Multiple sequence alignment - TraesCS2D01G405500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G405500 chr2D 100.000 2688 0 0 1 2688 520584523 520581836 0.000000e+00 4964
1 TraesCS2D01G405500 chr2D 87.727 220 24 3 2445 2663 85828222 85828439 1.240000e-63 254
2 TraesCS2D01G405500 chr6B 91.985 786 56 6 930 1711 149055115 149055897 0.000000e+00 1096
3 TraesCS2D01G405500 chr6B 91.918 730 53 5 986 1711 171728475 171727748 0.000000e+00 1016
4 TraesCS2D01G405500 chr6B 84.058 414 39 11 5 415 171973016 171972627 9.090000e-100 374
5 TraesCS2D01G405500 chr6B 84.024 169 17 10 5 171 149054340 149054500 1.290000e-33 154
6 TraesCS2D01G405500 chr2B 86.934 949 60 27 4 933 613038609 613037706 0.000000e+00 1007
7 TraesCS2D01G405500 chr2B 88.301 718 43 23 1409 2100 613036890 613036188 0.000000e+00 822
8 TraesCS2D01G405500 chr2A 85.804 951 74 26 11 933 665845252 665844335 0.000000e+00 952
9 TraesCS2D01G405500 chr2A 90.411 730 40 17 1289 1996 665990546 665989825 0.000000e+00 933
10 TraesCS2D01G405500 chr2A 81.471 367 29 14 323 664 665991826 665991474 5.710000e-67 265
11 TraesCS2D01G405500 chr2A 86.235 247 18 6 693 933 665991477 665991241 1.240000e-63 254
12 TraesCS2D01G405500 chr6D 88.022 743 86 2 932 1672 75372246 75372987 0.000000e+00 876
13 TraesCS2D01G405500 chr6D 88.811 715 74 5 1001 1711 75372542 75373254 0.000000e+00 872
14 TraesCS2D01G405500 chr6D 85.610 410 43 8 4 409 89512835 89512438 1.490000e-112 416
15 TraesCS2D01G405500 chr6D 94.262 244 14 0 2445 2688 455533698 455533941 9.090000e-100 374
16 TraesCS2D01G405500 chr6D 84.298 242 34 4 2448 2687 42402061 42401822 1.610000e-57 233
17 TraesCS2D01G405500 chr6D 82.629 213 35 2 2448 2659 16664908 16665119 1.270000e-43 187
18 TraesCS2D01G405500 chr6D 84.615 169 18 8 5 171 75371327 75371489 7.700000e-36 161
19 TraesCS2D01G405500 chr6D 79.535 215 38 6 2448 2659 87274945 87274734 6.000000e-32 148
20 TraesCS2D01G405500 chr7D 89.650 686 69 2 998 1681 562149189 562148504 0.000000e+00 872
21 TraesCS2D01G405500 chr7D 88.489 695 78 2 1001 1693 562148958 562148264 0.000000e+00 839
22 TraesCS2D01G405500 chr7D 86.636 217 27 2 2448 2663 571080355 571080140 3.460000e-59 239
23 TraesCS2D01G405500 chr7A 89.177 693 73 2 998 1688 647917453 647916761 0.000000e+00 863
24 TraesCS2D01G405500 chrUn 88.968 698 73 3 998 1692 20705501 20706197 0.000000e+00 859
25 TraesCS2D01G405500 chr6A 86.880 343 30 5 4 342 107800341 107800010 1.180000e-98 370
26 TraesCS2D01G405500 chr4D 89.919 248 16 2 2441 2688 95125249 95125011 7.230000e-81 311
27 TraesCS2D01G405500 chr4D 88.479 217 23 2 2448 2663 207706647 207706432 7.380000e-66 261
28 TraesCS2D01G405500 chr4D 87.317 205 26 0 2459 2663 324251692 324251896 4.470000e-58 235
29 TraesCS2D01G405500 chr1D 90.909 220 18 2 2441 2659 416807249 416807467 7.280000e-76 294
30 TraesCS2D01G405500 chr1D 88.479 217 23 2 2448 2663 316339426 316339211 7.380000e-66 261
31 TraesCS2D01G405500 chr1D 90.769 130 12 0 2529 2658 416808550 416808679 9.890000e-40 174
32 TraesCS2D01G405500 chr1D 90.076 131 13 0 2529 2659 416810451 416810581 1.280000e-38 171
33 TraesCS2D01G405500 chr1D 90.076 131 13 0 2529 2659 416811921 416812051 1.280000e-38 171
34 TraesCS2D01G405500 chr1D 90.076 131 13 0 2529 2659 416816288 416816418 1.280000e-38 171
35 TraesCS2D01G405500 chr1D 88.889 90 9 1 2448 2536 395032227 395032316 2.830000e-20 110
36 TraesCS2D01G405500 chr3D 87.793 213 26 0 2447 2659 302262176 302261964 1.600000e-62 250
37 TraesCS2D01G405500 chr5D 85.714 217 29 2 2448 2663 503125966 503125751 7.490000e-56 228


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G405500 chr2D 520581836 520584523 2687 True 4964.000000 4964 100.000000 1 2688 1 chr2D.!!$R1 2687
1 TraesCS2D01G405500 chr6B 171727748 171728475 727 True 1016.000000 1016 91.918000 986 1711 1 chr6B.!!$R1 725
2 TraesCS2D01G405500 chr6B 149054340 149055897 1557 False 625.000000 1096 88.004500 5 1711 2 chr6B.!!$F1 1706
3 TraesCS2D01G405500 chr2B 613036188 613038609 2421 True 914.500000 1007 87.617500 4 2100 2 chr2B.!!$R1 2096
4 TraesCS2D01G405500 chr2A 665844335 665845252 917 True 952.000000 952 85.804000 11 933 1 chr2A.!!$R1 922
5 TraesCS2D01G405500 chr2A 665989825 665991826 2001 True 484.000000 933 86.039000 323 1996 3 chr2A.!!$R2 1673
6 TraesCS2D01G405500 chr6D 75371327 75373254 1927 False 636.333333 876 87.149333 5 1711 3 chr6D.!!$F3 1706
7 TraesCS2D01G405500 chr7D 562148264 562149189 925 True 855.500000 872 89.069500 998 1693 2 chr7D.!!$R2 695
8 TraesCS2D01G405500 chr7A 647916761 647917453 692 True 863.000000 863 89.177000 998 1688 1 chr7A.!!$R1 690
9 TraesCS2D01G405500 chrUn 20705501 20706197 696 False 859.000000 859 88.968000 998 1692 1 chrUn.!!$F1 694
10 TraesCS2D01G405500 chr1D 416807249 416812051 4802 False 202.500000 294 90.457500 2441 2659 4 chr1D.!!$F3 218

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
888 1075 0.384669 ACGGCGTGGTATAGAAGCTC 59.615 55.0 13.76 0.0 0.0 4.09 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2352 3540 0.038166 GGACCCCTGTGCAGAATGAA 59.962 55.0 0.02 0.0 39.69 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.400711 CTACCCCCTCCCCTCCTTT 59.599 63.158 0.00 0.00 0.00 3.11
43 44 1.915266 CTCACCACAGCTCCCAGGA 60.915 63.158 0.00 0.00 0.00 3.86
44 45 1.461268 TCACCACAGCTCCCAGGAA 60.461 57.895 0.00 0.00 0.00 3.36
45 46 1.302832 CACCACAGCTCCCAGGAAC 60.303 63.158 0.00 0.00 0.00 3.62
46 47 2.046892 CCACAGCTCCCAGGAACG 60.047 66.667 0.00 0.00 0.00 3.95
47 48 2.046892 CACAGCTCCCAGGAACGG 60.047 66.667 0.00 0.00 0.00 4.44
48 49 2.203788 ACAGCTCCCAGGAACGGA 60.204 61.111 0.00 0.00 0.00 4.69
82 86 1.700042 ATCCCCAGCCAATCTCGTCC 61.700 60.000 0.00 0.00 0.00 4.79
205 232 3.007635 GGTTGGAGGTGTAGTATTGTGC 58.992 50.000 0.00 0.00 0.00 4.57
215 243 5.121768 GGTGTAGTATTGTGCAATTTCGTCT 59.878 40.000 2.56 0.00 32.50 4.18
222 250 4.630894 TGTGCAATTTCGTCTGTTTCTT 57.369 36.364 0.00 0.00 0.00 2.52
223 251 4.992688 TGTGCAATTTCGTCTGTTTCTTT 58.007 34.783 0.00 0.00 0.00 2.52
346 403 2.172293 AGATTGAAGGGGCAGATCTGTC 59.828 50.000 23.38 21.47 0.00 3.51
357 414 1.468914 CAGATCTGTCCGTGTTCTCGA 59.531 52.381 14.95 0.00 0.00 4.04
409 487 7.014326 TGCATGATTTATCTACTAGTTCGTCCT 59.986 37.037 0.00 0.00 0.00 3.85
422 500 0.537188 TCGTCCTTTCCTGCCTGATC 59.463 55.000 0.00 0.00 0.00 2.92
423 501 0.539051 CGTCCTTTCCTGCCTGATCT 59.461 55.000 0.00 0.00 0.00 2.75
424 502 1.741732 CGTCCTTTCCTGCCTGATCTG 60.742 57.143 0.00 0.00 0.00 2.90
426 504 2.501723 GTCCTTTCCTGCCTGATCTGTA 59.498 50.000 0.00 0.00 0.00 2.74
427 505 2.768527 TCCTTTCCTGCCTGATCTGTAG 59.231 50.000 0.00 0.00 0.00 2.74
428 506 2.559440 CTTTCCTGCCTGATCTGTAGC 58.441 52.381 0.00 0.00 0.00 3.58
441 519 3.438297 TCTGTAGCCGCATAACTCTTC 57.562 47.619 0.00 0.00 0.00 2.87
483 561 2.906691 GCATAGTCTGCCTGATCTGT 57.093 50.000 0.00 0.00 45.66 3.41
563 659 9.748708 TTGTTAGTTGATTTTCCTCTGAATTTG 57.251 29.630 0.00 0.00 0.00 2.32
564 660 7.867403 TGTTAGTTGATTTTCCTCTGAATTTGC 59.133 33.333 0.00 0.00 0.00 3.68
664 790 3.573538 TGCACTTACCGTCTGTTAGGTTA 59.426 43.478 0.00 0.00 41.63 2.85
676 802 7.333423 CCGTCTGTTAGGTTATCTTCAATGAAA 59.667 37.037 0.00 0.00 0.00 2.69
818 966 0.870307 CGAGCATGCACCTACCGTAC 60.870 60.000 21.98 0.00 0.00 3.67
819 967 0.529992 GAGCATGCACCTACCGTACC 60.530 60.000 21.98 0.00 0.00 3.34
830 980 4.460382 CACCTACCGTACCTTAGTTTCTCA 59.540 45.833 0.00 0.00 0.00 3.27
832 982 5.184671 ACCTACCGTACCTTAGTTTCTCAAG 59.815 44.000 0.00 0.00 0.00 3.02
833 983 5.184671 CCTACCGTACCTTAGTTTCTCAAGT 59.815 44.000 0.00 0.00 0.00 3.16
835 985 4.586001 ACCGTACCTTAGTTTCTCAAGTGA 59.414 41.667 0.00 0.00 0.00 3.41
877 1064 2.883574 TGTTTAATCTCTACGGCGTGG 58.116 47.619 24.86 21.30 0.00 4.94
