Multiple sequence alignment - TraesCS2D01G404300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G404300 chr2D 100.000 6904 0 0 1 6904 518800626 518807529 0.000000e+00 12750.0
1 TraesCS2D01G404300 chr2D 94.848 1087 41 11 1862 2941 536488357 536487279 0.000000e+00 1683.0
2 TraesCS2D01G404300 chr2D 94.359 1099 42 13 1850 2941 2671061 2672146 0.000000e+00 1668.0
3 TraesCS2D01G404300 chr2D 94.805 1078 39 12 1864 2935 606758425 606757359 0.000000e+00 1664.0
4 TraesCS2D01G404300 chr2D 94.161 1079 48 12 1863 2934 471449934 471448864 0.000000e+00 1629.0
5 TraesCS2D01G404300 chr2D 94.958 119 6 0 2813 2931 36545812 36545694 3.290000e-43 187.0
6 TraesCS2D01G404300 chr2D 96.512 86 3 0 3585 3670 302248013 302248098 7.220000e-30 143.0
7 TraesCS2D01G404300 chr2D 96.512 86 3 0 3585 3670 382455940 382456025 7.220000e-30 143.0
8 TraesCS2D01G404300 chr2D 88.889 108 8 4 3573 3677 81298185 81298291 5.620000e-26 130.0
9 TraesCS2D01G404300 chr2A 96.152 2079 65 6 4832 6904 662964674 662966743 0.000000e+00 3382.0
10 TraesCS2D01G404300 chr2A 97.401 808 18 3 3990 4795 662963870 662964676 0.000000e+00 1373.0
11 TraesCS2D01G404300 chr2A 93.577 794 24 2 870 1637 662961757 662962549 0.000000e+00 1158.0
12 TraesCS2D01G404300 chr2A 94.737 665 24 1 2934 3587 662962944 662963608 0.000000e+00 1024.0
13 TraesCS2D01G404300 chr2A 87.282 802 71 17 1 798 662936355 662937129 0.000000e+00 887.0
14 TraesCS2D01G404300 chr2A 94.275 262 11 2 3668 3925 662963606 662963867 1.400000e-106 398.0
15 TraesCS2D01G404300 chr2A 91.071 280 25 0 1214 1493 107979028 107978749 5.050000e-101 379.0
16 TraesCS2D01G404300 chr2A 88.841 233 20 5 1632 1863 662962724 662962951 1.470000e-71 281.0
17 TraesCS2D01G404300 chr2A 92.982 57 3 1 3911 3966 725253719 725253775 1.600000e-11 82.4
18 TraesCS2D01G404300 chr2B 96.224 1324 44 2 4838 6160 611061444 611062762 0.000000e+00 2163.0
19 TraesCS2D01G404300 chr2B 90.814 1633 107 14 10 1637 611055648 611057242 0.000000e+00 2145.0
20 TraesCS2D01G404300 chr2B 95.338 622 26 2 2934 3555 611057655 611058273 0.000000e+00 985.0
21 TraesCS2D01G404300 chr2B 96.589 557 12 5 6353 6903 611063076 611063631 0.000000e+00 917.0
22 TraesCS2D01G404300 chr2B 93.934 544 23 4 3990 4524 611058590 611059132 0.000000e+00 813.0
23 TraesCS2D01G404300 chr2B 95.208 313 11 2 4515 4827 611059238 611059546 6.220000e-135 492.0
24 TraesCS2D01G404300 chr2B 88.441 372 26 7 2565 2936 550998565 550998211 3.820000e-117 433.0
25 TraesCS2D01G404300 chr2B 94.656 262 10 2 3668 3925 611058326 611058587 3.000000e-108 403.0
26 TraesCS2D01G404300 chr2B 91.103 281 24 1 1214 1493 786081580 786081300 5.050000e-101 379.0
27 TraesCS2D01G404300 chr2B 91.667 240 12 2 1632 1863 611057423 611057662 6.680000e-85 326.0
28 TraesCS2D01G404300 chr2B 93.038 158 10 1 6156 6312 611062820 611062977 5.390000e-56 230.0
29 TraesCS2D01G404300 chr2B 76.857 350 35 26 6434 6773 612080398 612080085 9.270000e-34 156.0
30 TraesCS2D01G404300 chr2B 77.492 311 32 21 6465 6773 612074043 612073769 1.200000e-32 152.0
31 TraesCS2D01G404300 chr2B 89.247 93 8 2 5263 5355 612081247 612081157 1.570000e-21 115.0
32 TraesCS2D01G404300 chr2B 96.226 53 2 0 6300 6352 611062997 611063049 3.430000e-13 87.9
33 TraesCS2D01G404300 chr2B 89.706 68 3 2 3921 3987 789965991 789966055 4.440000e-12 84.2
34 TraesCS2D01G404300 chr3D 95.357 1077 37 10 1864 2934 541302262 541301193 0.000000e+00 1700.0
35 TraesCS2D01G404300 chr3D 95.455 88 4 0 3585 3672 429097593 429097506 2.600000e-29 141.0
36 TraesCS2D01G404300 chr3D 91.176 102 8 1 3569 3670 197182403 197182303 3.360000e-28 137.0
37 TraesCS2D01G404300 chr3D 91.753 97 6 2 3578 3673 27936563 27936658 4.340000e-27 134.0
38 TraesCS2D01G404300 chr7D 94.359 1099 41 13 1856 2943 32158537 32157449 0.000000e+00 1666.0
39 TraesCS2D01G404300 chr7D 94.262 1063 47 13 1892 2946 413131131 413132187 0.000000e+00 1613.0
40 TraesCS2D01G404300 chr7D 92.929 99 6 1 3573 3671 540570413 540570510 7.220000e-30 143.0
41 TraesCS2D01G404300 chr7D 95.402 87 4 0 3585 3671 632404680 632404594 9.340000e-29 139.0
42 TraesCS2D01G404300 chr1D 94.183 1083 48 11 1864 2940 412789195 412788122 0.000000e+00 1637.0
43 TraesCS2D01G404300 chr1D 94.009 1085 45 16 1864 2940 412662825 412661753 0.000000e+00 1626.0
44 TraesCS2D01G404300 chr1D 92.929 99 6 1 3573 3671 469154012 469153915 7.220000e-30 143.0
45 TraesCS2D01G404300 chr1D 94.444 90 3 2 3580 3669 263868012 263867925 3.360000e-28 137.0
46 TraesCS2D01G404300 chr1D 93.478 92 5 1 3585 3675 29891900 29891809 1.210000e-27 135.0
47 TraesCS2D01G404300 chr1D 94.382 89 4 1 3581 3669 209139274 209139361 1.210000e-27 135.0
48 TraesCS2D01G404300 chr1D 88.889 108 10 2 3566 3671 250421643 250421750 1.560000e-26 132.0
49 TraesCS2D01G404300 chr1D 96.875 64 1 1 3925 3987 413583577 413583640 9.470000e-19 106.0
50 TraesCS2D01G404300 chr1D 92.424 66 4 1 3923 3987 426909662 426909727 7.370000e-15 93.5
51 TraesCS2D01G404300 chr1D 94.118 51 2 1 3920 3969 192810007 192809957 7.430000e-10 76.8
52 TraesCS2D01G404300 chr1D 89.231 65 1 2 3924 3987 201373354 201373413 7.430000e-10 76.8
53 TraesCS2D01G404300 chr3B 89.165 443 31 9 2467 2908 9921632 9921206 2.830000e-148 536.0
54 TraesCS2D01G404300 chr3B 82.121 330 47 9 2608 2933 726377748 726378069 8.820000e-69 272.0
55 TraesCS2D01G404300 chr3B 93.750 96 4 2 3578 3673 527239938 527240031 7.220000e-30 143.0
