.00 41.72 1.94
4420 6843 9.761504 ATGACACACAAAAATCACAAATTATGA 57.238 25.926 0.00 0.00 0.00 2.15
4421 6844 9.591792 TGACACACAAAAATCACAAATTATGAA 57.408 25.926 0.00 0.00 0.00 2.57
4572 6995 9.311916 ACAATTCATCGAATTTGAAAAAGTTCA 57.688 25.926 4.18 0.00 39.82 3.18
4575 6998 7.780253 TCATCGAATTTGAAAAAGTTCATCG 57.220 32.000 0.00 5.14 43.29 3.84
4579 7002 8.795786 TCGAATTTGAAAAAGTTCATCGATTT 57.204 26.923 0.00 0.00 43.04 2.17
4580 7003 9.243637 TCGAATTTGAAAAAGTTCATCGATTTT 57.756 25.926 0.00 0.00 43.04 1.82
4581 7004 9.293470 CGAATTTGAAAAAGTTCATCGATTTTG 57.707 29.630 0.00 0.00 42.41 2.44
4657 7080 9.784680 TTGAACAAAATTTCATTGAATTTGGTG 57.215 25.926 21.04 16.44 40.52 4.17
4658 7081 9.170734 TGAACAAAATTTCATTGAATTTGGTGA 57.829 25.926 21.04 11.97 40.52 4.02
4665 7088 8.961294 ATTTCATTGAATTTGGTGAAAGTTCA 57.039 26.923 14.27 0.00 41.97 3.18
4666 7089 8.961294 TTTCATTGAATTTGGTGAAAGTTCAT 57.039 26.923 0.00 0.00 39.73 2.57
4667 7090 7.949903 TCATTGAATTTGGTGAAAGTTCATG 57.050 32.000 0.00 0.00 39.73 3.07
4668 7091 7.724287 TCATTGAATTTGGTGAAAGTTCATGA 58.276 30.769 0.00 0.00 39.73 3.07
4669 7092 8.369424 TCATTGAATTTGGTGAAAGTTCATGAT 58.631 29.630 0.00 0.00 39.73 2.45
4670 7093 9.642327 CATTGAATTTGGTGAAAGTTCATGATA 57.358 29.630 0.00 0.00 39.73 2.15
4701 7124 8.934507 AAAAAGTTCATGAATTAAAACCACGA 57.065 26.923 12.12 0.00 0.00 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
558 602 1.600636 CAACTGCAGGCTTTCGGGA 60.601 57.895 19.93 0.00 0.00 5.14
641 685 3.881089 CGTCAAAAGTTTAGTCCCACCTT 59.119 43.478 0.00 0.00 0.00 3.50
794 844 5.635700 TGATTTGTCAATCATGCATGTTGTG 59.364 36.000 25.43 19.96 43.32 3.33
795 845 5.785243 TGATTTGTCAATCATGCATGTTGT 58.215 33.333 25.43 10.87 43.32 3.32
856 906 5.045012 TCATCATAGAAGGATGCAAAGCT 57.955 39.130 0.00 0.00 41.46 3.74
920 1960 7.556275 ACCCATCATCACGACATAACTATTTTT 59.444 33.333 0.00 0.00 0.00 1.94
1015 2077 9.626045 CTTTTTGGATGGACAATTAAGAGTTAC 57.374 33.333 0.00 0.00 30.35 2.50
1044 2107 1.202927 AGTGTGGCAGTGCATACCTTT 60.203 47.619 18.61 1.34 0.00 3.11
1050 2113 2.362736 CATAGAAGTGTGGCAGTGCAT 58.637 47.619 18.61 0.00 0.00 3.96
1057 2120 1.204146 TCTCCCCATAGAAGTGTGGC 58.796 55.000 0.00 0.00 33.56 5.01
1131 2211 8.941977 GTTTGATGTCCCAAAGTTTTAGTTTTT 58.058 29.630 0.00 0.00 36.78 1.94
1135 2215 6.783708 TGTTTGATGTCCCAAAGTTTTAGT 57.216 33.333 0.00 0.00 36.78 2.24
1136 2216 7.432869 TCATGTTTGATGTCCCAAAGTTTTAG 58.567 34.615 0.00 0.00 36.78 1.85
1137 2217 7.353414 TCATGTTTGATGTCCCAAAGTTTTA 57.647 32.000 0.00 0.00 36.78 1.52
1194 2274 3.065371 GGGCTCCTCGAATGTTATTTGTG 59.935 47.826 0.00 0.00 0.00 3.33
1234 2315 1.806542 AGTGCACATAACCTTTGAGCG 59.193 47.619 21.04 0.00 34.00 5.03
1243 2324 5.701290 AGGACTACTGAAAAGTGCACATAAC 59.299 40.000 21.04 8.30 37.73 1.89
1290 2371 2.420022 CGGTGTGAAAACCCATCATCTC 59.580 50.000 0.00 0.00 36.84 2.75
1440 2524 4.580580 CAGGAAAAAGTAAGGAAGTGTGCT 59.419 41.667 0.00 0.00 0.00 4.40
1462 2546 8.837099 AACCATGACTTAAAATCCATATTCCA 57.163 30.769 0.00 0.00 0.00 3.53
1480 2564 2.811431 CGTTCACCTAAGCAAACCATGA 59.189 45.455 0.00 0.00 0.00 3.07
1511 2595 8.950208 AGTTTTTCTACCTATTGAGTATGCTC 57.050 34.615 3.51 3.51 41.97 4.26
1539 2623 1.559682 GCCAGGAACCTCACCTATTGA 59.440 52.381 0.00 0.00 35.84 2.57
1551 2635 4.717313 GGTGGGTCGGCCAGGAAC 62.717 72.222 9.07 0.00 36.17 3.62
1567 2651 0.672401 ACGGCGTACCTTTCACATGG 60.672 55.000 12.58 0.00 0.00 3.66
1604 2688 3.305897 TGTCGTGATACAATGCGAACATC 59.694 43.478 0.00 0.00 34.62 3.06
1605 2689 3.062099 GTGTCGTGATACAATGCGAACAT 59.938 43.478 0.00 0.00 38.49 2.71