888 1075 0.384669 ACGGCGTGGTATAGAAGCTC 59.615 55.000 13.76 0.00 0.00 4.09
896 1084 5.106118 GCGTGGTATAGAAGCTCATCTATGA 60.106 44.000 15.40 0.00 41.55 2.15
926 1114 9.243105 AGTATTTGTCATATTAGTTTGCTTGGT 57.757 29.630 0.00 0.00 0.00 3.67
927 1115 9.503427 GTATTTGTCATATTAGTTTGCTTGGTC 57.497 33.333 0.00 0.00 0.00 4.02
928 1116 7.759489 TTTGTCATATTAGTTTGCTTGGTCT 57.241 32.000 0.00 0.00 0.00 3.85
929 1117 6.741992 TGTCATATTAGTTTGCTTGGTCTG 57.258 37.500 0.00 0.00 0.00 3.51
930 1118 5.123820 TGTCATATTAGTTTGCTTGGTCTGC 59.876 40.000 0.00 0.00 0.00 4.26
943 1131 5.709631 TGCTTGGTCTGCTTTGTCATATTAA 59.290 36.000 0.00 0.00 0.00 1.40
1041 1229 0.981183 TCACCGGCAAGACCATTACT 59.019 50.000 0.00 0.00 39.03 2.24
1269 1685 1.003355 CACCGGCAAGACCATCACT 60.003 57.895 0.00 0.00 39.03 3.41
1696 2845 0.811281 GTGGTCAGTAATTGCCCTGC 59.189 55.000 0.00 0.00 0.00 4.85
1713 2865 2.429930 CCGTTGGACCTGCTGGAA 59.570 61.111 17.64 0.00 37.04 3.53
1762 2915 1.061485 GAACTGTTCTCTCGTTCGCC 58.939 55.000 13.13 0.00 0.00 5.54
1764 2917 0.674534 ACTGTTCTCTCGTTCGCCTT 59.325 50.000 0.00 0.00 0.00 4.35
1768 2921 2.251893 GTTCTCTCGTTCGCCTTAGTG 58.748 52.381 0.00 0.00 0.00 2.74
1770 2923 1.467734 TCTCTCGTTCGCCTTAGTGTC 59.532 52.381 0.00 0.00 0.00 3.67
1771 2924 0.524862 TCTCGTTCGCCTTAGTGTCC 59.475 55.000 0.00 0.00 0.00 4.02
1821 2975 7.307751 CGAGTCACTGTTATGTGTTTGGTTTAT 60.308 37.037 0.00 0.00 38.90 1.40
1861 3019 9.722056 CAGCAGTTCCATTTAAGTAATGAATAC 57.278 33.333 0.00 0.00 45.35 1.89
1963 3136 4.397103 TGAATTGCTTGCTTGATCCTACTG 59.603 41.667 0.00 0.00 0.00 2.74
1985 3158 5.815581 TGGTTAGCTGTAAGATTTGGATGT 58.184 37.500 0.00 0.00 34.07 3.06
1998 3171 6.275335 AGATTTGGATGTTGCAATTTATCCG 58.725 36.000 23.65 0.00 41.54 4.18
2000 3173 4.630894 TGGATGTTGCAATTTATCCGTC 57.369 40.909 23.65 13.10 41.54 4.79
2001 3174 4.269183 TGGATGTTGCAATTTATCCGTCT 58.731 39.130 23.65 0.00 41.54 4.18
2002 3175 4.096231 TGGATGTTGCAATTTATCCGTCTG 59.904 41.667 23.65 0.00 41.54 3.51
2003 3176 4.498009 GGATGTTGCAATTTATCCGTCTGG 60.498 45.833 18.51 0.00 30.77 3.86
2016 3189 1.269448 CCGTCTGGAACCATTTTGTGG 59.731 52.381 0.00 0.00 46.36 4.17
2070 3258 8.758633 TTTTTGTGTTAAAAATTCTCGTTCCA 57.241 26.923 0.00 0.00 0.00 3.53
2071 3259 8.758633 TTTTGTGTTAAAAATTCTCGTTCCAA 57.241 26.923 0.00 0.00 0.00 3.53
2072 3260 8.934507 TTTGTGTTAAAAATTCTCGTTCCAAT 57.065 26.923 0.00 0.00 0.00 3.16
2073 3261 8.568732 TTGTGTTAAAAATTCTCGTTCCAATC 57.431 30.769 0.00 0.00 0.00 2.67
2091 3279 1.533625 TCTTTTTGCAGCGTGGCTAT 58.466 45.000 2.31 0.00 36.40 2.97
2092 3280 1.468520 TCTTTTTGCAGCGTGGCTATC 59.531 47.619 2.31 0.00 36.40 2.08
2100 3288 2.098117 GCAGCGTGGCTATCATTTCTTT 59.902 45.455 0.00 0.00 36.40 2.52
2101 3289 3.428045 GCAGCGTGGCTATCATTTCTTTT 60.428 43.478 0.00 0.00 36.40 2.27
2102 3290 4.737054 CAGCGTGGCTATCATTTCTTTTT 58.263 39.130 0.00 0.00 36.40 1.94
2103 3291 5.676079 GCAGCGTGGCTATCATTTCTTTTTA 60.676 40.000 0.00 0.00 36.40 1.52
2104 3292 6.321717 CAGCGTGGCTATCATTTCTTTTTAA 58.678 36.000 0.00 0.00 36.40 1.52
2105 3293 6.974622 CAGCGTGGCTATCATTTCTTTTTAAT 59.025 34.615 0.00 0.00 36.40 1.40
2106 3294 8.128582 CAGCGTGGCTATCATTTCTTTTTAATA 58.871 33.333 0.00 0.00 36.40 0.98
2107 3295 8.850156 AGCGTGGCTATCATTTCTTTTTAATAT 58.150 29.630 0.00 0.00 36.99 1.28
2123 3311 9.790389 CTTTTTAATATACCAAATACAACCGCA 57.210 29.630 0.00 0.00 0.00 5.69
2128 3316 8.641499 AATATACCAAATACAACCGCAAATTG 57.359 30.769 0.00 0.00 0.00 2.32
2129 3317 4.329462 ACCAAATACAACCGCAAATTGT 57.671 36.364 0.00 3.11 42.78 2.71
2130 3318 5.455056 ACCAAATACAACCGCAAATTGTA 57.545 34.783 6.84 6.84 44.42 2.41
2131 3319 5.844004 ACCAAATACAACCGCAAATTGTAA 58.156 33.333 8.11 0.00 43.74 2.41
2132 3320 5.923684 ACCAAATACAACCGCAAATTGTAAG 59.076 36.000 8.11 3.37 43.74 2.34
2133 3321 5.164002 CCAAATACAACCGCAAATTGTAAGC 60.164 40.000 8.11 0.00 43.74 3.09
2134 3322 5.385509 AATACAACCGCAAATTGTAAGCT 57.614 34.783 8.11 0.00 43.74 3.74
2135 3323 3.282831 ACAACCGCAAATTGTAAGCTC 57.717 42.857 0.00 0.00 38.51 4.09
2136 3324 2.241722 CAACCGCAAATTGTAAGCTCG 58.758 47.619 0.00 0.00 0.00 5.03
2137 3325 0.168128 ACCGCAAATTGTAAGCTCGC 59.832 50.000 0.00 0.00 0.00 5.03
2138 3326 0.447801 CCGCAAATTGTAAGCTCGCT 59.552 50.000 0.00 0.00 0.00 4.93
2139 3327 1.135689 CCGCAAATTGTAAGCTCGCTT 60.136 47.619 9.33 9.33 39.83 4.68
2140 3328 2.169179 CGCAAATTGTAAGCTCGCTTC 58.831 47.619 7.52 1.37 37.47 3.86
2141 3329 2.412716 CGCAAATTGTAAGCTCGCTTCA 60.413 45.455 7.52 3.89 37.47 3.02
2142 3330 3.564511 GCAAATTGTAAGCTCGCTTCAA 58.435 40.909 7.52 11.88 37.47 2.69
2143 3331 4.168760 GCAAATTGTAAGCTCGCTTCAAT 58.831 39.130 7.52 13.37 36.42 2.57
2144 3332 4.263911 GCAAATTGTAAGCTCGCTTCAATC 59.736 41.667 19.61 10.72 35.20 2.67
2145 3333 3.933155 ATTGTAAGCTCGCTTCAATCG 57.067 42.857 7.52 0.00 37.47 3.34
2146 3334 2.647529 TGTAAGCTCGCTTCAATCGA 57.352 45.000 7.52 0.00 37.47 3.59
2147 3335 2.954316 TGTAAGCTCGCTTCAATCGAA 58.046 42.857 7.52 0.00 37.47 3.71
2148 3336 3.521560 TGTAAGCTCGCTTCAATCGAAT 58.478 40.909 7.52 0.00 37.47 3.34
2149 3337 4.678622 TGTAAGCTCGCTTCAATCGAATA 58.321 39.130 7.52 0.00 37.47 1.75
2150 3338 4.503007 TGTAAGCTCGCTTCAATCGAATAC 59.497 41.667 7.52 0.00 37.47 1.89
2151 3339 3.165058 AGCTCGCTTCAATCGAATACA 57.835 42.857 0.00 0.00 35.38 2.29
2152 3340 3.521560 AGCTCGCTTCAATCGAATACAA 58.478 40.909 0.00 0.00 35.38 2.41
2153 3341 3.307242 AGCTCGCTTCAATCGAATACAAC 59.693 43.478 0.00 0.00 35.38 3.32
2154 3342 3.307242 GCTCGCTTCAATCGAATACAACT 59.693 43.478 0.00 0.00 35.38 3.16
2155 3343 4.780324 GCTCGCTTCAATCGAATACAACTG 60.780 45.833 0.00 0.00 35.38 3.16
2156 3344 3.616821 TCGCTTCAATCGAATACAACTGG 59.383 43.478 0.00 0.00 32.53 4.00
2157 3345 3.685058 GCTTCAATCGAATACAACTGGC 58.315 45.455 0.00 0.00 0.00 4.85
2158 3346 3.126858 GCTTCAATCGAATACAACTGGCA 59.873 43.478 0.00 0.00 0.00 4.92
2159 3347 4.728882 GCTTCAATCGAATACAACTGGCAG 60.729 45.833 14.16 14.16 0.00 4.85
2160 3348 4.200838 TCAATCGAATACAACTGGCAGA 57.799 40.909 23.66 0.00 0.00 4.26
2161 3349 3.932710 TCAATCGAATACAACTGGCAGAC 59.067 43.478 23.66 2.58 0.00 3.51
2162 3350 3.895232 ATCGAATACAACTGGCAGACT 57.105 42.857 23.66 4.61 0.00 3.24
2163 3351 3.678056 TCGAATACAACTGGCAGACTT 57.322 42.857 23.66 2.46 0.00 3.01
2164 3352 4.794278 TCGAATACAACTGGCAGACTTA 57.206 40.909 23.66 8.74 0.00 2.24
2165 3353 4.744570 TCGAATACAACTGGCAGACTTAG 58.255 43.478 23.66 8.08 0.00 2.18
2166 3354 4.219944 TCGAATACAACTGGCAGACTTAGT 59.780 41.667 23.66 13.35 0.00 2.24
2167 3355 4.929808 CGAATACAACTGGCAGACTTAGTT 59.070 41.667 23.66 8.38 35.18 2.24
2168 3356 5.408604 CGAATACAACTGGCAGACTTAGTTT 59.591 40.000 23.66 0.00 32.69 2.66
2169 3357 6.588756 CGAATACAACTGGCAGACTTAGTTTA 59.411 38.462 23.66 1.06 32.69 2.01
2170 3358 7.117236 CGAATACAACTGGCAGACTTAGTTTAA 59.883 37.037 23.66 0.00 32.69 1.52
2171 3359 7.668525 ATACAACTGGCAGACTTAGTTTAAC 57.331 36.000 23.66 0.00 32.69 2.01
2172 3360 5.681639 ACAACTGGCAGACTTAGTTTAACT 58.318 37.500 23.66 2.32 32.69 2.24
2173 3361 6.120220 ACAACTGGCAGACTTAGTTTAACTT 58.880 36.000 23.66 0.00 32.69 2.66
2174 3362 6.602009 ACAACTGGCAGACTTAGTTTAACTTT 59.398 34.615 23.66 0.00 32.69 2.66
2175 3363 6.619801 ACTGGCAGACTTAGTTTAACTTTG 57.380 37.500 23.66 0.00 0.00 2.77
2176 3364 5.008712 ACTGGCAGACTTAGTTTAACTTTGC 59.991 40.000 23.66 6.35 0.00 3.68
2177 3365 5.130350 TGGCAGACTTAGTTTAACTTTGCT 58.870 37.500 1.94 0.00 0.00 3.91
2178 3366 6.292923 TGGCAGACTTAGTTTAACTTTGCTA 58.707 36.000 1.94 2.22 0.00 3.49
2179 3367 6.768861 TGGCAGACTTAGTTTAACTTTGCTAA 59.231 34.615 1.94 0.00 0.00 3.09
2180 3368 7.076362 GGCAGACTTAGTTTAACTTTGCTAAC 58.924 38.462 1.94 0.00 0.00 2.34
