Multiple sequence alignment - TraesCS2D01G407500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G407500 chr2D 100.000 3386 0 0 1 3386 522896787 522900172 0.000000e+00 6253
1 TraesCS2D01G407500 chr2D 78.216 1345 258 29 1019 2344 522629736 522631064 0.000000e+00 828
2 TraesCS2D01G407500 chr2D 78.365 1211 222 32 1007 2200 522752626 522753813 0.000000e+00 749
3 TraesCS2D01G407500 chr2D 76.548 1292 263 26 1001 2275 577609369 577608101 0.000000e+00 671
4 TraesCS2D01G407500 chr2D 74.909 1367 293 37 1001 2345 522749264 522750602 2.270000e-161 579
5 TraesCS2D01G407500 chr2B 95.025 1628 67 9 775 2401 615802411 615804025 0.000000e+00 2545
6 TraesCS2D01G407500 chr2B 78.127 1367 264 25 997 2344 615577822 615579172 0.000000e+00 835
7 TraesCS2D01G407500 chr2B 77.124 1224 242 31 1001 2208 694944101 694945302 0.000000e+00 675
8 TraesCS2D01G407500 chr2B 75.439 1368 284 39 1001 2345 615788464 615789802 4.800000e-173 617
9 TraesCS2D01G407500 chr2B 81.092 238 16 10 406 630 615801529 615801750 2.700000e-36 163
10 TraesCS2D01G407500 chr2B 96.386 83 3 0 705 787 615801744 615801826 1.640000e-28 137
11 TraesCS2D01G407500 chr2B 86.325 117 10 5 297 409 615801370 615801484 4.590000e-24 122
12 TraesCS2D01G407500 chr6B 97.101 966 26 1 2423 3386 139427957 139426992 0.000000e+00 1628
13 TraesCS2D01G407500 chr1B 96.992 964 17 2 2423 3386 152312908 152313859 0.000000e+00 1609
14 TraesCS2D01G407500 chr4B 96.888 964 18 6 2423 3386 593353488 593354439 0.000000e+00 1604
15 TraesCS2D01G407500 chr4B 91.348 497 30 4 2823 3312 250725637 250726127 0.000000e+00 667
16 TraesCS2D01G407500 chr4B 89.655 406 29 7 2418 2819 250708384 250708780 3.900000e-139 505
17 TraesCS2D01G407500 chr4B 90.789 76 7 0 3308 3383 250728419 250728494 5.980000e-18 102
18 TraesCS2D01G407500 chr7B 93.498 969 41 8 2433 3386 735316485 735315524 0.000000e+00 1421
19 TraesCS2D01G407500 chr3A 92.237 979 50 14 2423 3386 705308788 705307821 0.000000e+00 1363
20 TraesCS2D01G407500 chr3A 93.421 304 11 2 3089 3383 705303444 705303747 3.100000e-120 442
21 TraesCS2D01G407500 chr6D 89.946 925 61 14 2423 3333 158226760 158225854 0.000000e+00 1164
22 TraesCS2D01G407500 chr2A 78.477 1366 261 27 997 2344 667942222 667943572 0.000000e+00 863
23 TraesCS2D01G407500 chr2A 78.035 1211 226 31 1007 2200 667964302 667965489 0.000000e+00 726
24 TraesCS2D01G407500 chr2A 77.396 1221 244 26 1001 2208 715806813 715808014 0.000000e+00 697
25 TraesCS2D01G407500 chr4A 90.076 655 42 11 2740 3383 336063372 336064014 0.000000e+00 828
26 TraesCS2D01G407500 chr5D 91.917 532 27 6 2419 2944 390511565 390512086 0.000000e+00 730
27 TraesCS2D01G407500 chr1A 93.407 273 11 2 2425 2695 303740672 303740939 6.810000e-107 398
28 TraesCS2D01G407500 chr1A 77.816 577 68 23 2742 3285 249388594 249389143 5.490000e-78 302


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G407500 chr2D 522896787 522900172 3385 False 6253.00 6253 100.0000 1 3386 1 chr2D.!!$F2 3385
1 TraesCS2D01G407500 chr2D 522629736 522631064 1328 False 828.00 828 78.2160 1019 2344 1 chr2D.!!$F1 1325
2 TraesCS2D01G407500 chr2D 577608101 577609369 1268 True 671.00 671 76.5480 1001 2275 1 chr2D.!!$R1 1274
3 TraesCS2D01G407500 chr2D 522749264 522753813 4549 False 664.00 749 76.6370 1001 2345 2 chr2D.!!$F3 1344
4 TraesCS2D01G407500 chr2B 615577822 615579172 1350 False 835.00 835 78.1270 997 2344 1 chr2B.!!$F1 1347
5 TraesCS2D01G407500 chr2B 615801370 615804025 2655 False 741.75 2545 89.7070 297 2401 4 chr2B.!!$F4 2104
6 TraesCS2D01G407500 chr2B 694944101 694945302 1201 False 675.00 675 77.1240 1001 2208 1 chr2B.!!$F3 1207
7 TraesCS2D01G407500 chr2B 615788464 615789802 1338 False 617.00 617 75.4390 1001 2345 1 chr2B.!!$F2 1344
8 TraesCS2D01G407500 chr6B 139426992 139427957 965 True 1628.00 1628 97.1010 2423 3386 1 chr6B.!!$R1 963
9 TraesCS2D01G407500 chr1B 152312908 152313859 951 False 1609.00 1609 96.9920 2423 3386 1 chr1B.!!$F1 963
10 TraesCS2D01G407500 chr4B 593353488 593354439 951 False 1604.00 1604 96.8880 2423 3386 1 chr4B.!!$F2 963
11 TraesCS2D01G407500 chr4B 250725637 250728494 2857 False 384.50 667 91.0685 2823 3383 2 chr4B.!!$F3 560
12 TraesCS2D01G407500 chr7B 735315524 735316485 961 True 1421.00 1421 93.4980 2433 3386 1 chr7B.!!$R1 953
13 TraesCS2D01G407500 chr3A 705307821 705308788 967 True 1363.00 1363 92.2370 2423 3386 1 chr3A.!!$R1 963
14 TraesCS2D01G407500 chr6D 158225854 158226760 906 True 1164.00 1164 89.9460 2423 3333 1 chr6D.!!$R1 910
15 TraesCS2D01G407500 chr2A 667942222 667943572 1350 False 863.00 863 78.4770 997 2344 1 chr2A.!!$F1 1347
16 TraesCS2D01G407500 chr2A 667964302 667965489 1187 False 726.00 726 78.0350 1007 2200 1 chr2A.!!$F2 1193
17 TraesCS2D01G407500 chr2A 715806813 715808014 1201 False 697.00 697 77.3960 1001 2208 1 chr2A.!!$F3 1207
18 TraesCS2D01G407500 chr4A 336063372 336064014 642 False 828.00 828 90.0760 2740 3383 1 chr4A.!!$F1 643
19 TraesCS2D01G407500 chr5D 390511565 390512086 521 False 730.00 730 91.9170 2419 2944 1 chr5D.!!$F1 525
20 TraesCS2D01G407500 chr1A 249388594 249389143 549 False 302.00 302 77.8160 2742 3285 1 chr1A.!!$F1 543

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
28 29 0.179020 TCAGTTGACACAGGCCTTGG 60.179 55.0 0.0 0.0 0.0 3.61 F
886 1548 0.251634 TGGCTGGCATACGACATGAA 59.748 50.0 0.0 0.0 0.0 2.57 F
887 1549 0.940126 GGCTGGCATACGACATGAAG 59.060 55.0 0.0 0.0 0.0 3.02 F
2264 2940 0.038159 GAGAAGGCGATGGTATCCGG 60.038 60.0 0.0 0.0 0.0 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1941 2617 2.534019 CGACAGCAACTTGGCGTGT 61.534 57.895 0.0 0.0 44.43 4.49 R
2264 2940 1.061570 CTCGCTTGCAATCCTTCGC 59.938 57.895 0.0 0.0 0.00 4.70 R
2379 3055 1.794714 TAGTCCCCCTGCTTCATCTC 58.205 55.000 0.0 0.0 0.00 2.75 R
3081 4666 4.096732 ACCAAAATTATCTGCTGCGAAC 57.903 40.909 0.0 0.0 0.00 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.932167 GCGTCTTCTTCAGTTGACAC 57.068 50.000 0.00 0.00 0.00 3.67
20 21 2.201732 GCGTCTTCTTCAGTTGACACA 58.798 47.619 0.00 0.00 0.00 3.72
21 22 2.219674 GCGTCTTCTTCAGTTGACACAG 59.780 50.000 0.00 0.00 0.00 3.66
22 23 2.797156 CGTCTTCTTCAGTTGACACAGG 59.203 50.000 0.00 0.00 0.00 4.00
23 24 2.545946 GTCTTCTTCAGTTGACACAGGC 59.454 50.000 0.00 0.00 0.00 4.85
24 25 1.876156 CTTCTTCAGTTGACACAGGCC 59.124 52.381 0.00 0.00 0.00 5.19
25 26 1.131638 TCTTCAGTTGACACAGGCCT 58.868 50.000 0.00 0.00 0.00 5.19
26 27 1.490490 TCTTCAGTTGACACAGGCCTT 59.510 47.619 0.00 0.00 0.00 4.35
27 28 1.605710 CTTCAGTTGACACAGGCCTTG 59.394 52.381 0.00 8.04 0.00 3.61
28 29 0.179020 TCAGTTGACACAGGCCTTGG 60.179 55.000 0.00 0.00 0.00 3.61
29 30 1.151450 AGTTGACACAGGCCTTGGG 59.849 57.895 0.00 1.98 35.82 4.12
30 31 1.903404 GTTGACACAGGCCTTGGGG 60.903 63.158 0.00 0.00 33.14 4.96
31 32 2.081787 TTGACACAGGCCTTGGGGA 61.082 57.895 0.00 0.00 33.14 4.81
32 33 2.067932 TTGACACAGGCCTTGGGGAG 62.068 60.000 0.00 0.00 33.14 4.30
33 34 3.927481 GACACAGGCCTTGGGGAGC 62.927 68.421 0.00 0.00 33.14 4.70
34 35 3.970410 CACAGGCCTTGGGGAGCA 61.970 66.667 0.00 0.00 33.58 4.26
35 36 3.971702 ACAGGCCTTGGGGAGCAC 61.972 66.667 0.00 0.00 33.58 4.40
39 40 4.115199 GCCTTGGGGAGCACGGAT 62.115 66.667 0.00 0.00 33.58 4.18
40 41 2.677228 CCTTGGGGAGCACGGATT 59.323 61.111 0.00 0.00 33.58 3.01
41 42 1.912220 CCTTGGGGAGCACGGATTA 59.088 57.895 0.00 0.00 33.58 1.75
42 43 0.474184 CCTTGGGGAGCACGGATTAT 59.526 55.000 0.00 0.00 33.58 1.28
43 44 1.697432 CCTTGGGGAGCACGGATTATA 59.303 52.381 0.00 0.00 33.58 0.98
44 45 2.305927 CCTTGGGGAGCACGGATTATAT 59.694 50.000 0.00 0.00 33.58 0.86
45 46 3.338249 CTTGGGGAGCACGGATTATATG 58.662 50.000 0.00 0.00 0.00 1.78
46 47 2.615391 TGGGGAGCACGGATTATATGA 58.385 47.619 0.00 0.00 0.00 2.15
47 48 2.301870 TGGGGAGCACGGATTATATGAC 59.698 50.000 0.00 0.00 0.00 3.06
48 49 2.354805 GGGGAGCACGGATTATATGACC 60.355 54.545 0.00 0.00 0.00 4.02