1652 3806 1.157585 GACAGCCTTCCTTTTCGACC 58.842 55.000 0.00 0.00 0.00 4.79
1678 3832 0.325933 TGGACTACTCGGACTCGGAA 59.674 55.000 0.00 0.00 36.95 4.30
1736 3891 2.041153 AAGCGGAAGTGGGCTTTTG 58.959 52.632 0.00 0.00 46.71 2.44
1740 3895 2.280552 TACGAAGCGGAAGTGGGCT 61.281 57.895 0.00 0.00 42.33 5.19
1742 3897 1.804326 CGTACGAAGCGGAAGTGGG 60.804 63.158 10.44 0.00 0.00 4.61
1892 4053 2.925170 ACGTGAGAGCCTTGGCCT 60.925 61.111 3.32 5.25 0.00 5.19
1896 4057 0.318699 TCGAACACGTGAGAGCCTTG 60.319 55.000 25.01 2.93 0.00 3.61
1897 4058 0.039074 CTCGAACACGTGAGAGCCTT 60.039 55.000 25.01 4.25 34.04 4.35
2159 4328 4.466828 CAAATTCGCGAGTCTTTGTCATT 58.533 39.130 22.36 10.54 32.75 2.57
2274 4455 0.859232 ATTGTGACGACGCACTCAAC 59.141 50.000 18.51 3.16 39.49 3.18
2689 4915 5.043903 CCGTCTTCACATCGATGTTCTTAT 58.956 41.667 28.04 2.97 39.39 1.73
2762 4995 2.753989 TAAACCGAATGCATGCATCG 57.246 45.000 32.25 30.57 35.31 3.84
2848 5081 3.844640 ACTAAGGCCAAAGGACATGTTT 58.155 40.909 5.01 0.00 29.21 2.83
2937 5174 5.104941 ACTCACTGGCAAGTTACTATGCATA 60.105 40.000 16.66 6.20 44.32 3.14
2983 5230 9.968870 CTACTAGTAAATCTAATTGACACCCTC 57.031 37.037 3.76 0.00 0.00 4.30
2998 5245 5.141182 TGCTGAGCCTAGCTACTAGTAAAT 58.859 41.667 0.23 0.00 44.01 1.40
3070 5320 2.554272 GTTACAACACGCGGCCTG 59.446 61.111 12.47 6.54 0.00 4.85
3071 5321 3.039588 CGTTACAACACGCGGCCT 61.040 61.111 12.47 0.00 32.43 5.19
3077 5327 0.304098 TTTTCCCGCGTTACAACACG 59.696 50.000 4.92 0.00 43.36 4.49
3100 5350 6.479972 AATGTGATCATGGCAATTGAAGAT 57.520 33.333 10.34 5.89 34.19 2.40
3102 5352 6.370442 ACAAAATGTGATCATGGCAATTGAAG 59.630 34.615 10.34 0.00 34.19 3.02
3104 5354 5.795972 ACAAAATGTGATCATGGCAATTGA 58.204 33.333 10.34 0.00 34.19 2.57
3105 5355 6.370442 AGAACAAAATGTGATCATGGCAATTG 59.630 34.615 0.00 0.00 34.19 2.32
3106 5356 6.469410 AGAACAAAATGTGATCATGGCAATT 58.531 32.000 0.00 0.00 34.19 2.32
3110 5360 6.694411 GTGATAGAACAAAATGTGATCATGGC 59.306 38.462 0.00 0.00 31.72 4.40
3129 5385 8.494016 TGAGTGATAGTGTATATCGGTGATAG 57.506 38.462 0.00 0.00 0.00 2.08
3130 5386 9.462606 AATGAGTGATAGTGTATATCGGTGATA 57.537 33.333 0.00 0.00 0.00 2.15
3143 5399 8.393366 ACGATTTCATGAAAATGAGTGATAGTG 58.607 33.333 23.91 2.88 37.70 2.74
3188 5446 9.185192 GAGGTTCATGAGTTTTAAAATGTTCAG 57.815 33.333 3.52 4.40 0.00 3.02
3196 5454 8.746052 TTTCAGAGAGGTTCATGAGTTTTAAA 57.254 30.769 0.00 0.00 0.00 1.52
3197 5455 8.924511 ATTTCAGAGAGGTTCATGAGTTTTAA 57.075 30.769 0.00 0.00 0.00 1.52
3198 5456 7.331934 CGATTTCAGAGAGGTTCATGAGTTTTA 59.668 37.037 0.00 0.00 0.00 1.52
3199 5457 6.148480 CGATTTCAGAGAGGTTCATGAGTTTT 59.852 38.462 0.00 0.00 0.00 2.43
3200 5458 5.641209 CGATTTCAGAGAGGTTCATGAGTTT 59.359 40.000 0.00 0.00 0.00 2.66
3201 5459 5.174395 CGATTTCAGAGAGGTTCATGAGTT 58.826 41.667 0.00 0.00 0.00 3.01
3202 5460 4.221703 ACGATTTCAGAGAGGTTCATGAGT 59.778 41.667 0.00 0.00 0.00 3.41
3203 5461 4.565962 CACGATTTCAGAGAGGTTCATGAG 59.434 45.833 0.00 0.00 0.00 2.90
3204 5462 4.220602 TCACGATTTCAGAGAGGTTCATGA 59.779 41.667 0.00 0.00 0.00 3.07
3205 5463 4.498241 TCACGATTTCAGAGAGGTTCATG 58.502 43.478 0.00 0.00 0.00 3.07
3206 5464 4.808414 TCACGATTTCAGAGAGGTTCAT 57.192 40.909 0.00 0.00 0.00 2.57
3207 5465 4.202212 TGTTCACGATTTCAGAGAGGTTCA 60.202 41.667 0.00 0.00 0.00 3.18
3208 5466 4.307432 TGTTCACGATTTCAGAGAGGTTC 58.693 43.478 0.00 0.00 0.00 3.62
3209 5467 4.336889 TGTTCACGATTTCAGAGAGGTT 57.663 40.909 0.00 0.00 0.00 3.50
3210 5468 4.543590 ATGTTCACGATTTCAGAGAGGT 57.456 40.909 0.00 0.00 0.00 3.85
3211 5469 5.869753 AAATGTTCACGATTTCAGAGAGG 57.130 39.130 0.00 0.00 0.00 3.69