56 TraesCS2D01G404300 chr3B 88.312 77 4 2 3920 3991 46266050 46266126 3.430000e-13 87.9
57 TraesCS2D01G404300 chr1B 83.929 280 26 3 1214 1493 44060635 44060895 4.130000e-62 250.0
58 TraesCS2D01G404300 chr1B 92.308 169 13 0 1325 1493 44055633 44055801 2.490000e-59 241.0
59 TraesCS2D01G404300 chr1B 92.929 99 5 2 3585 3681 406341846 406341748 7.220000e-30 143.0
60 TraesCS2D01G404300 chr1B 96.226 53 1 1 3936 3987 645933552 645933604 1.230000e-12 86.1
61 TraesCS2D01G404300 chr5A 95.604 91 3 1 3585 3674 429750436 429750526 2.010000e-30 145.0
62 TraesCS2D01G404300 chr5A 93.684 95 6 0 3577 3671 533835198 533835104 7.220000e-30 143.0
63 TraesCS2D01G404300 chr5A 89.474 114 8 4 3561 3672 46277022 46276911 2.600000e-29 141.0
64 TraesCS2D01G404300 chr5A 91.262 103 8 1 3577 3678 442712365 442712467 9.340000e-29 139.0
65 TraesCS2D01G404300 chr5A 91.089 101 6 3 3577 3676 363847348 363847446 4.340000e-27 134.0
66 TraesCS2D01G404300 chr5A 93.651 63 3 1 3929 3990 697852921 697852859 7.370000e-15 93.5
67 TraesCS2D01G404300 chr5A 92.982 57 3 1 3915 3970 652039033 652039089 1.600000e-11 82.4
68 TraesCS2D01G404300 chr7A 91.429 105 7 2 3578 3681 561598605 561598708 7.220000e-30 143.0
69 TraesCS2D01G404300 chr7A 88.496 113 10 3 3559 3669 704610997 704610886 4.340000e-27 134.0
70 TraesCS2D01G404300 chr4B 92.857 98 7 0 3579 3676 423050990 423051087 7.220000e-30 143.0
71 TraesCS2D01G404300 chr7B 90.090 111 8 3 3563 3672 509514011 509514119 2.600000e-29 141.0
72 TraesCS2D01G404300 chr7B 88.406 69 4 3 3909 3973 648920606 648920674 5.740000e-11 80.5
73 TraesCS2D01G404300 chr6D 94.505 91 4 1 3580 3670 199210416 199210327 9.340000e-29 139.0
74 TraesCS2D01G404300 chr6D 93.548 93 4 2 3585 3676 1551883 1551792 3.360000e-28 137.0
75 TraesCS2D01G404300 chr6D 93.333 90 5 1 3585 3674 196357909 196357997 1.560000e-26 132.0
76 TraesCS2D01G404300 chr6D 96.226 53 1 1 3918 3969 35700826 35700774 1.230000e-12 86.1
77 TraesCS2D01G404300 chr6D 92.857 56 3 1 3916 3970 453813999 453814054 5.740000e-11 80.5
78 TraesCS2D01G404300 chr6D 94.231 52 2 1 3920 3970 160314781 160314832 2.060000e-10 78.7
79 TraesCS2D01G404300 chr6D 94.231 52 2 1 3920 3970 411828893 411828842 2.060000e-10 78.7
80 TraesCS2D01G404300 chr6D 95.833 48 1 1 3924 3970 249445726 249445773 7.430000e-10 76.8
81 TraesCS2D01G404300 chr6D 95.745 47 1 1 3924 3969 377870905 377870859 2.670000e-09 75.0
82 TraesCS2D01G404300 chr6D 87.692 65 2 2 3924 3987 339937612 339937553 3.450000e-08 71.3
83 TraesCS2D01G404300 chr5D 94.382 89 5 0 3582 3670 509426558 509426470 3.360000e-28 137.0
84 TraesCS2D01G404300 chr5D 92.708 96 4 3 3575 3669 481806200 481806107 1.210000e-27 135.0
85 TraesCS2D01G404300 chr5D 92.982 57 3 1 3916 3971 446131725 446131669 1.600000e-11 82.4
86 TraesCS2D01G404300 chr4A 93.478 92 6 0 3585 3676 511040570 511040479 3.360000e-28 137.0
87 TraesCS2D01G404300 chrUn 95.294 85 4 0 3585 3669 77893547 77893463 1.210000e-27 135.0
88 TraesCS2D01G404300 chrUn 94.253 87 5 0 3587 3673 187439778 187439692 4.340000e-27 134.0
89 TraesCS2D01G404300 chrUn 94.253 87 5 0 3587 3673 224368741 224368827 4.340000e-27 134.0
90 TraesCS2D01G404300 chrUn 94.253 87 5 0 3587 3673 366632862 366632776 4.340000e-27 134.0
91 TraesCS2D01G404300 chrUn 91.579 95 6 2 3576 3669 3346389 3346482 5.620000e-26 130.0
92 TraesCS2D01G404300 chrUn 95.181 83 3 1 3587 3669 320256179 320256098 5.620000e-26 130.0
93 TraesCS2D01G404300 chrUn 95.181 83 3 1 3587 3669 357700829 357700748 5.620000e-26 130.0
94 TraesCS2D01G404300 chrUn 93.103 87 6 0 3587 3673 363028805 363028891 2.020000e-25 128.0
95 TraesCS2D01G404300 chrUn 93.103 87 6 0 3587 3673 397311146 397311060 2.020000e-25 128.0
96 TraesCS2D01G404300 chrUn 91.304 92 8 0 3585 3676 37028911 37029002 7.270000e-25 126.0
97 TraesCS2D01G404300 chrUn 89.216 102 10 1 3569 3669 301349925 301350026 7.270000e-25 126.0
98 TraesCS2D01G404300 chrUn 89.216 102 10 1 3569 3669 348118310 348118209 7.270000e-25 126.0
99 TraesCS2D01G404300 chrUn 97.872 47 0 1 3924 3969 84437838 84437884 5.740000e-11 80.5
100 TraesCS2D01G404300 chrUn 97.872 47 0 1 3921 3966 122302098 122302144 5.740000e-11 80.5
101 TraesCS2D01G404300 chrUn 95.918 49 1 1 3924 3971 35713341 35713293 2.060000e-10 78.7
102 TraesCS2D01G404300 chrUn 94.231 52 2 1 3920 3970 320245694 320245643 2.060000e-10 78.7
103 TraesCS2D01G404300 chrUn 97.727 44 0 1 3924 3966 37289165 37289208 2.670000e-09 75.0
104 TraesCS2D01G404300 chrUn 97.727 44 0 1 3924 3966 37292341 37292384 2.670000e-09 75.0
105 TraesCS2D01G404300 chrUn 97.727 44 0 1 3924 3966 56557334 56557291 2.670000e-09 75.0
106 TraesCS2D01G404300 chrUn 97.727 44 0 1 3924 3966 100242008 100242051 2.670000e-09 75.0
107 TraesCS2D01G404300 chrUn 97.727 44 0 1 3924 3966 252684460 252684503 2.670000e-09 75.0
108 TraesCS2D01G404300 chrUn 97.727 44 0 1 3924 3966 279936215 279936258 2.670000e-09 75.0
109 TraesCS2D01G404300 chrUn 97.727 44 0 1 3924 3966 289138346 289138389 2.670000e-09 75.0
110 TraesCS2D01G404300 chrUn 95.745 47 1 1 3921 3966 303191977 303192023 2.670000e-09 75.0
111 TraesCS2D01G404300 chrUn 95.745 47 1 1 3924 3969 332242545 332242499 2.670000e-09 75.0
112 TraesCS2D01G404300 chr4D 93.407 91 6 0 3585 3675 11573292 11573382 1.210000e-27 135.0
113 TraesCS2D01G404300 chr4D 91.667 96 6 2 3575 3669 320593829 320593735 1.560000e-26 132.0
