Multiple sequence alignment - TraesCS2D01G407600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G407600 chr2D 100.000 3422 0 0 1 3422 522910142 522913563 0.000000e+00 6320
1 TraesCS2D01G407600 chr2D 74.763 1371 277 54 1037 2380 577609360 577608032 4.990000e-153 551
2 TraesCS2D01G407600 chr2D 79.677 620 114 12 1767 2380 522630451 522631064 1.460000e-118 436
3 TraesCS2D01G407600 chr2D 95.528 246 11 0 196 441 76127223 76126978 8.900000e-106 394
4 TraesCS2D01G407600 chr2D 90.335 269 22 4 184 448 13147019 13146751 1.950000e-92 350
5 TraesCS2D01G407600 chr2D 78.400 125 20 6 29 151 84757635 84757754 1.320000e-09 75
6 TraesCS2D01G407600 chr2A 90.348 2300 107 45 442 2676 668011294 668013543 0.000000e+00 2911
7 TraesCS2D01G407600 chr2A 76.264 1226 230 47 1037 2239 715806822 715808009 2.270000e-166 595
8 TraesCS2D01G407600 chr2A 80.196 611 109 12 1776 2380 667942968 667943572 6.740000e-122 448
9 TraesCS2D01G407600 chr2A 79.088 636 109 17 1606 2238 667964877 667965491 1.900000e-112 416
10 TraesCS2D01G407600 chr2A 90.645 310 22 2 3112 3421 668031261 668031563 4.110000e-109 405
11 TraesCS2D01G407600 chr2A 83.621 464 18 17 2668 3117 668030787 668031206 1.930000e-102 383
12 TraesCS2D01G407600 chr2B 92.188 1805 98 10 857 2637 615920602 615922387 0.000000e+00 2512
13 TraesCS2D01G407600 chr2B 93.590 468 25 3 2646 3111 615922565 615923029 0.000000e+00 693
14 TraesCS2D01G407600 chr2B 76.241 1229 225 49 1037 2239 694944110 694945297 1.060000e-164 590
15 TraesCS2D01G407600 chr2B 79.934 608 110 12 1779 2380 615578571 615579172 1.460000e-118 436
16 TraesCS2D01G407600 chr2B 82.713 376 33 9 510 859 615920192 615920561 4.290000e-79 305
17 TraesCS2D01G407600 chr2B 92.500 200 13 2 3223 3421 615923140 615923338 5.590000e-73 285
18 TraesCS2D01G407600 chr2B 86.585 246 28 4 510 752 615909023 615909266 2.020000e-67 267
19 TraesCS2D01G407600 chr1D 95.528 246 11 0 196 441 81451878 81452123 8.900000e-106 394
20 TraesCS2D01G407600 chr7B 92.339 248 19 0 193 440 20093667 20093914 1.510000e-93 353
21 TraesCS2D01G407600 chr7B 89.888 267 26 1 184 450 86844090 86844355 3.270000e-90 342
22 TraesCS2D01G407600 chr4D 90.800 250 22 1 188 437 9483827 9484075 1.970000e-87 333
23 TraesCS2D01G407600 chr4A 89.328 253 26 1 190 442 604576785 604577036 1.980000e-82 316
24 TraesCS2D01G407600 chr7D 88.446 251 26 3 193 441 185188381 185188630 2.000000e-77 300
25 TraesCS2D01G407600 chr7D 86.939 245 32 0 199 443 237416627 237416871 3.360000e-70 276


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G407600 chr2D 522910142 522913563 3421 False 6320.00 6320 100.00000 1 3422 1 chr2D.!!$F3 3421
1 TraesCS2D01G407600 chr2D 577608032 577609360 1328 True 551.00 551 74.76300 1037 2380 1 chr2D.!!$R3 1343
2 TraesCS2D01G407600 chr2D 522630451 522631064 613 False 436.00 436 79.67700 1767 2380 1 chr2D.!!$F2 613
3 TraesCS2D01G407600 chr2A 668011294 668013543 2249 False 2911.00 2911 90.34800 442 2676 1 chr2A.!!$F3 2234
4 TraesCS2D01G407600 chr2A 715806822 715808009 1187 False 595.00 595 76.26400 1037 2239 1 chr2A.!!$F4 1202
5 TraesCS2D01G407600 chr2A 667942968 667943572 604 False 448.00 448 80.19600 1776 2380 1 chr2A.!!$F1 604
6 TraesCS2D01G407600 chr2A 667964877 667965491 614 False 416.00 416 79.08800 1606 2238 1 chr2A.!!$F2 632
7 TraesCS2D01G407600 chr2A 668030787 668031563 776 False 394.00 405 87.13300 2668 3421 2 chr2A.!!$F5 753
8 TraesCS2D01G407600 chr2B 615920192 615923338 3146 False 948.75 2512 90.24775 510 3421 4 chr2B.!!$F4 2911
9 TraesCS2D01G407600 chr2B 694944110 694945297 1187 False 590.00 590 76.24100 1037 2239 1 chr2B.!!$F3 1202
10 TraesCS2D01G407600 chr2B 615578571 615579172 601 False 436.00 436 79.93400 1779 2380 1 chr2B.!!$F1 601

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
776 816 0.033796 CATGGGTGCCACCTCTCAAT 60.034 55.000 14.71 0.0 38.64 2.57 F
897 981 1.071699 ACGACCCTACAAATGTGCAGT 59.928 47.619 0.00 0.0 0.00 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1845 1963 0.108186 CAGGCAGCGAGGTCATTGTA 60.108 55.0 0.0 0.0 0.0 2.41 R
2565 2705 0.315568 AGAGTGCTGTTCGTGAGTCC 59.684 55.0 0.0 0.0 0.0 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.733608 CGTCTATGATATCACCAAACATAAGC 58.266 38.462 7.78 0.00 0.00 3.09
26 27 7.410835 CGTCTATGATATCACCAAACATAAGCG 60.411 40.741 7.78 0.00 0.00 4.68
27 28 4.811555 TGATATCACCAAACATAAGCGC 57.188 40.909 0.00 0.00 0.00 5.92
28 29 4.195416 TGATATCACCAAACATAAGCGCA 58.805 39.130 11.47 0.00 0.00 6.09
29 30 4.637977 TGATATCACCAAACATAAGCGCAA 59.362 37.500 11.47 0.00 0.00 4.85
30 31 3.932545 ATCACCAAACATAAGCGCAAA 57.067 38.095 11.47 0.00 0.00 3.68
31 32 3.717400 TCACCAAACATAAGCGCAAAA 57.283 38.095 11.47 0.00 0.00 2.44
32 33 4.250116 TCACCAAACATAAGCGCAAAAT 57.750 36.364 11.47 0.00 0.00 1.82
33 34 3.986572 TCACCAAACATAAGCGCAAAATG 59.013 39.130 11.47 12.55 0.00 2.32
34 35 3.123284 CACCAAACATAAGCGCAAAATGG 59.877 43.478 11.47 10.92 0.00 3.16
35 36 3.006323 ACCAAACATAAGCGCAAAATGGA 59.994 39.130 11.47 0.00 0.00 3.41
36 37 3.993081 CCAAACATAAGCGCAAAATGGAA 59.007 39.130 11.47 0.00 0.00 3.53
37 38 4.091800 CCAAACATAAGCGCAAAATGGAAG 59.908 41.667 11.47 4.20 0.00 3.46
38 39 4.782019 AACATAAGCGCAAAATGGAAGA 57.218 36.364 11.47 0.00 0.00 2.87
39 40 4.989279 ACATAAGCGCAAAATGGAAGAT 57.011 36.364 11.47 0.00 0.00 2.40
40 41 5.329035 ACATAAGCGCAAAATGGAAGATT 57.671 34.783 11.47 0.00 0.00 2.40
41 42 5.723295 ACATAAGCGCAAAATGGAAGATTT 58.277 33.333 11.47 0.00 0.00 2.17
42 43 6.862209 ACATAAGCGCAAAATGGAAGATTTA 58.138 32.000 11.47 0.00 0.00 1.40
43 44 6.751888 ACATAAGCGCAAAATGGAAGATTTAC 59.248 34.615 11.47 0.00 0.00 2.01
44 45 3.758300 AGCGCAAAATGGAAGATTTACG 58.242 40.909 11.47 0.00 0.00 3.18
45 46 2.851824 GCGCAAAATGGAAGATTTACGG 59.148 45.455 0.30 0.00 0.00 4.02
46 47 3.672241 GCGCAAAATGGAAGATTTACGGT 60.672 43.478 0.30 0.00 0.00 4.83
47 48 4.095610 CGCAAAATGGAAGATTTACGGTC 58.904 43.478 0.00 0.00 0.00 4.79
48 49 4.378978 CGCAAAATGGAAGATTTACGGTCA 60.379 41.667 0.00 0.00 0.00 4.02
49 50 5.465935 GCAAAATGGAAGATTTACGGTCAA 58.534 37.500 0.00 0.00 0.00 3.18
50 51 5.344933 GCAAAATGGAAGATTTACGGTCAAC 59.655 40.000 0.00 0.00 0.00 3.18
65 66 3.893720 GGTCAACGAAACTAGAAGTCGA 58.106 45.455 17.13 0.00 38.16 4.20
66 67 3.667726 GGTCAACGAAACTAGAAGTCGAC 59.332 47.826 7.70 7.70 38.16 4.20
67 68 3.667726 GTCAACGAAACTAGAAGTCGACC 59.332 47.826 13.01 0.00 38.16 4.79
68 69 2.608467 ACGAAACTAGAAGTCGACCG 57.392 50.000 13.01 7.72 38.16 4.79
69 70 1.257539 CGAAACTAGAAGTCGACCGC 58.742 55.000 13.01 4.38 36.92 5.68
70 71 1.400629 CGAAACTAGAAGTCGACCGCA 60.401 52.381 13.01 0.00 36.92 5.69
71 72 1.984297 GAAACTAGAAGTCGACCGCAC 59.016 52.381 13.01 1.32 0.00 5.34
72 73 0.109873 AACTAGAAGTCGACCGCACG 60.110 55.000 13.01 0.91 0.00 5.34
73 74 1.226323 CTAGAAGTCGACCGCACGG 60.226 63.158 13.01 7.71 42.03 4.94
74 75 1.642037 CTAGAAGTCGACCGCACGGA 61.642 60.000 17.40 0.00 38.96 4.69
75 76 1.028330 TAGAAGTCGACCGCACGGAT 61.028 55.000 17.40 0.00 38.96 4.18
76 77 1.028330 AGAAGTCGACCGCACGGATA 61.028 55.000 17.40 0.00 38.96 2.59
77 78 0.179156 GAAGTCGACCGCACGGATAA 60.179 55.000 17.40 0.00 38.96 1.75
78 79 0.244450 AAGTCGACCGCACGGATAAA 59.756 50.000 17.40 0.00 38.96 1.40
79 80 0.179145 AGTCGACCGCACGGATAAAG 60.179 55.000 17.40 2.21 38.96 1.85
80 81 0.457337 GTCGACCGCACGGATAAAGT 60.457 55.000 17.40 0.00 38.96 2.66
81 82 0.179156 TCGACCGCACGGATAAAGTC 60.179 55.000 17.40 0.30 38.96 3.01
82 83 0.457166 CGACCGCACGGATAAAGTCA 60.457 55.000 17.40 0.00 38.96 3.41
83 84 0.997196 GACCGCACGGATAAAGTCAC 59.003 55.000 17.40 0.00 38.96 3.67