49 50 2.567615 GGGAGCACGGATTATATGACCT 59.432 50.000 0.00 0.00 0.00 3.85
50 51 3.008049 GGGAGCACGGATTATATGACCTT 59.992 47.826 0.00 0.00 0.00 3.50
51 52 4.505039 GGGAGCACGGATTATATGACCTTT 60.505 45.833 0.00 0.00 0.00 3.11
52 53 4.691216 GGAGCACGGATTATATGACCTTTC 59.309 45.833 0.00 0.00 0.00 2.62
53 54 5.511545 GGAGCACGGATTATATGACCTTTCT 60.512 44.000 0.00 0.00 0.00 2.52
54 55 5.300752 AGCACGGATTATATGACCTTTCTG 58.699 41.667 0.00 0.00 0.00 3.02
55 56 4.083802 GCACGGATTATATGACCTTTCTGC 60.084 45.833 0.00 0.00 0.00 4.26
56 57 4.452455 CACGGATTATATGACCTTTCTGCC 59.548 45.833 0.00 0.00 0.00 4.85
57 58 4.348168 ACGGATTATATGACCTTTCTGCCT 59.652 41.667 0.00 0.00 0.00 4.75
58 59 5.163195 ACGGATTATATGACCTTTCTGCCTT 60.163 40.000 0.00 0.00 0.00 4.35
59 60 5.765182 CGGATTATATGACCTTTCTGCCTTT 59.235 40.000 0.00 0.00 0.00 3.11
60 61 6.073003 CGGATTATATGACCTTTCTGCCTTTC 60.073 42.308 0.00 0.00 0.00 2.62
61 62 6.207614 GGATTATATGACCTTTCTGCCTTTCC 59.792 42.308 0.00 0.00 0.00 3.13
62 63 2.222227 ATGACCTTTCTGCCTTTCCC 57.778 50.000 0.00 0.00 0.00 3.97
63 64 0.850100 TGACCTTTCTGCCTTTCCCA 59.150 50.000 0.00 0.00 0.00 4.37
64 65 1.216678 TGACCTTTCTGCCTTTCCCAA 59.783 47.619 0.00 0.00 0.00 4.12
65 66 2.158325 TGACCTTTCTGCCTTTCCCAAT 60.158 45.455 0.00 0.00 0.00 3.16
66 67 2.232208 GACCTTTCTGCCTTTCCCAATG 59.768 50.000 0.00 0.00 0.00 2.82
67 68 2.250924 CCTTTCTGCCTTTCCCAATGT 58.749 47.619 0.00 0.00 0.00 2.71
68 69 2.634453 CCTTTCTGCCTTTCCCAATGTT 59.366 45.455 0.00 0.00 0.00 2.71
69 70 3.831911 CCTTTCTGCCTTTCCCAATGTTA 59.168 43.478 0.00 0.00 0.00 2.41
70 71 4.467438 CCTTTCTGCCTTTCCCAATGTTAT 59.533 41.667 0.00 0.00 0.00 1.89
71 72 5.404466 TTTCTGCCTTTCCCAATGTTATG 57.596 39.130 0.00 0.00 0.00 1.90
72 73 4.046286 TCTGCCTTTCCCAATGTTATGT 57.954 40.909 0.00 0.00 0.00 2.29
73 74 5.186256 TCTGCCTTTCCCAATGTTATGTA 57.814 39.130 0.00 0.00 0.00 2.29
74 75 5.192927 TCTGCCTTTCCCAATGTTATGTAG 58.807 41.667 0.00 0.00 0.00 2.74
75 76 4.929479 TGCCTTTCCCAATGTTATGTAGT 58.071 39.130 0.00 0.00 0.00 2.73
76 77 4.947388 TGCCTTTCCCAATGTTATGTAGTC 59.053 41.667 0.00 0.00 0.00 2.59
77 78 5.193679 GCCTTTCCCAATGTTATGTAGTCT 58.806 41.667 0.00 0.00 0.00 3.24
78 79 5.652452 GCCTTTCCCAATGTTATGTAGTCTT 59.348 40.000 0.00 0.00 0.00 3.01
79 80 6.183360 GCCTTTCCCAATGTTATGTAGTCTTC 60.183 42.308 0.00 0.00 0.00 2.87
80 81 6.318900 CCTTTCCCAATGTTATGTAGTCTTCC 59.681 42.308 0.00 0.00 0.00 3.46
81 82 6.636454 TTCCCAATGTTATGTAGTCTTCCT 57.364 37.500 0.00 0.00 0.00 3.36
82 83 5.989477 TCCCAATGTTATGTAGTCTTCCTG 58.011 41.667 0.00 0.00 0.00 3.86
83 84 5.487488 TCCCAATGTTATGTAGTCTTCCTGT 59.513 40.000 0.00 0.00 0.00 4.00
84 85 6.670464 TCCCAATGTTATGTAGTCTTCCTGTA 59.330 38.462 0.00 0.00 0.00 2.74
85 86 7.181305 TCCCAATGTTATGTAGTCTTCCTGTAA 59.819 37.037 0.00 0.00 0.00 2.41
86 87 7.827236 CCCAATGTTATGTAGTCTTCCTGTAAA 59.173 37.037 0.00 0.00 0.00 2.01
87 88 9.396022 CCAATGTTATGTAGTCTTCCTGTAAAT 57.604 33.333 0.00 0.00 0.00 1.40
97 98 9.989869 GTAGTCTTCCTGTAAATTCTATTTTGC 57.010 33.333 0.00 0.00 0.00 3.68
98 99 7.752695 AGTCTTCCTGTAAATTCTATTTTGCG 58.247 34.615 0.00 0.00 0.00 4.85
99 100 7.606456 AGTCTTCCTGTAAATTCTATTTTGCGA 59.394 33.333 0.00 0.00 0.00 5.10
100 101 8.234546 GTCTTCCTGTAAATTCTATTTTGCGAA 58.765 33.333 0.00 0.00 0.00 4.70
101 102 8.788806 TCTTCCTGTAAATTCTATTTTGCGAAA 58.211 29.630 0.53 0.53 0.00 3.46
102 103 9.405587 CTTCCTGTAAATTCTATTTTGCGAAAA 57.594 29.630 2.54 0.00 34.41 2.29
103 104 9.751542 TTCCTGTAAATTCTATTTTGCGAAAAA 57.248 25.926 3.20 3.20 33.47 1.94
104 105 9.405587 TCCTGTAAATTCTATTTTGCGAAAAAG 57.594 29.630 7.50 0.00 33.47 2.27
105 106 9.191995 CCTGTAAATTCTATTTTGCGAAAAAGT 57.808 29.630 7.50 0.00 33.47 2.66
107 108 9.959749 TGTAAATTCTATTTTGCGAAAAAGTCT 57.040 25.926 7.50 0.00 33.47 3.24
110 111 8.520835 AATTCTATTTTGCGAAAAAGTCTTCC 57.479 30.769 7.50 0.00 33.47 3.46
111 112 6.877611 TCTATTTTGCGAAAAAGTCTTCCT 57.122 33.333 7.50 0.00 33.47 3.36
112 113 6.668323 TCTATTTTGCGAAAAAGTCTTCCTG 58.332 36.000 7.50 0.00 33.47 3.86
113 114 4.712122 TTTTGCGAAAAAGTCTTCCTGT 57.288 36.364 0.00 0.00 0.00 4.00
114 115 5.821516 TTTTGCGAAAAAGTCTTCCTGTA 57.178 34.783 0.00 0.00 0.00 2.74
115 116 5.821516 TTTGCGAAAAAGTCTTCCTGTAA 57.178 34.783 0.00 0.00 0.00 2.41
116 117 6.385649 TTTGCGAAAAAGTCTTCCTGTAAT 57.614 33.333 0.00 0.00 0.00 1.89
117 118 5.607119 TGCGAAAAAGTCTTCCTGTAATC 57.393 39.130 0.00 0.00 0.00 1.75
118 119 5.305585 TGCGAAAAAGTCTTCCTGTAATCT 58.694 37.500 0.00 0.00 0.00 2.40
119 120 5.763204 TGCGAAAAAGTCTTCCTGTAATCTT 59.237 36.000 0.00 0.00 0.00 2.40
120 121 6.262273 TGCGAAAAAGTCTTCCTGTAATCTTT 59.738 34.615 0.00 0.00 0.00 2.52
121 122 6.578919 GCGAAAAAGTCTTCCTGTAATCTTTG 59.421 38.462 0.00 0.00 0.00 2.77
122 123 7.519970 GCGAAAAAGTCTTCCTGTAATCTTTGA 60.520 37.037 0.00 0.00 0.00 2.69
123 124 7.798982 CGAAAAAGTCTTCCTGTAATCTTTGAC 59.201 37.037 0.00 0.00 0.00 3.18
124 125 8.519799 AAAAAGTCTTCCTGTAATCTTTGACA 57.480 30.769 0.00 0.00 0.00 3.58
125 126 8.519799 AAAAGTCTTCCTGTAATCTTTGACAA 57.480 30.769 0.00 0.00 0.00 3.18
126 127 8.697507 AAAGTCTTCCTGTAATCTTTGACAAT 57.302 30.769 0.00 0.00 0.00 2.71
127 128 7.913674 AGTCTTCCTGTAATCTTTGACAATC 57.086 36.000 0.00 0.00 0.00 2.67
128 129 7.684529 AGTCTTCCTGTAATCTTTGACAATCT 58.315 34.615 0.00 0.00 0.00 2.40
129 130 8.816894 AGTCTTCCTGTAATCTTTGACAATCTA 58.183 33.333 0.00 0.00 0.00 1.98
130 131 9.436957 GTCTTCCTGTAATCTTTGACAATCTAA 57.563 33.333 0.00 0.00 0.00 2.10
143 144 9.956720 CTTTGACAATCTAAAAAGATGTCTTGT 57.043 29.630 5.88 5.98 36.12 3.16
146 147 9.734620 TGACAATCTAAAAAGATGTCTTGTTTG 57.265 29.630 3.67 2.79 35.23 2.93
147 148 9.950680 GACAATCTAAAAAGATGTCTTGTTTGA 57.049 29.630 10.69 10.69 38.57 2.69
148 149 9.736023 ACAATCTAAAAAGATGTCTTGTTTGAC 57.264 29.630 10.56 0.00 37.61 3.18
149 150 9.185192 CAATCTAAAAAGATGTCTTGTTTGACC 57.815 33.333 10.56 0.00 37.61 4.02
150 151 7.873719 TCTAAAAAGATGTCTTGTTTGACCA 57.126 32.000 3.67 0.00 35.23 4.02
151 152 8.287439 TCTAAAAAGATGTCTTGTTTGACCAA 57.713 30.769 3.67 0.00 35.23 3.67
152 153 8.744652 TCTAAAAAGATGTCTTGTTTGACCAAA 58.255 29.630 3.67 0.00 35.23 3.28
153 154 7.832503 AAAAAGATGTCTTGTTTGACCAAAG 57.167 32.000 0.00 0.00 36.12 2.77
154 155 6.530019 AAAGATGTCTTGTTTGACCAAAGT 57.470 33.333 0.00 0.00 36.12 2.66
155 156 5.505173 AGATGTCTTGTTTGACCAAAGTG 57.495 39.130 0.00 0.00 36.21 3.16
156 157 4.949856 AGATGTCTTGTTTGACCAAAGTGT 59.050 37.500 0.00 0.00 36.21 3.55
157 158 5.418840 AGATGTCTTGTTTGACCAAAGTGTT 59.581 36.000 0.00 0.00 36.21 3.32
158 159 5.054390 TGTCTTGTTTGACCAAAGTGTTC 57.946 39.130 0.00 0.00 36.21 3.18
159 160 4.520874 TGTCTTGTTTGACCAAAGTGTTCA 59.479 37.500 0.00 0.00 36.21 3.18
160 161 4.857037 GTCTTGTTTGACCAAAGTGTTCAC 59.143 41.667 0.00 0.00 0.00 3.18
161 162 4.520874 TCTTGTTTGACCAAAGTGTTCACA 59.479 37.500 5.74 0.00 0.00 3.58
162 163 5.184864 TCTTGTTTGACCAAAGTGTTCACAT 59.815 36.000 5.74 0.00 0.00 3.21
163 164 5.398603 TGTTTGACCAAAGTGTTCACATT 57.601 34.783 5.74 0.00 0.00 2.71
164 165 5.167121 TGTTTGACCAAAGTGTTCACATTG 58.833 37.500 12.12 12.12 0.00 2.82
165 166 3.435105 TGACCAAAGTGTTCACATTGC 57.565 42.857 13.22 4.34 0.00 3.56
166 167 2.757314 TGACCAAAGTGTTCACATTGCA 59.243 40.909 13.22 6.35 0.00 4.08
167 168 3.115554 GACCAAAGTGTTCACATTGCAC 58.884 45.455 13.22 7.28 0.00 4.57
168 169 2.118683 CCAAAGTGTTCACATTGCACG 58.881 47.619 13.22 0.33 38.10 5.34
169 170 2.223456 CCAAAGTGTTCACATTGCACGA 60.223 45.455 13.22 0.00 38.10 4.35
170 171 3.433709 CAAAGTGTTCACATTGCACGAA 58.566 40.909 7.73 0.00 38.10 3.85
171 172 3.988379 AAGTGTTCACATTGCACGAAT 57.012 38.095 5.74 0.00 38.10 3.34
172 173 3.988379 AGTGTTCACATTGCACGAATT 57.012 38.095 5.74 0.00 38.10 2.17
173 174 3.631144 AGTGTTCACATTGCACGAATTG 58.369 40.909 5.74 0.00 38.10 2.32
174 175 3.314913 AGTGTTCACATTGCACGAATTGA 59.685 39.130 5.74 0.00 38.10 2.57
175 176 3.421888 GTGTTCACATTGCACGAATTGAC 59.578 43.478 0.00 0.00 0.00 3.18