114 TraesCS2D01G404300 chr4D 85.714 119 13 4 3573 3689 64347455 64347339 9.400000e-24 122.0
115 TraesCS2D01G404300 chr4D 89.231 65 1 3 3924 3987 87655588 87655647 7.430000e-10 76.8
116 TraesCS2D01G404300 chr4D 89.231 65 1 2 3924 3987 89230021 89229962 7.430000e-10 76.8
117 TraesCS2D01G404300 chr4D 89.231 65 1 2 3924 3987 363958121 363958062 7.430000e-10 76.8
118 TraesCS2D01G404300 chr1A 90.816 98 9 0 3574 3671 320485578 320485675 1.560000e-26 132.0
119 TraesCS2D01G404300 chr1A 92.754 69 4 1 3920 3987 31294744 31294812 1.580000e-16 99.0
120 TraesCS2D01G404300 chr5B 90.411 73 4 2 3918 3987 344297932 344298004 7.370000e-15 93.5
121 TraesCS2D01G404300 chr6B 87.179 78 2 3 3918 3987 675231461 675231384 1.600000e-11 82.4
122 TraesCS2D01G404300 chr6B 93.478 46 3 0 1872 1917 25971380 25971335 1.240000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G404300 chr2D 518800626 518807529 6903 False 12750.000000 12750 100.000000 1 6904 1 chr2D.!!$F5 6903
1 TraesCS2D01G404300 chr2D 536487279 536488357 1078 True 1683.000000 1683 94.848000 1862 2941 1 chr2D.!!$R3 1079
2 TraesCS2D01G404300 chr2D 2671061 2672146 1085 False 1668.000000 1668 94.359000 1850 2941 1 chr2D.!!$F1 1091
3 TraesCS2D01G404300 chr2D 606757359 606758425 1066 True 1664.000000 1664 94.805000 1864 2935 1 chr2D.!!$R4 1071
4 TraesCS2D01G404300 chr2D 471448864 471449934 1070 True 1629.000000 1629 94.161000 1863 2934 1 chr2D.!!$R2 1071
5 TraesCS2D01G404300 chr2A 662961757 662966743 4986 False 1269.333333 3382 94.163833 870 6904 6 chr2A.!!$F3 6034
6 TraesCS2D01G404300 chr2A 662936355 662937129 774 False 887.000000 887 87.282000 1 798 1 chr2A.!!$F1 797
7 TraesCS2D01G404300 chr2B 611055648 611063631 7983 False 856.190000 2163 94.369400 10 6903 10 chr2B.!!$F2 6893
8 TraesCS2D01G404300 chr3D 541301193 541302262 1069 True 1700.000000 1700 95.357000 1864 2934 1 chr3D.!!$R3 1070
9 TraesCS2D01G404300 chr7D 32157449 32158537 1088 True 1666.000000 1666 94.359000 1856 2943 1 chr7D.!!$R1 1087
10 TraesCS2D01G404300 chr7D 413131131 413132187 1056 False 1613.000000 1613 94.262000 1892 2946 1 chr7D.!!$F1 1054
11 TraesCS2D01G404300 chr1D 412788122 412789195 1073 True 1637.000000 1637 94.183000 1864 2940 1 chr1D.!!$R5 1076
12 TraesCS2D01G404300 chr1D 412661753 412662825 1072 True 1626.000000 1626 94.009000 1864 2940 1 chr1D.!!$R4 1076

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
369 371 0.035152 ATCGATGTTGGCTTGCCTGA 60.035 50.000 13.18 0.00 0.00 3.86 F
574 577 0.107214 TGGCTATGTGGGTAGCAAGC 60.107 55.000 8.04 0.00 46.97 4.01 F
2154 2385 0.405585 ATCTCCCACACCCAAGTTGG 59.594 55.000 15.52 15.52 37.25 3.77 F
2903 3384 0.036294 GTGTGGGCAGACTCCCTAAC 60.036 60.000 10.28 5.99 46.67 2.34 F
3937 4457 0.822811 GGAGTTACTCCCTCCGTTCC 59.177 60.000 20.11 0.00 44.36 3.62 F
3988 4508 0.109723 TTTTGGAACGGAGGGAGTGG 59.890 55.000 0.00 0.00 0.00 4.00 F
5384 7914 1.204563 CGAGATCCGACGGACGATC 59.795 63.158 21.02 13.44 45.77 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2154 2385 0.582960 GCAAAACACATGGCAAGTGC 59.417 50.000 21.6 4.7 40.59 4.40 R
2375 2848 2.418334 GCCACCTACTAACACTAGGCAC 60.418 54.545 0.0 0.0 40.50 5.01 R
3969 4489 0.109723 CCACTCCCTCCGTTCCAAAA 59.890 55.000 0.0 0.0 0.00 2.44 R
3973 4493 0.978907 TAAACCACTCCCTCCGTTCC 59.021 55.000 0.0 0.0 0.00 3.62 R
5600 8130 0.388649 GGAACTCGATCACACGCTGT 60.389 55.000 0.0 0.0 0.00 4.40 R
5747 8277 1.028330 ATGCAATCAGTGGGTCTGCG 61.028 55.000 0.0 0.0 43.32 5.18 R
6735 9396 2.511600 GGCTCCCGGTTGATCACG 60.512 66.667 0.0 0.0 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 1.132262 CGGGGCATACATGTTTGACAC 59.868 52.381 21.66 18.02 0.00 3.67
25 27 3.004171 GGCATACATGTTTGACACGGTA 58.996 45.455 18.99 0.00 0.00 4.02
79 81 0.599204 GCGACGGTGACCTTCTTTCA 60.599 55.000 6.55 0.00 0.00 2.69
82 84 2.030540 CGACGGTGACCTTCTTTCACTA 60.031 50.000 6.55 0.00 42.63 2.74
84 86 2.288030 ACGGTGACCTTCTTTCACTACG 60.288 50.000 0.00 1.94 42.63 3.51
204 206 0.654472 GCATATTCTTTGCGCCGACG 60.654 55.000 4.18 0.00 44.07 5.12
251 253 2.780643 CGTGCTGCTCCAATGACG 59.219 61.111 0.00 0.00 0.00 4.35
252 254 2.029288 CGTGCTGCTCCAATGACGT 61.029 57.895 0.00 0.00 0.00 4.34
261 263 2.625823 CCAATGACGTGTGGTGGGC 61.626 63.158 0.00 0.00 0.00 5.36
267 269 4.293648 CGTGTGGTGGGCAGTCGA 62.294 66.667 0.00 0.00 0.00 4.20
268 270 2.110213 GTGTGGTGGGCAGTCGAA 59.890 61.111 0.00 0.00 0.00 3.71
274 276 2.911928 TGGGCAGTCGAACCACAA 59.088 55.556 0.00 0.00 0.00 3.33
276 278 1.525077 GGGCAGTCGAACCACAACA 60.525 57.895 0.00 0.00 0.00 3.33
281 283 2.223479 GCAGTCGAACCACAACATTTGT 60.223 45.455 0.00 0.00 46.75 2.83
340 342 1.301716 GCTGGTTGTCCTCTTCGCA 60.302 57.895 0.00 0.00 34.23 5.10
345 347 0.321653 GTTGTCCTCTTCGCATGGGT 60.322 55.000 9.86 0.00 0.00 4.51
369 371 0.035152 ATCGATGTTGGCTTGCCTGA 60.035 50.000 13.18 0.00 0.00 3.86
374 376 2.594303 TTGGCTTGCCTGACCGTG 60.594 61.111 13.18 0.00 0.00 4.94
391 393 0.533491 GTGGTGGTACTATGGCACGA 59.467 55.000 0.00 0.00 0.00 4.35
420 422 2.614481 GCCCTCGTGTTGTCCATCTTAA 60.614 50.000 0.00 0.00 0.00 1.85
467 469 0.736325 GACGATGGTGTGGTTCTCCG 60.736 60.000 0.00 0.00 36.30 4.63
495 497 2.676471 GCGGCAACCCTGAATGGT 60.676 61.111 0.00 0.00 41.55 3.55
518 520 1.228094 TTGTGCGATGGGCTCAACA 60.228 52.632 0.00 0.00 46.77 3.33
536 538 4.077188 GCGAGCAGCGTTGTGGAC 62.077 66.667 0.00 0.00 43.41 4.02