84 85 0.390735 ACCGCACGGATAAAGTCACC 60.391 55.000 17.40 0.00 38.96 4.02
85 86 0.390603 CCGCACGGATAAAGTCACCA 60.391 55.000 2.01 0.00 37.50 4.17
86 87 0.719465 CGCACGGATAAAGTCACCAC 59.281 55.000 0.00 0.00 0.00 4.16
87 88 1.803334 GCACGGATAAAGTCACCACA 58.197 50.000 0.00 0.00 0.00 4.17
88 89 2.356135 GCACGGATAAAGTCACCACAT 58.644 47.619 0.00 0.00 0.00 3.21
89 90 2.351726 GCACGGATAAAGTCACCACATC 59.648 50.000 0.00 0.00 0.00 3.06
90 91 2.603110 CACGGATAAAGTCACCACATCG 59.397 50.000 0.00 0.00 0.00 3.84
91 92 2.494471 ACGGATAAAGTCACCACATCGA 59.506 45.455 0.00 0.00 0.00 3.59
92 93 3.132289 ACGGATAAAGTCACCACATCGAT 59.868 43.478 0.00 0.00 0.00 3.59
93 94 3.490896 CGGATAAAGTCACCACATCGATG 59.509 47.826 23.68 23.68 0.00 3.84
94 95 4.442706 GGATAAAGTCACCACATCGATGT 58.557 43.478 25.18 25.18 42.84 3.06
133 134 5.731599 GAGTTGATCTCAAATCGAAGCAT 57.268 39.130 4.81 0.00 40.39 3.79
134 135 6.116680 GAGTTGATCTCAAATCGAAGCATT 57.883 37.500 4.81 0.00 40.39 3.56
135 136 7.239166 GAGTTGATCTCAAATCGAAGCATTA 57.761 36.000 4.81 0.00 40.39 1.90
136 137 7.798596 AGTTGATCTCAAATCGAAGCATTAT 57.201 32.000 0.00 0.00 37.63 1.28
137 138 8.218338 AGTTGATCTCAAATCGAAGCATTATT 57.782 30.769 0.00 0.00 37.63 1.40
138 139 8.127327 AGTTGATCTCAAATCGAAGCATTATTG 58.873 33.333 0.00 0.00 37.63 1.90
139 140 7.558161 TGATCTCAAATCGAAGCATTATTGT 57.442 32.000 0.00 0.00 0.00 2.71
140 141 7.988737 TGATCTCAAATCGAAGCATTATTGTT 58.011 30.769 0.00 0.00 0.00 2.83
141 142 8.461222 TGATCTCAAATCGAAGCATTATTGTTT 58.539 29.630 0.00 0.00 0.00 2.83
142 143 9.935682 GATCTCAAATCGAAGCATTATTGTTTA 57.064 29.630 0.00 0.00 0.00 2.01
180 181 6.716934 AGATGAAGAAGATTAAGTAGGCGA 57.283 37.500 0.00 0.00 0.00 5.54
181 182 6.744112 AGATGAAGAAGATTAAGTAGGCGAG 58.256 40.000 0.00 0.00 0.00 5.03
182 183 4.683832 TGAAGAAGATTAAGTAGGCGAGC 58.316 43.478 0.00 0.00 0.00 5.03
183 184 4.159693 TGAAGAAGATTAAGTAGGCGAGCA 59.840 41.667 0.00 0.00 0.00 4.26
184 185 4.048241 AGAAGATTAAGTAGGCGAGCAC 57.952 45.455 0.00 0.00 0.00 4.40
185 186 3.447586 AGAAGATTAAGTAGGCGAGCACA 59.552 43.478 0.00 0.00 0.00 4.57
186 187 3.887621 AGATTAAGTAGGCGAGCACAA 57.112 42.857 0.00 0.00 0.00 3.33
187 188 3.522553 AGATTAAGTAGGCGAGCACAAC 58.477 45.455 0.00 0.00 0.00 3.32
188 189 2.823924 TTAAGTAGGCGAGCACAACA 57.176 45.000 0.00 0.00 0.00 3.33
189 190 2.074547 TAAGTAGGCGAGCACAACAC 57.925 50.000 0.00 0.00 0.00 3.32
190 191 0.105964 AAGTAGGCGAGCACAACACA 59.894 50.000 0.00 0.00 0.00 3.72
191 192 0.105964 AGTAGGCGAGCACAACACAA 59.894 50.000 0.00 0.00 0.00 3.33
192 193 0.512952 GTAGGCGAGCACAACACAAG 59.487 55.000 0.00 0.00 0.00 3.16
193 194 0.602638 TAGGCGAGCACAACACAAGG 60.603 55.000 0.00 0.00 0.00 3.61
194 195 1.891919 GGCGAGCACAACACAAGGA 60.892 57.895 0.00 0.00 0.00 3.36
195 196 1.444119 GGCGAGCACAACACAAGGAA 61.444 55.000 0.00 0.00 0.00 3.36
196 197 0.380378 GCGAGCACAACACAAGGAAA 59.620 50.000 0.00 0.00 0.00 3.13
197 198 1.202245 GCGAGCACAACACAAGGAAAA 60.202 47.619 0.00 0.00 0.00 2.29
198 199 2.733858 GCGAGCACAACACAAGGAAAAA 60.734 45.455 0.00 0.00 0.00 1.94
199 200 3.705604 CGAGCACAACACAAGGAAAAAT 58.294 40.909 0.00 0.00 0.00 1.82
200 201 4.791411 GCGAGCACAACACAAGGAAAAATA 60.791 41.667 0.00 0.00 0.00 1.40
201 202 5.460646 CGAGCACAACACAAGGAAAAATAT 58.539 37.500 0.00 0.00 0.00 1.28
202 203 5.569059 CGAGCACAACACAAGGAAAAATATC 59.431 40.000 0.00 0.00 0.00 1.63
203 204 6.568462 CGAGCACAACACAAGGAAAAATATCT 60.568 38.462 0.00 0.00 0.00 1.98
204 205 7.360861 CGAGCACAACACAAGGAAAAATATCTA 60.361 37.037 0.00 0.00 0.00 1.98
205 206 7.820648 AGCACAACACAAGGAAAAATATCTAG 58.179 34.615 0.00 0.00 0.00 2.43
206 207 7.448469 AGCACAACACAAGGAAAAATATCTAGT 59.552 33.333 0.00 0.00 0.00 2.57
207 208 7.538678 GCACAACACAAGGAAAAATATCTAGTG 59.461 37.037 0.00 0.00 0.00 2.74
208 209 7.538678 CACAACACAAGGAAAAATATCTAGTGC 59.461 37.037 0.00 0.00 0.00 4.40
209 210 7.448469 ACAACACAAGGAAAAATATCTAGTGCT 59.552 33.333 0.00 0.00 0.00 4.40
210 211 8.946085 CAACACAAGGAAAAATATCTAGTGCTA 58.054 33.333 0.00 0.00 0.00 3.49
211 212 8.494016 ACACAAGGAAAAATATCTAGTGCTAC 57.506 34.615 0.00 0.00 0.00 3.58
212 213 7.553044 ACACAAGGAAAAATATCTAGTGCTACC 59.447 37.037 0.00 0.00 0.00 3.18
213 214 7.552687 CACAAGGAAAAATATCTAGTGCTACCA 59.447 37.037 0.00 0.00 0.00 3.25
214 215 8.107095 ACAAGGAAAAATATCTAGTGCTACCAA 58.893 33.333 0.00 0.00 0.00 3.67
215 216 8.616076 CAAGGAAAAATATCTAGTGCTACCAAG 58.384 37.037 0.00 0.00 0.00 3.61
216 217 7.862675 AGGAAAAATATCTAGTGCTACCAAGT 58.137 34.615 0.00 0.00 0.00 3.16
217 218 8.329502 AGGAAAAATATCTAGTGCTACCAAGTT 58.670 33.333 0.00 0.00 0.00 2.66
218 219 8.957466 GGAAAAATATCTAGTGCTACCAAGTTT 58.043 33.333 0.00 0.00 0.00 2.66
222 223 9.614792 AAATATCTAGTGCTACCAAGTTTTAGG 57.385 33.333 0.00 0.00 0.00 2.69
223 224 6.622427 ATCTAGTGCTACCAAGTTTTAGGT 57.378 37.500 0.00 0.00 41.89 3.08
224 225 5.790593 TCTAGTGCTACCAAGTTTTAGGTG 58.209 41.667 0.00 0.00 38.87 4.00
225 226 3.146847 AGTGCTACCAAGTTTTAGGTGC 58.853 45.455 0.00 0.00 38.87 5.01
226 227 3.146847 GTGCTACCAAGTTTTAGGTGCT 58.853 45.455 0.00 0.00 38.87 4.40
227 228 4.041198 AGTGCTACCAAGTTTTAGGTGCTA 59.959 41.667 0.00 0.00 38.87 3.49
228 229 4.153655 GTGCTACCAAGTTTTAGGTGCTAC 59.846 45.833 0.00 0.00 38.87 3.58
229 230 3.688185 GCTACCAAGTTTTAGGTGCTACC 59.312 47.826 0.00 0.00 38.87 3.18
230 231 3.868619 ACCAAGTTTTAGGTGCTACCA 57.131 42.857 7.86 0.00 41.95 3.25
231 232 4.382386 ACCAAGTTTTAGGTGCTACCAT 57.618 40.909 7.86 0.00 41.95 3.55
232 233 4.079253 ACCAAGTTTTAGGTGCTACCATG 58.921 43.478 7.86 0.00 41.95 3.66
233 234 4.202524 ACCAAGTTTTAGGTGCTACCATGA 60.203 41.667 0.00 0.00 41.95 3.07
234 235 4.949856 CCAAGTTTTAGGTGCTACCATGAT 59.050 41.667 0.00 0.00 41.95 2.45
235 236 6.119536 CCAAGTTTTAGGTGCTACCATGATA 58.880 40.000 0.00 0.00 41.95 2.15
236 237 6.038271 CCAAGTTTTAGGTGCTACCATGATAC 59.962 42.308 0.00 0.91 41.95 2.24
237 238 6.308015 AGTTTTAGGTGCTACCATGATACA 57.692 37.500 0.00 0.00 41.95 2.29
238 239 6.717289 AGTTTTAGGTGCTACCATGATACAA 58.283 36.000 0.00 0.00 41.95 2.41
239 240 6.823689 AGTTTTAGGTGCTACCATGATACAAG 59.176 38.462 0.00 0.00 41.95 3.16
240 241 3.199880 AGGTGCTACCATGATACAAGC 57.800 47.619 0.00 0.00 41.95 4.01
241 242 2.505407 AGGTGCTACCATGATACAAGCA 59.495 45.455 0.00 0.00 41.95 3.91
242 243 3.137176 AGGTGCTACCATGATACAAGCAT 59.863 43.478 0.00 0.00 44.30 3.79
243 244 3.499918 GGTGCTACCATGATACAAGCATC 59.500 47.826 0.00 0.00 44.30 3.91
244 245 4.384056 GTGCTACCATGATACAAGCATCT 58.616 43.478 0.00 0.00 44.30 2.90
245 246 4.450419 GTGCTACCATGATACAAGCATCTC 59.550 45.833 0.00 0.00 44.30 2.75
246 247 3.677121 GCTACCATGATACAAGCATCTCG 59.323 47.826 0.00 0.00 33.38 4.04
247 248 3.117491 ACCATGATACAAGCATCTCGG 57.883 47.619 0.00 0.00 0.00 4.63
248 249 1.802960 CCATGATACAAGCATCTCGGC 59.197 52.381 0.00 0.00 0.00 5.54
249 250 1.802960 CATGATACAAGCATCTCGGCC 59.197 52.381 0.00 0.00 0.00 6.13
250 251 0.249447 TGATACAAGCATCTCGGCCG 60.249 55.000 22.12 22.12 0.00 6.13
251 252 0.249489 GATACAAGCATCTCGGCCGT 60.249 55.000 27.15 1.97 0.00 5.68
252 253 0.178068 ATACAAGCATCTCGGCCGTT 59.822 50.000 27.15 7.98 0.00 4.44
253 254 0.739462 TACAAGCATCTCGGCCGTTG 60.739 55.000 27.15 22.36 0.00 4.10
254 255 2.436646 AAGCATCTCGGCCGTTGG 60.437 61.111 27.15 16.42 0.00 3.77
255 256 2.954684 AAGCATCTCGGCCGTTGGA 61.955 57.895 27.15 21.06 0.00 3.53
256 257 2.203070 GCATCTCGGCCGTTGGAT 60.203 61.111 27.15 22.27 0.00 3.41
257 258 1.819632 GCATCTCGGCCGTTGGATT 60.820 57.895 27.15 9.22 0.00 3.01
258 259 1.776034 GCATCTCGGCCGTTGGATTC 61.776 60.000 27.15 16.81 0.00 2.52
259 260 0.179073 CATCTCGGCCGTTGGATTCT 60.179 55.000 27.15 4.81 0.00 2.40