3212 5470 9.270576 CATAAAAATGTTCACGATTTCAGAGAG 57.729 33.333 0.00 0.00 0.00 3.20
3213 5471 8.236586 CCATAAAAATGTTCACGATTTCAGAGA 58.763 33.333 0.00 0.00 0.00 3.10
3214 5472 8.236586 TCCATAAAAATGTTCACGATTTCAGAG 58.763 33.333 0.00 0.00 0.00 3.35
3215 5473 8.105097 TCCATAAAAATGTTCACGATTTCAGA 57.895 30.769 0.00 0.00 0.00 3.27
3216 5474 8.915871 ATCCATAAAAATGTTCACGATTTCAG 57.084 30.769 0.00 0.00 0.00 3.02
3217 5475 9.703892 AAATCCATAAAAATGTTCACGATTTCA 57.296 25.926 0.00 0.00 0.00 2.69
3220 5478 8.859156 CGAAAATCCATAAAAATGTTCACGATT 58.141 29.630 0.00 0.00 0.00 3.34
3221 5479 8.240682 TCGAAAATCCATAAAAATGTTCACGAT 58.759 29.630 0.00 0.00 0.00 3.73
3222 5480 7.585867 TCGAAAATCCATAAAAATGTTCACGA 58.414 30.769 0.00 0.00 0.00 4.35
3223 5481 7.789341 TCGAAAATCCATAAAAATGTTCACG 57.211 32.000 0.00 0.00 0.00 4.35
3224 5482 8.973378 TGTTCGAAAATCCATAAAAATGTTCAC 58.027 29.630 0.00 0.00 0.00 3.18
3225 5483 9.703892 ATGTTCGAAAATCCATAAAAATGTTCA 57.296 25.926 0.00 0.00 0.00 3.18
3228 5486 9.927668 AGAATGTTCGAAAATCCATAAAAATGT 57.072 25.926 0.16 0.00 0.00 2.71
3237 5495 9.008965 TGATTTTAGAGAATGTTCGAAAATCCA 57.991 29.630 21.60 13.84 40.32 3.41
3346 5604 9.599866 TCGTTGATTCTAGAAATGTTCACATAT 57.400 29.630 9.71 0.00 35.10 1.78
3347 5605 8.996024 TCGTTGATTCTAGAAATGTTCACATA 57.004 30.769 9.71 0.00 35.10 2.29
3348 5606 7.905604 TCGTTGATTCTAGAAATGTTCACAT 57.094 32.000 9.71 0.00 38.41 3.21
3349 5607 7.225734 TGTTCGTTGATTCTAGAAATGTTCACA 59.774 33.333 9.71 5.11 0.00 3.58
3350 5608 7.572759 TGTTCGTTGATTCTAGAAATGTTCAC 58.427 34.615 9.71 2.63 0.00 3.18
3351 5609 7.722795 TGTTCGTTGATTCTAGAAATGTTCA 57.277 32.000 9.71 5.84 0.00 3.18
3379 5637 6.889198 TGTTCCACCAAACAATATCCAAAAA 58.111 32.000 0.00 0.00 36.25 1.94
3380 5638 6.485830 TGTTCCACCAAACAATATCCAAAA 57.514 33.333 0.00 0.00 36.25 2.44
3381 5639 6.678568 ATGTTCCACCAAACAATATCCAAA 57.321 33.333 0.00 0.00 42.10 3.28
3382 5640 6.678568 AATGTTCCACCAAACAATATCCAA 57.321 33.333 0.00 0.00 42.10 3.53
3383 5641 6.678568 AAATGTTCCACCAAACAATATCCA 57.321 33.333 0.00 0.00 42.10 3.41
3384 5642 7.977789 AAAAATGTTCCACCAAACAATATCC 57.022 32.000 0.00 0.00 42.10 2.59
3464 5722 8.772705 GGCATAAAATGTTCACTGATTCAAAAA 58.227 29.630 0.00 0.00 0.00 1.94
3465 5723 7.387397 GGGCATAAAATGTTCACTGATTCAAAA 59.613 33.333 0.00 0.00 0.00 2.44
3466 5724 6.873076 GGGCATAAAATGTTCACTGATTCAAA 59.127 34.615 0.00 0.00 0.00 2.69
3467 5725 6.211184 AGGGCATAAAATGTTCACTGATTCAA 59.789 34.615 0.00 0.00 0.00 2.69
3468 5726 5.716228 AGGGCATAAAATGTTCACTGATTCA 59.284 36.000 0.00 0.00 0.00 2.57
3469 5727 6.038356 CAGGGCATAAAATGTTCACTGATTC 58.962 40.000 0.00 0.00 0.00 2.52
3470 5728 5.481473 ACAGGGCATAAAATGTTCACTGATT 59.519 36.000 0.00 0.00 0.00 2.57
3471 5729 5.018809 ACAGGGCATAAAATGTTCACTGAT 58.981 37.500 0.00 0.00 0.00 2.90
3472 5730 4.406456 ACAGGGCATAAAATGTTCACTGA 58.594 39.130 0.00 0.00 0.00 3.41
3473 5731 4.789012 ACAGGGCATAAAATGTTCACTG 57.211 40.909 0.00 0.00 0.00 3.66
3474 5732 5.391312 GAACAGGGCATAAAATGTTCACT 57.609 39.130 11.02 0.00 46.81 3.41
3478 5736 6.418057 TTCTTGAACAGGGCATAAAATGTT 57.582 33.333 0.00 0.00 38.53 2.71
3479 5737 6.610075 ATTCTTGAACAGGGCATAAAATGT 57.390 33.333 0.00 0.00 0.00 2.71
3480 5738 7.098477 TGAATTCTTGAACAGGGCATAAAATG 58.902 34.615 7.05 0.00 0.00 2.32
3481 5739 7.243604 TGAATTCTTGAACAGGGCATAAAAT 57.756 32.000 7.05 0.00 0.00 1.82
3482 5740 6.662865 TGAATTCTTGAACAGGGCATAAAA 57.337 33.333 7.05 0.00 0.00 1.52
3483 5741 6.127366 GGATGAATTCTTGAACAGGGCATAAA 60.127 38.462 7.05 0.00 0.00 1.40