544 546 3.315796 CGTTGTGGACGTGGTGAC 58.684 61.111 0.00 0.00 46.49 3.67
574 577 0.107214 TGGCTATGTGGGTAGCAAGC 60.107 55.000 8.04 0.00 46.97 4.01
578 581 2.680805 GCTATGTGGGTAGCAAGCTGAA 60.681 50.000 4.53 0.00 45.03 3.02
584 587 0.746204 GGTAGCAAGCTGAAGGAGGC 60.746 60.000 4.53 0.00 0.00 4.70
585 588 1.086634 GTAGCAAGCTGAAGGAGGCG 61.087 60.000 4.53 0.00 0.00 5.52
603 607 1.407437 GCGGGAGATTCTGGTGTCATT 60.407 52.381 0.00 0.00 0.00 2.57
604 608 2.283298 CGGGAGATTCTGGTGTCATTG 58.717 52.381 0.00 0.00 0.00 2.82
614 618 1.680735 TGGTGTCATTGTGGCTTCAAC 59.319 47.619 0.00 0.00 0.00 3.18
640 644 1.675483 CGACTCTCTGGTCTGGATCTG 59.325 57.143 0.00 0.00 34.38 2.90
683 689 2.928396 CCCTCTCGTGGGTTGGGT 60.928 66.667 0.00 0.00 42.25 4.51
689 695 1.144093 TCTCGTGGGTTGGGTCAAAAT 59.856 47.619 0.00 0.00 0.00 1.82
693 699 2.869192 CGTGGGTTGGGTCAAAATTTTG 59.131 45.455 22.40 22.40 39.48 2.44
694 700 3.430929 CGTGGGTTGGGTCAAAATTTTGA 60.431 43.478 26.01 26.01 44.31 2.69
712 718 9.515226 AAATTTTGATTCTACTAGTGGCACTTA 57.485 29.630 27.24 12.14 0.00 2.24
716 722 7.043961 TGATTCTACTAGTGGCACTTATGAG 57.956 40.000 27.24 18.86 0.00 2.90
717 723 6.833933 TGATTCTACTAGTGGCACTTATGAGA 59.166 38.462 27.24 18.96 0.00 3.27
721 727 3.708631 ACTAGTGGCACTTATGAGAGCAT 59.291 43.478 27.24 0.00 40.72 3.79
738 744 2.489329 AGCATGAGTAAAAGCATTGCGT 59.511 40.909 2.38 0.00 0.00 5.24
741 747 4.475028 CATGAGTAAAAGCATTGCGTCAA 58.525 39.130 2.38 0.00 0.00 3.18
742 748 4.764679 TGAGTAAAAGCATTGCGTCAAT 57.235 36.364 2.38 0.09 34.04 2.57
753 759 4.147322 CGTCAATGGCGCCGTCAC 62.147 66.667 24.10 19.91 0.00 3.67
754 760 3.799755 GTCAATGGCGCCGTCACC 61.800 66.667 24.10 8.66 0.00 4.02
755 761 4.015406 TCAATGGCGCCGTCACCT 62.015 61.111 24.10 2.41 0.00 4.00
756 762 3.499737 CAATGGCGCCGTCACCTC 61.500 66.667 24.10 0.00 0.00 3.85
757 763 4.778143 AATGGCGCCGTCACCTCC 62.778 66.667 24.10 0.00 0.00 4.30
788 794 5.681639 GCTTCTCTATTAGGGGCTTTGTTA 58.318 41.667 0.00 0.00 0.00 2.41
789 795 6.299922 GCTTCTCTATTAGGGGCTTTGTTAT 58.700 40.000 0.00 0.00 0.00 1.89
790 796 7.450903 GCTTCTCTATTAGGGGCTTTGTTATA 58.549 38.462 0.00 0.00 0.00 0.98
797 803 4.439253 AGGGGCTTTGTTATATGTCCTC 57.561 45.455 0.00 0.00 0.00 3.71
798 804 3.138468 AGGGGCTTTGTTATATGTCCTCC 59.862 47.826 0.00 0.00 0.00 4.30
802 808 5.513267 GGGCTTTGTTATATGTCCTCCTAGG 60.513 48.000 0.82 0.82 36.46 3.02
815 821 3.055094 TCCTCCTAGGCTGTTGATTTGAC 60.055 47.826 2.96 0.00 34.61 3.18
816 822 3.307691 CCTCCTAGGCTGTTGATTTGACA 60.308 47.826 2.96 0.00 0.00 3.58
822 828 6.206634 CCTAGGCTGTTGATTTGACAACTTTA 59.793 38.462 0.00 1.31 46.79 1.85
929 936 4.218312 ACTGAGAGAAGGTGGCAAAATTT 58.782 39.130 0.00 0.00 0.00 1.82
1176 1209 1.815421 CTTCATCCACTTCGGGCCG 60.815 63.158 22.51 22.51 34.36 6.13
1509 1542 1.996898 GACACCGTCGCATACAATGAA 59.003 47.619 0.00 0.00 0.00 2.57
1587 1620 7.254227 TCCGAATTACTACAATGTTATTGCC 57.746 36.000 0.00 0.00 0.00 4.52
1591 1624 5.478233 TTACTACAATGTTATTGCCGCTG 57.522 39.130 0.00 0.00 0.00 5.18
1608 1641 3.305094 CCGCTGCATCTTTTATTTGCAAG 59.695 43.478 0.00 0.00 44.99 4.01
1630 1663 8.231161 GCAAGTTTTTAGGAGAACTACTGAATC 58.769 37.037 0.00 0.00 35.17 2.52
1730 1960 7.171508 TGCAGAAAACTGTAGTATCTGTTCTTG 59.828 37.037 19.96 4.87 40.90 3.02
1736 1966 5.073311 TGTAGTATCTGTTCTTGCAGGAC 57.927 43.478 0.00 0.00 37.12 3.85
1739 1969 6.607600 TGTAGTATCTGTTCTTGCAGGACTAT 59.392 38.462 0.00 0.00 37.50 2.12
1783 2013 3.620374 AGTGCTTATTGTTCTGCTCGATG 59.380 43.478 0.00 0.00 0.00 3.84
1817 2047 2.561037 GGCCCTTGTGGTGTTTCCG 61.561 63.158 0.00 0.00 39.52 4.30
1834 2064 1.801771 TCCGTGGTGAAAATTACTGCG 59.198 47.619 0.00 0.00 0.00 5.18
1835 2065 1.602191 CGTGGTGAAAATTACTGCGC 58.398 50.000 0.00 0.00 0.00 6.09
2126 2357 2.689035 TTTGCCATCTCGCCCACACA 62.689 55.000 0.00 0.00 0.00 3.72
2154 2385 0.405585 ATCTCCCACACCCAAGTTGG 59.594 55.000 15.52 15.52 37.25 3.77
2175 2406 1.862201 CACTTGCCATGTGTTTTGCAG 59.138 47.619 2.71 0.00 34.81 4.41
2375 2848 1.790755 TTGTAGCACTACACGGCAAG 58.209 50.000 9.98 0.00 44.81 4.01
2619 3098 2.358247 GTCCGACATGGCAACCGT 60.358 61.111 0.00 0.00 37.80 4.83
2660 3139 3.206964 TGCAGTTAAACGAACATGGACA 58.793 40.909 0.00 0.00 40.86 4.02
2669 3148 1.001974 CGAACATGGACAAGGGTCTGA 59.998 52.381 0.00 0.00 43.77 3.27
2776 3256 2.806244 GCGTTATCTATTTCGCCCACAT 59.194 45.455 0.00 0.00 42.33 3.21
2787 3267 2.740440 CCCACATGCACGCGTGTA 60.740 61.111 36.80 34.23 43.50 2.90
2793 3273 0.735978 CATGCACGCGTGTAAGAGGA 60.736 55.000 36.80 14.83 0.00 3.71
2862 3343 0.949105 CGTAGGTGTGTGGGCTGTTC 60.949 60.000 0.00 0.00 0.00 3.18
2865 3346 1.600916 GGTGTGTGGGCTGTTCCTC 60.601 63.158 0.00 0.00 34.39 3.71
2866 3347 1.451936 GTGTGTGGGCTGTTCCTCT 59.548 57.895 0.00 0.00 34.39 3.69
2868 3349 1.071699 GTGTGTGGGCTGTTCCTCTTA 59.928 52.381 0.00 0.00 34.39 2.10
2869 3350 1.985159 TGTGTGGGCTGTTCCTCTTAT 59.015 47.619 0.00 0.00 34.39 1.73
2871 3352 3.055385 TGTGTGGGCTGTTCCTCTTATAC 60.055 47.826 0.00 0.00 34.39 1.47
2872 3353 3.055385 GTGTGGGCTGTTCCTCTTATACA 60.055 47.826 0.00 0.00 34.39 2.29
2879 3360 4.562757 GCTGTTCCTCTTATACACCACACA 60.563 45.833 0.00 0.00 0.00 3.72
2881 3362 5.931294 TGTTCCTCTTATACACCACACAAA 58.069 37.500 0.00 0.00 0.00 2.83
2883 3364 7.001674 TGTTCCTCTTATACACCACACAAAAT 58.998 34.615 0.00 0.00 0.00 1.82
2896 3377 2.071778 ACAAAATGTGTGGGCAGACT 57.928 45.000 0.00 0.00 39.72 3.24
2897 3378 1.956477 ACAAAATGTGTGGGCAGACTC 59.044 47.619 0.00 0.00 39.72 3.36