260 261 0.105039 ATCTCGGCCGTTGGATTCTC 59.895 55.000 27.15 0.00 0.00 2.87
261 262 1.218047 CTCGGCCGTTGGATTCTCA 59.782 57.895 27.15 0.00 0.00 3.27
262 263 0.807667 CTCGGCCGTTGGATTCTCAG 60.808 60.000 27.15 6.93 0.00 3.35
263 264 1.218047 CGGCCGTTGGATTCTCAGA 59.782 57.895 19.50 0.00 0.00 3.27
264 265 0.179073 CGGCCGTTGGATTCTCAGAT 60.179 55.000 19.50 0.00 0.00 2.90
265 266 1.587547 GGCCGTTGGATTCTCAGATC 58.412 55.000 0.00 0.00 0.00 2.75
266 267 1.139853 GGCCGTTGGATTCTCAGATCT 59.860 52.381 0.00 0.00 0.00 2.75
267 268 2.208431 GCCGTTGGATTCTCAGATCTG 58.792 52.381 17.07 17.07 0.00 2.90
268 269 2.159043 GCCGTTGGATTCTCAGATCTGA 60.159 50.000 23.75 23.75 38.06 3.27
269 270 3.494048 GCCGTTGGATTCTCAGATCTGAT 60.494 47.826 25.30 11.46 39.13 2.90
270 271 4.056740 CCGTTGGATTCTCAGATCTGATG 58.943 47.826 25.30 18.23 39.13 3.07
271 272 4.056740 CGTTGGATTCTCAGATCTGATGG 58.943 47.826 25.30 14.98 39.13 3.51
272 273 3.766068 TGGATTCTCAGATCTGATGGC 57.234 47.619 25.30 14.43 39.13 4.40
273 274 3.315596 TGGATTCTCAGATCTGATGGCT 58.684 45.455 25.30 10.84 39.13 4.75
274 275 3.324268 TGGATTCTCAGATCTGATGGCTC 59.676 47.826 25.30 17.71 39.13 4.70
275 276 3.579586 GGATTCTCAGATCTGATGGCTCT 59.420 47.826 25.30 7.80 39.13 4.09
276 277 4.322198 GGATTCTCAGATCTGATGGCTCTC 60.322 50.000 25.30 14.99 39.13 3.20
277 278 3.309600 TCTCAGATCTGATGGCTCTCA 57.690 47.619 25.30 0.28 39.13 3.27
278 279 3.639952 TCTCAGATCTGATGGCTCTCAA 58.360 45.455 25.30 0.00 39.13 3.02
279 280 4.224762 TCTCAGATCTGATGGCTCTCAAT 58.775 43.478 25.30 0.00 39.13 2.57
280 281 5.392125 TCTCAGATCTGATGGCTCTCAATA 58.608 41.667 25.30 0.00 39.13 1.90
281 282 5.837438 TCTCAGATCTGATGGCTCTCAATAA 59.163 40.000 25.30 0.00 39.13 1.40
282 283 5.851720 TCAGATCTGATGGCTCTCAATAAC 58.148 41.667 21.67 0.00 34.14 1.89
283 284 5.601729 TCAGATCTGATGGCTCTCAATAACT 59.398 40.000 21.67 0.00 34.14 2.24
284 285 5.927689 CAGATCTGATGGCTCTCAATAACTC 59.072 44.000 18.34 0.00 0.00 3.01
285 286 5.840149 AGATCTGATGGCTCTCAATAACTCT 59.160 40.000 0.00 0.00 0.00 3.24
286 287 5.273674 TCTGATGGCTCTCAATAACTCTG 57.726 43.478 0.00 0.00 0.00 3.35
287 288 3.801698 TGATGGCTCTCAATAACTCTGC 58.198 45.455 0.00 0.00 0.00 4.26
288 289 3.198417 TGATGGCTCTCAATAACTCTGCA 59.802 43.478 0.00 0.00 0.00 4.41
289 290 3.701205 TGGCTCTCAATAACTCTGCAA 57.299 42.857 0.00 0.00 0.00 4.08
290 291 4.226427 TGGCTCTCAATAACTCTGCAAT 57.774 40.909 0.00 0.00 0.00 3.56
291 292 5.357742 TGGCTCTCAATAACTCTGCAATA 57.642 39.130 0.00 0.00 0.00 1.90
292 293 5.933617 TGGCTCTCAATAACTCTGCAATAT 58.066 37.500 0.00 0.00 0.00 1.28
293 294 6.359804 TGGCTCTCAATAACTCTGCAATATT 58.640 36.000 0.00 0.00 0.00 1.28
294 295 6.830324 TGGCTCTCAATAACTCTGCAATATTT 59.170 34.615 0.00 0.00 0.00 1.40
295 296 7.137426 GGCTCTCAATAACTCTGCAATATTTG 58.863 38.462 0.00 0.00 0.00 2.32
311 312 7.264448 CAATATTTGCAAAAACACCTACGAG 57.736 36.000 17.19 0.00 0.00 4.18
312 313 3.701532 TTTGCAAAAACACCTACGAGG 57.298 42.857 10.02 0.00 42.49 4.63
313 314 2.623878 TGCAAAAACACCTACGAGGA 57.376 45.000 7.76 0.00 37.67 3.71
314 315 2.489971 TGCAAAAACACCTACGAGGAG 58.510 47.619 7.76 3.00 37.67 3.69
315 316 2.158871 TGCAAAAACACCTACGAGGAGT 60.159 45.455 7.76 3.57 41.04 3.85
316 317 2.479275 GCAAAAACACCTACGAGGAGTC 59.521 50.000 7.76 0.00 38.26 3.36
317 318 3.064931 CAAAAACACCTACGAGGAGTCC 58.935 50.000 0.00 0.00 38.26 3.85
318 319 2.005370 AAACACCTACGAGGAGTCCA 57.995 50.000 12.86 0.00 38.26 4.02
319 320 2.005370 AACACCTACGAGGAGTCCAA 57.995 50.000 12.86 0.00 38.26 3.53
320 321 2.005370 ACACCTACGAGGAGTCCAAA 57.995 50.000 12.86 0.00 33.84 3.28
321 322 2.322658 ACACCTACGAGGAGTCCAAAA 58.677 47.619 12.86 0.00 33.84 2.44
322 323 2.701951 ACACCTACGAGGAGTCCAAAAA 59.298 45.455 12.86 0.00 33.84 1.94
323 324 3.326880 ACACCTACGAGGAGTCCAAAAAT 59.673 43.478 12.86 0.00 33.84 1.82
324 325 4.202430 ACACCTACGAGGAGTCCAAAAATT 60.202 41.667 12.86 0.00 33.84 1.82
325 326 4.154195 CACCTACGAGGAGTCCAAAAATTG 59.846 45.833 12.86 0.00 37.67 2.32
326 327 4.202430 ACCTACGAGGAGTCCAAAAATTGT 60.202 41.667 12.86 2.66 37.67 2.71
327 328 4.154195 CCTACGAGGAGTCCAAAAATTGTG 59.846 45.833 12.86 0.00 37.67 3.33
328 329 2.293399 ACGAGGAGTCCAAAAATTGTGC 59.707 45.455 12.86 0.00 0.00 4.57
329 330 2.293122 CGAGGAGTCCAAAAATTGTGCA 59.707 45.455 12.86 0.00 0.00 4.57
330 331 3.057315 CGAGGAGTCCAAAAATTGTGCAT 60.057 43.478 12.86 0.00 0.00 3.96
331 332 4.488879 GAGGAGTCCAAAAATTGTGCATC 58.511 43.478 12.86 0.00 0.00 3.91
332 333 3.896888 AGGAGTCCAAAAATTGTGCATCA 59.103 39.130 12.86 0.00 0.00 3.07
333 334 4.021719 AGGAGTCCAAAAATTGTGCATCAG 60.022 41.667 12.86 0.00 0.00 2.90
334 335 4.262164 GGAGTCCAAAAATTGTGCATCAGT 60.262 41.667 3.60 0.00 0.00 3.41
335 336 4.874970 AGTCCAAAAATTGTGCATCAGTC 58.125 39.130 0.00 0.00 0.00 3.51
336 337 3.989817 GTCCAAAAATTGTGCATCAGTCC 59.010 43.478 0.00 0.00 0.00 3.85
337 338 3.640498 TCCAAAAATTGTGCATCAGTCCA 59.360 39.130 0.00 0.00 0.00 4.02
338 339 3.991773 CCAAAAATTGTGCATCAGTCCAG 59.008 43.478 0.00 0.00 0.00 3.86
339 340 3.308438 AAAATTGTGCATCAGTCCAGC 57.692 42.857 0.00 0.00 0.00 4.85
340 341 1.913778 AATTGTGCATCAGTCCAGCA 58.086 45.000 0.00 0.00 35.63 4.41
341 342 1.460504 ATTGTGCATCAGTCCAGCAG 58.539 50.000 0.00 0.00 39.21 4.24
342 343 0.397564 TTGTGCATCAGTCCAGCAGA 59.602 50.000 0.00 0.00 39.21 4.26
343 344 0.616891 TGTGCATCAGTCCAGCAGAT 59.383 50.000 0.00 0.00 39.21 2.90
344 345 1.003928 TGTGCATCAGTCCAGCAGATT 59.996 47.619 0.00 0.00 39.21 2.40
345 346 1.669779 GTGCATCAGTCCAGCAGATTC 59.330 52.381 0.00 0.00 39.21 2.52
346 347 1.279846 TGCATCAGTCCAGCAGATTCA 59.720 47.619 0.00 0.00 33.75 2.57
347 348 2.290450 TGCATCAGTCCAGCAGATTCAA 60.290 45.455 0.00 0.00 33.75 2.69
348 349 2.097142 GCATCAGTCCAGCAGATTCAAC 59.903 50.000 0.00 0.00 0.00 3.18
349 350 3.340928 CATCAGTCCAGCAGATTCAACA 58.659 45.455 0.00 0.00 0.00 3.33
350 351 3.490439 TCAGTCCAGCAGATTCAACAA 57.510 42.857 0.00 0.00 0.00 2.83
351 352 3.141398 TCAGTCCAGCAGATTCAACAAC 58.859 45.455 0.00 0.00 0.00 3.32
352 353 3.144506 CAGTCCAGCAGATTCAACAACT 58.855 45.455 0.00 0.00 0.00 3.16
353 354 3.188048 CAGTCCAGCAGATTCAACAACTC 59.812 47.826 0.00 0.00 0.00 3.01
354 355 2.485814 GTCCAGCAGATTCAACAACTCC 59.514 50.000 0.00 0.00 0.00 3.85
355 356 1.815003 CCAGCAGATTCAACAACTCCC 59.185 52.381 0.00 0.00 0.00 4.30
356 357 1.466167 CAGCAGATTCAACAACTCCCG 59.534 52.381 0.00 0.00 0.00 5.14
357 358 0.804989 GCAGATTCAACAACTCCCGG 59.195 55.000 0.00 0.00 0.00 5.73
358 359 1.610624 GCAGATTCAACAACTCCCGGA 60.611 52.381 0.73 0.00 0.00 5.14
359 360 2.941415 GCAGATTCAACAACTCCCGGAT 60.941 50.000 0.73 0.00 0.00 4.18
360 361 2.679837 CAGATTCAACAACTCCCGGATG 59.320 50.000 0.73 0.00 0.00 3.51
361 362 1.401905 GATTCAACAACTCCCGGATGC 59.598 52.381 0.73 0.00 0.00 3.91
362 363 0.608035 TTCAACAACTCCCGGATGCC 60.608 55.000 0.73 0.00 0.00 4.40
364 365 2.890766 AACAACTCCCGGATGCCGT 61.891 57.895 0.73 0.00 46.80 5.68
365 366 2.511600 CAACTCCCGGATGCCGTC 60.512 66.667 0.73 0.00 46.80 4.79
366 367 3.782443 AACTCCCGGATGCCGTCC 61.782 66.667 0.73 0.00 46.80 4.79
375 376 2.910688 GGATGCCGTCCAATCTAAGA 57.089 50.000 0.00 0.00 46.96 2.10
376 377 3.194005 GGATGCCGTCCAATCTAAGAA 57.806 47.619 0.00 0.00 46.96 2.52
377 378 3.744660 GGATGCCGTCCAATCTAAGAAT 58.255 45.455 0.00 0.00 46.96 2.40
378 379 3.748568 GGATGCCGTCCAATCTAAGAATC 59.251 47.826 0.00 0.00 46.96 2.52
379 380 3.194005 TGCCGTCCAATCTAAGAATCC 57.806 47.619 0.00 0.00 0.00 3.01
380 381 2.135933 GCCGTCCAATCTAAGAATCCG 58.864 52.381 0.00 0.00 0.00 4.18
381 382 2.223971 GCCGTCCAATCTAAGAATCCGA 60.224 50.000 0.00 0.00 0.00 4.55