176 177 3.065925 TGTTCACATTGCACGAATTGACA 59.934 39.130 0.00 0.00 0.00 3.58
177 178 4.229096 GTTCACATTGCACGAATTGACAT 58.771 39.130 0.00 0.00 0.00 3.06
178 179 5.049129 TGTTCACATTGCACGAATTGACATA 60.049 36.000 0.00 0.00 0.00 2.29
179 180 5.816449 TCACATTGCACGAATTGACATAT 57.184 34.783 0.00 0.00 0.00 1.78
180 181 5.571277 TCACATTGCACGAATTGACATATG 58.429 37.500 0.00 0.00 0.00 1.78
181 182 4.736307 CACATTGCACGAATTGACATATGG 59.264 41.667 7.80 0.00 0.00 2.74
182 183 4.398988 ACATTGCACGAATTGACATATGGT 59.601 37.500 7.80 0.00 0.00 3.55
183 184 4.354071 TTGCACGAATTGACATATGGTG 57.646 40.909 7.80 4.79 0.00 4.17
184 185 2.097304 TGCACGAATTGACATATGGTGC 59.903 45.455 18.42 18.42 46.83 5.01
185 186 2.355756 GCACGAATTGACATATGGTGCT 59.644 45.455 18.14 0.00 44.19 4.40
186 187 3.546815 GCACGAATTGACATATGGTGCTC 60.547 47.826 18.14 4.44 44.19 4.26
187 188 3.002656 CACGAATTGACATATGGTGCTCC 59.997 47.826 7.80 0.00 0.00 4.70
196 197 4.988744 TGGTGCTCCAAAAACGGA 57.011 50.000 4.68 0.00 41.25 4.69
197 198 2.410466 TGGTGCTCCAAAAACGGAC 58.590 52.632 4.68 0.00 41.25 4.79
198 199 0.394488 TGGTGCTCCAAAAACGGACA 60.394 50.000 4.68 0.00 41.25 4.02
199 200 0.958822 GGTGCTCCAAAAACGGACAT 59.041 50.000 0.00 0.00 0.00 3.06
200 201 2.156098 GGTGCTCCAAAAACGGACATA 58.844 47.619 0.00 0.00 0.00 2.29
201 202 2.554893 GGTGCTCCAAAAACGGACATAA 59.445 45.455 0.00 0.00 0.00 1.90
202 203 3.004944 GGTGCTCCAAAAACGGACATAAA 59.995 43.478 0.00 0.00 0.00 1.40
203 204 4.500035 GGTGCTCCAAAAACGGACATAAAA 60.500 41.667 0.00 0.00 0.00 1.52
204 205 5.227152 GTGCTCCAAAAACGGACATAAAAT 58.773 37.500 0.00 0.00 0.00 1.82
205 206 5.694458 GTGCTCCAAAAACGGACATAAAATT 59.306 36.000 0.00 0.00 0.00 1.82
206 207 5.694006 TGCTCCAAAAACGGACATAAAATTG 59.306 36.000 0.00 0.00 0.00 2.32
207 208 5.694458 GCTCCAAAAACGGACATAAAATTGT 59.306 36.000 0.00 0.00 0.00 2.71
208 209 6.864165 GCTCCAAAAACGGACATAAAATTGTA 59.136 34.615 0.00 0.00 0.00 2.41
209 210 7.544217 GCTCCAAAAACGGACATAAAATTGTAT 59.456 33.333 0.00 0.00 0.00 2.29
210 211 9.418045 CTCCAAAAACGGACATAAAATTGTATT 57.582 29.630 0.00 0.00 0.00 1.89
211 212 9.765795 TCCAAAAACGGACATAAAATTGTATTT 57.234 25.926 0.00 0.00 0.00 1.40
215 216 8.442605 AAACGGACATAAAATTGTATTTCACG 57.557 30.769 4.55 7.32 0.00 4.35
216 217 6.025280 ACGGACATAAAATTGTATTTCACGC 58.975 36.000 4.55 0.00 0.00 5.34
217 218 6.128117 ACGGACATAAAATTGTATTTCACGCT 60.128 34.615 4.55 0.00 0.00 5.07
218 219 7.064847 ACGGACATAAAATTGTATTTCACGCTA 59.935 33.333 4.55 0.00 0.00 4.26
219 220 7.372396 CGGACATAAAATTGTATTTCACGCTAC 59.628 37.037 4.55 0.00 0.00 3.58
220 221 7.642586 GGACATAAAATTGTATTTCACGCTACC 59.357 37.037 4.55 0.00 0.00 3.18
221 222 8.046294 ACATAAAATTGTATTTCACGCTACCA 57.954 30.769 0.00 0.00 0.00 3.25
222 223 8.682710 ACATAAAATTGTATTTCACGCTACCAT 58.317 29.630 0.00 0.00 0.00 3.55
223 224 9.169468 CATAAAATTGTATTTCACGCTACCATC 57.831 33.333 0.00 0.00 0.00 3.51
224 225 6.751514 AAATTGTATTTCACGCTACCATCA 57.248 33.333 0.00 0.00 0.00 3.07
225 226 6.942532 AATTGTATTTCACGCTACCATCAT 57.057 33.333 0.00 0.00 0.00 2.45
226 227 8.445275 AAATTGTATTTCACGCTACCATCATA 57.555 30.769 0.00 0.00 0.00 2.15
227 228 7.658179 ATTGTATTTCACGCTACCATCATAG 57.342 36.000 0.00 0.00 0.00 2.23
228 229 6.399639 TGTATTTCACGCTACCATCATAGA 57.600 37.500 0.00 0.00 0.00 1.98
229 230 6.993079 TGTATTTCACGCTACCATCATAGAT 58.007 36.000 0.00 0.00 0.00 1.98
230 231 7.441836 TGTATTTCACGCTACCATCATAGATT 58.558 34.615 0.00 0.00 0.00 2.40
231 232 7.598869 TGTATTTCACGCTACCATCATAGATTC 59.401 37.037 0.00 0.00 0.00 2.52
232 233 5.791336 TTCACGCTACCATCATAGATTCT 57.209 39.130 0.00 0.00 0.00 2.40
233 234 5.378292 TCACGCTACCATCATAGATTCTC 57.622 43.478 0.00 0.00 0.00 2.87
234 235 4.218635 TCACGCTACCATCATAGATTCTCC 59.781 45.833 0.00 0.00 0.00 3.71
235 236 3.191581 ACGCTACCATCATAGATTCTCCG 59.808 47.826 0.00 0.00 0.00 4.63
236 237 3.428180 CGCTACCATCATAGATTCTCCGG 60.428 52.174 0.00 0.00 0.00 5.14
237 238 3.511934 GCTACCATCATAGATTCTCCGGT 59.488 47.826 0.00 0.00 0.00 5.28
238 239 4.381079 GCTACCATCATAGATTCTCCGGTC 60.381 50.000 0.00 0.00 0.00 4.79
239 240 3.850752 ACCATCATAGATTCTCCGGTCT 58.149 45.455 0.00 0.00 0.00 3.85
240 241 4.227197 ACCATCATAGATTCTCCGGTCTT 58.773 43.478 0.00 0.00 0.00 3.01
241 242 4.656112 ACCATCATAGATTCTCCGGTCTTT 59.344 41.667 0.00 0.00 0.00 2.52
242 243 5.839063 ACCATCATAGATTCTCCGGTCTTTA 59.161 40.000 0.00 0.00 0.00 1.85
243 244 6.015010 ACCATCATAGATTCTCCGGTCTTTAG 60.015 42.308 0.00 0.00 0.00 1.85
244 245 6.209589 CCATCATAGATTCTCCGGTCTTTAGA 59.790 42.308 0.00 0.00 0.00 2.10
245 246 6.636562 TCATAGATTCTCCGGTCTTTAGAC 57.363 41.667 0.00 1.18 44.04 2.59
246 247 6.127101 TCATAGATTCTCCGGTCTTTAGACA 58.873 40.000 11.67 0.00 46.47 3.41
247 248 6.778069 TCATAGATTCTCCGGTCTTTAGACAT 59.222 38.462 11.67 0.00 46.47 3.06
248 249 5.941555 AGATTCTCCGGTCTTTAGACATT 57.058 39.130 11.67 0.00 46.47 2.71
249 250 5.908341 AGATTCTCCGGTCTTTAGACATTC 58.092 41.667 11.67 0.00 46.47 2.67
250 251 3.777465 TCTCCGGTCTTTAGACATTCG 57.223 47.619 11.67 6.22 46.47 3.34
251 252 3.087031 TCTCCGGTCTTTAGACATTCGT 58.913 45.455 11.67 0.00 46.47 3.85
252 253 3.119602 TCTCCGGTCTTTAGACATTCGTG 60.120 47.826 11.67 2.91 46.47 4.35
253 254 1.659098 CCGGTCTTTAGACATTCGTGC 59.341 52.381 11.67 0.00 46.47 5.34
254 255 1.320555 CGGTCTTTAGACATTCGTGCG 59.679 52.381 11.67 1.06 46.47 5.34
255 256 2.334838 GGTCTTTAGACATTCGTGCGT 58.665 47.619 11.67 0.00 46.47 5.24
256 257 2.735134 GGTCTTTAGACATTCGTGCGTT 59.265 45.455 11.67 0.00 46.47 4.84
257 258 3.922240 GGTCTTTAGACATTCGTGCGTTA 59.078 43.478 11.67 0.00 46.47 3.18
258 259 4.386652 GGTCTTTAGACATTCGTGCGTTAA 59.613 41.667 11.67 0.00 46.47 2.01
259 260 5.444218 GGTCTTTAGACATTCGTGCGTTAAG 60.444 44.000 11.67 0.00 46.47 1.85
260 261 5.118203 GTCTTTAGACATTCGTGCGTTAAGT 59.882 40.000 5.04 0.00 44.18 2.24
261 262 5.693104 TCTTTAGACATTCGTGCGTTAAGTT 59.307 36.000 0.00 0.00 0.00 2.66
262 263 5.505165 TTAGACATTCGTGCGTTAAGTTC 57.495 39.130 0.00 0.00 0.00 3.01
263 264 3.386486 AGACATTCGTGCGTTAAGTTCA 58.614 40.909 0.00 0.00 0.00 3.18
264 265 3.428870 AGACATTCGTGCGTTAAGTTCAG 59.571 43.478 0.00 0.00 0.00 3.02
265 266 3.128349 ACATTCGTGCGTTAAGTTCAGT 58.872 40.909 0.00 0.00 0.00 3.41
266 267 3.183775 ACATTCGTGCGTTAAGTTCAGTC 59.816 43.478 0.00 0.00 0.00 3.51
267 268 1.401530 TCGTGCGTTAAGTTCAGTCG 58.598 50.000 0.00 0.00 0.00 4.18
268 269 0.433492 CGTGCGTTAAGTTCAGTCGG 59.567 55.000 0.00 0.00 0.00 4.79
269 270 1.494824 GTGCGTTAAGTTCAGTCGGT 58.505 50.000 0.00 0.00 0.00 4.69
270 271 1.191647 GTGCGTTAAGTTCAGTCGGTG 59.808 52.381 0.00 0.00 0.00 4.94
271 272 1.067364 TGCGTTAAGTTCAGTCGGTGA 59.933 47.619 0.00 0.00 0.00 4.02
272 273 1.719780 GCGTTAAGTTCAGTCGGTGAG 59.280 52.381 0.00 0.00 36.21 3.51
273 274 2.325761 CGTTAAGTTCAGTCGGTGAGG 58.674 52.381 0.00 0.00 36.21 3.86
274 275 2.685100 GTTAAGTTCAGTCGGTGAGGG 58.315 52.381 0.00 0.00 36.21 4.30
275 276 2.005370 TAAGTTCAGTCGGTGAGGGT 57.995 50.000 0.00 0.00 36.21 4.34
276 277 0.393077 AAGTTCAGTCGGTGAGGGTG 59.607 55.000 0.00 0.00 36.21 4.61
277 278 1.668151 GTTCAGTCGGTGAGGGTGC 60.668 63.158 0.00 0.00 36.21 5.01
278 279 3.220999 TTCAGTCGGTGAGGGTGCG 62.221 63.158 0.00 0.00 36.21 5.34
279 280 3.991051 CAGTCGGTGAGGGTGCGT 61.991 66.667 0.00 0.00 0.00 5.24
280 281 2.282674 AGTCGGTGAGGGTGCGTA 60.283 61.111 0.00 0.00 0.00 4.42
281 282 2.126189 GTCGGTGAGGGTGCGTAC 60.126 66.667 0.00 0.00 0.00 3.67
282 283 3.376078 TCGGTGAGGGTGCGTACC 61.376 66.667 15.14 15.14 46.76 3.34
294 295 4.842091 CGTACCCCTTCGCCGACG 62.842 72.222 0.00 0.00 42.01 5.12
321 322 6.630444 GGTACCTTAGTATGTTCGAGATGA 57.370 41.667 4.06 0.00 0.00 2.92
409 413 9.885743 CAACGTAAAGAAAACTTGAATCTTTTG 57.114 29.630 5.44 2.75 41.98 2.44
460 512 4.932200 ACGTGCAAATTTTGGTGAAGAAAA 59.068 33.333 10.96 0.00 0.00 2.29
461 513 5.163903 ACGTGCAAATTTTGGTGAAGAAAAC 60.164 36.000 10.96 0.00 0.00 2.43