2181 3369 6.790825 GCAGACTTAGTTTAACTTTGCTAACG 59.209 38.462 1.94 0.00 0.00 3.18
2182 3370 7.288672 CAGACTTAGTTTAACTTTGCTAACGG 58.711 38.462 1.94 0.00 0.00 4.44
2183 3371 7.170320 CAGACTTAGTTTAACTTTGCTAACGGA 59.830 37.037 1.94 0.00 0.00 4.69
2184 3372 7.876582 AGACTTAGTTTAACTTTGCTAACGGAT 59.123 33.333 1.94 0.00 0.00 4.18
2185 3373 7.803724 ACTTAGTTTAACTTTGCTAACGGATG 58.196 34.615 1.94 0.00 0.00 3.51
2186 3374 7.658575 ACTTAGTTTAACTTTGCTAACGGATGA 59.341 33.333 1.94 0.00 0.00 2.92
2187 3375 6.870971 AGTTTAACTTTGCTAACGGATGAA 57.129 33.333 0.00 0.00 0.00 2.57
2188 3376 6.665465 AGTTTAACTTTGCTAACGGATGAAC 58.335 36.000 0.00 0.00 0.00 3.18
2189 3377 6.261381 AGTTTAACTTTGCTAACGGATGAACA 59.739 34.615 0.00 0.00 0.00 3.18
2190 3378 6.621316 TTAACTTTGCTAACGGATGAACAA 57.379 33.333 0.00 0.00 0.00 2.83
2191 3379 4.749245 ACTTTGCTAACGGATGAACAAG 57.251 40.909 0.00 0.00 0.00 3.16
2192 3380 4.385825 ACTTTGCTAACGGATGAACAAGA 58.614 39.130 0.00 0.00 0.00 3.02
2193 3381 5.003804 ACTTTGCTAACGGATGAACAAGAT 58.996 37.500 0.00 0.00 0.00 2.40
2194 3382 6.170506 ACTTTGCTAACGGATGAACAAGATA 58.829 36.000 0.00 0.00 0.00 1.98
2195 3383 6.823689 ACTTTGCTAACGGATGAACAAGATAT 59.176 34.615 0.00 0.00 0.00 1.63
2196 3384 7.985184 ACTTTGCTAACGGATGAACAAGATATA 59.015 33.333 0.00 0.00 0.00 0.86
2197 3385 7.709269 TTGCTAACGGATGAACAAGATATAC 57.291 36.000 0.00 0.00 0.00 1.47
2198 3386 6.811954 TGCTAACGGATGAACAAGATATACA 58.188 36.000 0.00 0.00 0.00 2.29
2199 3387 7.269316 TGCTAACGGATGAACAAGATATACAA 58.731 34.615 0.00 0.00 0.00 2.41
2200 3388 7.931407 TGCTAACGGATGAACAAGATATACAAT 59.069 33.333 0.00 0.00 0.00 2.71
2201 3389 9.419297 GCTAACGGATGAACAAGATATACAATA 57.581 33.333 0.00 0.00 0.00 1.90
2238 3426 9.934190 AAAATTTCACAAAATAATTCACTGTGC 57.066 25.926 2.12 0.00 37.81 4.57
2239 3427 8.659925 AATTTCACAAAATAATTCACTGTGCA 57.340 26.923 2.12 0.00 37.81 4.57
2240 3428 8.659925 ATTTCACAAAATAATTCACTGTGCAA 57.340 26.923 2.12 0.00 37.81 4.08
2241 3429 8.484641 TTTCACAAAATAATTCACTGTGCAAA 57.515 26.923 2.12 0.00 37.81 3.68
2242 3430 8.659925 TTCACAAAATAATTCACTGTGCAAAT 57.340 26.923 2.12 0.00 37.81 2.32
2243 3431 9.755804 TTCACAAAATAATTCACTGTGCAAATA 57.244 25.926 2.12 0.00 37.81 1.40
2244 3432 9.755804 TCACAAAATAATTCACTGTGCAAATAA 57.244 25.926 2.12 0.00 37.81 1.40
2249 3437 8.776376 AATAATTCACTGTGCAAATAAAAGGG 57.224 30.769 2.12 0.00 0.00 3.95
2250 3438 6.418057 AATTCACTGTGCAAATAAAAGGGA 57.582 33.333 2.12 0.00 0.00 4.20
2251 3439 5.860941 TTCACTGTGCAAATAAAAGGGAA 57.139 34.783 2.12 0.00 0.00 3.97
2252 3440 6.418057 TTCACTGTGCAAATAAAAGGGAAT 57.582 33.333 2.12 0.00 0.00 3.01
2253 3441 5.782047 TCACTGTGCAAATAAAAGGGAATG 58.218 37.500 2.12 0.00 0.00 2.67
2254 3442 5.538053 TCACTGTGCAAATAAAAGGGAATGA 59.462 36.000 2.12 0.00 0.00 2.57
2255 3443 6.211184 TCACTGTGCAAATAAAAGGGAATGAT 59.789 34.615 2.12 0.00 0.00 2.45
2256 3444 6.311935 CACTGTGCAAATAAAAGGGAATGATG 59.688 38.462 0.00 0.00 0.00 3.07
2257 3445 6.211184 ACTGTGCAAATAAAAGGGAATGATGA 59.789 34.615 0.00 0.00 0.00 2.92
2258 3446 7.002250 TGTGCAAATAAAAGGGAATGATGAA 57.998 32.000 0.00 0.00 0.00 2.57
2259 3447 7.098477 TGTGCAAATAAAAGGGAATGATGAAG 58.902 34.615 0.00 0.00 0.00 3.02
2260 3448 7.039152 TGTGCAAATAAAAGGGAATGATGAAGA 60.039 33.333 0.00 0.00 0.00 2.87
2261 3449 7.818930 GTGCAAATAAAAGGGAATGATGAAGAA 59.181 33.333 0.00 0.00 0.00 2.52
2262 3450 7.818930 TGCAAATAAAAGGGAATGATGAAGAAC 59.181 33.333 0.00 0.00 0.00 3.01
2263 3451 7.818930 GCAAATAAAAGGGAATGATGAAGAACA 59.181 33.333 0.00 0.00 0.00 3.18
2264 3452 9.880157 CAAATAAAAGGGAATGATGAAGAACAT 57.120 29.630 0.00 0.00 42.47 2.71
2265 3453 9.880157 AAATAAAAGGGAATGATGAAGAACATG 57.120 29.630 0.00 0.00 39.56 3.21
2266 3454 8.827832 ATAAAAGGGAATGATGAAGAACATGA 57.172 30.769 0.00 0.00 39.56 3.07
2267 3455 6.770746 AAAGGGAATGATGAAGAACATGAG 57.229 37.500 0.00 0.00 39.56 2.90
2268 3456 5.705397 AGGGAATGATGAAGAACATGAGA 57.295 39.130 0.00 0.00 39.56 3.27
2269 3457 6.070951 AGGGAATGATGAAGAACATGAGAA 57.929 37.500 0.00 0.00 39.56 2.87
2270 3458 6.487828 AGGGAATGATGAAGAACATGAGAAA 58.512 36.000 0.00 0.00 39.56 2.52
2271 3459 6.950041 AGGGAATGATGAAGAACATGAGAAAA 59.050 34.615 0.00 0.00 39.56 2.29
2272 3460 7.452501 AGGGAATGATGAAGAACATGAGAAAAA 59.547 33.333 0.00 0.00 39.56 1.94
2273 3461 8.255905 GGGAATGATGAAGAACATGAGAAAAAT 58.744 33.333 0.00 0.00 39.56 1.82
2277 3465 9.798994 ATGATGAAGAACATGAGAAAAATAAGC 57.201 29.630 0.00 0.00 39.56 3.09
2278 3466 8.795513 TGATGAAGAACATGAGAAAAATAAGCA 58.204 29.630 0.00 0.00 39.56 3.91
2279 3467 9.630098 GATGAAGAACATGAGAAAAATAAGCAA 57.370 29.630 0.00 0.00 39.56 3.91
2280 3468 8.801715 TGAAGAACATGAGAAAAATAAGCAAC 57.198 30.769 0.00 0.00 0.00 4.17
2281 3469 8.412456 TGAAGAACATGAGAAAAATAAGCAACA 58.588 29.630 0.00 0.00 0.00 3.33
2282 3470 9.415544 GAAGAACATGAGAAAAATAAGCAACAT 57.584 29.630 0.00 0.00 0.00 2.71
2283 3471 8.752766 AGAACATGAGAAAAATAAGCAACATG 57.247 30.769 0.00 0.00 39.42 3.21
2284 3472 8.579006 AGAACATGAGAAAAATAAGCAACATGA 58.421 29.630 0.00 0.00 37.74 3.07
2285 3473 8.752766 AACATGAGAAAAATAAGCAACATGAG 57.247 30.769 0.00 0.00 37.74 2.90
2286 3474 8.114331 ACATGAGAAAAATAAGCAACATGAGA 57.886 30.769 0.00 0.00 37.74 3.27
2287 3475 8.579006 ACATGAGAAAAATAAGCAACATGAGAA 58.421 29.630 0.00 0.00 37.74 2.87
2288 3476 9.414295 CATGAGAAAAATAAGCAACATGAGAAA 57.586 29.630 0.00 0.00 36.87 2.52
2289 3477 9.985730 ATGAGAAAAATAAGCAACATGAGAAAA 57.014 25.926 0.00 0.00 0.00 2.29
2290 3478 9.985730 TGAGAAAAATAAGCAACATGAGAAAAT 57.014 25.926 0.00 0.00 0.00 1.82
2296 3484 8.566008 AATAAGCAACATGAGAAAATAATCGC 57.434 30.769 0.00 0.00 0.00 4.58
2297 3485 5.565592 AGCAACATGAGAAAATAATCGCA 57.434 34.783 0.00 0.00 33.62 5.10
2298 3486 5.953183 AGCAACATGAGAAAATAATCGCAA 58.047 33.333 0.00 0.00 32.82 4.85
2299 3487 5.801947 AGCAACATGAGAAAATAATCGCAAC 59.198 36.000 0.00 0.00 32.82 4.17
2300 3488 5.801947 GCAACATGAGAAAATAATCGCAACT 59.198 36.000 0.00 0.00 32.82 3.16
2301 3489 6.237384 GCAACATGAGAAAATAATCGCAACTG 60.237 38.462 0.00 0.00 32.82 3.16
2302 3490 5.883661 ACATGAGAAAATAATCGCAACTGG 58.116 37.500 0.00 0.00 32.82 4.00
2303 3491 5.647658 ACATGAGAAAATAATCGCAACTGGA 59.352 36.000 0.00 0.00 32.82 3.86
2304 3492 6.150976 ACATGAGAAAATAATCGCAACTGGAA 59.849 34.615 0.00 0.00 32.82 3.53
2305 3493 5.938322 TGAGAAAATAATCGCAACTGGAAC 58.062 37.500 0.00 0.00 0.00 3.62
2306 3494 5.106317 TGAGAAAATAATCGCAACTGGAACC 60.106 40.000 0.00 0.00 0.00 3.62
2307 3495 5.010282 AGAAAATAATCGCAACTGGAACCT 58.990 37.500 0.00 0.00 0.00 3.50
2308 3496 6.177610 AGAAAATAATCGCAACTGGAACCTA 58.822 36.000 0.00 0.00 0.00 3.08
2309 3497 6.316390 AGAAAATAATCGCAACTGGAACCTAG 59.684 38.462 0.00 0.00 0.00 3.02
2310 3498 5.353394 AATAATCGCAACTGGAACCTAGA 57.647 39.130 0.00 0.00 0.00 2.43
2311 3499 2.969628 ATCGCAACTGGAACCTAGAG 57.030 50.000 0.00 0.00 0.00 2.43
2312 3500 1.629043 TCGCAACTGGAACCTAGAGT 58.371 50.000 0.00 0.00 0.00 3.24
2313 3501 1.968493 TCGCAACTGGAACCTAGAGTT 59.032 47.619 0.00 0.00 43.07 3.01
2363 3551 8.746922 TCAGATAAAAATGTTTCATTCTGCAC 57.253 30.769 9.48 0.00 33.08 4.57
2364 3552 8.358895 TCAGATAAAAATGTTTCATTCTGCACA 58.641 29.630 9.48 0.00 33.08 4.57
2365 3553 8.644619 CAGATAAAAATGTTTCATTCTGCACAG 58.355 33.333 4.03 0.00 29.26 3.66
2366 3554 7.816031 AGATAAAAATGTTTCATTCTGCACAGG 59.184 33.333 0.00 0.00 0.00 4.00
2367 3555 3.947910 AATGTTTCATTCTGCACAGGG 57.052 42.857 0.00 0.00 0.00 4.45
2368 3556 1.619654 TGTTTCATTCTGCACAGGGG 58.380 50.000 0.00 0.00 0.00 4.79
2369 3557 1.133513 TGTTTCATTCTGCACAGGGGT 60.134 47.619 0.00 0.00 0.00 4.95
2370 3558 1.541588 GTTTCATTCTGCACAGGGGTC 59.458 52.381 0.00 0.00 0.00 4.46
2371 3559 0.038166 TTCATTCTGCACAGGGGTCC 59.962 55.000 0.00 0.00 0.00 4.46