382 383 3.381949 CCGTCCAATCTAAGAATCCGAC 58.618 50.000 0.00 0.00 0.00 4.79
383 384 3.043586 CGTCCAATCTAAGAATCCGACG 58.956 50.000 0.00 0.00 36.34 5.12
384 385 3.381949 GTCCAATCTAAGAATCCGACGG 58.618 50.000 7.84 7.84 0.00 4.79
385 386 2.135933 CCAATCTAAGAATCCGACGGC 58.864 52.381 9.66 0.00 0.00 5.68
386 387 2.135933 CAATCTAAGAATCCGACGGCC 58.864 52.381 9.66 0.00 0.00 6.13
387 388 0.680061 ATCTAAGAATCCGACGGCCC 59.320 55.000 9.66 0.13 0.00 5.80
388 389 0.685131 TCTAAGAATCCGACGGCCCA 60.685 55.000 9.66 0.00 0.00 5.36
389 390 0.249489 CTAAGAATCCGACGGCCCAG 60.249 60.000 9.66 0.00 0.00 4.45
390 391 0.685131 TAAGAATCCGACGGCCCAGA 60.685 55.000 9.66 0.00 0.00 3.86
391 392 1.338136 AAGAATCCGACGGCCCAGAT 61.338 55.000 9.66 0.00 0.00 2.90
392 393 1.595382 GAATCCGACGGCCCAGATG 60.595 63.158 9.66 0.00 0.00 2.90
393 394 3.757248 AATCCGACGGCCCAGATGC 62.757 63.158 9.66 0.00 0.00 3.91
400 401 4.751431 GGCCCAGATGCCCATATC 57.249 61.111 0.00 0.00 46.11 1.63
401 402 1.769665 GGCCCAGATGCCCATATCA 59.230 57.895 0.00 0.00 46.11 2.15
402 403 0.610232 GGCCCAGATGCCCATATCAC 60.610 60.000 0.00 0.00 46.11 3.06
403 404 0.957395 GCCCAGATGCCCATATCACG 60.957 60.000 0.00 0.00 0.00 4.35
404 405 0.321919 CCCAGATGCCCATATCACGG 60.322 60.000 0.00 0.00 0.00 4.94
405 406 0.397941 CCAGATGCCCATATCACGGT 59.602 55.000 0.00 0.00 0.00 4.83
406 407 1.623311 CCAGATGCCCATATCACGGTA 59.377 52.381 0.00 0.00 0.00 4.02
407 408 2.354103 CCAGATGCCCATATCACGGTAG 60.354 54.545 0.00 0.00 0.00 3.18
408 409 2.300152 CAGATGCCCATATCACGGTAGT 59.700 50.000 0.00 0.00 0.00 2.73
409 410 3.509967 CAGATGCCCATATCACGGTAGTA 59.490 47.826 0.00 0.00 0.00 1.82
410 411 4.160439 CAGATGCCCATATCACGGTAGTAT 59.840 45.833 0.00 0.00 0.00 2.12
411 412 4.777896 AGATGCCCATATCACGGTAGTATT 59.222 41.667 0.00 0.00 0.00 1.89
412 413 4.967084 TGCCCATATCACGGTAGTATTT 57.033 40.909 0.00 0.00 0.00 1.40
413 414 6.439375 AGATGCCCATATCACGGTAGTATTTA 59.561 38.462 0.00 0.00 0.00 1.40
414 415 6.422344 TGCCCATATCACGGTAGTATTTAA 57.578 37.500 0.00 0.00 0.00 1.52
415 416 6.460781 TGCCCATATCACGGTAGTATTTAAG 58.539 40.000 0.00 0.00 0.00 1.85
416 417 5.350640 GCCCATATCACGGTAGTATTTAAGC 59.649 44.000 0.00 0.00 0.00 3.09
417 418 5.873164 CCCATATCACGGTAGTATTTAAGCC 59.127 44.000 0.00 0.00 0.00 4.35
418 419 6.295688 CCCATATCACGGTAGTATTTAAGCCT 60.296 42.308 0.00 0.00 0.00 4.58
419 420 6.812160 CCATATCACGGTAGTATTTAAGCCTC 59.188 42.308 0.00 0.00 0.00 4.70
420 421 4.297299 TCACGGTAGTATTTAAGCCTCG 57.703 45.455 0.00 0.00 0.00 4.63
421 422 3.067180 TCACGGTAGTATTTAAGCCTCGG 59.933 47.826 0.00 0.00 0.00 4.63
422 423 3.026694 ACGGTAGTATTTAAGCCTCGGT 58.973 45.455 0.00 0.00 0.00 4.69
423 424 4.036734 CACGGTAGTATTTAAGCCTCGGTA 59.963 45.833 0.00 0.00 0.00 4.02
424 425 4.276926 ACGGTAGTATTTAAGCCTCGGTAG 59.723 45.833 0.00 0.00 0.00 3.18
425 426 4.554292 GGTAGTATTTAAGCCTCGGTAGC 58.446 47.826 0.00 0.00 0.00 3.58
426 427 4.038402 GGTAGTATTTAAGCCTCGGTAGCA 59.962 45.833 0.00 0.00 0.00 3.49
427 428 4.056092 AGTATTTAAGCCTCGGTAGCAC 57.944 45.455 0.00 0.00 0.00 4.40
428 429 2.327200 ATTTAAGCCTCGGTAGCACC 57.673 50.000 0.00 0.00 34.05 5.01
439 440 0.960286 GGTAGCACCGGATACTCTCC 59.040 60.000 9.46 5.13 41.07 3.71
440 441 0.960286 GTAGCACCGGATACTCTCCC 59.040 60.000 9.46 0.00 41.49 4.30
473 478 1.008538 GTGCAAACCTTCCAGCACG 60.009 57.895 0.00 0.00 46.35 5.34
485 490 2.919856 AGCACGGTCAGAGCCACT 60.920 61.111 0.00 0.00 37.13 4.00
559 569 1.079405 GGTCGATTCAGCCGTTCCA 60.079 57.895 0.00 0.00 0.00 3.53
578 588 4.087907 TCCACAAAAGGCATGATGATTGA 58.912 39.130 0.00 0.00 0.00 2.57
633 644 3.730061 GCAATGCTCACATGCTACAGAAC 60.730 47.826 0.00 0.00 36.36 3.01
634 645 1.713597 TGCTCACATGCTACAGAACG 58.286 50.000 0.00 0.00 0.00 3.95
647 662 4.156008 GCTACAGAACGGACCAAATTTGAT 59.844 41.667 19.86 1.03 0.00 2.57
776 816 0.033796 CATGGGTGCCACCTCTCAAT 60.034 55.000 14.71 0.00 38.64 2.57
832 873 4.308458 CACTTCCGACCGCACCCA 62.308 66.667 0.00 0.00 0.00 4.51
833 874 4.309950 ACTTCCGACCGCACCCAC 62.310 66.667 0.00 0.00 0.00 4.61
892 976 2.300723 TGCTACACGACCCTACAAATGT 59.699 45.455 0.00 0.00 0.00 2.71
893 977 2.671396 GCTACACGACCCTACAAATGTG 59.329 50.000 0.00 0.00 0.00 3.21
894 978 1.519408 ACACGACCCTACAAATGTGC 58.481 50.000 0.00 0.00 0.00 4.57
895 979 1.202710 ACACGACCCTACAAATGTGCA 60.203 47.619 0.00 0.00 0.00 4.57
896 980 1.464608 CACGACCCTACAAATGTGCAG 59.535 52.381 0.00 0.00 0.00 4.41
897 981 1.071699 ACGACCCTACAAATGTGCAGT 59.928 47.619 0.00 0.00 0.00 4.40
938 1022 7.064253 GTGGCATGTACTTAGTACCTGTAAAAG 59.936 40.741 22.22 3.79 38.14 2.27
944 1028 8.917088 TGTACTTAGTACCTGTAAAAGAGTTGT 58.083 33.333 18.49 0.00 38.14 3.32
948 1032 9.978044 CTTAGTACCTGTAAAAGAGTTGTAACT 57.022 33.333 0.00 0.00 43.16 2.24
983 1067 2.885861 GATCAGACGGTGAGCGGT 59.114 61.111 9.43 0.00 39.07 5.68
986 1070 2.227089 ATCAGACGGTGAGCGGTTCC 62.227 60.000 9.43 0.00 39.07 3.62
987 1071 3.692406 AGACGGTGAGCGGTTCCC 61.692 66.667 9.43 0.00 0.00 3.97
988 1072 3.692406 GACGGTGAGCGGTTCCCT 61.692 66.667 9.43 0.00 0.00 4.20
989 1073 3.644399 GACGGTGAGCGGTTCCCTC 62.644 68.421 9.43 0.00 0.00 4.30
990 1074 4.452733 CGGTGAGCGGTTCCCTCC 62.453 72.222 0.00 0.00 0.00 4.30
991 1075 4.097361 GGTGAGCGGTTCCCTCCC 62.097 72.222 0.00 3.65 0.00 4.30
992 1076 4.097361 GTGAGCGGTTCCCTCCCC 62.097 72.222 0.00 0.00 0.00 4.81
1580 1674 1.078848 AGTTCATGGAGCTCGTGGC 60.079 57.895 7.83 6.42 42.19 5.01
1723 1823 1.078001 ATCGGCCCGTTAAACCCAG 60.078 57.895 1.63 0.00 0.00 4.45
1845 1963 4.223477 TCGGTACTTTACCTATGCTTTGGT 59.777 41.667 10.40 10.40 46.81 3.67
2034 2152 3.023735 GGGAGGGGGCTGGTGATT 61.024 66.667 0.00 0.00 0.00 2.57
2292 2410 1.964223 GAGGTCATCAAGAGGGCGATA 59.036 52.381 0.00 0.00 0.00 2.92
2405 2523 0.179134 GACATGGAGGAGTTCGTCGG 60.179 60.000 0.00 0.00 0.00 4.79
2425 2543 0.874390 TCGCATCACAAAGTGAAGGC 59.126 50.000 13.69 13.69 45.96 4.35
2426 2544 0.592637 CGCATCACAAAGTGAAGGCA 59.407 50.000 19.80 0.00 45.96 4.75
2427 2545 1.400629 CGCATCACAAAGTGAAGGCAG 60.401 52.381 19.80 12.40 45.96 4.85
2445 2563 2.163412 GCAGGATTGGCGTCAATAAACA 59.837 45.455 16.53 0.00 43.08 2.83
2482 2612 0.720027 CAGCGTCAATCAGAGCAGTG 59.280 55.000 0.00 0.00 0.00 3.66
2537 2669 4.210537 ACGTTCGTAGATTTGTTTCCTGTG 59.789 41.667 0.00 0.00 35.04 3.66
2549 2681 3.188873 TGTTTCCTGTGTTTTTCGTTCGT 59.811 39.130 0.00 0.00 0.00 3.85
2560 2700 0.248825 TTCGTTCGTTCCGTTCGGAA 60.249 50.000 20.52 20.52 41.48 4.30
2566 2706 4.659480 TTCCGTTCGGAACTTCGG 57.341 55.556 20.52 14.27 39.15 4.30
2568 2708 1.286880 TCCGTTCGGAACTTCGGAC 59.713 57.895 17.94 0.00 45.49 4.79
2611 2751 2.044806 ATCCGTGGTCCTAGCATGCC 62.045 60.000 15.66 0.00 31.64 4.40
2710 3022 5.927954 ATGCATGCAAACTTTGGTTTAAG 57.072 34.783 26.68 0.00 42.96 1.85
2715 3027 7.090173 GCATGCAAACTTTGGTTTAAGAGATA 58.910 34.615 14.21 0.00 42.96 1.98
2760 3074 9.494271 AATATGTGTACAGCTCGAAATATTCAT 57.506 29.630 0.00 0.00 0.00 2.57
2895 3216 2.979813 GTCAAATGTTGCACGTTCCATC 59.020 45.455 0.00 0.00 0.00 3.51
2896 3217 2.620585 TCAAATGTTGCACGTTCCATCA 59.379 40.909 0.00 0.00 0.00 3.07
2947 3268 9.616156 TCTACTGGTTATTCTTTTGTGTTGTTA 57.384 29.630 0.00 0.00 0.00 2.41
2982 3305 4.952335 TGAGACTCATCAGAAGCATAGACA 59.048 41.667 0.00 0.00 0.00 3.41
3015 3338 3.059884 CACACGCTTTCATGTGTAGACT 58.940 45.455 0.00 0.00 46.97 3.24
3072 3395 5.064962 ACCAAACAAACTTCACATGCAATTG 59.935 36.000 0.00 0.00 0.00 2.32
3160 3543 4.096081 CAGGAGAGCAATTGGACATTTCTC 59.904 45.833 7.72 3.39 0.00 2.87
3174 3557 5.444663 ACATTTCTCTTCCAAGAACAAGC 57.555 39.130 0.00 0.00 35.06 4.01
3195 3578 3.300009 CAAATTGTTGCTGGTCGTTCTC 58.700 45.455 0.00 0.00 0.00 2.87