475 527 6.587608 GGTGAAGAAAACATTCCTAAATGCTG 59.412 38.462 0.00 0.00 45.16 4.41
476 528 6.089954 GTGAAGAAAACATTCCTAAATGCTGC 59.910 38.462 0.00 0.00 45.16 5.25
541 595 2.543012 TGCAAATCAATGTTTGTTGCCG 59.457 40.909 10.95 0.00 40.12 5.69
542 596 2.799412 GCAAATCAATGTTTGTTGCCGA 59.201 40.909 9.00 0.00 40.38 5.54
617 682 1.856629 ATGGGGGAACATTTGAGCTG 58.143 50.000 0.00 0.00 0.00 4.24
622 687 1.815003 GGGAACATTTGAGCTGGTGAG 59.185 52.381 0.00 0.00 0.00 3.51
623 688 1.200948 GGAACATTTGAGCTGGTGAGC 59.799 52.381 0.00 0.00 46.64 4.26
631 696 4.275524 GCTGGTGAGCAGACAGAC 57.724 61.111 16.83 0.00 45.46 3.51
632 697 1.368950 GCTGGTGAGCAGACAGACA 59.631 57.895 16.83 0.00 45.46 3.41
633 698 0.948141 GCTGGTGAGCAGACAGACAC 60.948 60.000 16.83 0.00 45.46 3.67
634 699 0.678395 CTGGTGAGCAGACAGACACT 59.322 55.000 5.59 0.00 34.21 3.55
635 700 1.069823 CTGGTGAGCAGACAGACACTT 59.930 52.381 5.59 0.00 34.21 3.16
636 701 1.486310 TGGTGAGCAGACAGACACTTT 59.514 47.619 0.00 0.00 34.28 2.66
637 702 2.139118 GGTGAGCAGACAGACACTTTC 58.861 52.381 0.00 0.00 34.28 2.62
638 703 1.789464 GTGAGCAGACAGACACTTTCG 59.211 52.381 0.00 0.00 0.00 3.46
639 704 0.787183 GAGCAGACAGACACTTTCGC 59.213 55.000 0.00 0.00 0.00 4.70
640 705 0.601311 AGCAGACAGACACTTTCGCC 60.601 55.000 0.00 0.00 0.00 5.54
641 706 0.880278 GCAGACAGACACTTTCGCCA 60.880 55.000 0.00 0.00 0.00 5.69
642 707 1.143305 CAGACAGACACTTTCGCCAG 58.857 55.000 0.00 0.00 0.00 4.85
643 708 1.040646 AGACAGACACTTTCGCCAGA 58.959 50.000 0.00 0.00 0.00 3.86
644 709 1.140816 GACAGACACTTTCGCCAGAC 58.859 55.000 0.00 0.00 0.00 3.51
645 710 0.597637 ACAGACACTTTCGCCAGACG 60.598 55.000 0.00 0.00 45.62 4.18
646 711 0.597637 CAGACACTTTCGCCAGACGT 60.598 55.000 0.00 0.00 44.19 4.34
647 712 0.597637 AGACACTTTCGCCAGACGTG 60.598 55.000 0.00 0.00 44.19 4.49
649 714 1.594293 CACTTTCGCCAGACGTGGT 60.594 57.895 0.00 0.00 46.96 4.16
650 715 0.319211 CACTTTCGCCAGACGTGGTA 60.319 55.000 0.00 0.00 46.96 3.25
651 716 0.390124 ACTTTCGCCAGACGTGGTAA 59.610 50.000 0.00 0.00 46.96 2.85
652 717 1.202557 ACTTTCGCCAGACGTGGTAAA 60.203 47.619 0.00 0.00 46.96 2.01
653 718 2.073816 CTTTCGCCAGACGTGGTAAAT 58.926 47.619 0.00 0.00 46.96 1.40
654 719 2.172851 TTCGCCAGACGTGGTAAATT 57.827 45.000 0.00 0.00 46.96 1.82
655 720 2.172851 TCGCCAGACGTGGTAAATTT 57.827 45.000 0.00 0.00 46.96 1.82
656 721 2.070783 TCGCCAGACGTGGTAAATTTC 58.929 47.619 0.00 0.00 46.96 2.17
657 722 2.073816 CGCCAGACGTGGTAAATTTCT 58.926 47.619 0.00 0.00 46.96 2.52
658 723 2.482721 CGCCAGACGTGGTAAATTTCTT 59.517 45.455 0.00 0.00 46.96 2.52
659 724 3.666902 CGCCAGACGTGGTAAATTTCTTG 60.667 47.826 0.00 0.00 46.96 3.02
660 725 3.500680 GCCAGACGTGGTAAATTTCTTGA 59.499 43.478 0.00 0.00 46.96 3.02
661 726 4.378459 GCCAGACGTGGTAAATTTCTTGAG 60.378 45.833 0.00 0.00 46.96 3.02
662 727 4.994852 CCAGACGTGGTAAATTTCTTGAGA 59.005 41.667 0.00 0.00 39.30 3.27
663 728 5.643777 CCAGACGTGGTAAATTTCTTGAGAT 59.356 40.000 0.00 0.00 39.30 2.75
664 729 6.402550 CCAGACGTGGTAAATTTCTTGAGATG 60.403 42.308 0.00 0.00 39.30 2.90
665 730 6.368791 CAGACGTGGTAAATTTCTTGAGATGA 59.631 38.462 0.00 0.00 0.00 2.92
666 731 7.065085 CAGACGTGGTAAATTTCTTGAGATGAT 59.935 37.037 0.00 0.00 0.00 2.45
667 732 7.065085 AGACGTGGTAAATTTCTTGAGATGATG 59.935 37.037 0.00 0.00 0.00 3.07
668 733 6.878923 ACGTGGTAAATTTCTTGAGATGATGA 59.121 34.615 0.00 0.00 0.00 2.92
669 734 7.390440 ACGTGGTAAATTTCTTGAGATGATGAA 59.610 33.333 0.00 0.00 0.00 2.57
670 735 7.907045 CGTGGTAAATTTCTTGAGATGATGAAG 59.093 37.037 0.00 0.00 0.00 3.02
671 736 8.734386 GTGGTAAATTTCTTGAGATGATGAAGT 58.266 33.333 0.00 0.00 0.00 3.01
672 737 8.733458 TGGTAAATTTCTTGAGATGATGAAGTG 58.267 33.333 0.00 0.00 0.00 3.16
673 738 8.950210 GGTAAATTTCTTGAGATGATGAAGTGA 58.050 33.333 0.00 0.00 0.00 3.41
674 739 9.766277 GTAAATTTCTTGAGATGATGAAGTGAC 57.234 33.333 0.00 0.00 0.00 3.67
675 740 7.991084 AATTTCTTGAGATGATGAAGTGACA 57.009 32.000 0.00 0.00 0.00 3.58
676 741 8.577048 AATTTCTTGAGATGATGAAGTGACAT 57.423 30.769 0.00 0.00 0.00 3.06
677 742 7.606858 TTTCTTGAGATGATGAAGTGACATC 57.393 36.000 0.00 0.00 44.58 3.06
678 743 5.346522 TCTTGAGATGATGAAGTGACATCG 58.653 41.667 0.00 0.00 46.49 3.84
679 744 4.050852 TGAGATGATGAAGTGACATCGG 57.949 45.455 0.00 0.00 46.49 4.18
680 745 3.701040 TGAGATGATGAAGTGACATCGGA 59.299 43.478 0.00 0.00 46.49 4.55
681 746 4.343239 TGAGATGATGAAGTGACATCGGAT 59.657 41.667 0.00 0.00 46.49 4.18
682 747 4.880759 AGATGATGAAGTGACATCGGATC 58.119 43.478 0.00 0.00 46.49 3.36
683 748 3.084070 TGATGAAGTGACATCGGATCG 57.916 47.619 0.00 0.00 46.49 3.69
684 749 1.789464 GATGAAGTGACATCGGATCGC 59.211 52.381 0.00 0.00 37.50 4.58
685 750 0.525455 TGAAGTGACATCGGATCGCG 60.525 55.000 0.00 0.00 0.00 5.87
686 751 1.812214 GAAGTGACATCGGATCGCGC 61.812 60.000 0.00 0.00 0.00 6.86
687 752 2.557059 AAGTGACATCGGATCGCGCA 62.557 55.000 8.75 0.00 0.00 6.09
688 753 2.582226 TGACATCGGATCGCGCAC 60.582 61.111 8.75 0.00 0.00 5.34
689 754 3.682315 GACATCGGATCGCGCACG 61.682 66.667 8.75 5.84 42.01 5.34
691 756 4.923710 CATCGGATCGCGCACGGA 62.924 66.667 8.75 8.14 40.63 4.69
692 757 4.925576 ATCGGATCGCGCACGGAC 62.926 66.667 8.75 0.00 40.63 4.79
695 760 4.891727 GGATCGCGCACGGACCAT 62.892 66.667 8.75 0.00 40.63 3.55
696 761 2.890474 GATCGCGCACGGACCATT 60.890 61.111 8.75 0.00 40.63 3.16
697 762 2.871427 GATCGCGCACGGACCATTC 61.871 63.158 8.75 0.00 40.63 2.67
700 765 2.890474 GCGCACGGACCATTCGAT 60.890 61.111 0.30 0.00 0.00 3.59
701 766 1.590525 GCGCACGGACCATTCGATA 60.591 57.895 0.30 0.00 0.00 2.92
702 767 0.944311 GCGCACGGACCATTCGATAT 60.944 55.000 0.30 0.00 0.00 1.63
703 768 1.497991 CGCACGGACCATTCGATATT 58.502 50.000 0.00 0.00 0.00 1.28
741 806 4.502604 GGTTGCTAGTACTTGTCAGGTCAA 60.503 45.833 0.00 0.00 0.00 3.18
760 825 0.392998 ATCAACAGACCGGCACCATC 60.393 55.000 0.00 0.00 0.00 3.51
792 1454 3.808174 GGCGACTAGTTGAACAGTTTCTT 59.192 43.478 14.70 0.00 32.36 2.52
793 1455 4.986659 GGCGACTAGTTGAACAGTTTCTTA 59.013 41.667 14.70 0.00 32.36 2.10
795 1457 5.388578 GCGACTAGTTGAACAGTTTCTTAGC 60.389 44.000 14.70 0.00 32.36 3.09
796 1458 5.164177 CGACTAGTTGAACAGTTTCTTAGCG 60.164 44.000 3.81 0.00 32.36 4.26
797 1459 4.989168 ACTAGTTGAACAGTTTCTTAGCGG 59.011 41.667 0.00 0.00 32.36 5.52
798 1460 4.067972 AGTTGAACAGTTTCTTAGCGGA 57.932 40.909 0.00 0.00 32.36 5.54
799 1461 4.448210 AGTTGAACAGTTTCTTAGCGGAA 58.552 39.130 0.00 0.00 32.36 4.30
801 1463 5.007724 AGTTGAACAGTTTCTTAGCGGAAAG 59.992 40.000 0.00 0.00 36.12 2.62
802 1464 4.699637 TGAACAGTTTCTTAGCGGAAAGA 58.300 39.130 3.52 0.05 36.12 2.52
803 1465 5.120399 TGAACAGTTTCTTAGCGGAAAGAA 58.880 37.500 7.56 7.56 42.32 2.52
804 1466 5.236478 TGAACAGTTTCTTAGCGGAAAGAAG 59.764 40.000 10.46 4.65 44.15 2.85
824 1486 1.562017 GGAAAGATCTTCGGAGTCGC 58.438 55.000 8.78 0.00 36.13 5.19
878 1540 2.291741 GCTATCAGTTTGGCTGGCATAC 59.708 50.000 15.19 15.19 45.08 2.39
886 1548 0.251634 TGGCTGGCATACGACATGAA 59.748 50.000 0.00 0.00 0.00 2.57
887 1549 0.940126 GGCTGGCATACGACATGAAG 59.060 55.000 0.00 0.00 0.00 3.02
888 1550 1.656652 GCTGGCATACGACATGAAGT 58.343 50.000 0.00 0.93 0.00 3.01
911 1573 5.435686 AGTGTACATATTTCTTCAGGGCA 57.564 39.130 0.00 0.00 0.00 5.36
917 1579 1.852157 ATTTCTTCAGGGCAGGGCGA 61.852 55.000 0.00 0.00 0.00 5.54
919 1581 4.479993 CTTCAGGGCAGGGCGAGG 62.480 72.222 0.00 0.00 0.00 4.63
979 1641 1.138883 TGCGCTGTGTACTCGATCC 59.861 57.895 9.73 0.00 0.00 3.36
1065 1727 1.302285 CCTGAACCAGCTCCTGCAT 59.698 57.895 0.00 0.00 42.74 3.96
1890 2566 1.375908 GTTCATCTGGGTGCTGCGA 60.376 57.895 0.00 0.00 0.00 5.10
1927 2603 1.333308 TCAACGACGTACACGAGGAAA 59.667 47.619 9.04 0.00 43.02 3.13
1941 2617 1.896660 GGAAAGCACTGACGGCCAA 60.897 57.895 2.24 0.00 0.00 4.52
1960 2636 2.108157 ACGCCAAGTTGCTGTCGA 59.892 55.556 0.00 0.00 0.00 4.20
2004 2680 3.458163 GGGCTCGTGATCACCGGA 61.458 66.667 20.03 11.30 0.00 5.14