2900 3381 1.136329 AATGTGTGGGCAGACTCCCT 61.136 55.000 10.28 0.00 46.67 4.20
2903 3384 0.036294 GTGTGGGCAGACTCCCTAAC 60.036 60.000 10.28 5.99 46.67 2.34
2904 3385 1.218316 GTGGGCAGACTCCCTAACG 59.782 63.158 10.28 0.00 46.67 3.18
2961 3443 9.884636 ACATTTTGTACATATGCTTCTAGTACA 57.115 29.630 14.92 0.00 42.10 2.90
2987 3469 4.439289 GCTTCATGCATTACTTTGGACTCC 60.439 45.833 0.00 0.00 42.31 3.85
3067 3560 5.221244 GGATTCTACCCATATGTTTTGTGGC 60.221 44.000 1.24 0.00 0.00 5.01
3102 3595 6.183360 GCTTAAGCTGTTTCTAAGCAGTCTAC 60.183 42.308 20.38 0.00 43.37 2.59
3396 3889 3.258123 TCCTGCTTAATTGGAAAAGGTGC 59.742 43.478 0.00 0.00 0.00 5.01
3427 3920 8.953313 ACTATTGTTAATTAGTGTAAAGCCCAC 58.047 33.333 0.00 0.00 0.00 4.61
3595 4111 9.470399 AATAAATTTAAATGTTACTCCCTCCGT 57.530 29.630 0.39 0.00 0.00 4.69
3597 4113 8.866970 AAATTTAAATGTTACTCCCTCCGTAA 57.133 30.769 0.39 0.00 0.00 3.18
3598 4114 8.866970 AATTTAAATGTTACTCCCTCCGTAAA 57.133 30.769 0.39 0.00 0.00 2.01
3599 4115 7.910441 TTTAAATGTTACTCCCTCCGTAAAG 57.090 36.000 0.00 0.00 0.00 1.85
3600 4116 5.750352 AAATGTTACTCCCTCCGTAAAGA 57.250 39.130 0.00 0.00 0.00 2.52
3601 4117 5.750352 AATGTTACTCCCTCCGTAAAGAA 57.250 39.130 0.00 0.00 0.00 2.52
3602 4118 5.750352 ATGTTACTCCCTCCGTAAAGAAA 57.250 39.130 0.00 0.00 0.00 2.52
3603 4119 5.750352 TGTTACTCCCTCCGTAAAGAAAT 57.250 39.130 0.00 0.00 0.00 2.17
3604 4120 6.855763 TGTTACTCCCTCCGTAAAGAAATA 57.144 37.500 0.00 0.00 0.00 1.40
3605 4121 7.427989 TGTTACTCCCTCCGTAAAGAAATAT 57.572 36.000 0.00 0.00 0.00 1.28
3606 4122 8.537728 TGTTACTCCCTCCGTAAAGAAATATA 57.462 34.615 0.00 0.00 0.00 0.86
3607 4123 8.980596 TGTTACTCCCTCCGTAAAGAAATATAA 58.019 33.333 0.00 0.00 0.00 0.98
3608 4124 9.473640 GTTACTCCCTCCGTAAAGAAATATAAG 57.526 37.037 0.00 0.00 0.00 1.73
3609 4125 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
3610 4126 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
3611 4127 6.756221 TCCCTCCGTAAAGAAATATAAGAGC 58.244 40.000 0.00 0.00 0.00 4.09
3612 4128 6.325545 TCCCTCCGTAAAGAAATATAAGAGCA 59.674 38.462 0.00 0.00 0.00 4.26
3613 4129 7.016268 TCCCTCCGTAAAGAAATATAAGAGCAT 59.984 37.037 0.00 0.00 0.00 3.79
3614 4130 7.661847 CCCTCCGTAAAGAAATATAAGAGCATT 59.338 37.037 0.00 0.00 0.00 3.56
3615 4131 9.057089 CCTCCGTAAAGAAATATAAGAGCATTT 57.943 33.333 0.00 0.00 0.00 2.32
3645 4161 7.836479 ACTAAAGTAGTGACCTAAACACTCT 57.164 36.000 0.00 0.00 45.58 3.24
3646 4162 8.247666 ACTAAAGTAGTGACCTAAACACTCTT 57.752 34.615 0.00 0.00 45.58 2.85
3647 4163 9.359653 ACTAAAGTAGTGACCTAAACACTCTTA 57.640 33.333 0.00 0.00 45.58 2.10
3677 4193 8.773404 TCTTTACAGAGGAAGTACATTTTAGC 57.227 34.615 0.00 0.00 0.00 3.09
3843 4362 4.248859 CAAGAGACATGTCTTTCCACGAT 58.751 43.478 28.46 5.06 40.61 3.73
3850 4369 3.026630 TGTCTTTCCACGATGAGACAC 57.973 47.619 1.25 0.00 42.42 3.67
3885 4404 8.787852 ACCAAGATCTAATGAACTGTTCTTTTC 58.212 33.333 21.76 15.17 0.00 2.29
3911 4431 2.365582 ACATGGCTTAACGTGGATTCC 58.634 47.619 0.00 0.00 0.00 3.01
3927 4447 6.235231 TGGATTCCACATTAGGAGTTACTC 57.765 41.667 3.36 3.36 39.25 2.59
3937 4457 0.822811 GGAGTTACTCCCTCCGTTCC 59.177 60.000 20.11 0.00 44.36 3.62
3938 4458 1.553706 GAGTTACTCCCTCCGTTCCA 58.446 55.000 0.00 0.00 0.00 3.53
3939 4459 1.897802 GAGTTACTCCCTCCGTTCCAA 59.102 52.381 0.00 0.00 0.00 3.53
3940 4460 2.301009 GAGTTACTCCCTCCGTTCCAAA 59.699 50.000 0.00 0.00 0.00 3.28
3941 4461 2.910977 AGTTACTCCCTCCGTTCCAAAT 59.089 45.455 0.00 0.00 0.00 2.32
3942 4462 4.098894 AGTTACTCCCTCCGTTCCAAATA 58.901 43.478 0.00 0.00 0.00 1.40
3943 4463 4.161754 AGTTACTCCCTCCGTTCCAAATAG 59.838 45.833 0.00 0.00 0.00 1.73
3944 4464 2.829023 ACTCCCTCCGTTCCAAATAGA 58.171 47.619 0.00 0.00 0.00 1.98
3945 4465 3.385115 ACTCCCTCCGTTCCAAATAGAT 58.615 45.455 0.00 0.00 0.00 1.98
3946 4466 3.134804 ACTCCCTCCGTTCCAAATAGATG 59.865 47.826 0.00 0.00 0.00 2.90
3947 4467 3.380393 TCCCTCCGTTCCAAATAGATGA 58.620 45.455 0.00 0.00 0.00 2.92
3948 4468 3.134081 TCCCTCCGTTCCAAATAGATGAC 59.866 47.826 0.00 0.00 0.00 3.06
3949 4469 3.134804 CCCTCCGTTCCAAATAGATGACT 59.865 47.826 0.00 0.00 0.00 3.41
3950 4470 4.372656 CCTCCGTTCCAAATAGATGACTC 58.627 47.826 0.00 0.00 0.00 3.36
3951 4471 4.141937 CCTCCGTTCCAAATAGATGACTCA 60.142 45.833 0.00 0.00 0.00 3.41
3952 4472 5.414789 TCCGTTCCAAATAGATGACTCAA 57.585 39.130 0.00 0.00 0.00 3.02
3953 4473 5.175859 TCCGTTCCAAATAGATGACTCAAC 58.824 41.667 0.00 0.00 0.00 3.18
3954 4474 5.046591 TCCGTTCCAAATAGATGACTCAACT 60.047 40.000 0.00 0.00 0.00 3.16
3955 4475 5.643777 CCGTTCCAAATAGATGACTCAACTT 59.356 40.000 0.00 0.00 0.00 2.66
3956 4476 6.149474 CCGTTCCAAATAGATGACTCAACTTT 59.851 38.462 0.00 0.00 0.00 2.66
3957 4477 7.017645 CGTTCCAAATAGATGACTCAACTTTG 58.982 38.462 0.00 0.00 0.00 2.77
3958 4478 7.307989 CGTTCCAAATAGATGACTCAACTTTGT 60.308 37.037 0.00 0.00 0.00 2.83
3959 4479 8.999431 GTTCCAAATAGATGACTCAACTTTGTA 58.001 33.333 0.00 0.00 0.00 2.41
3960 4480 8.547967 TCCAAATAGATGACTCAACTTTGTAC 57.452 34.615 0.00 0.00 0.00 2.90
3961 4481 8.375506 TCCAAATAGATGACTCAACTTTGTACT 58.624 33.333 0.00 0.00 0.00 2.73
3962 4482 9.653287 CCAAATAGATGACTCAACTTTGTACTA 57.347 33.333 0.00 0.00 0.00 1.82
3967 4487 8.184304 AGATGACTCAACTTTGTACTAACTCT 57.816 34.615 0.00 0.00 0.00 3.24
3968 4488 9.298250 AGATGACTCAACTTTGTACTAACTCTA 57.702 33.333 0.00 0.00 0.00 2.43
3978 4498 8.985805 ACTTTGTACTAACTCTATTTTGGAACG 58.014 33.333 0.00 0.00 0.00 3.95