3212 3595 7.244192 GTCGTTCTCATTAGGATTGGAAAAAG 58.756 38.462 0.00 0.00 0.00 2.27
3334 3718 4.520846 CGATGGAAGCAACCGCGC 62.521 66.667 0.00 0.00 45.49 6.86
3343 3727 3.030652 CAACCGCGCCAAAAGAGT 58.969 55.556 0.00 0.00 0.00 3.24
3421 3805 5.980116 CCTACAATGATAAGTGGTCTCTTCG 59.020 44.000 0.00 0.00 0.00 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 6.368791 GCGCTTATGTTTGGTGATATCATAGA 59.631 38.462 9.02 0.00 0.00 1.98
4 5 5.994668 TGCGCTTATGTTTGGTGATATCATA 59.005 36.000 9.73 0.00 0.00 2.15
5 6 4.821260 TGCGCTTATGTTTGGTGATATCAT 59.179 37.500 9.73 0.00 0.00 2.45
6 7 4.195416 TGCGCTTATGTTTGGTGATATCA 58.805 39.130 9.73 0.00 0.00 2.15
9 10 5.378292 TTTTGCGCTTATGTTTGGTGATA 57.622 34.783 9.73 0.00 0.00 2.15
10 11 3.932545 TTTGCGCTTATGTTTGGTGAT 57.067 38.095 9.73 0.00 0.00 3.06
11 12 3.717400 TTTTGCGCTTATGTTTGGTGA 57.283 38.095 9.73 0.00 0.00 4.02
12 13 3.123284 CCATTTTGCGCTTATGTTTGGTG 59.877 43.478 9.73 0.00 0.00 4.17
13 14 3.006323 TCCATTTTGCGCTTATGTTTGGT 59.994 39.130 9.73 0.00 0.00 3.67
14 15 3.583806 TCCATTTTGCGCTTATGTTTGG 58.416 40.909 9.73 6.93 0.00 3.28
15 16 4.922692 TCTTCCATTTTGCGCTTATGTTTG 59.077 37.500 9.73 0.00 0.00 2.93
16 17 5.132897 TCTTCCATTTTGCGCTTATGTTT 57.867 34.783 9.73 0.00 0.00 2.83
17 18 4.782019 TCTTCCATTTTGCGCTTATGTT 57.218 36.364 9.73 0.00 0.00 2.71
18 19 4.989279 ATCTTCCATTTTGCGCTTATGT 57.011 36.364 9.73 0.00 0.00 2.29
19 20 6.075415 CGTAAATCTTCCATTTTGCGCTTATG 60.075 38.462 9.73 9.35 34.97 1.90
20 21 5.971202 CGTAAATCTTCCATTTTGCGCTTAT 59.029 36.000 9.73 0.00 34.97 1.73
21 22 5.328691 CGTAAATCTTCCATTTTGCGCTTA 58.671 37.500 9.73 0.00 34.97 3.09
22 23 4.165779 CGTAAATCTTCCATTTTGCGCTT 58.834 39.130 9.73 0.00 34.97 4.68
23 24 3.427503 CCGTAAATCTTCCATTTTGCGCT 60.428 43.478 9.73 0.00 38.87 5.92
24 25 2.851824 CCGTAAATCTTCCATTTTGCGC 59.148 45.455 0.00 0.00 38.87 6.09
25 26 4.091453 ACCGTAAATCTTCCATTTTGCG 57.909 40.909 0.00 0.00 39.57 4.85
26 27 5.054390 TGACCGTAAATCTTCCATTTTGC 57.946 39.130 0.00 0.00 0.00 3.68
27 28 5.567534 CGTTGACCGTAAATCTTCCATTTTG 59.432 40.000 0.00 0.00 0.00 2.44
28 29 5.470777 TCGTTGACCGTAAATCTTCCATTTT 59.529 36.000 0.00 0.00 37.94 1.82
29 30 4.998672 TCGTTGACCGTAAATCTTCCATTT 59.001 37.500 0.00 0.00 37.94 2.32
30 31 4.571919 TCGTTGACCGTAAATCTTCCATT 58.428 39.130 0.00 0.00 37.94 3.16
31 32 4.196626 TCGTTGACCGTAAATCTTCCAT 57.803 40.909 0.00 0.00 37.94 3.41
32 33 3.663995 TCGTTGACCGTAAATCTTCCA 57.336 42.857 0.00 0.00 37.94 3.53
33 34 4.450080 AGTTTCGTTGACCGTAAATCTTCC 59.550 41.667 0.00 0.00 37.94 3.46
34 35 5.587033 AGTTTCGTTGACCGTAAATCTTC 57.413 39.130 0.00 0.00 37.94 2.87
35 36 6.449698 TCTAGTTTCGTTGACCGTAAATCTT 58.550 36.000 0.00 0.00 37.94 2.40
36 37 6.017400 TCTAGTTTCGTTGACCGTAAATCT 57.983 37.500 0.00 0.00 37.94 2.40
37 38 6.364435 ACTTCTAGTTTCGTTGACCGTAAATC 59.636 38.462 0.00 0.00 37.94 2.17
38 39 6.218746 ACTTCTAGTTTCGTTGACCGTAAAT 58.781 36.000 0.00 0.00 37.94 1.40
39 40 5.591099 ACTTCTAGTTTCGTTGACCGTAAA 58.409 37.500 0.00 0.00 37.94 2.01
40 41 5.186996 ACTTCTAGTTTCGTTGACCGTAA 57.813 39.130 0.00 0.00 37.94 3.18
41 42 4.611355 CGACTTCTAGTTTCGTTGACCGTA 60.611 45.833 0.00 0.00 37.94 4.02
42 43 3.636381 GACTTCTAGTTTCGTTGACCGT 58.364 45.455 0.00 0.00 37.94 4.83
43 44 2.655474 CGACTTCTAGTTTCGTTGACCG 59.345 50.000 0.00 0.00 38.13 4.79
44 45 3.667726 GTCGACTTCTAGTTTCGTTGACC 59.332 47.826 8.70 0.00 35.66 4.02
45 46 3.667726 GGTCGACTTCTAGTTTCGTTGAC 59.332 47.826 16.46 10.60 39.13 3.18
46 47 3.607775 CGGTCGACTTCTAGTTTCGTTGA 60.608 47.826 16.46 1.66 34.35 3.18
47 48 2.655474 CGGTCGACTTCTAGTTTCGTTG 59.345 50.000 16.46 0.00 34.35 4.10
48 49 2.919807 GCGGTCGACTTCTAGTTTCGTT 60.920 50.000 16.46 0.00 34.35 3.85
49 50 1.400759 GCGGTCGACTTCTAGTTTCGT 60.401 52.381 16.46 0.00 34.35 3.85
50 51 1.257539 GCGGTCGACTTCTAGTTTCG 58.742 55.000 16.46 8.06 0.00 3.46
51 52 1.984297 GTGCGGTCGACTTCTAGTTTC 59.016 52.381 16.46 0.00 0.00 2.78
52 53 1.665161 CGTGCGGTCGACTTCTAGTTT 60.665 52.381 16.46 0.00 0.00 2.66
53 54 0.109873 CGTGCGGTCGACTTCTAGTT 60.110 55.000 16.46 0.00 0.00 2.24
54 55 1.500844 CGTGCGGTCGACTTCTAGT 59.499 57.895 16.46 0.00 0.00 2.57
55 56 1.226323 CCGTGCGGTCGACTTCTAG 60.226 63.158 16.46 4.82 0.00 2.43
56 57 1.028330 ATCCGTGCGGTCGACTTCTA 61.028 55.000 16.46 0.00 36.47 2.10
57 58 1.028330 TATCCGTGCGGTCGACTTCT 61.028 55.000 16.46 0.00 36.47 2.85
58 59 0.179156 TTATCCGTGCGGTCGACTTC 60.179 55.000 16.46 8.02 36.47 3.01
59 60 0.244450 TTTATCCGTGCGGTCGACTT 59.756 50.000 16.46 0.00 36.47 3.01
60 61 0.179145 CTTTATCCGTGCGGTCGACT 60.179 55.000 16.46 0.00 36.47 4.18
61 62 0.457337 ACTTTATCCGTGCGGTCGAC 60.457 55.000 7.13 7.13 36.47 4.20
62 63 0.179156 GACTTTATCCGTGCGGTCGA 60.179 55.000 10.60 0.00 36.47 4.20
63 64 0.457166 TGACTTTATCCGTGCGGTCG 60.457 55.000 10.60 0.00 36.47 4.79
64 65 0.997196 GTGACTTTATCCGTGCGGTC 59.003 55.000 10.60 0.45 36.47 4.79
65 66 0.390735 GGTGACTTTATCCGTGCGGT 60.391 55.000 10.60 1.20 36.47 5.68
66 67 0.390603 TGGTGACTTTATCCGTGCGG 60.391 55.000 3.94 3.94 0.00 5.69
67 68 0.719465 GTGGTGACTTTATCCGTGCG 59.281 55.000 0.00 0.00 0.00 5.34
68 69 1.803334 TGTGGTGACTTTATCCGTGC 58.197 50.000 0.00 0.00 0.00 5.34
69 70 2.603110 CGATGTGGTGACTTTATCCGTG 59.397 50.000 0.00 0.00 0.00 4.94
70 71 2.494471 TCGATGTGGTGACTTTATCCGT 59.506 45.455 0.00 0.00 0.00 4.69
71 72 3.159353 TCGATGTGGTGACTTTATCCG 57.841 47.619 0.00 0.00 0.00 4.18
72 73 4.442706 ACATCGATGTGGTGACTTTATCC 58.557 43.478 29.49 0.00 40.03 2.59
102 103 9.869757 TCGATTTGAGATCAACTCTATACAAAA 57.130 29.630 10.14 0.00 45.13 2.44
103 104 9.869757 TTCGATTTGAGATCAACTCTATACAAA 57.130 29.630 10.14 0.00 45.13 2.83
104 105 9.521503 CTTCGATTTGAGATCAACTCTATACAA 57.478 33.333 10.14 0.00 45.13 2.41
105 106 7.649705 GCTTCGATTTGAGATCAACTCTATACA 59.350 37.037 10.14 0.00 45.13 2.29
106 107 7.649705 TGCTTCGATTTGAGATCAACTCTATAC 59.350 37.037 10.14 1.04 45.13 1.47
107 108 7.716612 TGCTTCGATTTGAGATCAACTCTATA 58.283 34.615 10.14 0.00 45.13 1.31
108 109 6.577103 TGCTTCGATTTGAGATCAACTCTAT 58.423 36.000 10.14 0.00 45.13 1.98
109 110 5.965922 TGCTTCGATTTGAGATCAACTCTA 58.034 37.500 10.14 0.00 45.13 2.43
110 111 4.825422 TGCTTCGATTTGAGATCAACTCT 58.175 39.130 10.14 0.00 45.13 3.24
111 112 5.731599 ATGCTTCGATTTGAGATCAACTC 57.268 39.130 0.00 0.00 45.11 3.01
112 113 7.798596 ATAATGCTTCGATTTGAGATCAACT 57.201 32.000 0.00 0.00 35.28 3.16
113 114 7.912250 ACAATAATGCTTCGATTTGAGATCAAC 59.088 33.333 0.00 0.00 35.28 3.18
114 115 7.988737 ACAATAATGCTTCGATTTGAGATCAA 58.011 30.769 0.00 0.00 0.00 2.57
115 116 7.558161 ACAATAATGCTTCGATTTGAGATCA 57.442 32.000 0.00 0.00 0.00 2.92
116 117 8.847444 AAACAATAATGCTTCGATTTGAGATC 57.153 30.769 0.00 0.00 0.00 2.75
154 155 8.861086 TCGCCTACTTAATCTTCTTCATCTAAT 58.139 33.333 0.00 0.00 0.00 1.73
155 156 8.234136 TCGCCTACTTAATCTTCTTCATCTAA 57.766 34.615 0.00 0.00 0.00 2.10
156 157 7.522399 GCTCGCCTACTTAATCTTCTTCATCTA 60.522 40.741 0.00 0.00 0.00 1.98
157 158 6.716934 TCGCCTACTTAATCTTCTTCATCT 57.283 37.500 0.00 0.00 0.00 2.90
158 159 5.404066 GCTCGCCTACTTAATCTTCTTCATC 59.596 44.000 0.00 0.00 0.00 2.92
159 160 5.163405 TGCTCGCCTACTTAATCTTCTTCAT 60.163 40.000 0.00 0.00 0.00 2.57
160 161 4.159693 TGCTCGCCTACTTAATCTTCTTCA 59.840 41.667 0.00 0.00 0.00 3.02
161 162 4.504826 GTGCTCGCCTACTTAATCTTCTTC 59.495 45.833 0.00 0.00 0.00 2.87
162 163 4.081642 TGTGCTCGCCTACTTAATCTTCTT 60.082 41.667 0.00 0.00 0.00 2.52
163 164 3.447586 TGTGCTCGCCTACTTAATCTTCT 59.552 43.478 0.00 0.00 0.00 2.85
164 165 3.782046 TGTGCTCGCCTACTTAATCTTC 58.218 45.455 0.00 0.00 0.00 2.87
165 166 3.887621 TGTGCTCGCCTACTTAATCTT 57.112 42.857 0.00 0.00 0.00 2.40