2233 2909 3.822192 TGCCGTCGGAGGTCATCG 61.822 66.667 17.49 0.00 0.00 3.84
2235 2911 4.570663 CCGTCGGAGGTCATCGGC 62.571 72.222 4.91 0.00 35.01 5.54
2264 2940 0.038159 GAGAAGGCGATGGTATCCGG 60.038 60.000 0.00 0.00 0.00 5.14
2367 3043 5.295540 GCACTTAGACCTCCAGAAATTCATC 59.704 44.000 0.00 0.00 0.00 2.92
2390 3066 3.120615 GCTCATATTGCGAGATGAAGCAG 60.121 47.826 19.51 8.75 44.72 4.24
2401 3077 2.708325 AGATGAAGCAGGGGGACTAATC 59.292 50.000 0.00 0.00 0.00 1.75
2403 3079 2.562296 TGAAGCAGGGGGACTAATCTT 58.438 47.619 0.00 0.00 0.00 2.40
2404 3080 3.731431 TGAAGCAGGGGGACTAATCTTA 58.269 45.455 0.00 0.00 0.00 2.10
2405 3081 4.307259 TGAAGCAGGGGGACTAATCTTAT 58.693 43.478 0.00 0.00 0.00 1.73
2406 3082 4.348168 TGAAGCAGGGGGACTAATCTTATC 59.652 45.833 0.00 0.00 0.00 1.75
2407 3083 4.220861 AGCAGGGGGACTAATCTTATCT 57.779 45.455 0.00 0.00 0.00 1.98
2408 3084 4.571951 AGCAGGGGGACTAATCTTATCTT 58.428 43.478 0.00 0.00 0.00 2.40
2411 3087 6.442244 AGCAGGGGGACTAATCTTATCTTATC 59.558 42.308 0.00 0.00 0.00 1.75
2412 3088 6.442244 GCAGGGGGACTAATCTTATCTTATCT 59.558 42.308 0.00 0.00 0.00 1.98
2413 3089 7.037945 GCAGGGGGACTAATCTTATCTTATCTT 60.038 40.741 0.00 0.00 0.00 2.40
2414 3090 9.548631 CAGGGGGACTAATCTTATCTTATCTTA 57.451 37.037 0.00 0.00 0.00 2.10
2415 3091 9.549984 AGGGGGACTAATCTTATCTTATCTTAC 57.450 37.037 0.00 0.00 0.00 2.34
2416 3092 8.760735 GGGGGACTAATCTTATCTTATCTTACC 58.239 40.741 0.00 0.00 0.00 2.85
2548 3367 0.522626 TGCATGGCATGAAACGACAG 59.477 50.000 30.69 1.23 31.71 3.51
2603 3672 3.262420 GCGCCTATTGTGATGTATAGGG 58.738 50.000 0.00 2.69 42.37 3.53
2954 4513 6.542370 GGCTACAATCCTAGTAATTGAGCAAA 59.458 38.462 22.76 8.49 38.09 3.68
3081 4666 3.338818 AAAAGCATGTCTGACGTGTTG 57.661 42.857 25.95 12.06 37.43 3.33
3204 4802 8.200120 CCACACTCTTCTAATACATCAATCAGA 58.800 37.037 0.00 0.00 0.00 3.27
3352 8152 7.380333 CGCTAATGGTCGAATACATTACACTTA 59.620 37.037 11.99 0.00 38.24 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.201732 TGTGTCAACTGAAGAAGACGC 58.798 47.619 11.03 11.03 40.78 5.19
3 4 2.485479 GGCCTGTGTCAACTGAAGAAGA 60.485 50.000 0.00 0.00 0.00 2.87
5 6 1.490490 AGGCCTGTGTCAACTGAAGAA 59.510 47.619 3.11 0.00 0.00 2.52
6 7 1.131638 AGGCCTGTGTCAACTGAAGA 58.868 50.000 3.11 0.00 0.00 2.87
7 8 1.605710 CAAGGCCTGTGTCAACTGAAG 59.394 52.381 5.69 0.00 0.00 3.02
8 9 1.679139 CAAGGCCTGTGTCAACTGAA 58.321 50.000 5.69 0.00 0.00 3.02
9 10 0.179020 CCAAGGCCTGTGTCAACTGA 60.179 55.000 5.69 0.00 0.00 3.41
10 11 1.174712 CCCAAGGCCTGTGTCAACTG 61.175 60.000 5.69 0.00 0.00 3.16
11 12 1.151450 CCCAAGGCCTGTGTCAACT 59.849 57.895 5.69 0.00 0.00 3.16
12 13 1.903404 CCCCAAGGCCTGTGTCAAC 60.903 63.158 5.69 0.00 0.00 3.18
13 14 2.067932 CTCCCCAAGGCCTGTGTCAA 62.068 60.000 5.69 0.00 0.00 3.18
14 15 2.449518 TCCCCAAGGCCTGTGTCA 60.450 61.111 5.69 0.00 0.00 3.58
15 16 2.352805 CTCCCCAAGGCCTGTGTC 59.647 66.667 5.69 0.00 0.00 3.67
16 17 3.971702 GCTCCCCAAGGCCTGTGT 61.972 66.667 5.69 0.00 0.00 3.72
17 18 3.970410 TGCTCCCCAAGGCCTGTG 61.970 66.667 5.69 7.02 0.00 3.66
18 19 3.971702 GTGCTCCCCAAGGCCTGT 61.972 66.667 5.69 0.00 0.00 4.00
22 23 2.265467 TAATCCGTGCTCCCCAAGGC 62.265 60.000 0.00 0.00 42.13 4.35
23 24 0.474184 ATAATCCGTGCTCCCCAAGG 59.526 55.000 0.00 0.00 43.54 3.61
24 25 3.007940 TCATATAATCCGTGCTCCCCAAG 59.992 47.826 0.00 0.00 0.00 3.61
25 26 2.976185 TCATATAATCCGTGCTCCCCAA 59.024 45.455 0.00 0.00 0.00 4.12
26 27 2.301870 GTCATATAATCCGTGCTCCCCA 59.698 50.000 0.00 0.00 0.00 4.96
27 28 2.354805 GGTCATATAATCCGTGCTCCCC 60.355 54.545 0.00 0.00 0.00 4.81
28 29 2.567615 AGGTCATATAATCCGTGCTCCC 59.432 50.000 0.00 0.00 0.00 4.30
29 30 3.963428 AGGTCATATAATCCGTGCTCC 57.037 47.619 0.00 0.00 0.00 4.70
30 31 5.406780 CAGAAAGGTCATATAATCCGTGCTC 59.593 44.000 0.00 0.00 0.00 4.26
31 32 5.300752 CAGAAAGGTCATATAATCCGTGCT 58.699 41.667 0.00 0.00 0.00 4.40
32 33 4.083802 GCAGAAAGGTCATATAATCCGTGC 60.084 45.833 0.00 0.00 0.00 5.34
33 34 4.452455 GGCAGAAAGGTCATATAATCCGTG 59.548 45.833 0.00 0.00 0.00 4.94
34 35 4.348168 AGGCAGAAAGGTCATATAATCCGT 59.652 41.667 0.00 0.00 0.00 4.69
35 36 4.899502 AGGCAGAAAGGTCATATAATCCG 58.100 43.478 0.00 0.00 0.00 4.18
36 37 6.207614 GGAAAGGCAGAAAGGTCATATAATCC 59.792 42.308 0.00 0.00 0.00 3.01
37 38 6.207614 GGGAAAGGCAGAAAGGTCATATAATC 59.792 42.308 0.00 0.00 0.00 1.75
38 39 6.071320 GGGAAAGGCAGAAAGGTCATATAAT 58.929 40.000 0.00 0.00 0.00 1.28
39 40 5.044476 TGGGAAAGGCAGAAAGGTCATATAA 60.044 40.000 0.00 0.00 0.00 0.98
40 41 4.476846 TGGGAAAGGCAGAAAGGTCATATA 59.523 41.667 0.00 0.00 0.00 0.86
41 42 3.269381 TGGGAAAGGCAGAAAGGTCATAT 59.731 43.478 0.00 0.00 0.00 1.78
42 43 2.647299 TGGGAAAGGCAGAAAGGTCATA 59.353 45.455 0.00 0.00 0.00 2.15
43 44 1.428912 TGGGAAAGGCAGAAAGGTCAT 59.571 47.619 0.00 0.00 0.00 3.06
44 45 0.850100 TGGGAAAGGCAGAAAGGTCA 59.150 50.000 0.00 0.00 0.00 4.02
45 46 1.995376 TTGGGAAAGGCAGAAAGGTC 58.005 50.000 0.00 0.00 0.00 3.85
46 47 2.250924 CATTGGGAAAGGCAGAAAGGT 58.749 47.619 0.00 0.00 0.00 3.50
47 48 2.250924 ACATTGGGAAAGGCAGAAAGG 58.749 47.619 0.00 0.00 0.00 3.11
48 49 5.047092 ACATAACATTGGGAAAGGCAGAAAG 60.047 40.000 0.00 0.00 0.00 2.62
49 50 4.837860 ACATAACATTGGGAAAGGCAGAAA 59.162 37.500 0.00 0.00 0.00 2.52
50 51 4.415596 ACATAACATTGGGAAAGGCAGAA 58.584 39.130 0.00 0.00 0.00 3.02
51 52 4.046286 ACATAACATTGGGAAAGGCAGA 57.954 40.909 0.00 0.00 0.00 4.26
52 53 4.949856 ACTACATAACATTGGGAAAGGCAG 59.050 41.667 0.00 0.00 0.00 4.85
53 54 4.929479 ACTACATAACATTGGGAAAGGCA 58.071 39.130 0.00 0.00 0.00 4.75
54 55 5.193679 AGACTACATAACATTGGGAAAGGC 58.806 41.667 0.00 0.00 0.00 4.35
55 56 6.318900 GGAAGACTACATAACATTGGGAAAGG 59.681 42.308 0.00 0.00 0.00 3.11
56 57 7.066284 CAGGAAGACTACATAACATTGGGAAAG 59.934 40.741 0.00 0.00 0.00 2.62
57 58 6.884295 CAGGAAGACTACATAACATTGGGAAA 59.116 38.462 0.00 0.00 0.00 3.13
58 59 6.012858 ACAGGAAGACTACATAACATTGGGAA 60.013 38.462 0.00 0.00 0.00 3.97
59 60 5.487488 ACAGGAAGACTACATAACATTGGGA 59.513 40.000 0.00 0.00 0.00 4.37
60 61 5.745227 ACAGGAAGACTACATAACATTGGG 58.255 41.667 0.00 0.00 0.00 4.12
61 62 8.786826 TTTACAGGAAGACTACATAACATTGG 57.213 34.615 0.00 0.00 0.00 3.16
71 72 9.989869 GCAAAATAGAATTTACAGGAAGACTAC 57.010 33.333 0.00 0.00 0.00 2.73
72 73 8.879759 CGCAAAATAGAATTTACAGGAAGACTA 58.120 33.333 0.00 0.00 0.00 2.59
73 74 7.606456 TCGCAAAATAGAATTTACAGGAAGACT 59.394 33.333 0.00 0.00 0.00 3.24
74 75 7.748847 TCGCAAAATAGAATTTACAGGAAGAC 58.251 34.615 0.00 0.00 0.00 3.01
75 76 7.915293 TCGCAAAATAGAATTTACAGGAAGA 57.085 32.000 0.00 0.00 0.00 2.87
76 77 8.964420 TTTCGCAAAATAGAATTTACAGGAAG 57.036 30.769 0.00 0.00 0.00 3.46
77 78 9.751542 TTTTTCGCAAAATAGAATTTACAGGAA 57.248 25.926 0.00 0.00 0.00 3.36
78 79 9.405587 CTTTTTCGCAAAATAGAATTTACAGGA 57.594 29.630 0.00 0.00 31.28 3.86
79 80 9.191995 ACTTTTTCGCAAAATAGAATTTACAGG 57.808 29.630 0.00 0.00 31.28 4.00
81 82 9.959749 AGACTTTTTCGCAAAATAGAATTTACA 57.040 25.926 0.00 0.00 31.28 2.41
84 85 8.978539 GGAAGACTTTTTCGCAAAATAGAATTT 58.021 29.630 0.00 0.00 31.28 1.82
85 86 8.360390 AGGAAGACTTTTTCGCAAAATAGAATT 58.640 29.630 0.00 0.00 31.28 2.17
86 87 7.809806 CAGGAAGACTTTTTCGCAAAATAGAAT 59.190 33.333 0.00 0.00 31.28 2.40
87 88 7.138736 CAGGAAGACTTTTTCGCAAAATAGAA 58.861 34.615 0.00 0.00 31.28 2.10
88 89 6.262273 ACAGGAAGACTTTTTCGCAAAATAGA 59.738 34.615 0.00 0.00 31.28 1.98
89 90 6.438763 ACAGGAAGACTTTTTCGCAAAATAG 58.561 36.000 0.00 0.00 31.28 1.73
90 91 6.385649 ACAGGAAGACTTTTTCGCAAAATA 57.614 33.333 0.00 0.00 31.28 1.40
91 92 5.262588 ACAGGAAGACTTTTTCGCAAAAT 57.737 34.783 0.00 0.00 31.28 1.82
92 93 4.712122 ACAGGAAGACTTTTTCGCAAAA 57.288 36.364 0.00 0.00 0.00 2.44
93 94 5.821516 TTACAGGAAGACTTTTTCGCAAA 57.178 34.783 0.00 0.00 0.00 3.68
94 95 5.763204 AGATTACAGGAAGACTTTTTCGCAA 59.237 36.000 0.00 0.00 0.00 4.85
95 96 5.305585 AGATTACAGGAAGACTTTTTCGCA 58.694 37.500 0.00 0.00 0.00 5.10