2372 3560 1.133181 TCATTCTGCACAGGGGTCCA 61.133 55.000 0.00 0.00 0.00 4.02
2373 3561 0.251297 CATTCTGCACAGGGGTCCAA 60.251 55.000 0.00 0.00 0.00 3.53
2374 3562 0.482446 ATTCTGCACAGGGGTCCAAA 59.518 50.000 0.00 0.00 0.00 3.28
2375 3563 0.467290 TTCTGCACAGGGGTCCAAAC 60.467 55.000 0.00 0.00 0.00 2.93
2376 3564 1.903404 CTGCACAGGGGTCCAAACC 60.903 63.158 0.00 0.00 45.65 3.27
2384 3572 3.340789 GGTCCAAACCGTGCACTC 58.659 61.111 16.19 0.00 35.36 3.51
2385 3573 1.227853 GGTCCAAACCGTGCACTCT 60.228 57.895 16.19 0.00 35.36 3.24
2386 3574 0.818040 GGTCCAAACCGTGCACTCTT 60.818 55.000 16.19 2.49 35.36 2.85
2387 3575 1.021968 GTCCAAACCGTGCACTCTTT 58.978 50.000 16.19 8.91 0.00 2.52
2388 3576 1.404035 GTCCAAACCGTGCACTCTTTT 59.596 47.619 16.19 8.21 0.00 2.27
2389 3577 2.614983 GTCCAAACCGTGCACTCTTTTA 59.385 45.455 16.19 0.39 0.00 1.52
2390 3578 3.065648 GTCCAAACCGTGCACTCTTTTAA 59.934 43.478 16.19 0.10 0.00 1.52
2391 3579 3.314080 TCCAAACCGTGCACTCTTTTAAG 59.686 43.478 16.19 6.45 0.00 1.85
2392 3580 3.314080 CCAAACCGTGCACTCTTTTAAGA 59.686 43.478 16.19 0.00 0.00 2.10
2393 3581 4.279659 CAAACCGTGCACTCTTTTAAGAC 58.720 43.478 16.19 0.00 0.00 3.01
2394 3582 2.490991 ACCGTGCACTCTTTTAAGACC 58.509 47.619 16.19 0.00 0.00 3.85
2395 3583 2.104281 ACCGTGCACTCTTTTAAGACCT 59.896 45.455 16.19 0.00 0.00 3.85
2396 3584 2.480419 CCGTGCACTCTTTTAAGACCTG 59.520 50.000 16.19 0.00 0.00 4.00
2397 3585 2.480419 CGTGCACTCTTTTAAGACCTGG 59.520 50.000 16.19 0.00 0.00 4.45
2398 3586 2.814336 GTGCACTCTTTTAAGACCTGGG 59.186 50.000 10.32 0.00 0.00 4.45
2399 3587 2.441750 TGCACTCTTTTAAGACCTGGGT 59.558 45.455 0.00 0.00 0.00 4.51
2400 3588 3.649023 TGCACTCTTTTAAGACCTGGGTA 59.351 43.478 0.00 0.00 0.00 3.69
2401 3589 4.254492 GCACTCTTTTAAGACCTGGGTAG 58.746 47.826 0.00 0.00 0.00 3.18
2402 3590 4.254492 CACTCTTTTAAGACCTGGGTAGC 58.746 47.826 0.00 0.00 0.00 3.58
2403 3591 3.056035 ACTCTTTTAAGACCTGGGTAGCG 60.056 47.826 0.00 0.00 0.00 4.26
2404 3592 3.167485 TCTTTTAAGACCTGGGTAGCGA 58.833 45.455 0.00 0.00 0.00 4.93
2405 3593 3.194968 TCTTTTAAGACCTGGGTAGCGAG 59.805 47.826 0.00 0.00 0.00 5.03
2406 3594 2.519771 TTAAGACCTGGGTAGCGAGA 57.480 50.000 5.42 0.00 0.00 4.04
2407 3595 2.519771 TAAGACCTGGGTAGCGAGAA 57.480 50.000 5.42 0.00 0.00 2.87
2408 3596 1.640917 AAGACCTGGGTAGCGAGAAA 58.359 50.000 5.42 0.00 0.00 2.52
2409 3597 1.187087 AGACCTGGGTAGCGAGAAAG 58.813 55.000 5.42 0.00 0.00 2.62
2410 3598 1.183549 GACCTGGGTAGCGAGAAAGA 58.816 55.000 5.42 0.00 0.00 2.52
2411 3599 1.549170 GACCTGGGTAGCGAGAAAGAA 59.451 52.381 5.42 0.00 0.00 2.52
2412 3600 1.550976 ACCTGGGTAGCGAGAAAGAAG 59.449 52.381 5.42 0.00 0.00 2.85
2413 3601 1.825474 CCTGGGTAGCGAGAAAGAAGA 59.175 52.381 5.42 0.00 0.00 2.87
2414 3602 2.417515 CCTGGGTAGCGAGAAAGAAGAC 60.418 54.545 5.42 0.00 0.00 3.01
2415 3603 2.494073 CTGGGTAGCGAGAAAGAAGACT 59.506 50.000 0.00 0.00 0.00 3.24
2416 3604 3.693807 TGGGTAGCGAGAAAGAAGACTA 58.306 45.455 0.00 0.00 0.00 2.59
2417 3605 4.084287 TGGGTAGCGAGAAAGAAGACTAA 58.916 43.478 0.00 0.00 0.00 2.24
2418 3606 4.710375 TGGGTAGCGAGAAAGAAGACTAAT 59.290 41.667 0.00 0.00 0.00 1.73
2419 3607 5.187186 TGGGTAGCGAGAAAGAAGACTAATT 59.813 40.000 0.00 0.00 0.00 1.40
2420 3608 5.520649 GGGTAGCGAGAAAGAAGACTAATTG 59.479 44.000 0.00 0.00 0.00 2.32
2421 3609 5.520649 GGTAGCGAGAAAGAAGACTAATTGG 59.479 44.000 0.00 0.00 0.00 3.16
2422 3610 5.407407 AGCGAGAAAGAAGACTAATTGGA 57.593 39.130 0.00 0.00 0.00 3.53
2423 3611 5.415221 AGCGAGAAAGAAGACTAATTGGAG 58.585 41.667 0.00 0.00 0.00 3.86
2424 3612 5.186021 AGCGAGAAAGAAGACTAATTGGAGA 59.814 40.000 0.00 0.00 0.00 3.71
2425 3613 6.045955 GCGAGAAAGAAGACTAATTGGAGAT 58.954 40.000 0.00 0.00 0.00 2.75
2426 3614 7.068839 AGCGAGAAAGAAGACTAATTGGAGATA 59.931 37.037 0.00 0.00 0.00 1.98
2427 3615 7.707035 GCGAGAAAGAAGACTAATTGGAGATAA 59.293 37.037 0.00 0.00 0.00 1.75
2428 3616 9.757227 CGAGAAAGAAGACTAATTGGAGATAAT 57.243 33.333 0.00 0.00 0.00 1.28
2437 3625 9.829507 AGACTAATTGGAGATAATTGAGTTGAG 57.170 33.333 0.00 0.00 32.79 3.02
2438 3626 8.443953 ACTAATTGGAGATAATTGAGTTGAGC 57.556 34.615 0.00 0.00 32.79 4.26
2439 3627 8.270744 ACTAATTGGAGATAATTGAGTTGAGCT 58.729 33.333 0.00 0.00 32.79 4.09
2440 3628 7.951347 AATTGGAGATAATTGAGTTGAGCTT 57.049 32.000 0.00 0.00 0.00 3.74
2441 3629 6.992063 TTGGAGATAATTGAGTTGAGCTTC 57.008 37.500 0.00 0.00 0.00 3.86
2442 3630 6.053632 TGGAGATAATTGAGTTGAGCTTCA 57.946 37.500 0.00 0.00 0.00 3.02
2443 3631 6.111382 TGGAGATAATTGAGTTGAGCTTCAG 58.889 40.000 0.00 0.00 0.00 3.02
2444 3632 5.526846 GGAGATAATTGAGTTGAGCTTCAGG 59.473 44.000 0.00 0.00 0.00 3.86
2445 3633 5.435291 AGATAATTGAGTTGAGCTTCAGGG 58.565 41.667 0.00 0.00 0.00 4.45
2446 3634 3.795688 AATTGAGTTGAGCTTCAGGGA 57.204 42.857 0.00 0.00 0.00 4.20
2447 3635 3.795688 ATTGAGTTGAGCTTCAGGGAA 57.204 42.857 0.00 0.00 0.00 3.97
2448 3636 3.795688 TTGAGTTGAGCTTCAGGGAAT 57.204 42.857 0.00 0.00 0.00 3.01
2449 3637 4.908601 TTGAGTTGAGCTTCAGGGAATA 57.091 40.909 0.00 0.00 0.00 1.75
2450 3638 4.908601 TGAGTTGAGCTTCAGGGAATAA 57.091 40.909 0.00 0.00 0.00 1.40
2451 3639 4.836825 TGAGTTGAGCTTCAGGGAATAAG 58.163 43.478 0.00 0.00 0.00 1.73
2452 3640 4.287067 TGAGTTGAGCTTCAGGGAATAAGT 59.713 41.667 0.00 0.00 0.00 2.24
2453 3641 5.483937 TGAGTTGAGCTTCAGGGAATAAGTA 59.516 40.000 0.00 0.00 0.00 2.24
2454 3642 6.156949 TGAGTTGAGCTTCAGGGAATAAGTAT 59.843 38.462 0.00 0.00 0.00 2.12
2455 3643 6.963322 AGTTGAGCTTCAGGGAATAAGTATT 58.037 36.000 0.00 0.00 0.00 1.89
2456 3644 7.406104 AGTTGAGCTTCAGGGAATAAGTATTT 58.594 34.615 0.00 0.00 0.00 1.40
2457 3645 8.548877 AGTTGAGCTTCAGGGAATAAGTATTTA 58.451 33.333 0.00 0.00 0.00 1.40
2472 3660 6.567602 AAGTATTTAGGGAGAACATGAGCT 57.432 37.500 0.00 0.00 0.00 4.09
2473 3661 6.168270 AGTATTTAGGGAGAACATGAGCTC 57.832 41.667 6.82 6.82 0.00 4.09
2610 8382 5.988310 TGAATAGTTCCCTCTCGTTTGTA 57.012 39.130 0.00 0.00 0.00 2.41
2612 8384 4.732672 ATAGTTCCCTCTCGTTTGTACC 57.267 45.455 0.00 0.00 0.00 3.34
2617 8389 1.012486 CCTCTCGTTTGTACCACCGC 61.012 60.000 0.00 0.00 0.00 5.68
2618 8390 1.342082 CTCTCGTTTGTACCACCGCG 61.342 60.000 0.00 0.00 0.00 6.46
2619 8391 1.662446 CTCGTTTGTACCACCGCGT 60.662 57.895 4.92 0.00 0.00 6.01
2629 8401 1.153353 ACCACCGCGTGTTAATTCAG 58.847 50.000 4.92 0.00 0.00 3.02
2636 8408 1.529226 CGTGTTAATTCAGTGCCCCA 58.471 50.000 0.00 0.00 0.00 4.96
2638 8410 2.159393 CGTGTTAATTCAGTGCCCCATG 60.159 50.000 0.00 0.00 0.00 3.66
2659 8431 2.093500 GGAGGGCATTTTGGTCATTTCC 60.093 50.000 0.00 0.00 0.00 3.13
2660 8432 1.908619 AGGGCATTTTGGTCATTTCCC 59.091 47.619 0.00 0.00 0.00 3.97
2661 8433 1.405391 GGGCATTTTGGTCATTTCCCG 60.405 52.381 0.00 0.00 0.00 5.14
2662 8434 1.275010 GGCATTTTGGTCATTTCCCGT 59.725 47.619 0.00 0.00 0.00 5.28
2663 8435 2.336667 GCATTTTGGTCATTTCCCGTG 58.663 47.619 0.00 0.00 0.00 4.94
2664 8436 2.336667 CATTTTGGTCATTTCCCGTGC 58.663 47.619 0.00 0.00 0.00 5.34
2665 8437 1.403814 TTTTGGTCATTTCCCGTGCA 58.596 45.000 0.00 0.00 0.00 4.57
2666 8438 0.958091 TTTGGTCATTTCCCGTGCAG 59.042 50.000 0.00 0.00 0.00 4.41
2667 8439 0.893270 TTGGTCATTTCCCGTGCAGG 60.893 55.000 0.00 0.00 40.63 4.85
2668 8440 1.303317 GGTCATTTCCCGTGCAGGT 60.303 57.895 5.57 0.00 38.74 4.00
2669 8441 0.893727 GGTCATTTCCCGTGCAGGTT 60.894 55.000 5.57 0.00 38.74 3.50
2670 8442 0.958822 GTCATTTCCCGTGCAGGTTT 59.041 50.000 5.57 0.00 38.74 3.27
2671 8443 1.339929 GTCATTTCCCGTGCAGGTTTT 59.660 47.619 5.57 0.00 38.74 2.43
2672 8444 2.035632 TCATTTCCCGTGCAGGTTTTT 58.964 42.857 5.57 0.00 38.74 1.94
2673 8445 3.004944 GTCATTTCCCGTGCAGGTTTTTA 59.995 43.478 5.57 0.00 38.74 1.52
2674 8446 3.637229 TCATTTCCCGTGCAGGTTTTTAA 59.363 39.130 5.57 0.00 38.74 1.52
2675 8447 4.099573 TCATTTCCCGTGCAGGTTTTTAAA 59.900 37.500 5.57 0.00 38.74 1.52