166 167 3.056107 TGTTGTGCTCGCCTACTTAATCT 60.056 43.478 0.00 0.00 0.00 2.40
167 168 3.062234 GTGTTGTGCTCGCCTACTTAATC 59.938 47.826 0.00 0.00 0.00 1.75
168 169 3.000727 GTGTTGTGCTCGCCTACTTAAT 58.999 45.455 0.00 0.00 0.00 1.40
169 170 2.224090 TGTGTTGTGCTCGCCTACTTAA 60.224 45.455 0.00 0.00 0.00 1.85
170 171 1.341852 TGTGTTGTGCTCGCCTACTTA 59.658 47.619 0.00 0.00 0.00 2.24
171 172 0.105964 TGTGTTGTGCTCGCCTACTT 59.894 50.000 0.00 0.00 0.00 2.24
172 173 0.105964 TTGTGTTGTGCTCGCCTACT 59.894 50.000 0.00 0.00 0.00 2.57
173 174 0.512952 CTTGTGTTGTGCTCGCCTAC 59.487 55.000 0.00 0.00 0.00 3.18
174 175 0.602638 CCTTGTGTTGTGCTCGCCTA 60.603 55.000 0.00 0.00 0.00 3.93
175 176 1.893808 CCTTGTGTTGTGCTCGCCT 60.894 57.895 0.00 0.00 0.00 5.52
176 177 1.444119 TTCCTTGTGTTGTGCTCGCC 61.444 55.000 0.00 0.00 0.00 5.54
177 178 0.380378 TTTCCTTGTGTTGTGCTCGC 59.620 50.000 0.00 0.00 0.00 5.03
178 179 2.842208 TTTTCCTTGTGTTGTGCTCG 57.158 45.000 0.00 0.00 0.00 5.03
179 180 6.681777 AGATATTTTTCCTTGTGTTGTGCTC 58.318 36.000 0.00 0.00 0.00 4.26
180 181 6.655078 AGATATTTTTCCTTGTGTTGTGCT 57.345 33.333 0.00 0.00 0.00 4.40
181 182 7.538678 CACTAGATATTTTTCCTTGTGTTGTGC 59.461 37.037 0.00 0.00 32.04 4.57
182 183 7.538678 GCACTAGATATTTTTCCTTGTGTTGTG 59.461 37.037 0.00 0.00 36.52 3.33
183 184 7.448469 AGCACTAGATATTTTTCCTTGTGTTGT 59.552 33.333 0.00 0.00 36.52 3.32
184 185 7.820648 AGCACTAGATATTTTTCCTTGTGTTG 58.179 34.615 0.00 0.00 36.52 3.33
185 186 8.947115 GTAGCACTAGATATTTTTCCTTGTGTT 58.053 33.333 0.00 0.00 36.52 3.32
186 187 7.553044 GGTAGCACTAGATATTTTTCCTTGTGT 59.447 37.037 0.00 0.00 36.52 3.72
187 188 7.552687 TGGTAGCACTAGATATTTTTCCTTGTG 59.447 37.037 0.00 0.00 36.96 3.33
188 189 7.630082 TGGTAGCACTAGATATTTTTCCTTGT 58.370 34.615 0.00 0.00 0.00 3.16
189 190 8.506168 TTGGTAGCACTAGATATTTTTCCTTG 57.494 34.615 0.00 0.00 0.00 3.61
190 191 8.329502 ACTTGGTAGCACTAGATATTTTTCCTT 58.670 33.333 0.00 0.00 0.00 3.36
191 192 7.862675 ACTTGGTAGCACTAGATATTTTTCCT 58.137 34.615 0.00 0.00 0.00 3.36
192 193 8.507524 AACTTGGTAGCACTAGATATTTTTCC 57.492 34.615 0.00 0.00 0.00 3.13
196 197 9.614792 CCTAAAACTTGGTAGCACTAGATATTT 57.385 33.333 0.00 0.00 0.00 1.40
197 198 8.769359 ACCTAAAACTTGGTAGCACTAGATATT 58.231 33.333 0.00 0.00 34.36 1.28
198 199 8.204836 CACCTAAAACTTGGTAGCACTAGATAT 58.795 37.037 0.00 0.00 34.79 1.63
199 200 7.553334 CACCTAAAACTTGGTAGCACTAGATA 58.447 38.462 0.00 0.00 34.79 1.98
200 201 6.407202 CACCTAAAACTTGGTAGCACTAGAT 58.593 40.000 0.00 0.00 34.79 1.98
201 202 5.790593 CACCTAAAACTTGGTAGCACTAGA 58.209 41.667 0.00 0.00 34.79 2.43
202 203 4.392138 GCACCTAAAACTTGGTAGCACTAG 59.608 45.833 0.00 0.00 34.79 2.57
203 204 4.041198 AGCACCTAAAACTTGGTAGCACTA 59.959 41.667 0.00 0.00 34.88 2.74
204 205 3.146847 GCACCTAAAACTTGGTAGCACT 58.853 45.455 0.00 0.00 34.79 4.40
205 206 3.146847 AGCACCTAAAACTTGGTAGCAC 58.853 45.455 0.00 0.00 34.88 4.40
206 207 3.502123 AGCACCTAAAACTTGGTAGCA 57.498 42.857 0.00 0.00 34.88 3.49
207 208 3.688185 GGTAGCACCTAAAACTTGGTAGC 59.312 47.826 0.00 0.00 34.73 3.58
208 209 4.901868 TGGTAGCACCTAAAACTTGGTAG 58.098 43.478 6.83 0.00 39.58 3.18
209 210 4.978438 TGGTAGCACCTAAAACTTGGTA 57.022 40.909 6.83 0.00 39.58 3.25
210 211 3.868619 TGGTAGCACCTAAAACTTGGT 57.131 42.857 6.83 0.00 39.58 3.67
211 212 4.331968 TCATGGTAGCACCTAAAACTTGG 58.668 43.478 0.00 0.00 39.58 3.61
212 213 6.597672 TGTATCATGGTAGCACCTAAAACTTG 59.402 38.462 0.00 0.00 39.58 3.16
213 214 6.717289 TGTATCATGGTAGCACCTAAAACTT 58.283 36.000 0.00 0.00 39.58 2.66
214 215 6.308015 TGTATCATGGTAGCACCTAAAACT 57.692 37.500 0.00 0.00 39.58 2.66
215 216 6.458342 GCTTGTATCATGGTAGCACCTAAAAC 60.458 42.308 0.00 0.00 39.58 2.43
216 217 5.588648 GCTTGTATCATGGTAGCACCTAAAA 59.411 40.000 0.00 0.00 39.58 1.52
217 218 5.123227 GCTTGTATCATGGTAGCACCTAAA 58.877 41.667 0.00 0.00 39.58 1.85
218 219 4.163268 TGCTTGTATCATGGTAGCACCTAA 59.837 41.667 0.00 0.00 39.58 2.69
219 220 3.709141 TGCTTGTATCATGGTAGCACCTA 59.291 43.478 0.00 0.00 39.58 3.08
220 221 2.505407 TGCTTGTATCATGGTAGCACCT 59.495 45.455 0.00 0.00 39.58 4.00
221 222 2.917933 TGCTTGTATCATGGTAGCACC 58.082 47.619 0.00 0.00 36.96 5.01
222 223 4.384056 AGATGCTTGTATCATGGTAGCAC 58.616 43.478 4.04 0.17 43.78 4.40
223 224 4.635223 GAGATGCTTGTATCATGGTAGCA 58.365 43.478 4.43 4.43 44.91 3.49
224 225 3.677121 CGAGATGCTTGTATCATGGTAGC 59.323 47.826 0.00 0.00 0.00 3.58
225 226 4.240888 CCGAGATGCTTGTATCATGGTAG 58.759 47.826 0.00 0.00 0.00 3.18
226 227 3.554960 GCCGAGATGCTTGTATCATGGTA 60.555 47.826 0.00 0.00 0.00 3.25
227 228 2.808202 GCCGAGATGCTTGTATCATGGT 60.808 50.000 0.00 0.00 0.00 3.55
228 229 1.802960 GCCGAGATGCTTGTATCATGG 59.197 52.381 0.00 3.89 0.00 3.66
229 230 1.802960 GGCCGAGATGCTTGTATCATG 59.197 52.381 0.00 0.00 0.00 3.07
230 231 1.606480 CGGCCGAGATGCTTGTATCAT 60.606 52.381 24.07 0.00 0.00 2.45
231 232 0.249447 CGGCCGAGATGCTTGTATCA 60.249 55.000 24.07 0.00 0.00 2.15
232 233 0.249489 ACGGCCGAGATGCTTGTATC 60.249 55.000 35.90 0.00 0.00 2.24
233 234 0.178068 AACGGCCGAGATGCTTGTAT 59.822 50.000 35.90 0.00 0.00 2.29
234 235 0.739462 CAACGGCCGAGATGCTTGTA 60.739 55.000 35.90 0.00 0.00 2.41
235 236 2.034879 CAACGGCCGAGATGCTTGT 61.035 57.895 35.90 1.64 0.00 3.16
236 237 2.753966 CCAACGGCCGAGATGCTTG 61.754 63.158 35.90 23.63 0.00 4.01
237 238 2.257409 ATCCAACGGCCGAGATGCTT 62.257 55.000 35.90 12.08 0.00 3.91
238 239 2.257409 AATCCAACGGCCGAGATGCT 62.257 55.000 35.90 13.34 0.00 3.79
239 240 1.776034 GAATCCAACGGCCGAGATGC 61.776 60.000 35.90 23.82 0.00 3.91
240 241 0.179073 AGAATCCAACGGCCGAGATG 60.179 55.000 35.90 25.43 0.00 2.90
241 242 0.105039 GAGAATCCAACGGCCGAGAT 59.895 55.000 35.90 25.88 0.00 2.75
242 243 1.254975 TGAGAATCCAACGGCCGAGA 61.255 55.000 35.90 24.79 0.00 4.04
243 244 0.807667 CTGAGAATCCAACGGCCGAG 60.808 60.000 35.90 23.30 0.00 4.63
244 245 1.218047 CTGAGAATCCAACGGCCGA 59.782 57.895 35.90 10.13 0.00 5.54
245 246 0.179073 ATCTGAGAATCCAACGGCCG 60.179 55.000 26.86 26.86 0.00 6.13
246 247 1.139853 AGATCTGAGAATCCAACGGCC 59.860 52.381 0.00 0.00 0.00 6.13
247 248 2.159043 TCAGATCTGAGAATCCAACGGC 60.159 50.000 21.67 0.00 34.14 5.68
248 249 3.808466 TCAGATCTGAGAATCCAACGG 57.192 47.619 21.67 0.00 34.14 4.44
249 250 4.056740 CCATCAGATCTGAGAATCCAACG 58.943 47.826 28.26 9.40 43.61 4.10
250 251 3.814283 GCCATCAGATCTGAGAATCCAAC 59.186 47.826 28.26 9.77 43.61 3.77
251 252 3.715315 AGCCATCAGATCTGAGAATCCAA 59.285 43.478 28.26 5.29 43.61 3.53
252 253 3.315596 AGCCATCAGATCTGAGAATCCA 58.684 45.455 28.26 6.04 43.61 3.41
253 254 3.579586 AGAGCCATCAGATCTGAGAATCC 59.420 47.826 28.26 17.25 43.61 3.01
254 255 4.281435 TGAGAGCCATCAGATCTGAGAATC 59.719 45.833 28.26 21.48 43.61 2.52
255 256 4.224762 TGAGAGCCATCAGATCTGAGAAT 58.775 43.478 28.26 15.24 43.61 2.40
256 257 3.639952 TGAGAGCCATCAGATCTGAGAA 58.360 45.455 28.26 8.28 43.61 2.87
257 258 3.309600 TGAGAGCCATCAGATCTGAGA 57.690 47.619 28.26 9.04 43.61 3.27
258 259 4.610605 ATTGAGAGCCATCAGATCTGAG 57.389 45.455 28.26 17.73 43.61 3.35
259 260 5.601729 AGTTATTGAGAGCCATCAGATCTGA 59.398 40.000 27.03 27.03 44.59 3.27
260 261 5.856156 AGTTATTGAGAGCCATCAGATCTG 58.144 41.667 17.07 17.07 0.00 2.90
261 262 5.840149 AGAGTTATTGAGAGCCATCAGATCT 59.160 40.000 0.00 0.00 0.00 2.75
262 263 5.927689 CAGAGTTATTGAGAGCCATCAGATC 59.072 44.000 0.00 0.00 0.00 2.75
263 264 5.742546 GCAGAGTTATTGAGAGCCATCAGAT 60.743 44.000 0.00 0.00 0.00 2.90
264 265 4.442612 GCAGAGTTATTGAGAGCCATCAGA 60.443 45.833 0.00 0.00 0.00 3.27
265 266 3.808726 GCAGAGTTATTGAGAGCCATCAG 59.191 47.826 0.00 0.00 0.00 2.90