3979 4499 7.894376 TTGTACTAACTCTATTTTGGAACGG 57.106 36.000 0.00 0.00 0.00 4.44
3980 4500 7.230849 TGTACTAACTCTATTTTGGAACGGA 57.769 36.000 0.00 0.00 0.00 4.69
3981 4501 7.318141 TGTACTAACTCTATTTTGGAACGGAG 58.682 38.462 0.00 0.00 0.00 4.63
3982 4502 5.731591 ACTAACTCTATTTTGGAACGGAGG 58.268 41.667 0.00 0.00 0.00 4.30
3983 4503 3.629142 ACTCTATTTTGGAACGGAGGG 57.371 47.619 0.00 0.00 0.00 4.30
3984 4504 3.178865 ACTCTATTTTGGAACGGAGGGA 58.821 45.455 0.00 0.00 0.00 4.20
3985 4505 3.197983 ACTCTATTTTGGAACGGAGGGAG 59.802 47.826 0.00 0.00 0.00 4.30
3986 4506 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
3987 4507 2.200373 ATTTTGGAACGGAGGGAGTG 57.800 50.000 0.00 0.00 0.00 3.51
3988 4508 0.109723 TTTTGGAACGGAGGGAGTGG 59.890 55.000 0.00 0.00 0.00 4.00
4205 4725 3.837355 AGCTTTTCTTGTGTGGATTCCT 58.163 40.909 3.95 0.00 0.00 3.36
4620 5265 3.304257 GGTAAGCTTCATTCATGGCATCG 60.304 47.826 0.00 0.00 0.00 3.84
4647 5292 6.818142 GCGGTTGAAAGTACTTAATTAGGGTA 59.182 38.462 8.92 0.00 0.00 3.69
4648 5293 7.334171 GCGGTTGAAAGTACTTAATTAGGGTAA 59.666 37.037 8.92 0.00 0.00 2.85
4812 5457 9.273016 GCTATAAGAATGGCTACAAACTATGAA 57.727 33.333 0.00 0.00 36.69 2.57
4911 7441 5.636121 CCTTTACTATGTGTAGCAACGACAA 59.364 40.000 0.00 0.00 32.08 3.18
5009 7539 6.430000 TGGCATTGACATCTCATCTCATAATG 59.570 38.462 0.00 0.00 0.00 1.90
5384 7914 1.204563 CGAGATCCGACGGACGATC 59.795 63.158 21.02 13.44 45.77 3.69
5408 7938 2.295349 CTCTCACAACTTTGCTGCCAAT 59.705 45.455 0.00 0.00 0.00 3.16
5416 7946 2.144833 TTTGCTGCCAATGCGACTGG 62.145 55.000 0.00 0.00 41.78 4.00
5472 8002 2.192861 CAGTTTGCGCCCTCCAACA 61.193 57.895 4.18 0.00 0.00 3.33
5747 8277 1.781429 CTATATGTCGACAGTGCACGC 59.219 52.381 24.41 4.23 0.00 5.34
5807 8337 1.339438 CCCTTCTCGGATGCATATGGG 60.339 57.143 0.00 0.66 33.16 4.00
5870 8400 4.816925 GTCATAATGTTAAGGAGAGGCCAC 59.183 45.833 5.01 0.00 40.02 5.01
5933 8463 2.801063 CAGTTTGTGAAGTGCCACTTG 58.199 47.619 16.14 0.00 38.80 3.16
5986 8517 1.970640 GGCCTTGTTTTGGGATCAACT 59.029 47.619 0.00 0.00 31.78 3.16
5993 8524 3.772025 TGTTTTGGGATCAACTTGGTGTT 59.228 39.130 0.00 0.00 39.92 3.32
6230 8824 5.353394 TCAGAAACCTTGTACACTGTTCT 57.647 39.130 9.07 6.95 0.00 3.01
6316 8942 7.126398 GTGAAGCTATTGTCAATTTCCGTATC 58.874 38.462 2.79 0.00 0.00 2.24
6422 9074 0.986527 TCCACCTCACAGATGCACAT 59.013 50.000 0.00 0.00 0.00 3.21
6735 9396 3.330853 GCCGCGGACGACATCATC 61.331 66.667 33.48 2.06 43.93 2.92
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 3.061322 GCACTACCGTGTCAAACATGTA 58.939 45.455 0.00 0.00 43.16 2.29
21 22 4.814294 GGCCTCCGTGCACTACCG 62.814 72.222 16.19 0.67 0.00 4.02
67 69 1.001633 GGGCGTAGTGAAAGAAGGTCA 59.998 52.381 0.00 0.00 0.00 4.02
204 206 1.524849 GCGATCCCTGAAGCTTCCC 60.525 63.158 23.42 0.62 0.00 3.97
233 235 2.482374 GTCATTGGAGCAGCACGC 59.518 61.111 0.00 0.00 42.91 5.34
234 236 2.029288 ACGTCATTGGAGCAGCACG 61.029 57.895 0.00 0.00 0.00 5.34
246 248 2.032528 CTGCCCACCACACGTCAT 59.967 61.111 0.00 0.00 0.00 3.06
251 253 2.110213 TTCGACTGCCCACCACAC 59.890 61.111 0.00 0.00 0.00 3.82
252 254 2.110213 GTTCGACTGCCCACCACA 59.890 61.111 0.00 0.00 0.00 4.17
261 263 3.691049 ACAAATGTTGTGGTTCGACTG 57.309 42.857 0.00 0.00 43.48 3.51
273 275 2.397597 ACCCAAGAGCCAACAAATGTT 58.602 42.857 0.00 0.00 39.12 2.71
274 276 2.086610 ACCCAAGAGCCAACAAATGT 57.913 45.000 0.00 0.00 0.00 2.71
276 278 1.693606 CCAACCCAAGAGCCAACAAAT 59.306 47.619 0.00 0.00 0.00 2.32
281 283 0.039618 GGATCCAACCCAAGAGCCAA 59.960 55.000 6.95 0.00 38.47 4.52
287 289 0.323725 CCACCTGGATCCAACCCAAG 60.324 60.000 17.00 2.41 37.39 3.61
374 376 0.526954 CGTCGTGCCATAGTACCACC 60.527 60.000 0.00 0.00 0.00 4.61
379 381 2.339418 CAAAACCGTCGTGCCATAGTA 58.661 47.619 0.00 0.00 0.00 1.82
380 382 1.153353 CAAAACCGTCGTGCCATAGT 58.847 50.000 0.00 0.00 0.00 2.12
391 393 1.452470 AACACGAGGGCAAAACCGT 60.452 52.632 0.00 0.00 40.62 4.83
420 422 3.379445 CACCGACCAGCGTACCCT 61.379 66.667 0.00 0.00 38.67 4.34
443 445 3.118454 CCACACCATCGTCGCCAC 61.118 66.667 0.00 0.00 0.00 5.01
452 454 1.131303 TTCCCGGAGAACCACACCAT 61.131 55.000 0.73 0.00 35.59 3.55
479 481 1.303236 TCACCATTCAGGGTTGCCG 60.303 57.895 0.00 0.00 43.89 5.69
487 489 0.518636 CGCACAACCTCACCATTCAG 59.481 55.000 0.00 0.00 0.00 3.02
495 497 2.359850 GCCCATCGCACAACCTCA 60.360 61.111 0.00 0.00 37.47 3.86
518 520 4.299547 TCCACAACGCTGCTCGCT 62.300 61.111 0.00 0.00 43.23 4.93
556 559 0.181350 AGCTTGCTACCCACATAGCC 59.819 55.000 2.51 0.00 45.95 3.93
561 564 0.036732 CCTTCAGCTTGCTACCCACA 59.963 55.000 0.00 0.00 0.00 4.17
569 572 3.130160 CCGCCTCCTTCAGCTTGC 61.130 66.667 0.00 0.00 0.00 4.01
574 577 0.105778 GAATCTCCCGCCTCCTTCAG 59.894 60.000 0.00 0.00 0.00 3.02
578 581 1.764054 CCAGAATCTCCCGCCTCCT 60.764 63.158 0.00 0.00 0.00 3.69
584 587 2.283298 CAATGACACCAGAATCTCCCG 58.717 52.381 0.00 0.00 0.00 5.14
585 588 3.012518 CACAATGACACCAGAATCTCCC 58.987 50.000 0.00 0.00 0.00 4.30
603 607 1.885388 CGTCACCGTTGAAGCCACA 60.885 57.895 0.00 0.00 31.90 4.17
604 608 1.593209 TCGTCACCGTTGAAGCCAC 60.593 57.895 0.00 0.00 31.90 5.01
614 618 0.956410 AGACCAGAGAGTCGTCACCG 60.956 60.000 0.00 0.00 41.83 4.94
626 630 1.198713 GCCTTCAGATCCAGACCAGA 58.801 55.000 0.00 0.00 0.00 3.86
689 695 8.318412 TCATAAGTGCCACTAGTAGAATCAAAA 58.682 33.333 3.59 0.00 0.00 2.44
693 699 7.278461 TCTCATAAGTGCCACTAGTAGAATC 57.722 40.000 3.59 0.00 0.00 2.52