2676 8448 3.719173 TTCCCGTGCAGGTTTTTAAAG 57.281 42.857 5.57 0.00 38.74 1.85
2677 8449 1.957877 TCCCGTGCAGGTTTTTAAAGG 59.042 47.619 5.57 0.00 38.74 3.11
2678 8450 1.000394 CCCGTGCAGGTTTTTAAAGGG 60.000 52.381 5.57 0.00 38.74 3.95
2679 8451 1.604438 CCGTGCAGGTTTTTAAAGGGC 60.604 52.381 5.57 0.00 34.51 5.19
2680 8452 1.067821 CGTGCAGGTTTTTAAAGGGCA 59.932 47.619 0.00 0.00 0.00 5.36
2681 8453 2.754472 GTGCAGGTTTTTAAAGGGCAG 58.246 47.619 0.00 0.00 0.00 4.85
2682 8454 1.069978 TGCAGGTTTTTAAAGGGCAGC 59.930 47.619 0.00 0.00 0.00 5.25
2683 8455 1.608025 GCAGGTTTTTAAAGGGCAGCC 60.608 52.381 1.26 1.26 0.00 4.85
2684 8456 0.966179 AGGTTTTTAAAGGGCAGCCG 59.034 50.000 5.00 0.00 0.00 5.52
2685 8457 0.669318 GGTTTTTAAAGGGCAGCCGC 60.669 55.000 5.00 0.00 37.44 6.53
2686 8458 0.317160 GTTTTTAAAGGGCAGCCGCT 59.683 50.000 5.00 0.34 38.60 5.52
2687 8459 0.601057 TTTTTAAAGGGCAGCCGCTC 59.399 50.000 5.00 0.00 39.82 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.399057 GAAAGGAGGGGAGGGGGTA 59.601 63.158 0.00 0.00 0.00 3.69
3 4 2.127528 GAAAGGAGGGGAGGGGGT 59.872 66.667 0.00 0.00 0.00 4.95
8 9 2.092699 GTGAGGATTGAAAGGAGGGGAG 60.093 54.545 0.00 0.00 0.00 4.30
19 20 0.615331 GGAGCTGTGGTGAGGATTGA 59.385 55.000 0.00 0.00 0.00 2.57
43 44 1.461559 TTGTTGGTTCCGTTTCCGTT 58.538 45.000 0.00 0.00 0.00 4.44
44 45 1.461559 TTTGTTGGTTCCGTTTCCGT 58.538 45.000 0.00 0.00 0.00 4.69
45 46 2.606065 GGATTTGTTGGTTCCGTTTCCG 60.606 50.000 0.00 0.00 0.00 4.30
46 47 2.288579 GGGATTTGTTGGTTCCGTTTCC 60.289 50.000 0.00 0.00 0.00 3.13
47 48 2.288579 GGGGATTTGTTGGTTCCGTTTC 60.289 50.000 0.00 0.00 0.00 2.78
48 49 1.689813 GGGGATTTGTTGGTTCCGTTT 59.310 47.619 0.00 0.00 0.00 3.60
205 232 5.507077 TCGGAAAAGAAACAGACGAAATTG 58.493 37.500 0.00 0.00 0.00 2.32
215 243 4.154737 CAGCATCAGATCGGAAAAGAAACA 59.845 41.667 0.00 0.00 0.00 2.83
222 250 1.407299 CCCACAGCATCAGATCGGAAA 60.407 52.381 0.00 0.00 0.00 3.13
223 251 0.178767 CCCACAGCATCAGATCGGAA 59.821 55.000 0.00 0.00 0.00 4.30
346 403 5.523916 AGGAATTAATTGATCGAGAACACGG 59.476 40.000 5.17 0.00 0.00 4.94
409 487 1.210478 GGCTACAGATCAGGCAGGAAA 59.790 52.381 0.00 0.00 38.41 3.13
422 500 3.165058 TGAAGAGTTATGCGGCTACAG 57.835 47.619 0.00 0.00 0.00 2.74
423 501 3.132111 TCATGAAGAGTTATGCGGCTACA 59.868 43.478 0.00 0.00 0.00 2.74
424 502 3.717707 TCATGAAGAGTTATGCGGCTAC 58.282 45.455 0.00 0.00 0.00 3.58
426 504 2.988010 TCATGAAGAGTTATGCGGCT 57.012 45.000 0.00 0.00 0.00 5.52
427 505 3.561310 TCAATCATGAAGAGTTATGCGGC 59.439 43.478 0.00 0.00 30.99 6.53
428 506 5.739752 TTCAATCATGAAGAGTTATGCGG 57.260 39.130 0.00 0.00 40.59 5.69
441 519 7.204604 TGCAGCTACCATTTAATTCAATCATG 58.795 34.615 0.00 0.00 0.00 3.07
483 561 7.043961 AGAACAAGAATATGATCACGAGCTA 57.956 36.000 0.00 0.00 0.00 3.32
564 660 6.603237 TGTCGGACATGCTTATATCAAAAG 57.397 37.500 6.76 0.00 0.00 2.27
634 760 1.328680 GACGGTAAGTGCATGCAGATG 59.671 52.381 23.41 10.47 0.00 2.90
635 761 1.208052 AGACGGTAAGTGCATGCAGAT 59.792 47.619 23.41 15.47 0.00 2.90
636 762 0.608130 AGACGGTAAGTGCATGCAGA 59.392 50.000 23.41 6.71 0.00 4.26
637 763 0.723414 CAGACGGTAAGTGCATGCAG 59.277 55.000 23.41 10.95 0.00 4.41
638 764 0.034756 ACAGACGGTAAGTGCATGCA 59.965 50.000 18.46 18.46 0.00 3.96
647 773 6.839124 TGAAGATAACCTAACAGACGGTAA 57.161 37.500 0.00 0.00 32.07 2.85
676 802 4.870363 ACAAACGACAGCAGCATATTTTT 58.130 34.783 0.00 0.00 0.00 1.94
843 1030 7.865707 AGAGATTAAACAAACAACAGTAGCAG 58.134 34.615 0.00 0.00 0.00 4.24
904 1092 7.592938 CAGACCAAGCAAACTAATATGACAAA 58.407 34.615 0.00 0.00 0.00 2.83
905 1093 6.349280 GCAGACCAAGCAAACTAATATGACAA 60.349 38.462 0.00 0.00 0.00 3.18
906 1094 5.123820 GCAGACCAAGCAAACTAATATGACA 59.876 40.000 0.00 0.00 0.00 3.58
907 1095 5.355350 AGCAGACCAAGCAAACTAATATGAC 59.645 40.000 0.00 0.00 0.00 3.06
908 1096 5.500234 AGCAGACCAAGCAAACTAATATGA 58.500 37.500 0.00 0.00 0.00 2.15
909 1097 5.824904 AGCAGACCAAGCAAACTAATATG 57.175 39.130 0.00 0.00 0.00 1.78
910 1098 6.209391 ACAAAGCAGACCAAGCAAACTAATAT 59.791 34.615 0.00 0.00 0.00 1.28
911 1099 5.534654 ACAAAGCAGACCAAGCAAACTAATA 59.465 36.000 0.00 0.00 0.00 0.98
912 1100 4.342092 ACAAAGCAGACCAAGCAAACTAAT 59.658 37.500 0.00 0.00 0.00 1.73
913 1101 3.699038 ACAAAGCAGACCAAGCAAACTAA 59.301 39.130 0.00 0.00 0.00 2.24
914 1102 3.287222 ACAAAGCAGACCAAGCAAACTA 58.713 40.909 0.00 0.00 0.00 2.24
915 1103 2.099756 GACAAAGCAGACCAAGCAAACT 59.900 45.455 0.00 0.00 0.00 2.66
916 1104 2.159254 TGACAAAGCAGACCAAGCAAAC 60.159 45.455 0.00 0.00 0.00 2.93
917 1105 2.098614 TGACAAAGCAGACCAAGCAAA 58.901 42.857 0.00 0.00 0.00 3.68
918 1106 1.761449 TGACAAAGCAGACCAAGCAA 58.239 45.000 0.00 0.00 0.00 3.91
919 1107 1.985473 ATGACAAAGCAGACCAAGCA 58.015 45.000 0.00 0.00 0.00 3.91
920 1108 4.708726 AATATGACAAAGCAGACCAAGC 57.291 40.909 0.00 0.00 0.00 4.01
921 1109 9.079833 CAAATTAATATGACAAAGCAGACCAAG 57.920 33.333 0.00 0.00 0.00 3.61
922 1110 7.545265 GCAAATTAATATGACAAAGCAGACCAA 59.455 33.333 0.00 0.00 0.00 3.67
923 1111 7.035004 GCAAATTAATATGACAAAGCAGACCA 58.965 34.615 0.00 0.00 0.00 4.02
924 1112 7.260603 AGCAAATTAATATGACAAAGCAGACC 58.739 34.615 0.00 0.00 0.00 3.85
925 1113 8.589629 CAAGCAAATTAATATGACAAAGCAGAC 58.410 33.333 0.00 0.00 0.00 3.51
926 1114 7.760794 CCAAGCAAATTAATATGACAAAGCAGA 59.239 33.333 0.00 0.00 0.00 4.26
927 1115 7.546667 ACCAAGCAAATTAATATGACAAAGCAG 59.453 33.333 0.00 0.00 0.00 4.24
928 1116 7.385267 ACCAAGCAAATTAATATGACAAAGCA 58.615 30.769 0.00 0.00 0.00 3.91
929 1117 7.761249 AGACCAAGCAAATTAATATGACAAAGC 59.239 33.333 0.00 0.00 0.00 3.51
930 1118 9.079833 CAGACCAAGCAAATTAATATGACAAAG 57.920 33.333 0.00 0.00 0.00 2.77
943 1131 3.225104 TCAAGAAGCAGACCAAGCAAAT 58.775 40.909 0.00 0.00 0.00 2.32
1041 1229 2.560542 GTCAGAGCTCTCAACCTCAAGA 59.439 50.000 14.96 1.47 0.00 3.02
1269 1685 2.828520 GTCAGATGACTCCACCTCAAGA 59.171 50.000 5.72 0.00 41.65 3.02
1396 2180 5.104259 ACTCCTTCTGGATGTTGTAATCC 57.896 43.478 0.00 0.00 45.57 3.01
1399 2183 3.907474 TGGACTCCTTCTGGATGTTGTAA 59.093 43.478 0.00 0.00 42.29 2.41
1591 2740 2.307162 ATCCTCCAGCTGCTTGCCT 61.307 57.895 8.66 0.00 44.23 4.75
1696 2845 1.672356 CTTCCAGCAGGTCCAACGG 60.672 63.158 0.00 0.00 35.89 4.44
1713 2865 0.393808 ACACAACGGACAACCAAGCT 60.394 50.000 0.00 0.00 35.59 3.74
1721 2873 0.105224 ATGAACGGACACAACGGACA 59.895 50.000 0.00 0.00 35.23 4.02
1751 2904 1.467713 GGACACTAAGGCGAACGAGAG 60.468 57.143 0.00 0.00 0.00 3.20
1753 2906 0.526662 AGGACACTAAGGCGAACGAG 59.473 55.000 0.00 0.00 0.00 4.18
1762 2915 8.786826 TCATTAAACCAACATAGGACACTAAG 57.213 34.615 0.00 0.00 31.86 2.18
1764 2917 8.380099 AGTTCATTAAACCAACATAGGACACTA 58.620 33.333 0.00 0.00 38.76 2.74
1793 2947 4.690748 CCAAACACATAACAGTGACTCGAT 59.309 41.667 0.00 0.00 42.05 3.59
1794 2948 4.055360 CCAAACACATAACAGTGACTCGA 58.945 43.478 0.00 0.00 42.05 4.04
1861 3019 5.567534 CACAAGATTTACCCGAAAATTCACG 59.432 40.000 0.00 0.00 0.00 4.35
1867 3025 4.580995 TCAAGCACAAGATTTACCCGAAAA 59.419 37.500 0.00 0.00 0.00 2.29
1931 3091 1.065358 CAAGCAATTCAAGCGCAAGG 58.935 50.000 11.47 0.00 37.01 3.61
1963 3136 6.555315 CAACATCCAAATCTTACAGCTAACC 58.445 40.000 0.00 0.00 0.00 2.85
1985 3158 3.442273 GGTTCCAGACGGATAAATTGCAA 59.558 43.478 0.00 0.00 42.41 4.08
2007 3180 1.479323 CAGCAGGGATCCCACAAAATG 59.521 52.381 32.69 20.88 38.92 2.32
2008 3181 1.856629 CAGCAGGGATCCCACAAAAT 58.143 50.000 32.69 7.97 38.92 1.82
2009 3182 0.899717 GCAGCAGGGATCCCACAAAA 60.900 55.000 32.69 0.00 38.92 2.44
2010 3183 1.304381 GCAGCAGGGATCCCACAAA 60.304 57.895 32.69 0.00 38.92 2.83
2012 3185 4.100084 CGCAGCAGGGATCCCACA 62.100 66.667 32.69 0.00 38.92 4.17
2013 3186 2.252072 TAACGCAGCAGGGATCCCAC 62.252 60.000 32.69 23.16 38.92 4.61