96 97 5.864628 AGATTACAGGAAGACTTTTTCGC 57.135 39.130 0.00 0.00 0.00 4.70
97 98 7.798982 GTCAAAGATTACAGGAAGACTTTTTCG 59.201 37.037 0.00 0.00 30.36 3.46
98 99 8.621286 TGTCAAAGATTACAGGAAGACTTTTTC 58.379 33.333 0.00 0.00 30.36 2.29
99 100 8.519799 TGTCAAAGATTACAGGAAGACTTTTT 57.480 30.769 0.00 0.00 30.36 1.94
100 101 8.519799 TTGTCAAAGATTACAGGAAGACTTTT 57.480 30.769 0.00 0.00 30.36 2.27
101 102 8.697507 ATTGTCAAAGATTACAGGAAGACTTT 57.302 30.769 0.00 0.00 31.85 2.66
102 103 8.160106 AGATTGTCAAAGATTACAGGAAGACTT 58.840 33.333 0.00 0.00 0.00 3.01
103 104 7.684529 AGATTGTCAAAGATTACAGGAAGACT 58.315 34.615 0.00 0.00 0.00 3.24
104 105 7.913674 AGATTGTCAAAGATTACAGGAAGAC 57.086 36.000 0.00 0.00 0.00 3.01
117 118 9.956720 ACAAGACATCTTTTTAGATTGTCAAAG 57.043 29.630 14.34 0.00 33.11 2.77
120 121 9.734620 CAAACAAGACATCTTTTTAGATTGTCA 57.265 29.630 14.34 0.00 33.11 3.58
121 122 9.950680 TCAAACAAGACATCTTTTTAGATTGTC 57.049 29.630 0.00 0.00 33.11 3.18
122 123 9.736023 GTCAAACAAGACATCTTTTTAGATTGT 57.264 29.630 0.00 0.00 38.40 2.71
123 124 9.185192 GGTCAAACAAGACATCTTTTTAGATTG 57.815 33.333 0.00 0.00 40.29 2.67
124 125 8.912988 TGGTCAAACAAGACATCTTTTTAGATT 58.087 29.630 0.00 0.00 40.29 2.40
125 126 8.463930 TGGTCAAACAAGACATCTTTTTAGAT 57.536 30.769 0.00 0.00 40.29 1.98
126 127 7.873719 TGGTCAAACAAGACATCTTTTTAGA 57.126 32.000 0.00 0.00 40.29 2.10
127 128 8.925161 TTTGGTCAAACAAGACATCTTTTTAG 57.075 30.769 0.00 0.00 40.29 1.85
128 129 8.527810 ACTTTGGTCAAACAAGACATCTTTTTA 58.472 29.630 0.00 0.00 40.29 1.52
129 130 7.331687 CACTTTGGTCAAACAAGACATCTTTTT 59.668 33.333 0.00 0.00 40.29 1.94
130 131 6.813152 CACTTTGGTCAAACAAGACATCTTTT 59.187 34.615 0.00 0.00 40.29 2.27
131 132 6.071391 ACACTTTGGTCAAACAAGACATCTTT 60.071 34.615 0.00 0.00 40.29 2.52
132 133 5.418840 ACACTTTGGTCAAACAAGACATCTT 59.581 36.000 0.00 0.00 40.29 2.40
133 134 4.949856 ACACTTTGGTCAAACAAGACATCT 59.050 37.500 0.00 0.00 40.29 2.90
134 135 5.248870 ACACTTTGGTCAAACAAGACATC 57.751 39.130 0.00 0.00 40.29 3.06
135 136 5.184864 TGAACACTTTGGTCAAACAAGACAT 59.815 36.000 0.00 0.00 41.82 3.06
136 137 4.520874 TGAACACTTTGGTCAAACAAGACA 59.479 37.500 0.00 0.00 41.82 3.41
137 138 4.857037 GTGAACACTTTGGTCAAACAAGAC 59.143 41.667 0.00 0.00 46.88 3.01
138 139 4.520874 TGTGAACACTTTGGTCAAACAAGA 59.479 37.500 6.51 0.00 46.88 3.02
139 140 4.804108 TGTGAACACTTTGGTCAAACAAG 58.196 39.130 6.51 0.00 46.88 3.16
140 141 4.855715 TGTGAACACTTTGGTCAAACAA 57.144 36.364 6.51 0.00 46.88 2.83
141 142 5.167121 CAATGTGAACACTTTGGTCAAACA 58.833 37.500 19.06 0.00 46.88 2.83
142 143 4.032786 GCAATGTGAACACTTTGGTCAAAC 59.967 41.667 24.24 10.79 46.88 2.93
143 144 4.180057 GCAATGTGAACACTTTGGTCAAA 58.820 39.130 24.24 0.00 46.88 2.69
144 145 3.194329 TGCAATGTGAACACTTTGGTCAA 59.806 39.130 24.24 0.00 46.88 3.18
145 146 2.757314 TGCAATGTGAACACTTTGGTCA 59.243 40.909 24.24 16.36 42.67 4.02
146 147 3.115554 GTGCAATGTGAACACTTTGGTC 58.884 45.455 24.24 14.74 42.92 4.02
147 148 2.479389 CGTGCAATGTGAACACTTTGGT 60.479 45.455 24.24 0.00 42.92 3.67
148 149 2.118683 CGTGCAATGTGAACACTTTGG 58.881 47.619 24.24 11.77 42.92 3.28
149 150 3.063670 TCGTGCAATGTGAACACTTTG 57.936 42.857 21.14 21.14 44.46 2.77
150 151 3.773860 TTCGTGCAATGTGAACACTTT 57.226 38.095 6.51 3.72 32.07 2.66
151 152 3.988379 ATTCGTGCAATGTGAACACTT 57.012 38.095 6.51 0.00 32.07 3.16
152 153 3.314913 TCAATTCGTGCAATGTGAACACT 59.685 39.130 6.51 0.00 32.07 3.55
153 154 3.421888 GTCAATTCGTGCAATGTGAACAC 59.578 43.478 0.00 0.00 0.00 3.32
154 155 3.065925 TGTCAATTCGTGCAATGTGAACA 59.934 39.130 0.00 0.00 0.00 3.18
155 156 3.626977 TGTCAATTCGTGCAATGTGAAC 58.373 40.909 0.00 0.00 0.00 3.18
156 157 3.978718 TGTCAATTCGTGCAATGTGAA 57.021 38.095 0.00 0.00 0.00 3.18
157 158 5.448904 CCATATGTCAATTCGTGCAATGTGA 60.449 40.000 1.24 0.00 0.00 3.58
158 159 4.736307 CCATATGTCAATTCGTGCAATGTG 59.264 41.667 1.24 0.00 0.00 3.21
159 160 4.398988 ACCATATGTCAATTCGTGCAATGT 59.601 37.500 1.24 0.00 0.00 2.71
160 161 4.736307 CACCATATGTCAATTCGTGCAATG 59.264 41.667 1.24 0.00 0.00 2.82
161 162 4.734402 GCACCATATGTCAATTCGTGCAAT 60.734 41.667 19.62 0.00 43.46 3.56
162 163 3.427368 GCACCATATGTCAATTCGTGCAA 60.427 43.478 19.62 0.00 43.46 4.08
163 164 2.097304 GCACCATATGTCAATTCGTGCA 59.903 45.455 19.62 0.00 43.46 4.57
164 165 2.355756 AGCACCATATGTCAATTCGTGC 59.644 45.455 17.88 17.88 44.14 5.34
165 166 3.002656 GGAGCACCATATGTCAATTCGTG 59.997 47.826 1.24 2.10 35.97 4.35
166 167 3.206150 GGAGCACCATATGTCAATTCGT 58.794 45.455 1.24 0.00 35.97 3.85
167 168 3.205338 TGGAGCACCATATGTCAATTCG 58.795 45.455 0.00 0.00 41.77 3.34
168 169 5.581126 TTTGGAGCACCATATGTCAATTC 57.419 39.130 2.87 0.00 46.34 2.17
169 170 5.999205 TTTTGGAGCACCATATGTCAATT 57.001 34.783 2.87 0.00 46.34 2.32
170 171 5.622007 CGTTTTTGGAGCACCATATGTCAAT 60.622 40.000 2.87 0.00 46.34 2.57
171 172 4.320861 CGTTTTTGGAGCACCATATGTCAA 60.321 41.667 2.87 0.00 46.34 3.18
172 173 3.190327 CGTTTTTGGAGCACCATATGTCA 59.810 43.478 2.87 0.00 46.34 3.58
173 174 3.427503 CCGTTTTTGGAGCACCATATGTC 60.428 47.826 2.87 0.00 46.34 3.06
174 175 2.491693 CCGTTTTTGGAGCACCATATGT 59.508 45.455 2.87 0.00 46.34 2.29
175 176 2.752354 TCCGTTTTTGGAGCACCATATG 59.248 45.455 2.87 0.00 46.34 1.78
176 177 2.752903 GTCCGTTTTTGGAGCACCATAT 59.247 45.455 2.87 0.00 46.34 1.78
177 178 2.156098 GTCCGTTTTTGGAGCACCATA 58.844 47.619 2.87 0.00 46.34 2.74
178 179 0.958822 GTCCGTTTTTGGAGCACCAT 59.041 50.000 2.87 0.00 46.34 3.55
179 180 0.394488 TGTCCGTTTTTGGAGCACCA 60.394 50.000 0.00 0.00 45.34 4.17
180 181 0.958822 ATGTCCGTTTTTGGAGCACC 59.041 50.000 0.00 0.00 39.14 5.01
181 182 3.907894 TTATGTCCGTTTTTGGAGCAC 57.092 42.857 0.00 0.00 39.14 4.40
182 183 4.920640 TTTTATGTCCGTTTTTGGAGCA 57.079 36.364 0.00 0.00 39.14 4.26
183 184 5.694458 ACAATTTTATGTCCGTTTTTGGAGC 59.306 36.000 0.00 0.00 39.14 4.70
184 185 8.980143 ATACAATTTTATGTCCGTTTTTGGAG 57.020 30.769 0.00 0.00 39.14 3.86
185 186 9.765795 AAATACAATTTTATGTCCGTTTTTGGA 57.234 25.926 0.00 0.00 34.75 3.53
189 190 8.907685 CGTGAAATACAATTTTATGTCCGTTTT 58.092 29.630 0.33 0.00 34.75 2.43
190 191 7.061326 GCGTGAAATACAATTTTATGTCCGTTT 59.939 33.333 11.19 0.00 34.75 3.60
191 192 6.525280 GCGTGAAATACAATTTTATGTCCGTT 59.475 34.615 11.19 0.00 34.75 4.44
192 193 6.025280 GCGTGAAATACAATTTTATGTCCGT 58.975 36.000 11.19 0.00 34.75 4.69
193 194 6.255215 AGCGTGAAATACAATTTTATGTCCG 58.745 36.000 0.33 4.60 34.75 4.79
194 195 7.642586 GGTAGCGTGAAATACAATTTTATGTCC 59.357 37.037 0.33 0.00 34.75 4.02
195 196 8.178964 TGGTAGCGTGAAATACAATTTTATGTC 58.821 33.333 0.00 0.00 34.75 3.06
196 197 8.046294 TGGTAGCGTGAAATACAATTTTATGT 57.954 30.769 0.00 0.00 37.32 2.29
197 198 9.169468 GATGGTAGCGTGAAATACAATTTTATG 57.831 33.333 0.00 0.00 0.00 1.90
198 199 8.898761 TGATGGTAGCGTGAAATACAATTTTAT 58.101 29.630 0.00 0.00 0.00 1.40
199 200 8.270080 TGATGGTAGCGTGAAATACAATTTTA 57.730 30.769 0.00 0.00 0.00 1.52
200 201 7.151999 TGATGGTAGCGTGAAATACAATTTT 57.848 32.000 0.00 0.00 0.00 1.82
201 202 6.751514 TGATGGTAGCGTGAAATACAATTT 57.248 33.333 0.00 0.00 0.00 1.82
202 203 6.942532 ATGATGGTAGCGTGAAATACAATT 57.057 33.333 0.00 0.00 0.00 2.32
203 204 7.441836 TCTATGATGGTAGCGTGAAATACAAT 58.558 34.615 0.00 0.00 0.00 2.71
204 205 6.811954 TCTATGATGGTAGCGTGAAATACAA 58.188 36.000 0.00 0.00 0.00 2.41
205 206 6.399639 TCTATGATGGTAGCGTGAAATACA 57.600 37.500 0.00 0.00 0.00 2.29
206 207 7.815068 AGAATCTATGATGGTAGCGTGAAATAC 59.185 37.037 0.00 0.00 0.00 1.89
207 208 7.896811 AGAATCTATGATGGTAGCGTGAAATA 58.103 34.615 0.00 0.00 0.00 1.40
208 209 6.763355 AGAATCTATGATGGTAGCGTGAAAT 58.237 36.000 0.00 0.00 0.00 2.17
209 210 6.161855 AGAATCTATGATGGTAGCGTGAAA 57.838 37.500 0.00 0.00 0.00 2.69
210 211 5.279006 GGAGAATCTATGATGGTAGCGTGAA 60.279 44.000 0.00 0.00 33.73 3.18
211 212 4.218635 GGAGAATCTATGATGGTAGCGTGA 59.781 45.833 0.00 0.00 33.73 4.35
212 213 4.489810 GGAGAATCTATGATGGTAGCGTG 58.510 47.826 0.00 0.00 33.73 5.34