266 267 3.198417 TGCAGAGTTATTGAGAGCCATCA 59.802 43.478 0.00 0.00 0.00 3.07
267 268 3.801698 TGCAGAGTTATTGAGAGCCATC 58.198 45.455 0.00 0.00 0.00 3.51
268 269 3.920231 TGCAGAGTTATTGAGAGCCAT 57.080 42.857 0.00 0.00 0.00 4.40
269 270 3.701205 TTGCAGAGTTATTGAGAGCCA 57.299 42.857 0.00 0.00 0.00 4.75
270 271 6.874288 AATATTGCAGAGTTATTGAGAGCC 57.126 37.500 0.00 0.00 0.00 4.70
287 288 6.307800 CCTCGTAGGTGTTTTTGCAAATATTG 59.692 38.462 13.65 0.00 0.00 1.90
288 289 6.207810 TCCTCGTAGGTGTTTTTGCAAATATT 59.792 34.615 13.65 0.00 36.53 1.28
289 290 5.708230 TCCTCGTAGGTGTTTTTGCAAATAT 59.292 36.000 13.65 0.00 36.53 1.28
290 291 5.064558 TCCTCGTAGGTGTTTTTGCAAATA 58.935 37.500 13.65 5.33 36.53 1.40
291 292 3.886505 TCCTCGTAGGTGTTTTTGCAAAT 59.113 39.130 13.65 0.00 36.53 2.32
292 293 3.280295 TCCTCGTAGGTGTTTTTGCAAA 58.720 40.909 8.05 8.05 36.53 3.68
293 294 2.875933 CTCCTCGTAGGTGTTTTTGCAA 59.124 45.455 0.00 0.00 36.53 4.08
294 295 2.158871 ACTCCTCGTAGGTGTTTTTGCA 60.159 45.455 3.69 0.00 38.85 4.08
295 296 2.479275 GACTCCTCGTAGGTGTTTTTGC 59.521 50.000 9.10 0.00 41.72 3.68
296 297 3.064931 GGACTCCTCGTAGGTGTTTTTG 58.935 50.000 9.10 0.00 41.72 2.44
297 298 2.701951 TGGACTCCTCGTAGGTGTTTTT 59.298 45.455 9.10 0.00 41.72 1.94
298 299 2.322658 TGGACTCCTCGTAGGTGTTTT 58.677 47.619 9.10 0.00 41.72 2.43
299 300 2.005370 TGGACTCCTCGTAGGTGTTT 57.995 50.000 9.10 0.00 41.72 2.83
300 301 2.005370 TTGGACTCCTCGTAGGTGTT 57.995 50.000 9.10 0.00 41.72 3.32
301 302 2.005370 TTTGGACTCCTCGTAGGTGT 57.995 50.000 7.91 7.91 44.09 4.16
302 303 3.396260 TTTTTGGACTCCTCGTAGGTG 57.604 47.619 0.00 2.16 36.53 4.00
303 304 4.202430 ACAATTTTTGGACTCCTCGTAGGT 60.202 41.667 0.00 0.00 33.80 3.08
304 305 4.154195 CACAATTTTTGGACTCCTCGTAGG 59.846 45.833 0.00 0.00 33.51 3.18
305 306 4.378459 GCACAATTTTTGGACTCCTCGTAG 60.378 45.833 0.00 0.00 34.12 3.51
306 307 3.500680 GCACAATTTTTGGACTCCTCGTA 59.499 43.478 0.00 0.00 34.12 3.43
307 308 2.293399 GCACAATTTTTGGACTCCTCGT 59.707 45.455 0.00 0.00 34.12 4.18
308 309 2.293122 TGCACAATTTTTGGACTCCTCG 59.707 45.455 0.00 0.00 34.12 4.63
309 310 4.022068 TGATGCACAATTTTTGGACTCCTC 60.022 41.667 0.00 0.00 34.12 3.71
310 311 3.896888 TGATGCACAATTTTTGGACTCCT 59.103 39.130 0.00 0.00 34.12 3.69
311 312 4.240096 CTGATGCACAATTTTTGGACTCC 58.760 43.478 0.00 0.00 34.12 3.85
312 313 4.874970 ACTGATGCACAATTTTTGGACTC 58.125 39.130 0.00 0.00 34.12 3.36
313 314 4.262164 GGACTGATGCACAATTTTTGGACT 60.262 41.667 0.00 0.00 34.12 3.85
314 315 3.989817 GGACTGATGCACAATTTTTGGAC 59.010 43.478 0.00 0.00 34.12 4.02
315 316 3.640498 TGGACTGATGCACAATTTTTGGA 59.360 39.130 0.00 0.00 34.12 3.53
316 317 3.991773 CTGGACTGATGCACAATTTTTGG 59.008 43.478 0.00 0.00 34.12 3.28
317 318 3.430895 GCTGGACTGATGCACAATTTTTG 59.569 43.478 0.00 0.00 0.00 2.44
318 319 3.069872 TGCTGGACTGATGCACAATTTTT 59.930 39.130 0.00 0.00 0.00 1.94
319 320 2.629137 TGCTGGACTGATGCACAATTTT 59.371 40.909 0.00 0.00 0.00 1.82
320 321 2.230508 CTGCTGGACTGATGCACAATTT 59.769 45.455 0.00 0.00 32.91 1.82
321 322 1.816835 CTGCTGGACTGATGCACAATT 59.183 47.619 0.00 0.00 32.91 2.32
322 323 1.003928 TCTGCTGGACTGATGCACAAT 59.996 47.619 0.00 0.00 32.91 2.71
323 324 0.397564 TCTGCTGGACTGATGCACAA 59.602 50.000 0.00 0.00 32.91 3.33
324 325 0.616891 ATCTGCTGGACTGATGCACA 59.383 50.000 0.00 0.00 35.77 4.57
325 326 1.669779 GAATCTGCTGGACTGATGCAC 59.330 52.381 0.00 0.00 37.07 4.57
326 327 1.279846 TGAATCTGCTGGACTGATGCA 59.720 47.619 0.00 0.00 39.34 3.96
327 328 2.034104 TGAATCTGCTGGACTGATGC 57.966 50.000 0.00 0.00 37.07 3.91
328 329 3.340928 TGTTGAATCTGCTGGACTGATG 58.659 45.455 0.00 0.00 37.07 3.07
329 330 3.708403 TGTTGAATCTGCTGGACTGAT 57.292 42.857 0.00 0.00 38.49 2.90
330 331 3.141398 GTTGTTGAATCTGCTGGACTGA 58.859 45.455 0.00 0.00 0.00 3.41
331 332 3.144506 AGTTGTTGAATCTGCTGGACTG 58.855 45.455 0.00 0.00 0.00 3.51
332 333 3.406764 GAGTTGTTGAATCTGCTGGACT 58.593 45.455 0.00 0.00 0.00 3.85
333 334 2.485814 GGAGTTGTTGAATCTGCTGGAC 59.514 50.000 0.00 0.00 0.00 4.02
334 335 2.553028 GGGAGTTGTTGAATCTGCTGGA 60.553 50.000 0.00 0.00 0.00 3.86
335 336 1.815003 GGGAGTTGTTGAATCTGCTGG 59.185 52.381 0.00 0.00 0.00 4.85
336 337 1.466167 CGGGAGTTGTTGAATCTGCTG 59.534 52.381 0.00 0.00 0.00 4.41
337 338 1.611673 CCGGGAGTTGTTGAATCTGCT 60.612 52.381 0.00 0.00 0.00 4.24
338 339 0.804989 CCGGGAGTTGTTGAATCTGC 59.195 55.000 0.00 0.00 0.00 4.26
339 340 2.472695 TCCGGGAGTTGTTGAATCTG 57.527 50.000 0.00 0.00 0.00 2.90
340 341 2.941415 GCATCCGGGAGTTGTTGAATCT 60.941 50.000 0.00 0.00 0.00 2.40
341 342 1.401905 GCATCCGGGAGTTGTTGAATC 59.598 52.381 0.00 0.00 0.00 2.52
342 343 1.463674 GCATCCGGGAGTTGTTGAAT 58.536 50.000 0.00 0.00 0.00 2.57
343 344 0.608035 GGCATCCGGGAGTTGTTGAA 60.608 55.000 0.00 0.00 0.00 2.69
344 345 1.002624 GGCATCCGGGAGTTGTTGA 60.003 57.895 0.00 0.00 0.00 3.18
345 346 2.398554 CGGCATCCGGGAGTTGTTG 61.399 63.158 0.00 0.00 44.15 3.33
346 347 2.046314 CGGCATCCGGGAGTTGTT 60.046 61.111 0.00 0.00 44.15 2.83
357 358 3.748568 GGATTCTTAGATTGGACGGCATC 59.251 47.826 0.00 0.00 0.00 3.91
358 359 3.744660 GGATTCTTAGATTGGACGGCAT 58.255 45.455 0.00 0.00 0.00 4.40
359 360 2.483013 CGGATTCTTAGATTGGACGGCA 60.483 50.000 0.00 0.00 0.00 5.69
360 361 2.135933 CGGATTCTTAGATTGGACGGC 58.864 52.381 0.00 0.00 0.00 5.68
361 362 3.381949 GTCGGATTCTTAGATTGGACGG 58.618 50.000 0.00 0.00 0.00 4.79
362 363 3.043586 CGTCGGATTCTTAGATTGGACG 58.956 50.000 9.76 9.76 39.76 4.79
363 364 3.381949 CCGTCGGATTCTTAGATTGGAC 58.618 50.000 4.91 0.00 0.00 4.02
364 365 2.223971 GCCGTCGGATTCTTAGATTGGA 60.224 50.000 17.49 0.00 0.00 3.53
365 366 2.135933 GCCGTCGGATTCTTAGATTGG 58.864 52.381 17.49 0.00 0.00 3.16
366 367 2.135933 GGCCGTCGGATTCTTAGATTG 58.864 52.381 17.49 0.00 0.00 2.67
367 368 1.070289 GGGCCGTCGGATTCTTAGATT 59.930 52.381 17.49 0.00 0.00 2.40
368 369 0.680061 GGGCCGTCGGATTCTTAGAT 59.320 55.000 17.49 0.00 0.00 1.98
369 370 0.685131 TGGGCCGTCGGATTCTTAGA 60.685 55.000 17.49 0.00 0.00 2.10
370 371 0.249489 CTGGGCCGTCGGATTCTTAG 60.249 60.000 17.49 0.00 0.00 2.18
371 372 0.685131 TCTGGGCCGTCGGATTCTTA 60.685 55.000 17.49 0.00 0.00 2.10
372 373 1.338136 ATCTGGGCCGTCGGATTCTT 61.338 55.000 17.49 0.00 29.01 2.52
373 374 1.762460 ATCTGGGCCGTCGGATTCT 60.762 57.895 17.49 0.00 29.01 2.40
374 375 1.595382 CATCTGGGCCGTCGGATTC 60.595 63.158 17.49 3.64 30.88 2.52
375 376 2.505982 CATCTGGGCCGTCGGATT 59.494 61.111 17.49 0.00 30.88 3.01
376 377 4.241555 GCATCTGGGCCGTCGGAT 62.242 66.667 17.49 0.00 33.34 4.18
384 385 0.957395 CGTGATATGGGCATCTGGGC 60.957 60.000 0.00 0.00 42.44 5.36
385 386 0.321919 CCGTGATATGGGCATCTGGG 60.322 60.000 0.00 0.00 0.00 4.45
386 387 0.397941 ACCGTGATATGGGCATCTGG 59.602 55.000 0.00 0.00 0.00 3.86
387 388 2.300152 ACTACCGTGATATGGGCATCTG 59.700 50.000 0.00 0.00 0.00 2.90
388 389 2.609747 ACTACCGTGATATGGGCATCT 58.390 47.619 0.00 0.00 0.00 2.90
389 390 4.737855 ATACTACCGTGATATGGGCATC 57.262 45.455 0.00 0.00 0.00 3.91
390 391 5.499004 AAATACTACCGTGATATGGGCAT 57.501 39.130 0.00 0.00 0.00 4.40
391 392 4.967084 AAATACTACCGTGATATGGGCA 57.033 40.909 0.00 0.00 0.00 5.36
392 393 5.350640 GCTTAAATACTACCGTGATATGGGC 59.649 44.000 0.00 0.00 0.00 5.36
393 394 5.873164 GGCTTAAATACTACCGTGATATGGG 59.127 44.000 0.00 0.00 0.00 4.00
394 395 6.698380 AGGCTTAAATACTACCGTGATATGG 58.302 40.000 0.00 0.00 0.00 2.74
395 396 6.527023 CGAGGCTTAAATACTACCGTGATATG 59.473 42.308 0.00 0.00 0.00 1.78
396 397 6.349944 CCGAGGCTTAAATACTACCGTGATAT 60.350 42.308 0.00 0.00 0.00 1.63
397 398 5.048504 CCGAGGCTTAAATACTACCGTGATA 60.049 44.000 0.00 0.00 0.00 2.15