2016 3189 1.334869 CAATTAACGCAGCAGGGATCC 59.665 52.381 1.92 1.92 0.00 3.36
2021 3208 1.535028 TCACACAATTAACGCAGCAGG 59.465 47.619 0.00 0.00 0.00 4.85
2054 3242 8.760569 GCAAAAAGATTGGAACGAGAATTTTTA 58.239 29.630 0.00 0.00 30.03 1.52
2065 3253 2.472488 CACGCTGCAAAAAGATTGGAAC 59.528 45.455 0.00 0.00 0.00 3.62
2066 3254 2.545532 CCACGCTGCAAAAAGATTGGAA 60.546 45.455 0.00 0.00 0.00 3.53
2067 3255 1.000385 CCACGCTGCAAAAAGATTGGA 60.000 47.619 0.00 0.00 0.00 3.53
2068 3256 1.421382 CCACGCTGCAAAAAGATTGG 58.579 50.000 0.00 0.00 0.00 3.16
2069 3257 0.785979 GCCACGCTGCAAAAAGATTG 59.214 50.000 0.00 0.00 0.00 2.67
2070 3258 0.675633 AGCCACGCTGCAAAAAGATT 59.324 45.000 0.00 0.00 37.57 2.40
2071 3259 1.533625 TAGCCACGCTGCAAAAAGAT 58.466 45.000 0.00 0.00 40.10 2.40
2072 3260 1.468520 GATAGCCACGCTGCAAAAAGA 59.531 47.619 0.00 0.00 40.10 2.52
2073 3261 1.199789 TGATAGCCACGCTGCAAAAAG 59.800 47.619 0.00 0.00 40.10 2.27
2102 3290 9.737427 CAATTTGCGGTTGTATTTGGTATATTA 57.263 29.630 0.00 0.00 0.00 0.98
2103 3291 8.254508 ACAATTTGCGGTTGTATTTGGTATATT 58.745 29.630 0.00 0.00 37.98 1.28
2104 3292 7.777095 ACAATTTGCGGTTGTATTTGGTATAT 58.223 30.769 0.00 0.00 37.98 0.86
2105 3293 7.159322 ACAATTTGCGGTTGTATTTGGTATA 57.841 32.000 0.00 0.00 37.98 1.47
2106 3294 6.031751 ACAATTTGCGGTTGTATTTGGTAT 57.968 33.333 0.00 0.00 37.98 2.73
2107 3295 5.455056 ACAATTTGCGGTTGTATTTGGTA 57.545 34.783 0.00 0.00 37.98 3.25
2108 3296 4.329462 ACAATTTGCGGTTGTATTTGGT 57.671 36.364 0.00 0.00 37.98 3.67
2109 3297 5.164002 GCTTACAATTTGCGGTTGTATTTGG 60.164 40.000 8.57 3.46 40.55 3.28
2110 3298 5.633182 AGCTTACAATTTGCGGTTGTATTTG 59.367 36.000 8.57 5.16 40.55 2.32
2111 3299 5.778862 AGCTTACAATTTGCGGTTGTATTT 58.221 33.333 8.57 0.00 40.55 1.40
2112 3300 5.385509 AGCTTACAATTTGCGGTTGTATT 57.614 34.783 8.57 0.00 40.55 1.89
2113 3301 4.436852 CGAGCTTACAATTTGCGGTTGTAT 60.437 41.667 8.57 0.00 40.55 2.29
2114 3302 3.120477 CGAGCTTACAATTTGCGGTTGTA 60.120 43.478 0.00 4.79 40.13 2.41
2115 3303 2.350388 CGAGCTTACAATTTGCGGTTGT 60.350 45.455 0.00 6.45 42.12 3.32
2116 3304 2.241722 CGAGCTTACAATTTGCGGTTG 58.758 47.619 0.00 0.00 0.00 3.77
2117 3305 1.401018 GCGAGCTTACAATTTGCGGTT 60.401 47.619 0.00 0.00 0.00 4.44
2118 3306 0.168128 GCGAGCTTACAATTTGCGGT 59.832 50.000 0.00 0.00 0.00 5.68
2119 3307 0.447801 AGCGAGCTTACAATTTGCGG 59.552 50.000 0.00 0.00 0.00 5.69
2120 3308 2.169179 GAAGCGAGCTTACAATTTGCG 58.831 47.619 10.59 0.00 36.26 4.85
2121 3309 3.201726 TGAAGCGAGCTTACAATTTGC 57.798 42.857 10.59 0.00 36.26 3.68
2122 3310 4.493350 CGATTGAAGCGAGCTTACAATTTG 59.507 41.667 23.03 18.19 35.76 2.32
2123 3311 4.391830 TCGATTGAAGCGAGCTTACAATTT 59.608 37.500 23.03 12.33 35.76 1.82
2124 3312 3.932710 TCGATTGAAGCGAGCTTACAATT 59.067 39.130 23.03 14.21 35.76 2.32
2125 3313 3.521560 TCGATTGAAGCGAGCTTACAAT 58.478 40.909 22.69 22.69 36.96 2.71
2126 3314 2.954316 TCGATTGAAGCGAGCTTACAA 58.046 42.857 10.59 15.23 36.26 2.41
2127 3315 2.647529 TCGATTGAAGCGAGCTTACA 57.352 45.000 10.59 7.88 36.26 2.41
2128 3316 4.503007 TGTATTCGATTGAAGCGAGCTTAC 59.497 41.667 10.59 9.98 39.14 2.34
2129 3317 4.678622 TGTATTCGATTGAAGCGAGCTTA 58.321 39.130 10.59 0.00 39.14 3.09
2130 3318 3.521560 TGTATTCGATTGAAGCGAGCTT 58.478 40.909 10.40 10.40 39.14 3.74
2131 3319 3.165058 TGTATTCGATTGAAGCGAGCT 57.835 42.857 5.48 0.46 39.14 4.09
2132 3320 3.307242 AGTTGTATTCGATTGAAGCGAGC 59.693 43.478 5.48 1.70 39.14 5.03
2133 3321 4.259970 CCAGTTGTATTCGATTGAAGCGAG 60.260 45.833 5.48 0.00 39.14 5.03
2134 3322 3.616821 CCAGTTGTATTCGATTGAAGCGA 59.383 43.478 0.00 0.00 37.57 4.93
2135 3323 3.785505 GCCAGTTGTATTCGATTGAAGCG 60.786 47.826 0.00 0.00 37.57 4.68
2136 3324 3.126858 TGCCAGTTGTATTCGATTGAAGC 59.873 43.478 1.10 0.00 37.57 3.86
2137 3325 4.631377 TCTGCCAGTTGTATTCGATTGAAG 59.369 41.667 1.10 0.00 37.57 3.02
2138 3326 4.391830 GTCTGCCAGTTGTATTCGATTGAA 59.608 41.667 0.00 0.00 38.76 2.69
2139 3327 3.932710 GTCTGCCAGTTGTATTCGATTGA 59.067 43.478 0.00 0.00 0.00 2.57
2140 3328 3.935203 AGTCTGCCAGTTGTATTCGATTG 59.065 43.478 0.00 0.00 0.00 2.67
2141 3329 4.207891 AGTCTGCCAGTTGTATTCGATT 57.792 40.909 0.00 0.00 0.00 3.34
2142 3330 3.895232 AGTCTGCCAGTTGTATTCGAT 57.105 42.857 0.00 0.00 0.00 3.59
2143 3331 3.678056 AAGTCTGCCAGTTGTATTCGA 57.322 42.857 0.00 0.00 0.00 3.71
2144 3332 4.495422 ACTAAGTCTGCCAGTTGTATTCG 58.505 43.478 0.00 0.00 0.00 3.34
2145 3333 6.803154 AAACTAAGTCTGCCAGTTGTATTC 57.197 37.500 0.00 0.00 32.96 1.75
2146 3334 7.937394 AGTTAAACTAAGTCTGCCAGTTGTATT 59.063 33.333 0.00 0.00 32.96 1.89
2147 3335 7.450903 AGTTAAACTAAGTCTGCCAGTTGTAT 58.549 34.615 0.00 0.00 32.96 2.29
2148 3336 6.823497 AGTTAAACTAAGTCTGCCAGTTGTA 58.177 36.000 0.00 0.00 32.96 2.41
2149 3337 5.681639 AGTTAAACTAAGTCTGCCAGTTGT 58.318 37.500 0.00 0.00 32.96 3.32
2150 3338 6.619801 AAGTTAAACTAAGTCTGCCAGTTG 57.380 37.500 0.00 0.00 32.96 3.16
2151 3339 6.459710 GCAAAGTTAAACTAAGTCTGCCAGTT 60.460 38.462 0.00 0.00 34.03 3.16
2152 3340 5.008712 GCAAAGTTAAACTAAGTCTGCCAGT 59.991 40.000 0.00 0.00 0.00 4.00
2153 3341 5.239525 AGCAAAGTTAAACTAAGTCTGCCAG 59.760 40.000 0.00 0.00 0.00 4.85
2154 3342 5.130350 AGCAAAGTTAAACTAAGTCTGCCA 58.870 37.500 0.00 0.00 0.00 4.92
2155 3343 5.690997 AGCAAAGTTAAACTAAGTCTGCC 57.309 39.130 0.00 0.00 0.00 4.85
2156 3344 6.790825 CGTTAGCAAAGTTAAACTAAGTCTGC 59.209 38.462 0.00 0.00 0.00 4.26
2157 3345 7.170320 TCCGTTAGCAAAGTTAAACTAAGTCTG 59.830 37.037 0.00 0.00 0.00 3.51
2158 3346 7.212274 TCCGTTAGCAAAGTTAAACTAAGTCT 58.788 34.615 0.00 0.00 0.00 3.24
2159 3347 7.412137 TCCGTTAGCAAAGTTAAACTAAGTC 57.588 36.000 0.00 0.00 0.00 3.01
2160 3348 7.658575 TCATCCGTTAGCAAAGTTAAACTAAGT 59.341 33.333 0.00 0.00 0.00 2.24
2161 3349 8.025243 TCATCCGTTAGCAAAGTTAAACTAAG 57.975 34.615 0.00 0.00 0.00 2.18
2162 3350 7.966246 TCATCCGTTAGCAAAGTTAAACTAA 57.034 32.000 0.00 0.00 0.00 2.24
2163 3351 7.441760 TGTTCATCCGTTAGCAAAGTTAAACTA 59.558 33.333 0.00 0.00 0.00 2.24
2164 3352 6.261381 TGTTCATCCGTTAGCAAAGTTAAACT 59.739 34.615 0.00 0.00 0.00 2.66
2165 3353 6.432107 TGTTCATCCGTTAGCAAAGTTAAAC 58.568 36.000 0.00 0.00 0.00 2.01
2166 3354 6.621316 TGTTCATCCGTTAGCAAAGTTAAA 57.379 33.333 0.00 0.00 0.00 1.52
2167 3355 6.483974 TCTTGTTCATCCGTTAGCAAAGTTAA 59.516 34.615 0.00 0.00 0.00 2.01
2168 3356 5.992829 TCTTGTTCATCCGTTAGCAAAGTTA 59.007 36.000 0.00 0.00 0.00 2.24
2169 3357 4.819630 TCTTGTTCATCCGTTAGCAAAGTT 59.180 37.500 0.00 0.00 0.00 2.66
2170 3358 4.385825 TCTTGTTCATCCGTTAGCAAAGT 58.614 39.130 0.00 0.00 0.00 2.66
2171 3359 5.551760 ATCTTGTTCATCCGTTAGCAAAG 57.448 39.130 0.00 0.00 0.00 2.77
2172 3360 7.766738 TGTATATCTTGTTCATCCGTTAGCAAA 59.233 33.333 0.00 0.00 0.00 3.68
2173 3361 7.269316 TGTATATCTTGTTCATCCGTTAGCAA 58.731 34.615 0.00 0.00 0.00 3.91
2174 3362 6.811954 TGTATATCTTGTTCATCCGTTAGCA 58.188 36.000 0.00 0.00 0.00 3.49
2175 3363 7.709269 TTGTATATCTTGTTCATCCGTTAGC 57.291 36.000 0.00 0.00 0.00 3.09
2212 3400 9.934190 GCACAGTGAATTATTTTGTGAAATTTT 57.066 25.926 4.15 0.00 41.12 1.82
2213 3401 9.107177 TGCACAGTGAATTATTTTGTGAAATTT 57.893 25.926 4.15 0.00 41.12 1.82
2214 3402 8.659925 TGCACAGTGAATTATTTTGTGAAATT 57.340 26.923 4.15 0.00 41.12 1.82
2215 3403 8.659925 TTGCACAGTGAATTATTTTGTGAAAT 57.340 26.923 4.15 0.00 41.12 2.17
2216 3404 8.484641 TTTGCACAGTGAATTATTTTGTGAAA 57.515 26.923 4.15 11.97 41.12 2.69
2217 3405 8.659925 ATTTGCACAGTGAATTATTTTGTGAA 57.340 26.923 4.15 7.95 41.12 3.18
2218 3406 9.755804 TTATTTGCACAGTGAATTATTTTGTGA 57.244 25.926 4.15 3.23 41.12 3.58
2223 3411 9.218440 CCCTTTTATTTGCACAGTGAATTATTT 57.782 29.630 4.15 0.00 0.00 1.40
2224 3412 8.592809 TCCCTTTTATTTGCACAGTGAATTATT 58.407 29.630 4.15 0.00 0.00 1.40
2225 3413 8.133024 TCCCTTTTATTTGCACAGTGAATTAT 57.867 30.769 4.15 0.00 0.00 1.28