3484 5742 5.360714 GGATGAATTCTTGAACAGGGCATAA 59.639 40.000 7.05 0.00 0.00 1.90
3485 5743 4.889409 GGATGAATTCTTGAACAGGGCATA 59.111 41.667 7.05 0.00 0.00 3.14
3486 5744 3.703052 GGATGAATTCTTGAACAGGGCAT 59.297 43.478 7.05 0.00 0.00 4.40
3487 5745 3.091545 GGATGAATTCTTGAACAGGGCA 58.908 45.455 7.05 0.00 0.00 5.36
3488 5746 2.098117 CGGATGAATTCTTGAACAGGGC 59.902 50.000 7.05 0.00 0.00 5.19
3489 5747 3.609853 TCGGATGAATTCTTGAACAGGG 58.390 45.455 7.05 0.00 0.00 4.45
3490 5748 5.824904 AATCGGATGAATTCTTGAACAGG 57.175 39.130 7.05 0.00 0.00 4.00
3491 5749 7.148255 TGGTTAATCGGATGAATTCTTGAACAG 60.148 37.037 7.05 0.00 0.00 3.16
3492 5750 6.657117 TGGTTAATCGGATGAATTCTTGAACA 59.343 34.615 7.05 0.00 0.00 3.18
3493 5751 7.083875 TGGTTAATCGGATGAATTCTTGAAC 57.916 36.000 7.05 0.68 0.00 3.18
3494 5752 6.884295 ACTGGTTAATCGGATGAATTCTTGAA 59.116 34.615 7.05 0.00 0.00 2.69
3495 5753 6.414732 ACTGGTTAATCGGATGAATTCTTGA 58.585 36.000 7.05 0.00 0.00 3.02
3496 5754 6.683974 ACTGGTTAATCGGATGAATTCTTG 57.316 37.500 7.05 0.00 0.00 3.02
3497 5755 8.674607 GTTAACTGGTTAATCGGATGAATTCTT 58.325 33.333 7.05 0.00 37.37 2.52
3498 5756 8.047310 AGTTAACTGGTTAATCGGATGAATTCT 58.953 33.333 7.48 0.00 37.37 2.40
3499 5757 8.209917 AGTTAACTGGTTAATCGGATGAATTC 57.790 34.615 7.48 0.00 37.37 2.17
3500 5758 8.458843 CAAGTTAACTGGTTAATCGGATGAATT 58.541 33.333 9.34 0.00 37.37 2.17
3501 5759 7.415206 GCAAGTTAACTGGTTAATCGGATGAAT 60.415 37.037 9.34 0.00 37.37 2.57
3502 5760 6.128117 GCAAGTTAACTGGTTAATCGGATGAA 60.128 38.462 9.34 0.00 37.37 2.57
3503 5761 5.353123 GCAAGTTAACTGGTTAATCGGATGA 59.647 40.000 9.34 0.00 37.37 2.92
3504 5762 5.448632 GGCAAGTTAACTGGTTAATCGGATG 60.449 44.000 9.34 0.03 37.37 3.51
3505 5763 4.638865 GGCAAGTTAACTGGTTAATCGGAT 59.361 41.667 9.34 0.00 37.37 4.18
3506 5764 4.004982 GGCAAGTTAACTGGTTAATCGGA 58.995 43.478 9.34 0.00 37.37 4.55
3507 5765 3.181514 CGGCAAGTTAACTGGTTAATCGG 60.182 47.826 9.34 0.00 37.37 4.18
3508 5766 3.680937 TCGGCAAGTTAACTGGTTAATCG 59.319 43.478 9.34 7.09 37.37 3.34
3509 5767 5.813080 ATCGGCAAGTTAACTGGTTAATC 57.187 39.130 9.34 0.00 37.37 1.75
3510 5768 7.690952 TTAATCGGCAAGTTAACTGGTTAAT 57.309 32.000 9.34 0.00 37.37 1.40
3511 5769 7.148205 GGATTAATCGGCAAGTTAACTGGTTAA 60.148 37.037 9.34 9.79 33.48 2.01
3512 5770 6.316890 GGATTAATCGGCAAGTTAACTGGTTA 59.683 38.462 9.34 0.65 0.00 2.85
3513 5771 5.124936 GGATTAATCGGCAAGTTAACTGGTT 59.875 40.000 9.34 1.66 0.00 3.67
3514 5772 4.638865 GGATTAATCGGCAAGTTAACTGGT 59.361 41.667 9.34 0.00 0.00 4.00
3515 5773 4.036380 GGGATTAATCGGCAAGTTAACTGG 59.964 45.833 9.34 7.35 0.00 4.00
3516 5774 4.881850 AGGGATTAATCGGCAAGTTAACTG 59.118 41.667 9.34 4.88 0.00 3.16
3517 5775 5.112129 AGGGATTAATCGGCAAGTTAACT 57.888 39.130 9.32 1.12 0.00 2.24
3518 5776 6.053650 AGTAGGGATTAATCGGCAAGTTAAC 58.946 40.000 9.32 0.00 0.00 2.01
3519 5777 6.243216 AGTAGGGATTAATCGGCAAGTTAA 57.757 37.500 9.32 0.00 0.00 2.01
3520 5778 5.508489 CGAGTAGGGATTAATCGGCAAGTTA 60.508 44.000 9.32 0.00 43.89 2.24
3521 5779 4.704965 GAGTAGGGATTAATCGGCAAGTT 58.295 43.478 9.32 0.00 0.00 2.66
3522 5780 3.243771 CGAGTAGGGATTAATCGGCAAGT 60.244 47.826 9.32 0.00 43.89 3.16
3523 5781 3.318017 CGAGTAGGGATTAATCGGCAAG 58.682 50.000 9.32 0.00 43.89 4.01
3524 5782 3.380479 CGAGTAGGGATTAATCGGCAA 57.620 47.619 9.32 0.00 43.89 4.52
3538 5796 1.297664 CTCGGTGACCCTACGAGTAG 58.702 60.000 0.00 3.39 46.43 2.57
3539 5797 3.465990 CTCGGTGACCCTACGAGTA 57.534 57.895 0.00 0.00 46.43 2.59
3540 5798 4.315588 CTCGGTGACCCTACGAGT 57.684 61.111 0.00 0.00 46.43 4.18
3542 5800 0.745845 GCTACTCGGTGACCCTACGA 60.746 60.000 0.00 0.00 35.14 3.43