213 214 3.191581 CGGAGAATCTATGATGGTAGCGT 59.808 47.826 0.00 0.00 33.73 5.07
214 215 3.428180 CCGGAGAATCTATGATGGTAGCG 60.428 52.174 0.00 0.00 33.73 4.26
215 216 3.511934 ACCGGAGAATCTATGATGGTAGC 59.488 47.826 9.46 0.00 33.73 3.58
216 217 5.013547 AGACCGGAGAATCTATGATGGTAG 58.986 45.833 9.46 0.00 33.73 3.18
217 218 4.999310 AGACCGGAGAATCTATGATGGTA 58.001 43.478 9.46 0.00 33.73 3.25
218 219 3.850752 AGACCGGAGAATCTATGATGGT 58.149 45.455 9.46 0.00 33.73 3.55
219 220 4.881019 AAGACCGGAGAATCTATGATGG 57.119 45.455 9.46 0.00 33.73 3.51
220 221 7.087639 GTCTAAAGACCGGAGAATCTATGATG 58.912 42.308 9.46 0.00 39.07 3.07
221 222 6.778069 TGTCTAAAGACCGGAGAATCTATGAT 59.222 38.462 9.46 0.00 44.15 2.45
222 223 6.127101 TGTCTAAAGACCGGAGAATCTATGA 58.873 40.000 9.46 0.00 44.15 2.15
223 224 6.392625 TGTCTAAAGACCGGAGAATCTATG 57.607 41.667 9.46 0.00 44.15 2.23
224 225 7.522399 CGAATGTCTAAAGACCGGAGAATCTAT 60.522 40.741 9.46 0.00 44.15 1.98
225 226 6.238676 CGAATGTCTAAAGACCGGAGAATCTA 60.239 42.308 9.46 0.00 44.15 1.98
226 227 5.450688 CGAATGTCTAAAGACCGGAGAATCT 60.451 44.000 9.46 0.00 44.15 2.40
227 228 4.740695 CGAATGTCTAAAGACCGGAGAATC 59.259 45.833 9.46 0.00 44.15 2.52
228 229 4.159879 ACGAATGTCTAAAGACCGGAGAAT 59.840 41.667 9.46 0.00 44.15 2.40
229 230 3.508793 ACGAATGTCTAAAGACCGGAGAA 59.491 43.478 9.46 0.00 44.15 2.87
230 231 3.087031 ACGAATGTCTAAAGACCGGAGA 58.913 45.455 9.46 0.00 44.15 3.71
231 232 3.179830 CACGAATGTCTAAAGACCGGAG 58.820 50.000 9.46 0.00 44.15 4.63
232 233 2.673043 GCACGAATGTCTAAAGACCGGA 60.673 50.000 9.46 0.00 44.15 5.14
233 234 1.659098 GCACGAATGTCTAAAGACCGG 59.341 52.381 0.00 0.00 44.15 5.28
234 235 1.320555 CGCACGAATGTCTAAAGACCG 59.679 52.381 7.63 6.68 44.15 4.79
235 236 2.334838 ACGCACGAATGTCTAAAGACC 58.665 47.619 7.63 0.00 44.15 3.85
236 237 5.118203 ACTTAACGCACGAATGTCTAAAGAC 59.882 40.000 3.08 3.08 44.97 3.01
237 238 5.224888 ACTTAACGCACGAATGTCTAAAGA 58.775 37.500 0.00 0.00 0.00 2.52
238 239 5.511088 ACTTAACGCACGAATGTCTAAAG 57.489 39.130 0.00 0.00 0.00 1.85
239 240 5.462729 TGAACTTAACGCACGAATGTCTAAA 59.537 36.000 0.00 0.00 0.00 1.85
240 241 4.983538 TGAACTTAACGCACGAATGTCTAA 59.016 37.500 0.00 0.00 0.00 2.10
241 242 4.548494 TGAACTTAACGCACGAATGTCTA 58.452 39.130 0.00 0.00 0.00 2.59
242 243 3.386486 TGAACTTAACGCACGAATGTCT 58.614 40.909 0.00 0.00 0.00 3.41
243 244 3.183775 ACTGAACTTAACGCACGAATGTC 59.816 43.478 0.00 0.00 0.00 3.06
244 245 3.128349 ACTGAACTTAACGCACGAATGT 58.872 40.909 0.00 0.00 0.00 2.71
245 246 3.718036 CGACTGAACTTAACGCACGAATG 60.718 47.826 0.00 0.00 0.00 2.67
246 247 2.407361 CGACTGAACTTAACGCACGAAT 59.593 45.455 0.00 0.00 0.00 3.34
247 248 1.782569 CGACTGAACTTAACGCACGAA 59.217 47.619 0.00 0.00 0.00 3.85
248 249 1.401530 CGACTGAACTTAACGCACGA 58.598 50.000 0.00 0.00 0.00 4.35
249 250 0.433492 CCGACTGAACTTAACGCACG 59.567 55.000 0.00 0.00 0.00 5.34
250 251 1.191647 CACCGACTGAACTTAACGCAC 59.808 52.381 0.00 0.00 0.00 5.34
251 252 1.067364 TCACCGACTGAACTTAACGCA 59.933 47.619 0.00 0.00 0.00 5.24
252 253 1.719780 CTCACCGACTGAACTTAACGC 59.280 52.381 0.00 0.00 0.00 4.84
253 254 2.325761 CCTCACCGACTGAACTTAACG 58.674 52.381 0.00 0.00 0.00 3.18
254 255 2.036862 ACCCTCACCGACTGAACTTAAC 59.963 50.000 0.00 0.00 0.00 2.01
255 256 2.036733 CACCCTCACCGACTGAACTTAA 59.963 50.000 0.00 0.00 0.00 1.85
256 257 1.616865 CACCCTCACCGACTGAACTTA 59.383 52.381 0.00 0.00 0.00 2.24
257 258 0.393077 CACCCTCACCGACTGAACTT 59.607 55.000 0.00 0.00 0.00 2.66
258 259 2.050269 CACCCTCACCGACTGAACT 58.950 57.895 0.00 0.00 0.00 3.01
259 260 1.668151 GCACCCTCACCGACTGAAC 60.668 63.158 0.00 0.00 0.00 3.18
260 261 2.741092 GCACCCTCACCGACTGAA 59.259 61.111 0.00 0.00 0.00 3.02
261 262 3.680786 CGCACCCTCACCGACTGA 61.681 66.667 0.00 0.00 0.00 3.41
262 263 2.632544 TACGCACCCTCACCGACTG 61.633 63.158 0.00 0.00 0.00 3.51
263 264 2.282674 TACGCACCCTCACCGACT 60.283 61.111 0.00 0.00 0.00 4.18
264 265 2.126189 GTACGCACCCTCACCGAC 60.126 66.667 0.00 0.00 0.00 4.79
265 266 3.376078 GGTACGCACCCTCACCGA 61.376 66.667 0.00 0.00 39.11 4.69
277 278 4.842091 CGTCGGCGAAGGGGTACG 62.842 72.222 12.92 5.81 41.33 3.67
278 279 3.443045 TCGTCGGCGAAGGGGTAC 61.443 66.667 21.95 2.71 44.92 3.34
286 287 3.443045 GGTACCCTTCGTCGGCGA 61.443 66.667 8.66 8.66 46.36 5.54
287 288 1.656818 TAAGGTACCCTTCGTCGGCG 61.657 60.000 8.74 1.15 43.57 6.46
288 289 0.101939 CTAAGGTACCCTTCGTCGGC 59.898 60.000 8.74 0.00 43.57 5.54
289 290 1.467920 ACTAAGGTACCCTTCGTCGG 58.532 55.000 8.74 0.00 43.57 4.79
290 291 3.629398 ACATACTAAGGTACCCTTCGTCG 59.371 47.826 8.74 0.00 43.57 5.12
291 292 5.586339 GAACATACTAAGGTACCCTTCGTC 58.414 45.833 8.74 0.00 43.57 4.20
292 293 4.096984 CGAACATACTAAGGTACCCTTCGT 59.903 45.833 8.74 7.30 43.57 3.85
293 294 4.336433 TCGAACATACTAAGGTACCCTTCG 59.664 45.833 8.74 8.41 43.57 3.79
294 295 5.591877 TCTCGAACATACTAAGGTACCCTTC 59.408 44.000 8.74 0.00 43.57 3.46
295 296 5.513233 TCTCGAACATACTAAGGTACCCTT 58.487 41.667 8.74 5.08 46.63 3.95
303 304 5.299531 TGTCCCTCATCTCGAACATACTAAG 59.700 44.000 0.00 0.00 0.00 2.18
310 311 1.482182 CCATGTCCCTCATCTCGAACA 59.518 52.381 0.00 0.00 34.09 3.18
311 312 1.757118 TCCATGTCCCTCATCTCGAAC 59.243 52.381 0.00 0.00 34.09 3.95
321 322 1.280421 GAGCAGAAACTCCATGTCCCT 59.720 52.381 0.00 0.00 0.00 4.20
350 351 1.739067 ACTGTTCATAAGGAAGCCGC 58.261 50.000 0.00 0.00 35.82 6.53
351 352 5.873179 TTTTACTGTTCATAAGGAAGCCG 57.127 39.130 0.00 0.00 35.82 5.52
434 486 6.561737 TCTTCACCAAAATTTGCACGTATA 57.438 33.333 0.00 0.00 0.00 1.47
439 491 6.175712 TGTTTTCTTCACCAAAATTTGCAC 57.824 33.333 0.00 0.00 0.00 4.57
441 493 6.912051 GGAATGTTTTCTTCACCAAAATTTGC 59.088 34.615 0.00 0.00 32.16 3.68
444 496 9.898152 TTTAGGAATGTTTTCTTCACCAAAATT 57.102 25.926 0.00 0.00 32.16 1.82
449 501 6.267471 AGCATTTAGGAATGTTTTCTTCACCA 59.733 34.615 1.63 0.00 43.67 4.17
460 512 2.418368 TCCGCAGCATTTAGGAATGT 57.582 45.000 0.00 0.00 43.67 2.71
461 513 3.781079 TTTCCGCAGCATTTAGGAATG 57.219 42.857 0.08 0.00 44.42 2.67
510 564 8.569641 ACAAACATTGATTTGCAATATGCTTTT 58.430 25.926 0.00 0.00 45.23 2.27
511 565 8.101654 ACAAACATTGATTTGCAATATGCTTT 57.898 26.923 0.00 3.89 45.23 3.51
512 566 7.675962 ACAAACATTGATTTGCAATATGCTT 57.324 28.000 0.00 0.00 45.23 3.91
513 567 7.523219 CAACAAACATTGATTTGCAATATGCT 58.477 30.769 0.00 0.00 45.23 3.79
514 568 6.249682 GCAACAAACATTGATTTGCAATATGC 59.750 34.615 0.00 0.00 45.23 3.14
515 569 6.743627 GGCAACAAACATTGATTTGCAATATG 59.256 34.615 15.67 5.00 45.23 1.78
516 570 6.402334 CGGCAACAAACATTGATTTGCAATAT 60.402 34.615 15.67 0.00 45.23 1.28
517 571 5.107182 CGGCAACAAACATTGATTTGCAATA 60.107 36.000 15.67 0.00 45.23 1.90
519 573 3.002042 CGGCAACAAACATTGATTTGCAA 59.998 39.130 15.67 0.00 41.64 4.08
520 574 2.543012 CGGCAACAAACATTGATTTGCA 59.457 40.909 15.67 0.00 41.64 4.08
521 575 2.799412 TCGGCAACAAACATTGATTTGC 59.201 40.909 8.90 8.90 42.29 3.68
522 576 5.401033 TTTCGGCAACAAACATTGATTTG 57.599 34.783 0.00 8.97 43.81 2.32
563 617 5.180680 ACGGGAAGCAATAGTAGAAACAAAC 59.819 40.000 0.00 0.00 0.00 2.93
571 625 7.316544 ACAATAAAACGGGAAGCAATAGTAG 57.683 36.000 0.00 0.00 0.00 2.57
580 645 5.394773 CCCCCATTAACAATAAAACGGGAAG 60.395 44.000 0.00 0.00 33.77 3.46
617 682 2.139118 GAAAGTGTCTGTCTGCTCACC 58.861 52.381 0.00 0.00 0.00 4.02
622 687 0.880278 TGGCGAAAGTGTCTGTCTGC 60.880 55.000 0.00 0.00 0.00 4.26
623 688 1.143305 CTGGCGAAAGTGTCTGTCTG 58.857 55.000 0.00 0.00 0.00 3.51
624 689 1.040646 TCTGGCGAAAGTGTCTGTCT 58.959 50.000 0.00 0.00 0.00 3.41
625 690 1.140816 GTCTGGCGAAAGTGTCTGTC 58.859 55.000 0.00 0.00 0.00 3.51
626 691 0.597637 CGTCTGGCGAAAGTGTCTGT 60.598 55.000 0.00 0.00 44.77 3.41
627 692 0.597637 ACGTCTGGCGAAAGTGTCTG 60.598 55.000 9.35 0.00 44.77 3.51
628 693 0.597637 CACGTCTGGCGAAAGTGTCT 60.598 55.000 9.35 0.00 44.77 3.41