2226 3414 7.531857 TCCCTTTTATTTGCACAGTGAATTA 57.468 32.000 4.15 0.00 0.00 1.40
2227 3415 6.418057 TCCCTTTTATTTGCACAGTGAATT 57.582 33.333 4.15 0.00 0.00 2.17
2228 3416 6.418057 TTCCCTTTTATTTGCACAGTGAAT 57.582 33.333 4.15 0.00 0.00 2.57
2229 3417 5.860941 TTCCCTTTTATTTGCACAGTGAA 57.139 34.783 4.15 0.00 0.00 3.18
2230 3418 5.538053 TCATTCCCTTTTATTTGCACAGTGA 59.462 36.000 4.15 0.00 0.00 3.41
2231 3419 5.782047 TCATTCCCTTTTATTTGCACAGTG 58.218 37.500 0.00 0.00 0.00 3.66
2232 3420 6.211184 TCATCATTCCCTTTTATTTGCACAGT 59.789 34.615 0.00 0.00 0.00 3.55
2233 3421 6.632909 TCATCATTCCCTTTTATTTGCACAG 58.367 36.000 0.00 0.00 0.00 3.66
2234 3422 6.602410 TCATCATTCCCTTTTATTTGCACA 57.398 33.333 0.00 0.00 0.00 4.57
2235 3423 7.322664 TCTTCATCATTCCCTTTTATTTGCAC 58.677 34.615 0.00 0.00 0.00 4.57
2236 3424 7.479352 TCTTCATCATTCCCTTTTATTTGCA 57.521 32.000 0.00 0.00 0.00 4.08
2237 3425 7.818930 TGTTCTTCATCATTCCCTTTTATTTGC 59.181 33.333 0.00 0.00 0.00 3.68
2238 3426 9.880157 ATGTTCTTCATCATTCCCTTTTATTTG 57.120 29.630 0.00 0.00 29.76 2.32
2239 3427 9.880157 CATGTTCTTCATCATTCCCTTTTATTT 57.120 29.630 0.00 0.00 34.09 1.40
2240 3428 9.258629 TCATGTTCTTCATCATTCCCTTTTATT 57.741 29.630 0.00 0.00 34.09 1.40
2241 3429 8.827832 TCATGTTCTTCATCATTCCCTTTTAT 57.172 30.769 0.00 0.00 34.09 1.40
2242 3430 8.108999 TCTCATGTTCTTCATCATTCCCTTTTA 58.891 33.333 0.00 0.00 34.09 1.52
2243 3431 6.950041 TCTCATGTTCTTCATCATTCCCTTTT 59.050 34.615 0.00 0.00 34.09 2.27
2244 3432 6.487828 TCTCATGTTCTTCATCATTCCCTTT 58.512 36.000 0.00 0.00 34.09 3.11
2245 3433 6.070951 TCTCATGTTCTTCATCATTCCCTT 57.929 37.500 0.00 0.00 34.09 3.95
2246 3434 5.705397 TCTCATGTTCTTCATCATTCCCT 57.295 39.130 0.00 0.00 34.09 4.20
2247 3435 6.764308 TTTCTCATGTTCTTCATCATTCCC 57.236 37.500 0.00 0.00 34.09 3.97
2251 3439 9.798994 GCTTATTTTTCTCATGTTCTTCATCAT 57.201 29.630 0.00 0.00 34.09 2.45
2252 3440 8.795513 TGCTTATTTTTCTCATGTTCTTCATCA 58.204 29.630 0.00 0.00 34.09 3.07
2253 3441 9.630098 TTGCTTATTTTTCTCATGTTCTTCATC 57.370 29.630 0.00 0.00 34.09 2.92
2254 3442 9.415544 GTTGCTTATTTTTCTCATGTTCTTCAT 57.584 29.630 0.00 0.00 37.22 2.57
2255 3443 8.412456 TGTTGCTTATTTTTCTCATGTTCTTCA 58.588 29.630 0.00 0.00 0.00 3.02
2256 3444 8.801715 TGTTGCTTATTTTTCTCATGTTCTTC 57.198 30.769 0.00 0.00 0.00 2.87
2257 3445 9.199982 CATGTTGCTTATTTTTCTCATGTTCTT 57.800 29.630 0.00 0.00 0.00 2.52
2258 3446 8.579006 TCATGTTGCTTATTTTTCTCATGTTCT 58.421 29.630 0.00 0.00 34.82 3.01
2259 3447 8.746922 TCATGTTGCTTATTTTTCTCATGTTC 57.253 30.769 0.00 0.00 34.82 3.18
2260 3448 8.579006 TCTCATGTTGCTTATTTTTCTCATGTT 58.421 29.630 0.00 0.00 34.82 2.71
2261 3449 8.114331 TCTCATGTTGCTTATTTTTCTCATGT 57.886 30.769 0.00 0.00 34.82 3.21
2262 3450 8.975410 TTCTCATGTTGCTTATTTTTCTCATG 57.025 30.769 0.00 0.00 34.62 3.07
2263 3451 9.985730 TTTTCTCATGTTGCTTATTTTTCTCAT 57.014 25.926 0.00 0.00 0.00 2.90
2264 3452 9.985730 ATTTTCTCATGTTGCTTATTTTTCTCA 57.014 25.926 0.00 0.00 0.00 3.27
2270 3458 9.023967 GCGATTATTTTCTCATGTTGCTTATTT 57.976 29.630 0.00 0.00 0.00 1.40
2271 3459 8.190122 TGCGATTATTTTCTCATGTTGCTTATT 58.810 29.630 0.00 0.00 0.00 1.40
2272 3460 7.706159 TGCGATTATTTTCTCATGTTGCTTAT 58.294 30.769 0.00 0.00 0.00 1.73
2273 3461 7.082700 TGCGATTATTTTCTCATGTTGCTTA 57.917 32.000 0.00 0.00 0.00 3.09
2274 3462 5.953183 TGCGATTATTTTCTCATGTTGCTT 58.047 33.333 0.00 0.00 0.00 3.91
2275 3463 5.565592 TGCGATTATTTTCTCATGTTGCT 57.434 34.783 0.00 0.00 0.00 3.91
2276 3464 5.801947 AGTTGCGATTATTTTCTCATGTTGC 59.198 36.000 0.00 0.00 0.00 4.17
2277 3465 6.252015 CCAGTTGCGATTATTTTCTCATGTTG 59.748 38.462 0.00 0.00 0.00 3.33
2278 3466 6.150976 TCCAGTTGCGATTATTTTCTCATGTT 59.849 34.615 0.00 0.00 0.00 2.71
2279 3467 5.647658 TCCAGTTGCGATTATTTTCTCATGT 59.352 36.000 0.00 0.00 0.00 3.21
2280 3468 6.122850 TCCAGTTGCGATTATTTTCTCATG 57.877 37.500 0.00 0.00 0.00 3.07
2281 3469 6.404734 GGTTCCAGTTGCGATTATTTTCTCAT 60.405 38.462 0.00 0.00 0.00 2.90
2282 3470 5.106317 GGTTCCAGTTGCGATTATTTTCTCA 60.106 40.000 0.00 0.00 0.00 3.27
2283 3471 5.123979 AGGTTCCAGTTGCGATTATTTTCTC 59.876 40.000 0.00 0.00 0.00 2.87
2284 3472 5.010282 AGGTTCCAGTTGCGATTATTTTCT 58.990 37.500 0.00 0.00 0.00 2.52
2285 3473 5.310720 AGGTTCCAGTTGCGATTATTTTC 57.689 39.130 0.00 0.00 0.00 2.29
2286 3474 6.177610 TCTAGGTTCCAGTTGCGATTATTTT 58.822 36.000 0.00 0.00 0.00 1.82
2287 3475 5.741011 TCTAGGTTCCAGTTGCGATTATTT 58.259 37.500 0.00 0.00 0.00 1.40
2288 3476 5.104900 ACTCTAGGTTCCAGTTGCGATTATT 60.105 40.000 0.00 0.00 0.00 1.40
2289 3477 4.406003 ACTCTAGGTTCCAGTTGCGATTAT 59.594 41.667 0.00 0.00 0.00 1.28
2290 3478 3.767673 ACTCTAGGTTCCAGTTGCGATTA 59.232 43.478 0.00 0.00 0.00 1.75
2291 3479 2.567615 ACTCTAGGTTCCAGTTGCGATT 59.432 45.455 0.00 0.00 0.00 3.34
2292 3480 2.180276 ACTCTAGGTTCCAGTTGCGAT 58.820 47.619 0.00 0.00 0.00 4.58
2293 3481 1.629043 ACTCTAGGTTCCAGTTGCGA 58.371 50.000 0.00 0.00 0.00 5.10
2294 3482 2.338500 GAACTCTAGGTTCCAGTTGCG 58.662 52.381 11.11 0.00 46.17 4.85
2337 3525 9.362539 GTGCAGAATGAAACATTTTTATCTGAT 57.637 29.630 13.98 0.00 39.69 2.90
2338 3526 8.358895 TGTGCAGAATGAAACATTTTTATCTGA 58.641 29.630 13.98 0.00 39.69 3.27
2339 3527 8.523523 TGTGCAGAATGAAACATTTTTATCTG 57.476 30.769 0.00 8.70 39.69 2.90
2340 3528 7.816031 CCTGTGCAGAATGAAACATTTTTATCT 59.184 33.333 0.02 0.00 39.69 1.98
2341 3529 7.063780 CCCTGTGCAGAATGAAACATTTTTATC 59.936 37.037 0.02 0.00 39.69 1.75
2342 3530 6.875195 CCCTGTGCAGAATGAAACATTTTTAT 59.125 34.615 0.02 0.00 39.69 1.40
2343 3531 6.222389 CCCTGTGCAGAATGAAACATTTTTA 58.778 36.000 0.02 0.00 39.69 1.52
2344 3532 5.058490 CCCTGTGCAGAATGAAACATTTTT 58.942 37.500 0.02 0.00 39.69 1.94
2345 3533 4.503643 CCCCTGTGCAGAATGAAACATTTT 60.504 41.667 0.02 0.00 39.69 1.82
2346 3534 3.007182 CCCCTGTGCAGAATGAAACATTT 59.993 43.478 0.02 0.00 39.69 2.32
2347 3535 2.564062 CCCCTGTGCAGAATGAAACATT 59.436 45.455 0.02 0.00 39.69 2.71
2348 3536 2.173519 CCCCTGTGCAGAATGAAACAT 58.826 47.619 0.02 0.00 39.69 2.71
2349 3537 1.133513 ACCCCTGTGCAGAATGAAACA 60.134 47.619 0.02 0.00 39.69 2.83
2350 3538 1.541588 GACCCCTGTGCAGAATGAAAC 59.458 52.381 0.02 0.00 39.69 2.78
2351 3539 1.547675 GGACCCCTGTGCAGAATGAAA 60.548 52.381 0.02 0.00 39.69 2.69
2352 3540 0.038166 GGACCCCTGTGCAGAATGAA 59.962 55.000 0.02 0.00 39.69 2.57
2353 3541 1.133181 TGGACCCCTGTGCAGAATGA 61.133 55.000 0.02 0.00 37.97 2.57
2354 3542 0.251297 TTGGACCCCTGTGCAGAATG 60.251 55.000 0.02 0.00 44.11 2.67
2355 3543 0.482446 TTTGGACCCCTGTGCAGAAT 59.518 50.000 0.02 0.00 44.11 2.40
2356 3544 0.467290 GTTTGGACCCCTGTGCAGAA 60.467 55.000 0.02 0.00 44.11 3.02
2357 3545 1.150536 GTTTGGACCCCTGTGCAGA 59.849 57.895 0.02 0.00 44.11 4.26
2358 3546 1.903404 GGTTTGGACCCCTGTGCAG 60.903 63.158 0.00 0.00 44.11 4.41
2359 3547 2.197324 GGTTTGGACCCCTGTGCA 59.803 61.111 0.00 0.00 41.49 4.57
2360 3548 2.983592 CGGTTTGGACCCCTGTGC 60.984 66.667 0.00 0.00 43.42 4.57
2361 3549 1.896660 CACGGTTTGGACCCCTGTG 60.897 63.158 0.00 0.00 43.42 3.66
2362 3550 2.513895 CACGGTTTGGACCCCTGT 59.486 61.111 0.00 0.00 43.42 4.00
2363 3551 2.983592 GCACGGTTTGGACCCCTG 60.984 66.667 0.00 0.00 43.42 4.45
2364 3552 3.494254 TGCACGGTTTGGACCCCT 61.494 61.111 0.00 0.00 43.42 4.79
2365 3553 3.292159 GTGCACGGTTTGGACCCC 61.292 66.667 0.00 0.00 43.42 4.95
2368 3556 1.021968 AAAGAGTGCACGGTTTGGAC 58.978 50.000 12.01 0.00 46.72 4.02
2369 3557 1.757682 AAAAGAGTGCACGGTTTGGA 58.242 45.000 17.02 0.00 0.00 3.53
2370 3558 3.314080 TCTTAAAAGAGTGCACGGTTTGG 59.686 43.478 17.02 12.54 0.00 3.28
2371 3559 4.279659 GTCTTAAAAGAGTGCACGGTTTG 58.720 43.478 17.02 7.86 35.32 2.93
2372 3560 3.314357 GGTCTTAAAAGAGTGCACGGTTT 59.686 43.478 12.01 14.66 35.32 3.27