3543 5801 1.722636 GGCTACTCGGTGACCCTACG 61.723 65.000 0.00 0.00 0.00 3.51
3544 5802 1.722636 CGGCTACTCGGTGACCCTAC 61.723 65.000 0.00 0.00 0.00 3.18
3545 5803 1.452651 CGGCTACTCGGTGACCCTA 60.453 63.158 0.00 0.00 0.00 3.53
3546 5804 2.569218 ATCGGCTACTCGGTGACCCT 62.569 60.000 0.00 0.00 0.00 4.34
3547 5805 1.673808 AATCGGCTACTCGGTGACCC 61.674 60.000 0.00 0.00 0.00 4.46
3548 5806 1.027357 TAATCGGCTACTCGGTGACC 58.973 55.000 0.00 0.00 0.00 4.02
3549 5807 2.457970 GTTAATCGGCTACTCGGTGAC 58.542 52.381 0.00 0.00 0.00 3.67
3550 5808 1.406539 GGTTAATCGGCTACTCGGTGA 59.593 52.381 0.00 0.00 0.00 4.02
3551 5809 1.849097 GGTTAATCGGCTACTCGGTG 58.151 55.000 0.00 0.00 0.00 4.94
3552 5810 0.383231 CGGTTAATCGGCTACTCGGT 59.617 55.000 0.00 0.00 0.00 4.69
3553 5811 0.664761 TCGGTTAATCGGCTACTCGG 59.335 55.000 8.52 0.00 0.00 4.63
3554 5812 2.701073 ATCGGTTAATCGGCTACTCG 57.299 50.000 8.52 0.00 0.00 4.18
3555 5813 6.629182 GATTAATCGGTTAATCGGCTACTC 57.371 41.667 21.90 2.47 43.53 2.59
3564 5822 5.286267 ACTCGGGTGATTAATCGGTTAAT 57.714 39.130 13.44 13.44 41.90 1.40
3565 5823 4.741321 ACTCGGGTGATTAATCGGTTAA 57.259 40.909 10.80 2.81 34.50 2.01
3566 5824 5.850557 TTACTCGGGTGATTAATCGGTTA 57.149 39.130 10.80 0.00 0.00 2.85
3567 5825 4.741321 TTACTCGGGTGATTAATCGGTT 57.259 40.909 10.80 0.00 0.00 4.44
3568 5826 4.950205 ATTACTCGGGTGATTAATCGGT 57.050 40.909 10.80 5.45 27.14 4.69
3569 5827 5.294356 TCAATTACTCGGGTGATTAATCGG 58.706 41.667 4.96 0.00 31.05 4.18
3570 5828 7.421530 AATCAATTACTCGGGTGATTAATCG 57.578 36.000 4.96 0.00 38.59 3.34
3574 5832 9.062524 CCATTTAATCAATTACTCGGGTGATTA 57.937 33.333 4.96 3.71 40.34 1.75
3575 5833 7.470009 GCCATTTAATCAATTACTCGGGTGATT 60.470 37.037 0.00 0.00 42.05 2.57
3576 5834 6.016276 GCCATTTAATCAATTACTCGGGTGAT 60.016 38.462 0.00 0.00 32.09 3.06
3577 5835 5.298276 GCCATTTAATCAATTACTCGGGTGA 59.702 40.000 0.00 0.00 0.00 4.02
3578 5836 5.507315 GGCCATTTAATCAATTACTCGGGTG 60.507 44.000 0.00 0.00 0.00 4.61
3579 5837 4.583073 GGCCATTTAATCAATTACTCGGGT 59.417 41.667 0.00 0.00 0.00 5.28
3580 5838 4.320202 CGGCCATTTAATCAATTACTCGGG 60.320 45.833 2.24 0.00 0.00 5.14
3581 5839 4.513692 TCGGCCATTTAATCAATTACTCGG 59.486 41.667 2.24 0.00 0.00 4.63
3582 5840 5.666969 TCGGCCATTTAATCAATTACTCG 57.333 39.130 2.24 0.00 0.00 4.18
3583 5841 9.394477 GTTAATCGGCCATTTAATCAATTACTC 57.606 33.333 2.24 0.00 0.00 2.59
3584 5842 9.131791 AGTTAATCGGCCATTTAATCAATTACT 57.868 29.630 2.24 0.00 0.00 2.24
3585 5843 9.744468 AAGTTAATCGGCCATTTAATCAATTAC 57.256 29.630 2.24 0.00 0.00 1.89
3586 5844 9.743057 CAAGTTAATCGGCCATTTAATCAATTA 57.257 29.630 2.24 0.00 0.00 1.40
3587 5845 7.224557 GCAAGTTAATCGGCCATTTAATCAATT 59.775 33.333 2.24 0.00 0.00 2.32
3588 5846 6.701400 GCAAGTTAATCGGCCATTTAATCAAT 59.299 34.615 2.24 0.00 0.00 2.57
3589 5847 6.039616 GCAAGTTAATCGGCCATTTAATCAA 58.960 36.000 2.24 0.00 0.00 2.57
3590 5848 5.451242 GGCAAGTTAATCGGCCATTTAATCA 60.451 40.000 2.24 0.00 45.70 2.57
3591 5849 4.982295 GGCAAGTTAATCGGCCATTTAATC 59.018 41.667 2.24 1.98 45.70 1.75
3592 5850 4.499019 CGGCAAGTTAATCGGCCATTTAAT 60.499 41.667 2.24 0.00 46.75 1.40
3593 5851 3.181495 CGGCAAGTTAATCGGCCATTTAA 60.181 43.478 2.24 3.07 46.75 1.52
3594 5852 2.356382 CGGCAAGTTAATCGGCCATTTA 59.644 45.455 2.24 0.00 46.75 1.40
3595 5853 1.134175 CGGCAAGTTAATCGGCCATTT 59.866 47.619 2.24 0.00 46.75 2.32
3596 5854 0.738389 CGGCAAGTTAATCGGCCATT 59.262 50.000 2.24 4.55 46.75 3.16
3597 5855 0.107410 TCGGCAAGTTAATCGGCCAT 60.107 50.000 2.24 0.00 46.75 4.40