398 399 4.261909 CCGAGGCTTAAATACTACCGTGAT 60.262 45.833 0.00 0.00 0.00 3.06
399 400 3.067180 CCGAGGCTTAAATACTACCGTGA 59.933 47.826 0.00 0.00 0.00 4.35
400 401 3.181483 ACCGAGGCTTAAATACTACCGTG 60.181 47.826 0.00 0.00 0.00 4.94
401 402 3.026694 ACCGAGGCTTAAATACTACCGT 58.973 45.455 0.00 0.00 0.00 4.83
402 403 3.722728 ACCGAGGCTTAAATACTACCG 57.277 47.619 0.00 0.00 0.00 4.02
403 404 4.038402 TGCTACCGAGGCTTAAATACTACC 59.962 45.833 0.00 0.00 0.00 3.18
404 405 4.981054 GTGCTACCGAGGCTTAAATACTAC 59.019 45.833 0.00 0.00 0.00 2.73
405 406 4.038402 GGTGCTACCGAGGCTTAAATACTA 59.962 45.833 0.00 0.00 0.00 1.82
406 407 3.181468 GGTGCTACCGAGGCTTAAATACT 60.181 47.826 0.00 0.00 0.00 2.12
407 408 3.129109 GGTGCTACCGAGGCTTAAATAC 58.871 50.000 0.00 0.00 0.00 1.89
408 409 3.464111 GGTGCTACCGAGGCTTAAATA 57.536 47.619 0.00 0.00 0.00 1.40
409 410 2.327200 GGTGCTACCGAGGCTTAAAT 57.673 50.000 0.00 0.00 0.00 1.40
410 411 3.846955 GGTGCTACCGAGGCTTAAA 57.153 52.632 0.00 0.00 0.00 1.52
420 421 0.960286 GGAGAGTATCCGGTGCTACC 59.040 60.000 0.00 2.28 38.67 3.18
430 431 3.600388 CTTGTGTTGTGGGGAGAGTATC 58.400 50.000 0.00 0.00 0.00 2.24
431 432 2.290323 GCTTGTGTTGTGGGGAGAGTAT 60.290 50.000 0.00 0.00 0.00 2.12
432 433 1.071699 GCTTGTGTTGTGGGGAGAGTA 59.928 52.381 0.00 0.00 0.00 2.59
433 434 0.179018 GCTTGTGTTGTGGGGAGAGT 60.179 55.000 0.00 0.00 0.00 3.24
434 435 0.179020 TGCTTGTGTTGTGGGGAGAG 60.179 55.000 0.00 0.00 0.00 3.20
435 436 0.465460 GTGCTTGTGTTGTGGGGAGA 60.465 55.000 0.00 0.00 0.00 3.71
436 437 1.785041 CGTGCTTGTGTTGTGGGGAG 61.785 60.000 0.00 0.00 0.00 4.30
437 438 1.821759 CGTGCTTGTGTTGTGGGGA 60.822 57.895 0.00 0.00 0.00 4.81
438 439 2.118404 ACGTGCTTGTGTTGTGGGG 61.118 57.895 0.00 0.00 0.00 4.96
439 440 1.063972 CACGTGCTTGTGTTGTGGG 59.936 57.895 0.82 0.00 35.12 4.61
440 441 1.586042 GCACGTGCTTGTGTTGTGG 60.586 57.895 32.55 0.00 41.94 4.17
473 478 1.208052 TGCATCTTAGTGGCTCTGACC 59.792 52.381 0.00 0.00 0.00 4.02
485 490 4.778213 AAGCTCCACCTAATGCATCTTA 57.222 40.909 0.00 0.00 0.00 2.10
523 528 1.749634 ACCGTTTCTATCGAGTCAGGG 59.250 52.381 0.00 0.00 0.00 4.45
559 569 5.988310 TCTTCAATCATCATGCCTTTTGT 57.012 34.783 0.00 0.00 0.00 2.83
578 588 8.748412 TGCATATAAACCTTGTTAAAGCATCTT 58.252 29.630 0.00 0.00 31.51 2.40
659 674 0.605083 AAAAGTACGGGTCCCTCGAC 59.395 55.000 6.29 0.86 38.38 4.20
661 676 0.893447 AGAAAAGTACGGGTCCCTCG 59.107 55.000 6.29 0.00 0.00 4.63
671 686 2.104859 GGCGCCGGGAGAAAAGTAC 61.105 63.158 12.58 0.00 0.00 2.73
733 750 4.760047 GCCGCCGCTCCTTGAGAA 62.760 66.667 0.00 0.00 0.00 2.87
832 873 5.583854 AGTCATTCTGTAGATGTACGTACGT 59.416 40.000 25.98 25.98 30.95 3.57
833 874 6.045698 AGTCATTCTGTAGATGTACGTACG 57.954 41.667 20.18 15.01 30.95 3.67
834 875 7.854916 GGTTAGTCATTCTGTAGATGTACGTAC 59.145 40.741 18.90 18.90 30.95 3.67
835 876 7.254556 CGGTTAGTCATTCTGTAGATGTACGTA 60.255 40.741 0.00 0.00 30.95 3.57
880 964 2.035832 GCAAACTGCACATTTGTAGGGT 59.964 45.455 16.33 0.00 44.26 4.34
893 977 4.683334 GGCGACCGTGCAAACTGC 62.683 66.667 0.00 0.00 45.29 4.40
894 978 2.972505 AGGCGACCGTGCAAACTG 60.973 61.111 0.00 0.00 36.28 3.16
895 979 2.972505 CAGGCGACCGTGCAAACT 60.973 61.111 0.00 0.00 36.28 2.66
896 980 3.276846 ACAGGCGACCGTGCAAAC 61.277 61.111 0.00 0.00 36.28 2.93
897 981 3.276091 CACAGGCGACCGTGCAAA 61.276 61.111 0.00 0.00 36.28 3.68
921 1005 9.755804 GTTACAACTCTTTTACAGGTACTAAGT 57.244 33.333 0.00 0.00 36.02 2.24
922 1006 9.978044 AGTTACAACTCTTTTACAGGTACTAAG 57.022 33.333 0.00 0.00 31.28 2.18
944 1028 1.472878 CGTGCTGGACTGCTAGAGTTA 59.527 52.381 0.00 0.00 33.83 2.24
946 1030 1.886585 CGTGCTGGACTGCTAGAGT 59.113 57.895 0.00 0.00 37.76 3.24
948 1032 2.573869 GCGTGCTGGACTGCTAGA 59.426 61.111 0.00 0.00 0.00 2.43
983 1067 1.133262 CCATAGTACTCGGGGAGGGAA 60.133 57.143 0.00 0.00 33.35 3.97
986 1070 0.178958 AGCCATAGTACTCGGGGAGG 60.179 60.000 13.08 3.63 33.35 4.30
987 1071 1.249407 GAGCCATAGTACTCGGGGAG 58.751 60.000 13.08 0.00 35.52 4.30
988 1072 0.178970 GGAGCCATAGTACTCGGGGA 60.179 60.000 13.08 0.00 33.55 4.81
989 1073 1.524863 CGGAGCCATAGTACTCGGGG 61.525 65.000 13.08 8.50 33.55 5.73
990 1074 1.524863 CCGGAGCCATAGTACTCGGG 61.525 65.000 0.00 3.20 44.02 5.14
991 1075 1.957562 CCGGAGCCATAGTACTCGG 59.042 63.158 0.00 2.30 33.55 4.63
992 1076 1.286260 GCCGGAGCCATAGTACTCG 59.714 63.158 5.05 0.00 33.55 4.18
994 1078 2.201022 CCGCCGGAGCCATAGTACT 61.201 63.158 5.05 0.00 34.57 2.73
1641 1741 0.382515 CGTCGATGAACTCTCCCTCC 59.617 60.000 0.00 0.00 0.00 4.30
1723 1823 2.740055 CACGTCCAGCTCCAGCAC 60.740 66.667 0.48 0.00 45.16 4.40
1827 1945 7.120726 GTCATTGTACCAAAGCATAGGTAAAGT 59.879 37.037 3.19 0.00 41.71 2.66
1830 1948 5.883673 GGTCATTGTACCAAAGCATAGGTAA 59.116 40.000 3.19 0.00 41.71 2.85
1845 1963 0.108186 CAGGCAGCGAGGTCATTGTA 60.108 55.000 0.00 0.00 0.00 2.41
1911 2029 1.296392 CAGCACCCAGATGAACCGA 59.704 57.895 0.00 0.00 35.00 4.69
2265 2383 3.181456 CCCTCTTGATGACCTCTTGGATC 60.181 52.174 0.00 0.00 37.04 3.36
2292 2410 1.810532 GATGCCTTCGTCGGAGTCT 59.189 57.895 0.00 0.00 0.00 3.24
2405 2523 1.400242 GCCTTCACTTTGTGATGCGAC 60.400 52.381 1.05 0.00 42.40 5.19
2425 2543 3.440173 AGTGTTTATTGACGCCAATCCTG 59.560 43.478 0.00 0.00 41.74 3.86
2426 2544 3.440173 CAGTGTTTATTGACGCCAATCCT 59.560 43.478 0.00 0.00 41.74 3.24
2427 2545 3.438781 TCAGTGTTTATTGACGCCAATCC 59.561 43.478 0.00 0.00 41.74 3.01
2445 2563 2.277969 CTGCAAGATCGAGCATTCAGT 58.722 47.619 14.14 0.00 40.42 3.41
2482 2612 2.286833 ACACTACAAATCACACACGTGC 59.713 45.455 17.22 0.00 43.28 5.34
2498 2630 3.431233 CGAACGTGACACTAGAGACACTA 59.569 47.826 17.26 0.00 0.00 2.74
2499 2631 2.223611 CGAACGTGACACTAGAGACACT 59.776 50.000 17.26 3.50 0.00 3.55
2560 2700 0.318784 GCTGTTCGTGAGTCCGAAGT 60.319 55.000 14.25 0.00 46.45 3.01
2561 2701 0.318699 TGCTGTTCGTGAGTCCGAAG 60.319 55.000 14.25 7.27 46.45 3.79
2562 2702 0.596600 GTGCTGTTCGTGAGTCCGAA 60.597 55.000 11.02 11.02 43.96 4.30
2563 2703 1.007734 GTGCTGTTCGTGAGTCCGA 60.008 57.895 0.31 0.31 34.52 4.55
2564 2704 1.004277 GAGTGCTGTTCGTGAGTCCG 61.004 60.000 0.00 0.00 0.00 4.79
2565 2705 0.315568 AGAGTGCTGTTCGTGAGTCC 59.684 55.000 0.00 0.00 0.00 3.85
2566 2706 1.001268 TCAGAGTGCTGTTCGTGAGTC 60.001 52.381 0.00 0.00 42.84 3.36
2567 2707 1.032794 TCAGAGTGCTGTTCGTGAGT 58.967 50.000 0.00 0.00 42.84 3.41
2568 2708 2.057316 CTTCAGAGTGCTGTTCGTGAG 58.943 52.381 0.00 0.00 42.84 3.51
2611 2751 3.300009 GCACAATTTGTCCTTTCAGACG 58.700 45.455 0.00 0.00 39.77 4.18
2710 3022 7.408132 TTTTCGAATCGAATGGTCATATCTC 57.592 36.000 19.17 0.00 45.28 2.75
2715 3027 7.857389 CACATATTTTTCGAATCGAATGGTCAT 59.143 33.333 19.17 9.12 45.28 3.06
2895 3216 2.093306 TACAGAGGAAATGGCGTGTG 57.907 50.000 0.00 0.00 0.00 3.82
2896 3217 2.038557 ACTTACAGAGGAAATGGCGTGT 59.961 45.455 0.00 0.00 0.00 4.49
3006 3329 2.229062 GCTAGTGTCAGCAGTCTACACA 59.771 50.000 7.49 0.00 44.68 3.72
3015 3338 0.606401 GGCCAAAGCTAGTGTCAGCA 60.606 55.000 0.00 0.00 44.35 4.41
3072 3395 7.800380 GTGAAACATGCATACTATAGCAACATC 59.200 37.037 0.00 0.00 44.88 3.06
3174 3557 3.243035 TGAGAACGACCAGCAACAATTTG 60.243 43.478 0.00 0.00 35.62 2.32
3195 3578 5.518865 TCCTCCCTTTTTCCAATCCTAATG 58.481 41.667 0.00 0.00 0.00 1.90
3212 3595 7.830099 AATTTCATCTTGTGATTATCCTCCC 57.170 36.000 0.00 0.00 36.54 4.30
3287 3671 5.638133 AGGATTTCAGATTATGGATGGTGG 58.362 41.667 0.00 0.00 0.00 4.61
3334 3718 3.665190 AGGCTAAGTCGAACTCTTTTGG 58.335 45.455 0.00 0.00 0.00 3.28
3343 3727 3.056749 GGAGTCTTTGAGGCTAAGTCGAA 60.057 47.826 0.00 0.00 24.78 3.71
3378 3762 5.652014 TGTAGGGATAAGAAAATTGTGGCTG 59.348 40.000 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.