694 700 6.239176 GCTCTCATAAGTGCCACTAGTAGAAT 60.239 42.308 3.59 0.00 36.28 2.40
696 702 4.580995 GCTCTCATAAGTGCCACTAGTAGA 59.419 45.833 3.59 0.00 36.28 2.59
697 703 4.339530 TGCTCTCATAAGTGCCACTAGTAG 59.660 45.833 0.00 0.00 40.51 2.57
698 704 4.278310 TGCTCTCATAAGTGCCACTAGTA 58.722 43.478 0.00 0.00 40.51 1.82
699 705 3.099905 TGCTCTCATAAGTGCCACTAGT 58.900 45.455 0.00 0.00 40.51 2.57
700 706 3.808466 TGCTCTCATAAGTGCCACTAG 57.192 47.619 0.00 0.00 40.51 2.57
701 707 3.706086 TCATGCTCTCATAAGTGCCACTA 59.294 43.478 0.00 0.00 40.51 2.74
703 709 2.871022 CTCATGCTCTCATAAGTGCCAC 59.129 50.000 0.00 0.00 40.51 5.01
704 710 2.502947 ACTCATGCTCTCATAAGTGCCA 59.497 45.455 0.00 0.00 40.51 4.92
705 711 3.191078 ACTCATGCTCTCATAAGTGCC 57.809 47.619 0.00 0.00 40.51 5.01
706 712 6.668541 TTTTACTCATGCTCTCATAAGTGC 57.331 37.500 0.00 0.00 41.38 4.40
712 718 5.450137 GCAATGCTTTTACTCATGCTCTCAT 60.450 40.000 0.00 0.00 0.00 2.90
716 722 3.103738 CGCAATGCTTTTACTCATGCTC 58.896 45.455 2.94 0.00 0.00 4.26
717 723 2.489329 ACGCAATGCTTTTACTCATGCT 59.511 40.909 2.94 0.00 0.00 3.79
721 727 4.475028 CATTGACGCAATGCTTTTACTCA 58.525 39.130 16.00 0.00 43.38 3.41
725 731 2.605030 GCCATTGACGCAATGCTTTTA 58.395 42.857 20.30 0.00 46.73 1.52
747 753 2.567049 GACACTCGGAGGTGACGG 59.433 66.667 10.23 0.00 40.13 4.79
748 754 2.176055 CGACACTCGGAGGTGACG 59.824 66.667 10.23 12.48 44.81 4.35
749 755 2.126424 GCGACACTCGGAGGTGAC 60.126 66.667 10.23 5.24 40.84 3.67
750 756 1.863662 GAAGCGACACTCGGAGGTGA 61.864 60.000 10.23 0.00 40.84 4.02
751 757 1.444553 GAAGCGACACTCGGAGGTG 60.445 63.158 10.23 7.84 40.84 4.00
752 758 1.587933 GAGAAGCGACACTCGGAGGT 61.588 60.000 10.23 4.45 40.84 3.85
753 759 1.137825 GAGAAGCGACACTCGGAGG 59.862 63.158 10.23 1.07 40.84 4.30
754 760 1.370609 TAGAGAAGCGACACTCGGAG 58.629 55.000 2.83 2.83 40.84 4.63
755 761 2.039818 ATAGAGAAGCGACACTCGGA 57.960 50.000 0.00 0.00 40.84 4.55
756 762 2.853731 AATAGAGAAGCGACACTCGG 57.146 50.000 0.00 0.00 40.84 4.63
757 763 3.304123 CCCTAATAGAGAAGCGACACTCG 60.304 52.174 0.00 0.00 43.89 4.18
758 764 3.004944 CCCCTAATAGAGAAGCGACACTC 59.995 52.174 0.00 0.00 0.00 3.51
759 765 2.959707 CCCCTAATAGAGAAGCGACACT 59.040 50.000 0.00 0.00 0.00 3.55
760 766 2.546162 GCCCCTAATAGAGAAGCGACAC 60.546 54.545 0.00 0.00 0.00 3.67
761 767 1.687123 GCCCCTAATAGAGAAGCGACA 59.313 52.381 0.00 0.00 0.00 4.35
788 794 3.928754 TCAACAGCCTAGGAGGACATAT 58.071 45.455 14.75 0.00 37.67 1.78
789 795 3.398318 TCAACAGCCTAGGAGGACATA 57.602 47.619 14.75 0.00 37.67 2.29
790 796 2.254152 TCAACAGCCTAGGAGGACAT 57.746 50.000 14.75 0.00 37.67 3.06
797 803 4.074970 AGTTGTCAAATCAACAGCCTAGG 58.925 43.478 3.67 3.67 46.78 3.02
798 804 5.695851 AAGTTGTCAAATCAACAGCCTAG 57.304 39.130 11.22 0.00 46.78 3.02
802 808 9.677567 TTCTAATAAAGTTGTCAAATCAACAGC 57.322 29.630 11.22 0.00 46.78 4.40
905 912 0.318441 TTGCCACCTTCTCTCAGTCG 59.682 55.000 0.00 0.00 0.00 4.18
929 936 5.500234 AGCCTATCAAGTGAACTTTATGCA 58.500 37.500 0.00 0.00 33.11 3.96
1176 1209 0.666577 CGGAGTCCGTGAAGGTGTTC 60.667 60.000 23.83 0.00 42.73 3.18
1509 1542 2.446435 GTCATTTGGCCCATGTAGTGT 58.554 47.619 0.00 0.00 0.00 3.55
1591 1624 8.987890 TCCTAAAAACTTGCAAATAAAAGATGC 58.012 29.630 0.00 0.00 40.45 3.91
1630 1663 3.849911 TCTTCAACGACCTGCATTCTAG 58.150 45.455 0.00 0.00 0.00 2.43
1682 1904 3.078891 AGGTCAAGAAGGAAGGCATTC 57.921 47.619 1.60 1.60 35.15 2.67
1685 1907 2.586425 CAAAGGTCAAGAAGGAAGGCA 58.414 47.619 0.00 0.00 0.00 4.75
1687 1909 2.555757 CTGCAAAGGTCAAGAAGGAAGG 59.444 50.000 0.00 0.00 0.00 3.46
1730 1960 2.103771 TGATCCAAGAGCATAGTCCTGC 59.896 50.000 0.00 0.00 42.62 4.85
1736 1966 4.832266 AGTACTCCTGATCCAAGAGCATAG 59.168 45.833 0.00 0.00 0.00 2.23
1739 1969 3.027412 GAGTACTCCTGATCCAAGAGCA 58.973 50.000 12.13 0.00 0.00 4.26
1783 2013 2.368548 AGGGCCAAACTTCATGTTTTCC 59.631 45.455 6.18 0.00 45.69 3.13
1817 2047 2.989422 AGCGCAGTAATTTTCACCAC 57.011 45.000 11.47 0.00 0.00 4.16
2126 2357 1.078528 TGTGGGAGATGAGACGGGT 59.921 57.895 0.00 0.00 0.00 5.28
2154 2385 0.582960 GCAAAACACATGGCAAGTGC 59.417 50.000 21.60 4.70 40.59 4.40
2375 2848 2.418334 GCCACCTACTAACACTAGGCAC 60.418 54.545 0.00 0.00 40.50 5.01
2548 3027 6.583806 CAGTTGCCATCTAATGTCAAAAGTTC 59.416 38.462 0.00 0.00 0.00 3.01
2619 3098 1.001974 AGTTGCCATGTCGCTGAACTA 59.998 47.619 0.00 0.00 0.00 2.24
2660 3139 0.482446 TTGCCATGGTTCAGACCCTT 59.518 50.000 14.67 0.00 45.92 3.95
2669 3148 2.990967 CCCGCAGTTGCCATGGTT 60.991 61.111 14.67 0.00 37.91 3.67
2776 3256 0.942410 GTTCCTCTTACACGCGTGCA 60.942 55.000 37.35 24.66 0.00 4.57
2787 3267 0.475048 TTTCCCTCCCGGTTCCTCTT 60.475 55.000 0.00 0.00 0.00 2.85
2862 3343 6.817765 ACATTTTGTGTGGTGTATAAGAGG 57.182 37.500 0.00 0.00 40.28 3.69
2879 3360 1.620822 GGAGTCTGCCCACACATTTT 58.379 50.000 0.00 0.00 0.00 1.82
2890 3371 2.187163 GGGCGTTAGGGAGTCTGC 59.813 66.667 0.00 0.00 0.00 4.26
2891 3372 1.218316 GTGGGCGTTAGGGAGTCTG 59.782 63.158 0.00 0.00 0.00 3.51
2892 3373 1.229082 TGTGGGCGTTAGGGAGTCT 60.229 57.895 0.00 0.00 0.00 3.24
2893 3374 1.079336 GTGTGGGCGTTAGGGAGTC 60.079 63.158 0.00 0.00 0.00 3.36
2896 3377 2.918802 ACGTGTGGGCGTTAGGGA 60.919 61.111 0.00 0.00 43.04 4.20
2897 3378 2.740826 CACGTGTGGGCGTTAGGG 60.741 66.667 7.58 0.00 43.83 3.53
2920 3402 6.737254 ACAAAATGTTAGGACACCGATAAG 57.263 37.500 0.00 0.00 38.91 1.73