3598 5856 0.107410 ATCGGCAAGTTAATCGGCCA 60.107 50.000 2.24 0.00 46.75 5.36
3599 5857 1.021968 AATCGGCAAGTTAATCGGCC 58.978 50.000 0.00 0.00 42.98 6.13
3600 5858 2.349532 GCTAATCGGCAAGTTAATCGGC 60.350 50.000 0.00 0.00 0.00 5.54
3601 5859 2.223377 GGCTAATCGGCAAGTTAATCGG 59.777 50.000 0.00 0.00 38.25 4.18
3602 5860 3.131396 AGGCTAATCGGCAAGTTAATCG 58.869 45.455 0.00 0.00 41.46 3.34
3603 5861 6.803154 AATAGGCTAATCGGCAAGTTAATC 57.197 37.500 0.00 0.00 41.46 1.75
3604 5862 8.863872 ATTAATAGGCTAATCGGCAAGTTAAT 57.136 30.769 0.00 0.00 41.46 1.40
3605 5863 7.389607 GGATTAATAGGCTAATCGGCAAGTTAA 59.610 37.037 0.00 0.00 38.61 2.01
3606 5864 6.877322 GGATTAATAGGCTAATCGGCAAGTTA 59.123 38.462 0.00 0.00 38.61 2.24
3607 5865 5.705905 GGATTAATAGGCTAATCGGCAAGTT 59.294 40.000 0.00 0.00 38.61 2.66
3608 5866 5.246307 GGATTAATAGGCTAATCGGCAAGT 58.754 41.667 0.00 0.00 38.61 3.16
3609 5867 4.636206 GGGATTAATAGGCTAATCGGCAAG 59.364 45.833 0.00 0.00 38.61 4.01
3610 5868 4.566907 GGGGATTAATAGGCTAATCGGCAA 60.567 45.833 0.00 0.00 38.61 4.52
3611 5869 3.054655 GGGGATTAATAGGCTAATCGGCA 60.055 47.826 0.00 0.00 38.61 5.69
3612 5870 3.200165 AGGGGATTAATAGGCTAATCGGC 59.800 47.826 0.00 0.00 38.61 5.54
3613 5871 5.661759 AGTAGGGGATTAATAGGCTAATCGG 59.338 44.000 0.00 0.00 38.61 4.18
3614 5872 6.459848 CGAGTAGGGGATTAATAGGCTAATCG 60.460 46.154 0.00 0.00 38.61 3.34
3615 5873 6.683360 GCGAGTAGGGGATTAATAGGCTAATC 60.683 46.154 0.00 0.00 37.50 1.75
3616 5874 5.128991 GCGAGTAGGGGATTAATAGGCTAAT 59.871 44.000 0.00 0.00 0.00 1.73
3617 5875 4.465305 GCGAGTAGGGGATTAATAGGCTAA 59.535 45.833 0.00 0.00 0.00 3.09
3618 5876 4.021916 GCGAGTAGGGGATTAATAGGCTA 58.978 47.826 0.00 0.00 0.00 3.93
3619 5877 2.832733 GCGAGTAGGGGATTAATAGGCT 59.167 50.000 0.00 0.00 0.00 4.58
3620 5878 2.093606 GGCGAGTAGGGGATTAATAGGC 60.094 54.545 0.00 0.00 0.00 3.93
3621 5879 3.170717 TGGCGAGTAGGGGATTAATAGG 58.829 50.000 0.00 0.00 0.00 2.57
3622 5880 3.368531 GCTGGCGAGTAGGGGATTAATAG 60.369 52.174 0.00 0.00 0.00 1.73
3623 5881 2.565834 GCTGGCGAGTAGGGGATTAATA 59.434 50.000 0.00 0.00 0.00 0.98
3624 5882 1.348036 GCTGGCGAGTAGGGGATTAAT 59.652 52.381 0.00 0.00 0.00 1.40
3625 5883 0.756903 GCTGGCGAGTAGGGGATTAA 59.243 55.000 0.00 0.00 0.00 1.40
3626 5884 1.119574 GGCTGGCGAGTAGGGGATTA 61.120 60.000 0.00 0.00 0.00 1.75
3627 5885 2.444256 GGCTGGCGAGTAGGGGATT 61.444 63.158 0.00 0.00 0.00 3.01
3628 5886 2.844839 GGCTGGCGAGTAGGGGAT 60.845 66.667 0.00 0.00 0.00 3.85
3629 5887 3.916438 TTGGCTGGCGAGTAGGGGA 62.916 63.158 0.00 0.00 0.00 4.81
3630 5888 3.399181 TTGGCTGGCGAGTAGGGG 61.399 66.667 0.00 0.00 0.00 4.79
3631 5889 2.125106 GTTGGCTGGCGAGTAGGG 60.125 66.667 0.00 0.00 0.00 3.53
3632 5890 2.125106 GGTTGGCTGGCGAGTAGG 60.125 66.667 0.00 0.00 0.00 3.18
3633 5891 2.509336 CGGTTGGCTGGCGAGTAG 60.509 66.667 0.00 0.00 0.00 2.57
3634 5892 2.992689 TCGGTTGGCTGGCGAGTA 60.993 61.111 0.00 0.00 0.00 2.59
3635 5893 4.379243 CTCGGTTGGCTGGCGAGT 62.379 66.667 0.00 0.00 0.00 4.18
3640 5898 2.599645 ATAGCTGCTCGGTTGGCTGG 62.600 60.000 4.91 0.00 36.40 4.85
3641 5899 1.153289 ATAGCTGCTCGGTTGGCTG 60.153 57.895 4.91 0.00 36.40 4.85
3642 5900 1.144936 GATAGCTGCTCGGTTGGCT 59.855 57.895 4.91 0.00 38.62 4.75
3643 5901 1.153369 TGATAGCTGCTCGGTTGGC 60.153 57.895 4.91 0.00 0.00 4.52
3644 5902 0.176680 ACTGATAGCTGCTCGGTTGG 59.823 55.000 4.91 0.00 0.00 3.77
3645 5903 2.015736 AACTGATAGCTGCTCGGTTG 57.984 50.000 19.07 0.00 39.99 3.77
3646 5904 3.522553 GTTAACTGATAGCTGCTCGGTT 58.477 45.455 21.80 21.80 43.06 4.44
3647 5905 2.479730 CGTTAACTGATAGCTGCTCGGT 60.480 50.000 4.91 0.76 33.65 4.69