629 694 1.557443 CCACGTCTGGCGAAAGTGTC 61.557 60.000 9.35 0.00 44.77 3.67
630 695 1.594293 CCACGTCTGGCGAAAGTGT 60.594 57.895 9.35 0.00 44.77 3.55
631 696 0.319211 TACCACGTCTGGCGAAAGTG 60.319 55.000 9.35 0.00 42.08 3.16
632 697 0.390124 TTACCACGTCTGGCGAAAGT 59.610 50.000 9.35 4.94 42.08 2.66
633 698 1.504359 TTTACCACGTCTGGCGAAAG 58.496 50.000 9.35 0.00 42.08 2.62
634 699 2.172851 ATTTACCACGTCTGGCGAAA 57.827 45.000 9.35 0.00 42.08 3.46
635 700 2.172851 AATTTACCACGTCTGGCGAA 57.827 45.000 9.35 0.00 42.08 4.70
636 701 2.070783 GAAATTTACCACGTCTGGCGA 58.929 47.619 9.35 0.00 42.08 5.54
637 702 2.073816 AGAAATTTACCACGTCTGGCG 58.926 47.619 0.00 0.00 42.08 5.69
638 703 3.500680 TCAAGAAATTTACCACGTCTGGC 59.499 43.478 0.00 0.00 42.08 4.85
639 704 4.994852 TCTCAAGAAATTTACCACGTCTGG 59.005 41.667 0.00 0.00 44.26 3.86
640 705 6.368791 TCATCTCAAGAAATTTACCACGTCTG 59.631 38.462 0.00 0.00 0.00 3.51
641 706 6.464222 TCATCTCAAGAAATTTACCACGTCT 58.536 36.000 0.00 0.00 0.00 4.18
642 707 6.721571 TCATCTCAAGAAATTTACCACGTC 57.278 37.500 0.00 0.00 0.00 4.34
643 708 6.878923 TCATCATCTCAAGAAATTTACCACGT 59.121 34.615 0.00 0.00 0.00 4.49
644 709 7.307493 TCATCATCTCAAGAAATTTACCACG 57.693 36.000 0.00 0.00 0.00 4.94
645 710 8.734386 ACTTCATCATCTCAAGAAATTTACCAC 58.266 33.333 0.00 0.00 0.00 4.16
646 711 8.733458 CACTTCATCATCTCAAGAAATTTACCA 58.267 33.333 0.00 0.00 0.00 3.25
647 712 8.950210 TCACTTCATCATCTCAAGAAATTTACC 58.050 33.333 0.00 0.00 0.00 2.85
648 713 9.766277 GTCACTTCATCATCTCAAGAAATTTAC 57.234 33.333 0.00 0.00 0.00 2.01
649 714 9.506018 TGTCACTTCATCATCTCAAGAAATTTA 57.494 29.630 0.00 0.00 0.00 1.40
650 715 8.400184 TGTCACTTCATCATCTCAAGAAATTT 57.600 30.769 0.00 0.00 0.00 1.82
651 716 7.991084 TGTCACTTCATCATCTCAAGAAATT 57.009 32.000 0.00 0.00 0.00 1.82
652 717 7.011202 CGATGTCACTTCATCATCTCAAGAAAT 59.989 37.037 7.32 0.00 42.82 2.17
653 718 6.312180 CGATGTCACTTCATCATCTCAAGAAA 59.688 38.462 7.32 0.00 42.82 2.52
654 719 5.809051 CGATGTCACTTCATCATCTCAAGAA 59.191 40.000 7.32 0.00 42.82 2.52
655 720 5.346522 CGATGTCACTTCATCATCTCAAGA 58.653 41.667 7.32 0.00 42.82 3.02
656 721 4.507021 CCGATGTCACTTCATCATCTCAAG 59.493 45.833 7.32 0.00 42.82 3.02
657 722 4.160252 TCCGATGTCACTTCATCATCTCAA 59.840 41.667 7.32 0.00 42.82 3.02
658 723 3.701040 TCCGATGTCACTTCATCATCTCA 59.299 43.478 7.32 0.00 42.82 3.27
659 724 4.313277 TCCGATGTCACTTCATCATCTC 57.687 45.455 7.32 0.00 42.82 2.75
660 725 4.558296 CGATCCGATGTCACTTCATCATCT 60.558 45.833 7.32 0.00 42.82 2.90
661 726 3.672397 CGATCCGATGTCACTTCATCATC 59.328 47.826 7.32 0.00 42.82 2.92
662 727 3.646946 CGATCCGATGTCACTTCATCAT 58.353 45.455 7.32 0.00 42.82 2.45
663 728 2.799562 GCGATCCGATGTCACTTCATCA 60.800 50.000 7.32 0.00 42.82 3.07
664 729 1.789464 GCGATCCGATGTCACTTCATC 59.211 52.381 0.00 0.00 40.29 2.92
665 730 1.858091 GCGATCCGATGTCACTTCAT 58.142 50.000 0.00 0.00 0.00 2.57
666 731 0.525455 CGCGATCCGATGTCACTTCA 60.525 55.000 0.00 0.00 40.02 3.02
667 732 1.812214 GCGCGATCCGATGTCACTTC 61.812 60.000 12.10 0.00 40.02 3.01
668 733 1.878522 GCGCGATCCGATGTCACTT 60.879 57.895 12.10 0.00 40.02 3.16
669 734 2.278857 GCGCGATCCGATGTCACT 60.279 61.111 12.10 0.00 40.02 3.41
670 735 2.582226 TGCGCGATCCGATGTCAC 60.582 61.111 12.10 0.00 40.02 3.67
671 736 2.582226 GTGCGCGATCCGATGTCA 60.582 61.111 12.10 0.00 40.02 3.58
672 737 3.682315 CGTGCGCGATCCGATGTC 61.682 66.667 16.08 0.00 41.33 3.06
674 739 4.923710 TCCGTGCGCGATCCGATG 62.924 66.667 23.45 1.88 41.33 3.84
675 740 4.925576 GTCCGTGCGCGATCCGAT 62.926 66.667 23.45 0.00 41.33 4.18
678 743 4.891727 ATGGTCCGTGCGCGATCC 62.892 66.667 23.45 21.53 41.33 3.36
679 744 2.871427 GAATGGTCCGTGCGCGATC 61.871 63.158 23.45 13.08 41.33 3.69
680 745 2.890474 GAATGGTCCGTGCGCGAT 60.890 61.111 23.45 3.05 41.33 4.58
683 748 0.944311 ATATCGAATGGTCCGTGCGC 60.944 55.000 6.59 0.00 0.00 6.09
684 749 1.497991 AATATCGAATGGTCCGTGCG 58.502 50.000 4.93 4.93 0.00 5.34
685 750 3.521524 GAAATATCGAATGGTCCGTGC 57.478 47.619 0.00 0.00 0.00 5.34
698 763 6.198591 GCAACCACTACTACTGTCGAAATATC 59.801 42.308 0.00 0.00 0.00 1.63
699 764 6.040878 GCAACCACTACTACTGTCGAAATAT 58.959 40.000 0.00 0.00 0.00 1.28
700 765 5.184479 AGCAACCACTACTACTGTCGAAATA 59.816 40.000 0.00 0.00 0.00 1.40
701 766 4.021368 AGCAACCACTACTACTGTCGAAAT 60.021 41.667 0.00 0.00 0.00 2.17
702 767 3.319972 AGCAACCACTACTACTGTCGAAA 59.680 43.478 0.00 0.00 0.00 3.46
703 768 2.889045 AGCAACCACTACTACTGTCGAA 59.111 45.455 0.00 0.00 0.00 3.71
741 806 0.392998 GATGGTGCCGGTCTGTTGAT 60.393 55.000 1.90 0.00 0.00 2.57
760 825 0.526662 ACTAGTCGCCGTGAGAAAGG 59.473 55.000 0.00 0.00 0.00 3.11
792 1454 3.775316 AGATCTTTCCCTTCTTTCCGCTA 59.225 43.478 0.00 0.00 0.00 4.26
793 1455 2.573915 AGATCTTTCCCTTCTTTCCGCT 59.426 45.455 0.00 0.00 0.00 5.52
795 1457 3.619038 CGAAGATCTTTCCCTTCTTTCCG 59.381 47.826 9.87 0.00 37.29 4.30
796 1458 3.942115 CCGAAGATCTTTCCCTTCTTTCC 59.058 47.826 9.87 0.00 37.29 3.13
797 1459 4.833390 TCCGAAGATCTTTCCCTTCTTTC 58.167 43.478 9.87 0.00 37.29 2.62
798 1460 4.287326 ACTCCGAAGATCTTTCCCTTCTTT 59.713 41.667 9.87 0.00 37.29 2.52
799 1461 3.841255 ACTCCGAAGATCTTTCCCTTCTT 59.159 43.478 9.87 0.00 37.29 2.52
801 1463 3.735514 CGACTCCGAAGATCTTTCCCTTC 60.736 52.174 9.87 3.68 38.22 3.46
802 1464 2.166664 CGACTCCGAAGATCTTTCCCTT 59.833 50.000 9.87 0.00 38.22 3.95
803 1465 1.751924 CGACTCCGAAGATCTTTCCCT 59.248 52.381 9.87 0.00 38.22 4.20
804 1466 1.803252 GCGACTCCGAAGATCTTTCCC 60.803 57.143 9.87 0.00 38.22 3.97
824 1486 1.136252 CGACTGCGAATGTTCCAACTG 60.136 52.381 0.00 0.00 40.82 3.16
878 1540 8.858003 AGAAATATGTACACTACTTCATGTCG 57.142 34.615 0.00 0.00 0.00 4.35
886 1548 6.156256 TGCCCTGAAGAAATATGTACACTACT 59.844 38.462 0.00 0.00 0.00 2.57
887 1549 6.346096 TGCCCTGAAGAAATATGTACACTAC 58.654 40.000 0.00 0.00 0.00 2.73
888 1550 6.408092 CCTGCCCTGAAGAAATATGTACACTA 60.408 42.308 0.00 0.00 0.00 2.74
919 1581 4.778143 ATTGGAGCACGACCCCGC 62.778 66.667 0.00 0.00 39.95 6.13
921 1583 2.511600 CGATTGGAGCACGACCCC 60.512 66.667 0.00 0.00 0.00 4.95
922 1584 3.195698 GCGATTGGAGCACGACCC 61.196 66.667 0.00 0.00 34.19 4.46
923 1585 3.554692 CGCGATTGGAGCACGACC 61.555 66.667 0.00 0.00 34.19 4.79
924 1586 2.506217 TCGCGATTGGAGCACGAC 60.506 61.111 3.71 0.00 34.19 4.34
925 1587 2.202610 CTCGCGATTGGAGCACGA 60.203 61.111 10.36 0.00 34.19 4.35
960 1622 1.140407 GGATCGAGTACACAGCGCAC 61.140 60.000 11.47 0.00 0.00 5.34
979 1641 5.996513 CCATGGAGATTCCTAGATTGAGTTG 59.003 44.000 5.56 0.00 37.46 3.16
1065 1727 4.166888 GCGAGATGCAGGGCCAGA 62.167 66.667 6.18 0.00 45.45 3.86
1927 2603 2.591715 GTGTTGGCCGTCAGTGCT 60.592 61.111 0.00 0.00 0.00 4.40
1941 2617 2.534019 CGACAGCAACTTGGCGTGT 61.534 57.895 0.00 0.00 44.43 4.49
1960 2636 2.560981 CCTCGGTTTGCCTGGTAAATTT 59.439 45.455 13.09 0.00 0.00 1.82
2209 2885 3.991051 CTCCGACGGCACCACTGT 61.991 66.667 9.66 0.00 42.04 3.55
2235 2911 3.008534 ATCGCCTTCTCGATGACCTCG 62.009 57.143 0.00 0.00 46.18 4.63
2264 2940 1.061570 CTCGCTTGCAATCCTTCGC 59.938 57.895 0.00 0.00 0.00 4.70
2379 3055 1.794714 TAGTCCCCCTGCTTCATCTC 58.205 55.000 0.00 0.00 0.00 2.75
2390 3066 8.760735 GGTAAGATAAGATAAGATTAGTCCCCC 58.239 40.741 0.00 0.00 0.00 5.40
2411 3087 9.974750 GTACACGTTTACTAGTTAGTAGGTAAG 57.025 37.037 0.00 0.00 39.69 2.34
2412 3088 8.653338 CGTACACGTTTACTAGTTAGTAGGTAA 58.347 37.037 9.97 0.00 36.07 2.85
2413 3089 8.181487 CGTACACGTTTACTAGTTAGTAGGTA 57.819 38.462 9.97 0.00 36.07 3.08
2414 3090 7.061752 CGTACACGTTTACTAGTTAGTAGGT 57.938 40.000 9.97 0.00 36.07 3.08
2603 3672 9.462174 TCATCGTTTCATGCCATATTAATTTTC 57.538 29.630 0.00 0.00 0.00 2.29
2954 4513 8.210265 CCATTTATTATAAAAAGGGTGCATGGT 58.790 33.333 1.28 0.00 34.02 3.55
3081 4666 4.096732 ACCAAAATTATCTGCTGCGAAC 57.903 40.909 0.00 0.00 0.00 3.95
3352 8152 4.201940 CCGGTGTTCTAAAGTTTTTCGGTT 60.202 41.667 0.00 0.00 0.00 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.