2373 3561 2.876550 GGTCTTAAAAGAGTGCACGGTT 59.123 45.455 12.01 6.03 35.32 4.44
2374 3562 2.104281 AGGTCTTAAAAGAGTGCACGGT 59.896 45.455 12.01 0.00 35.32 4.83
2375 3563 2.480419 CAGGTCTTAAAAGAGTGCACGG 59.520 50.000 12.01 0.00 35.32 4.94
2376 3564 2.480419 CCAGGTCTTAAAAGAGTGCACG 59.520 50.000 12.01 0.00 35.32 5.34
2377 3565 2.814336 CCCAGGTCTTAAAAGAGTGCAC 59.186 50.000 9.40 9.40 35.32 4.57
2378 3566 2.441750 ACCCAGGTCTTAAAAGAGTGCA 59.558 45.455 0.00 0.00 35.32 4.57
2379 3567 3.141767 ACCCAGGTCTTAAAAGAGTGC 57.858 47.619 0.00 0.00 35.32 4.40
2380 3568 4.254492 GCTACCCAGGTCTTAAAAGAGTG 58.746 47.826 0.00 0.00 35.32 3.51
2381 3569 3.056035 CGCTACCCAGGTCTTAAAAGAGT 60.056 47.826 0.00 0.00 35.32 3.24
2382 3570 3.194968 TCGCTACCCAGGTCTTAAAAGAG 59.805 47.826 0.00 0.00 35.32 2.85
2383 3571 3.167485 TCGCTACCCAGGTCTTAAAAGA 58.833 45.455 0.00 0.00 0.00 2.52
2384 3572 3.194968 TCTCGCTACCCAGGTCTTAAAAG 59.805 47.826 0.00 0.00 0.00 2.27
2385 3573 3.167485 TCTCGCTACCCAGGTCTTAAAA 58.833 45.455 0.00 0.00 0.00 1.52
2386 3574 2.811410 TCTCGCTACCCAGGTCTTAAA 58.189 47.619 0.00 0.00 0.00 1.52
2387 3575 2.519771 TCTCGCTACCCAGGTCTTAA 57.480 50.000 0.00 0.00 0.00 1.85
2388 3576 2.519771 TTCTCGCTACCCAGGTCTTA 57.480 50.000 0.00 0.00 0.00 2.10
2389 3577 1.550976 CTTTCTCGCTACCCAGGTCTT 59.449 52.381 0.00 0.00 0.00 3.01
2390 3578 1.187087 CTTTCTCGCTACCCAGGTCT 58.813 55.000 0.00 0.00 0.00 3.85
2391 3579 1.183549 TCTTTCTCGCTACCCAGGTC 58.816 55.000 0.00 0.00 0.00 3.85
2392 3580 1.550976 CTTCTTTCTCGCTACCCAGGT 59.449 52.381 0.00 0.00 0.00 4.00
2393 3581 1.825474 TCTTCTTTCTCGCTACCCAGG 59.175 52.381 0.00 0.00 0.00 4.45
2394 3582 2.494073 AGTCTTCTTTCTCGCTACCCAG 59.506 50.000 0.00 0.00 0.00 4.45
2395 3583 2.526432 AGTCTTCTTTCTCGCTACCCA 58.474 47.619 0.00 0.00 0.00 4.51
2396 3584 4.715527 TTAGTCTTCTTTCTCGCTACCC 57.284 45.455 0.00 0.00 0.00 3.69
2397 3585 5.520649 CCAATTAGTCTTCTTTCTCGCTACC 59.479 44.000 0.00 0.00 0.00 3.18
2398 3586 6.331061 TCCAATTAGTCTTCTTTCTCGCTAC 58.669 40.000 0.00 0.00 0.00 3.58
2399 3587 6.377429 TCTCCAATTAGTCTTCTTTCTCGCTA 59.623 38.462 0.00 0.00 0.00 4.26
2400 3588 5.186021 TCTCCAATTAGTCTTCTTTCTCGCT 59.814 40.000 0.00 0.00 0.00 4.93
2401 3589 5.411781 TCTCCAATTAGTCTTCTTTCTCGC 58.588 41.667 0.00 0.00 0.00 5.03
2402 3590 9.757227 ATTATCTCCAATTAGTCTTCTTTCTCG 57.243 33.333 0.00 0.00 0.00 4.04
2411 3599 9.829507 CTCAACTCAATTATCTCCAATTAGTCT 57.170 33.333 0.00 0.00 0.00 3.24
2412 3600 8.555361 GCTCAACTCAATTATCTCCAATTAGTC 58.445 37.037 0.00 0.00 0.00 2.59
2413 3601 8.270744 AGCTCAACTCAATTATCTCCAATTAGT 58.729 33.333 0.00 0.00 0.00 2.24
2414 3602 8.674263 AGCTCAACTCAATTATCTCCAATTAG 57.326 34.615 0.00 0.00 0.00 1.73
2415 3603 9.113838 GAAGCTCAACTCAATTATCTCCAATTA 57.886 33.333 0.00 0.00 0.00 1.40
2416 3604 7.613022 TGAAGCTCAACTCAATTATCTCCAATT 59.387 33.333 0.00 0.00 0.00 2.32
2417 3605 7.114754 TGAAGCTCAACTCAATTATCTCCAAT 58.885 34.615 0.00 0.00 0.00 3.16
2418 3606 6.475504 TGAAGCTCAACTCAATTATCTCCAA 58.524 36.000 0.00 0.00 0.00 3.53
2419 3607 6.053632 TGAAGCTCAACTCAATTATCTCCA 57.946 37.500 0.00 0.00 0.00 3.86
2420 3608 5.526846 CCTGAAGCTCAACTCAATTATCTCC 59.473 44.000 0.00 0.00 0.00 3.71
2421 3609 5.526846 CCCTGAAGCTCAACTCAATTATCTC 59.473 44.000 0.00 0.00 0.00 2.75
2422 3610 5.190528 TCCCTGAAGCTCAACTCAATTATCT 59.809 40.000 0.00 0.00 0.00 1.98
2423 3611 5.431765 TCCCTGAAGCTCAACTCAATTATC 58.568 41.667 0.00 0.00 0.00 1.75
2424 3612 5.441718 TCCCTGAAGCTCAACTCAATTAT 57.558 39.130 0.00 0.00 0.00 1.28
2425 3613 4.908601 TCCCTGAAGCTCAACTCAATTA 57.091 40.909 0.00 0.00 0.00 1.40
2426 3614 3.795688 TCCCTGAAGCTCAACTCAATT 57.204 42.857 0.00 0.00 0.00 2.32
2427 3615 3.795688 TTCCCTGAAGCTCAACTCAAT 57.204 42.857 0.00 0.00 0.00 2.57
2428 3616 3.795688 ATTCCCTGAAGCTCAACTCAA 57.204 42.857 0.00 0.00 0.00 3.02
2429 3617 4.287067 ACTTATTCCCTGAAGCTCAACTCA 59.713 41.667 0.00 0.00 0.00 3.41
2430 3618 4.837972 ACTTATTCCCTGAAGCTCAACTC 58.162 43.478 0.00 0.00 0.00 3.01
2431 3619 4.917906 ACTTATTCCCTGAAGCTCAACT 57.082 40.909 0.00 0.00 0.00 3.16
2432 3620 7.631717 AAATACTTATTCCCTGAAGCTCAAC 57.368 36.000 0.00 0.00 0.00 3.18
2433 3621 7.993183 CCTAAATACTTATTCCCTGAAGCTCAA 59.007 37.037 0.00 0.00 0.00 3.02
2434 3622 7.420214 CCCTAAATACTTATTCCCTGAAGCTCA 60.420 40.741 0.00 0.00 0.00 4.26
2435 3623 6.937465 CCCTAAATACTTATTCCCTGAAGCTC 59.063 42.308 0.00 0.00 0.00 4.09
2436 3624 6.619852 TCCCTAAATACTTATTCCCTGAAGCT 59.380 38.462 0.00 0.00 0.00 3.74
2437 3625 6.838382 TCCCTAAATACTTATTCCCTGAAGC 58.162 40.000 0.00 0.00 0.00 3.86
2438 3626 8.263854 TCTCCCTAAATACTTATTCCCTGAAG 57.736 38.462 0.00 0.00 0.00 3.02
2439 3627 8.491958 GTTCTCCCTAAATACTTATTCCCTGAA 58.508 37.037 0.00 0.00 0.00 3.02
2440 3628 7.626084 TGTTCTCCCTAAATACTTATTCCCTGA 59.374 37.037 0.00 0.00 0.00 3.86
2441 3629 7.802117 TGTTCTCCCTAAATACTTATTCCCTG 58.198 38.462 0.00 0.00 0.00 4.45
2442 3630 8.440771 CATGTTCTCCCTAAATACTTATTCCCT 58.559 37.037 0.00 0.00 0.00 4.20
2443 3631 8.437575 TCATGTTCTCCCTAAATACTTATTCCC 58.562 37.037 0.00 0.00 0.00 3.97
2444 3632 9.495572 CTCATGTTCTCCCTAAATACTTATTCC 57.504 37.037 0.00 0.00 0.00 3.01
2445 3633 8.994170 GCTCATGTTCTCCCTAAATACTTATTC 58.006 37.037 0.00 0.00 0.00 1.75
2446 3634 8.718656 AGCTCATGTTCTCCCTAAATACTTATT 58.281 33.333 0.00 0.00 0.00 1.40
2447 3635 8.268878 AGCTCATGTTCTCCCTAAATACTTAT 57.731 34.615 0.00 0.00 0.00 1.73
2448 3636 7.565398 AGAGCTCATGTTCTCCCTAAATACTTA 59.435 37.037 17.77 0.00 0.00 2.24
2449 3637 6.385467 AGAGCTCATGTTCTCCCTAAATACTT 59.615 38.462 17.77 0.00 0.00 2.24
2450 3638 5.902431 AGAGCTCATGTTCTCCCTAAATACT 59.098 40.000 17.77 0.00 0.00 2.12
2451 3639 6.168270 AGAGCTCATGTTCTCCCTAAATAC 57.832 41.667 17.77 0.00 0.00 1.89
2452 3640 6.412362 GAGAGCTCATGTTCTCCCTAAATA 57.588 41.667 17.77 0.00 42.39 1.40
2453 3641 5.289083 GAGAGCTCATGTTCTCCCTAAAT 57.711 43.478 17.77 0.00 42.39 1.40
2454 3642 4.744795 GAGAGCTCATGTTCTCCCTAAA 57.255 45.455 17.77 0.00 42.39 1.85
2472 3660 1.930251 AGTGGCTAAGCACTGAGAGA 58.070 50.000 0.00 0.00 0.00 3.10
2564 4965 3.880490 TGTAGCAGTGTCCGTTTTTGATT 59.120 39.130 0.00 0.00 0.00 2.57
2610 8382 1.153353 CTGAATTAACACGCGGTGGT 58.847 50.000 12.47 7.83 37.94 4.16
2612 8384 1.724654 GCACTGAATTAACACGCGGTG 60.725 52.381 12.47 9.20 39.88 4.94
2617 8389 1.529226 TGGGGCACTGAATTAACACG 58.471 50.000 0.00 0.00 0.00 4.49
2618 8390 2.166254 CCATGGGGCACTGAATTAACAC 59.834 50.000 2.85 0.00 0.00 3.32
2619 8391 2.042297 TCCATGGGGCACTGAATTAACA 59.958 45.455 13.02 0.00 0.00 2.41
2636 8408 2.555732 ATGACCAAAATGCCCTCCAT 57.444 45.000 0.00 0.00 35.06 3.41
2638 8410 2.093500 GGAAATGACCAAAATGCCCTCC 60.093 50.000 0.00 0.00 0.00 4.30
2644 8416 2.288702 TGCACGGGAAATGACCAAAATG 60.289 45.455 0.00 0.00 0.00 2.32
2659 8431 1.604438 GCCCTTTAAAAACCTGCACGG 60.604 52.381 1.16 1.16 39.35 4.94
2660 8432 1.067821 TGCCCTTTAAAAACCTGCACG 59.932 47.619 0.00 0.00 0.00 5.34
2661 8433 2.754472 CTGCCCTTTAAAAACCTGCAC 58.246 47.619 0.00 0.00 0.00 4.57
2662 8434 1.069978 GCTGCCCTTTAAAAACCTGCA 59.930 47.619 0.00 0.00 0.00 4.41
2663 8435 1.608025 GGCTGCCCTTTAAAAACCTGC 60.608 52.381 7.66 0.00 0.00 4.85
2664 8436 1.336795 CGGCTGCCCTTTAAAAACCTG 60.337 52.381 14.12 0.00 0.00 4.00
2665 8437 0.966179 CGGCTGCCCTTTAAAAACCT 59.034 50.000 14.12 0.00 0.00 3.50
2666 8438 0.669318 GCGGCTGCCCTTTAAAAACC 60.669 55.000 14.12 0.00 33.98 3.27
2667 8439 0.317160 AGCGGCTGCCCTTTAAAAAC 59.683 50.000 15.55 0.00 44.31 2.43
2668 8440 0.601057 GAGCGGCTGCCCTTTAAAAA 59.399 50.000 15.55 0.00 44.31 1.94
2669 8441 2.263153 GAGCGGCTGCCCTTTAAAA 58.737 52.632 15.55 0.00 44.31 1.52
2670 8442 3.996614 GAGCGGCTGCCCTTTAAA 58.003 55.556 15.55 0.00 44.31 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.