3648 5906 2.120232 CGTTAACTGATAGCTGCTCGG 58.880 52.381 4.91 0.01 0.00 4.63
3649 5907 3.066369 TCGTTAACTGATAGCTGCTCG 57.934 47.619 4.91 0.00 0.00 5.03
3650 5908 5.050702 GGAAATCGTTAACTGATAGCTGCTC 60.051 44.000 4.91 0.00 0.00 4.26
3651 5909 4.811557 GGAAATCGTTAACTGATAGCTGCT 59.188 41.667 7.57 7.57 0.00 4.24
3652 5910 4.811557 AGGAAATCGTTAACTGATAGCTGC 59.188 41.667 3.71 0.00 0.00 5.25
3653 5911 6.042777 TGAGGAAATCGTTAACTGATAGCTG 58.957 40.000 3.71 0.00 0.00 4.24
3654 5912 6.222038 TGAGGAAATCGTTAACTGATAGCT 57.778 37.500 3.71 0.00 0.00 3.32
3655 5913 6.312918 TGTTGAGGAAATCGTTAACTGATAGC 59.687 38.462 3.71 4.59 33.31 2.97
3656 5914 7.827819 TGTTGAGGAAATCGTTAACTGATAG 57.172 36.000 3.71 0.00 33.31 2.08
3657 5915 8.664798 CATTGTTGAGGAAATCGTTAACTGATA 58.335 33.333 3.71 0.00 33.31 2.15
3658 5916 7.390440 TCATTGTTGAGGAAATCGTTAACTGAT 59.610 33.333 3.71 5.68 33.31 2.90
3659 5917 6.708502 TCATTGTTGAGGAAATCGTTAACTGA 59.291 34.615 3.71 3.47 33.31 3.41
3660 5918 6.898041 TCATTGTTGAGGAAATCGTTAACTG 58.102 36.000 3.71 0.00 33.31 3.16
3661 5919 7.687941 ATCATTGTTGAGGAAATCGTTAACT 57.312 32.000 3.71 0.00 34.73 2.24
3662 5920 8.742554 AAATCATTGTTGAGGAAATCGTTAAC 57.257 30.769 0.00 0.00 34.73 2.01
3665 5923 9.357652 CATAAAATCATTGTTGAGGAAATCGTT 57.642 29.630 0.00 0.00 34.73 3.85
3666 5924 8.739039 TCATAAAATCATTGTTGAGGAAATCGT 58.261 29.630 0.00 0.00 34.73 3.73
3667 5925 9.571810 TTCATAAAATCATTGTTGAGGAAATCG 57.428 29.630 0.00 0.00 34.73 3.34
3758 6019 8.266392 TGAACAAAATTTCAGCAACTCAATTT 57.734 26.923 0.00 0.00 31.68 1.82
3760 6021 7.846644 TTGAACAAAATTTCAGCAACTCAAT 57.153 28.000 0.00 0.00 36.84 2.57
3832 6105 7.477144 AAAGAAATGTTCGGGAAATCAAAAC 57.523 32.000 0.00 0.00 34.02 2.43
4016 6416 6.713792 TTTTGTTTTCCTTTTCCGTCTTTG 57.286 33.333 0.00 0.00 0.00 2.77
4181 6604 1.456287 CCCCAGGCCACCTATAAGC 59.544 63.158 5.01 0.00 29.64 3.09
4194 6617 1.341156 CCACTTAGGAGCTCCCCCAG 61.341 65.000 29.54 22.84 41.22 4.45
4195 6618 1.306997 CCACTTAGGAGCTCCCCCA 60.307 63.158 29.54 12.23 41.22 4.96
4196 6619 2.747443 GCCACTTAGGAGCTCCCCC 61.747 68.421 29.54 5.32 41.22 5.40
4203 6626 0.105039 CTTAGGGCGCCACTTAGGAG 59.895 60.000 30.85 11.50 41.22 3.69
4204 6627 1.968050 GCTTAGGGCGCCACTTAGGA 61.968 60.000 30.85 4.88 41.22 2.94
4205 6628 1.523938 GCTTAGGGCGCCACTTAGG 60.524 63.158 30.85 17.83 41.84 2.69
4206 6629 4.126524 GCTTAGGGCGCCACTTAG 57.873 61.111 30.85 24.19 0.00 2.18
4215 6638 2.512515 CTCAGTGGCGCTTAGGGC 60.513 66.667 13.05 13.05 40.84 5.19
4216 6639 1.142748 CTCTCAGTGGCGCTTAGGG 59.857 63.158 7.64 1.94 0.00 3.53
4295 6718 2.436115 GAACGAAGGGAAGCCGGG 60.436 66.667 2.18 0.00 0.00 5.73
4298 6721 1.623973 CGAACGAACGAAGGGAAGCC 61.624 60.000 0.14 0.00 35.09 4.35
4303 6726 2.434134 CGAGCGAACGAACGAAGGG 61.434 63.158 9.67 0.00 35.09 3.95
4304 6727 3.055905 GCGAGCGAACGAACGAAGG 62.056 63.158 14.32 0.17 35.09 3.46
4305 6728 1.988696 GAGCGAGCGAACGAACGAAG 61.989 60.000 14.32 2.24 35.09 3.79
4306 6729 2.050714 AGCGAGCGAACGAACGAA 60.051 55.556 14.32 0.00 35.09 3.85
4307 6730 2.501222 GAGCGAGCGAACGAACGA 60.501 61.111 14.32 0.00 35.09 3.85
4308 6731 3.876162 CGAGCGAGCGAACGAACG 61.876 66.667 5.91 4.02 35.09 3.95
4309 6732 1.789591 GATCGAGCGAGCGAACGAAC 61.790 60.000 15.20 10.91 44.22 3.95
4310 6733 1.582937 GATCGAGCGAGCGAACGAA 60.583 57.895 15.20 4.26 44.22 3.85
4311 6734 2.022902 GATCGAGCGAGCGAACGA 59.977 61.111 14.13 14.13 44.22 3.85
4312 6735 1.867812 TTGATCGAGCGAGCGAACG 60.868 57.895 3.63 0.00 44.22 3.95
4313 6736 0.798771 AGTTGATCGAGCGAGCGAAC 60.799 55.000 0.00 7.32 44.22 3.95
4314 6737 0.730840 TAGTTGATCGAGCGAGCGAA 59.269 50.000 0.00 0.00 44.22 4.70
4315 6738 0.305009 CTAGTTGATCGAGCGAGCGA 59.695 55.000 3.63 2.60 45.22 4.93
4316 6739 0.658829 CCTAGTTGATCGAGCGAGCG 60.659 60.000 3.63 0.00 32.52 5.03
4317 6740 0.318275 CCCTAGTTGATCGAGCGAGC 60.318 60.000 0.61 0.61 0.00 5.03
4318 6741 1.025812 ACCCTAGTTGATCGAGCGAG 58.974 55.000 0.00 0.00 0.00 5.03
4319 6742 1.471119 AACCCTAGTTGATCGAGCGA 58.529 50.000 0.00 0.00 33.97 4.93
4348 6771 4.499019 CGGAAACAGAAGCTTAGCCAAAAA 60.499 41.667 0.00 0.00 0.00 1.94
4349 6772 3.004315 CGGAAACAGAAGCTTAGCCAAAA 59.996 43.478 0.00 0.00 0.00 2.44
4350 6773 2.552315 CGGAAACAGAAGCTTAGCCAAA 59.448 45.455 0.00 0.00 0.00 3.28
4351 6774 2.151202 CGGAAACAGAAGCTTAGCCAA 58.849 47.619 0.00 0.00 0.00 4.52
4352 6775 1.610624 CCGGAAACAGAAGCTTAGCCA 60.611 52.381 0.00 0.00 0.00 4.75
4353 6776 1.087501 CCGGAAACAGAAGCTTAGCC 58.912 55.000 0.00 0.00 0.00 3.93
4354 6777 1.087501 CCCGGAAACAGAAGCTTAGC 58.912 55.000 0.73 0.00 0.00 3.09
4355 6778 1.087501 GCCCGGAAACAGAAGCTTAG 58.912 55.000 0.73 0.00 0.00 2.18
4356 6779 0.690762 AGCCCGGAAACAGAAGCTTA 59.309 50.000 0.73 0.00 0.00 3.09
4357 6780 0.606673 GAGCCCGGAAACAGAAGCTT 60.607 55.000 0.73 0.00 0.00 3.74
4358 6781 1.003233 GAGCCCGGAAACAGAAGCT 60.003 57.895 0.73 0.00 0.00 3.74
4359 6782 0.678048 ATGAGCCCGGAAACAGAAGC 60.678 55.000 0.73 0.00 0.00 3.86
4360 6783 2.691409 TATGAGCCCGGAAACAGAAG 57.309 50.000 0.73 0.00 0.00 2.85
4361 6784 3.426787 TTTATGAGCCCGGAAACAGAA 57.573 42.857 0.73 0.00 0.00 3.02
4362 6785 3.644966 ATTTATGAGCCCGGAAACAGA 57.355 42.857 0.73 0.00 0.00 3.41
4363 6786 5.063204 TCATATTTATGAGCCCGGAAACAG 58.937 41.667 0.73 0.00 37.76 3.16
4364 6787 5.042463 TCATATTTATGAGCCCGGAAACA 57.958 39.130 0.73 0.00 37.76 2.83
4365 6788 6.385649 TTTCATATTTATGAGCCCGGAAAC 57.614 37.500 0.73 0.00 42.99 2.78
4366 6789 7.411486 TTTTTCATATTTATGAGCCCGGAAA 57.589 32.000 0.73 0.00 42.99 3.13
4394 6817 9.761504 TCATAATTTGTGATTTTTGTGTGTCAT 57.238 25.926 0.00 0.00 0.00 3.06
4395 6818 9.591792 TTCATAATTTGTGATTTTTGTGTGTCA 57.408 25.926 0.00 0.00 0.00 3.58
4531 6954 9.958234 TCGATGAATTGTTTTCAAAAACTATGA 57.042 25.926 16.77 7.43 46.37 2.15
4546 6969 9.311916 TGAACTTTTTCAAATTCGATGAATTGT 57.688 25.926 5.61 0.00 40.77 2.71
4549 6972 8.853345 CGATGAACTTTTTCAAATTCGATGAAT 58.147 29.630 1.02 0.00 45.01 2.57
4550 6973 8.073167 TCGATGAACTTTTTCAAATTCGATGAA 58.927 29.630 7.23 0.00 45.01 2.57
4551 6974 7.580600 TCGATGAACTTTTTCAAATTCGATGA 58.419 30.769 7.23 0.00 45.01 2.92
4552 6975 7.780253 TCGATGAACTTTTTCAAATTCGATG 57.220 32.000 7.23 0.00 45.01 3.84
4554 6977 8.795786 AAATCGATGAACTTTTTCAAATTCGA 57.204 26.923 11.73 11.73 46.72 3.71
4555 6978 9.293470 CAAAATCGATGAACTTTTTCAAATTCG 57.707 29.630 0.00 3.57 45.01 3.34
4631 7054 9.784680 CACCAAATTCAATGAAATTTTGTTCAA 57.215 25.926 16.26 0.00 40.76 2.69
4632 7055 9.170734 TCACCAAATTCAATGAAATTTTGTTCA 57.829 25.926 16.26 0.00 41.59 3.18
4639 7062 9.393512 TGAACTTTCACCAAATTCAATGAAATT 57.606 25.926 0.00 0.00 39.60 1.82
4640 7063 8.961294 TGAACTTTCACCAAATTCAATGAAAT 57.039 26.923 0.00 0.00 39.60 2.17
4641 7064 8.828644 CATGAACTTTCACCAAATTCAATGAAA 58.171 29.630 0.00 9.37 40.49 2.69
4642 7065 8.202811 TCATGAACTTTCACCAAATTCAATGAA 58.797 29.630 0.00 0.00 40.49 2.57
4643 7066 7.724287 TCATGAACTTTCACCAAATTCAATGA 58.276 30.769 0.00 0.00 40.49 2.57
4644 7067 7.949903 TCATGAACTTTCACCAAATTCAATG 57.050 32.000 0.00 0.00 40.49 2.82
4676 7099 8.934507 TCGTGGTTTTAATTCATGAACTTTTT 57.065 26.923 11.07 3.71 0.00 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.