3067 3560 0.798776 CAGCTTAAGCACCAAGTCCG 59.201 55.000 28.39 2.45 45.16 4.79
3102 3595 9.401058 ACCTGAACATATAAAAGGAAGAATCTG 57.599 33.333 0.00 0.00 0.00 2.90
3241 3734 2.169978 TGGTCCAGCATCTGAGAAGATG 59.830 50.000 10.67 10.67 46.13 2.90
3577 4093 6.855763 TCTTTACGGAGGGAGTAACATTTA 57.144 37.500 0.00 0.00 34.25 1.40
3587 4103 6.325545 TGCTCTTATATTTCTTTACGGAGGGA 59.674 38.462 0.00 0.00 0.00 4.20
3588 4104 6.522054 TGCTCTTATATTTCTTTACGGAGGG 58.478 40.000 0.00 0.00 0.00 4.30
3589 4105 8.608844 AATGCTCTTATATTTCTTTACGGAGG 57.391 34.615 0.00 0.00 0.00 4.30
3621 4137 7.836479 AGAGTGTTTAGGTCACTACTTTAGT 57.164 36.000 0.00 0.00 44.68 2.24
3651 4167 9.216117 GCTAAAATGTACTTCCTCTGTAAAGAA 57.784 33.333 0.00 0.00 0.00 2.52
3652 4168 8.372459 TGCTAAAATGTACTTCCTCTGTAAAGA 58.628 33.333 0.00 0.00 0.00 2.52
3653 4169 8.547967 TGCTAAAATGTACTTCCTCTGTAAAG 57.452 34.615 0.00 0.00 0.00 1.85
3657 4173 9.988815 CTATATGCTAAAATGTACTTCCTCTGT 57.011 33.333 0.00 0.00 0.00 3.41
3658 4174 9.988815 ACTATATGCTAAAATGTACTTCCTCTG 57.011 33.333 0.00 0.00 0.00 3.35
3692 4208 3.625764 GCGACCATTGAGCCTTAATTGTA 59.374 43.478 0.00 0.00 0.00 2.41
3843 4362 6.497259 AGATCTTGGTAGTAAAAGGTGTCTCA 59.503 38.462 0.00 0.00 0.00 3.27
3850 4369 9.892130 AGTTCATTAGATCTTGGTAGTAAAAGG 57.108 33.333 0.00 0.00 0.00 3.11
3885 4404 2.006888 CACGTTAAGCCATGTACCCTG 58.993 52.381 0.00 0.00 0.00 4.45
3925 4445 3.388024 TCATCTATTTGGAACGGAGGGAG 59.612 47.826 0.00 0.00 0.00 4.30
3927 4447 3.134804 AGTCATCTATTTGGAACGGAGGG 59.865 47.826 0.00 0.00 0.00 4.30
3928 4448 4.141937 TGAGTCATCTATTTGGAACGGAGG 60.142 45.833 0.00 0.00 0.00 4.30
3929 4449 5.011090 TGAGTCATCTATTTGGAACGGAG 57.989 43.478 0.00 0.00 0.00 4.63
3930 4450 5.046591 AGTTGAGTCATCTATTTGGAACGGA 60.047 40.000 1.70 0.00 0.00 4.69
3931 4451 5.178797 AGTTGAGTCATCTATTTGGAACGG 58.821 41.667 1.70 0.00 0.00 4.44
3932 4452 6.727824 AAGTTGAGTCATCTATTTGGAACG 57.272 37.500 4.14 0.00 0.00 3.95
3933 4453 7.875971 ACAAAGTTGAGTCATCTATTTGGAAC 58.124 34.615 15.32 0.13 32.17 3.62
3934 4454 8.999431 GTACAAAGTTGAGTCATCTATTTGGAA 58.001 33.333 15.32 5.41 32.17 3.53
3935 4455 8.375506 AGTACAAAGTTGAGTCATCTATTTGGA 58.624 33.333 15.32 7.93 32.17 3.53
3936 4456 8.553459 AGTACAAAGTTGAGTCATCTATTTGG 57.447 34.615 15.32 0.00 32.17 3.28
3941 4461 9.298250 AGAGTTAGTACAAAGTTGAGTCATCTA 57.702 33.333 4.14 0.00 0.00 1.98
3942 4462 8.184304 AGAGTTAGTACAAAGTTGAGTCATCT 57.816 34.615 0.00 0.00 0.00 2.90
3952 4472 8.985805 CGTTCCAAAATAGAGTTAGTACAAAGT 58.014 33.333 0.00 0.00 0.00 2.66
3953 4473 8.440833 CCGTTCCAAAATAGAGTTAGTACAAAG 58.559 37.037 0.00 0.00 0.00 2.77
3954 4474 8.149647 TCCGTTCCAAAATAGAGTTAGTACAAA 58.850 33.333 0.00 0.00 0.00 2.83
3955 4475 7.669427 TCCGTTCCAAAATAGAGTTAGTACAA 58.331 34.615 0.00 0.00 0.00 2.41
3956 4476 7.230849 TCCGTTCCAAAATAGAGTTAGTACA 57.769 36.000 0.00 0.00 0.00 2.90
3957 4477 6.755607 CCTCCGTTCCAAAATAGAGTTAGTAC 59.244 42.308 0.00 0.00 0.00 2.73
3958 4478 6.127253 CCCTCCGTTCCAAAATAGAGTTAGTA 60.127 42.308 0.00 0.00 0.00 1.82
3959 4479 5.338137 CCCTCCGTTCCAAAATAGAGTTAGT 60.338 44.000 0.00 0.00 0.00 2.24
3960 4480 5.105064 TCCCTCCGTTCCAAAATAGAGTTAG 60.105 44.000 0.00 0.00 0.00 2.34
3961 4481 4.778958 TCCCTCCGTTCCAAAATAGAGTTA 59.221 41.667 0.00 0.00 0.00 2.24
3962 4482 3.585732 TCCCTCCGTTCCAAAATAGAGTT 59.414 43.478 0.00 0.00 0.00 3.01
3963 4483 3.178865 TCCCTCCGTTCCAAAATAGAGT 58.821 45.455 0.00 0.00 0.00 3.24
3964 4484 3.197983 ACTCCCTCCGTTCCAAAATAGAG 59.802 47.826 0.00 0.00 0.00 2.43
3965 4485 3.055385 CACTCCCTCCGTTCCAAAATAGA 60.055 47.826 0.00 0.00 0.00 1.98
3966 4486 3.270877 CACTCCCTCCGTTCCAAAATAG 58.729 50.000 0.00 0.00 0.00 1.73
3967 4487 2.026636 CCACTCCCTCCGTTCCAAAATA 60.027 50.000 0.00 0.00 0.00 1.40
3968 4488 1.271926 CCACTCCCTCCGTTCCAAAAT 60.272 52.381 0.00 0.00 0.00 1.82
3969 4489 0.109723 CCACTCCCTCCGTTCCAAAA 59.890 55.000 0.00 0.00 0.00 2.44
3970 4490 1.057851 ACCACTCCCTCCGTTCCAAA 61.058 55.000 0.00 0.00 0.00 3.28
3971 4491 1.057851 AACCACTCCCTCCGTTCCAA 61.058 55.000 0.00 0.00 0.00 3.53
3972 4492 1.057851 AAACCACTCCCTCCGTTCCA 61.058 55.000 0.00 0.00 0.00 3.53
3973 4493 0.978907 TAAACCACTCCCTCCGTTCC 59.021 55.000 0.00 0.00 0.00 3.62
3974 4494 1.897802 TCTAAACCACTCCCTCCGTTC 59.102 52.381 0.00 0.00 0.00 3.95
3975 4495 2.019807 TCTAAACCACTCCCTCCGTT 57.980 50.000 0.00 0.00 0.00 4.44
3976 4496 2.019807 TTCTAAACCACTCCCTCCGT 57.980 50.000 0.00 0.00 0.00 4.69
3977 4497 4.748277 TTATTCTAAACCACTCCCTCCG 57.252 45.455 0.00 0.00 0.00 4.63
3978 4498 6.309389 TCTTTATTCTAAACCACTCCCTCC 57.691 41.667 0.00 0.00 0.00 4.30
3979 4499 6.824196 CCTTCTTTATTCTAAACCACTCCCTC 59.176 42.308 0.00 0.00 0.00 4.30
3980 4500 6.504279 TCCTTCTTTATTCTAAACCACTCCCT 59.496 38.462 0.00 0.00 0.00 4.20
3981 4501 6.718294 TCCTTCTTTATTCTAAACCACTCCC 58.282 40.000 0.00 0.00 0.00 4.30
3982 4502 8.809468 AATCCTTCTTTATTCTAAACCACTCC 57.191 34.615 0.00 0.00 0.00 3.85
4056 4576 5.343307 AATGCAGGGTATGATTTTTGACC 57.657 39.130 0.00 0.00 0.00 4.02
4205 4725 2.360844 TCGGCAGTTTGTCAAGAAACA 58.639 42.857 5.68 0.00 38.14 2.83
4346 4868 6.563422 TCCAAATCAATAATTGCACTACAGC 58.437 36.000 0.00 0.00 0.00 4.40
4620 5265 5.065602 CCTAATTAAGTACTTTCAACCGCCC 59.934 44.000 14.49 0.00 0.00 6.13
4829 5474 7.508977 ACAAGGGATTTTAACTTTGGAATCTGA 59.491 33.333 0.00 0.00 0.00 3.27
4830 5475 7.670364 ACAAGGGATTTTAACTTTGGAATCTG 58.330 34.615 0.00 0.00 0.00 2.90
4831 5476 7.855784 ACAAGGGATTTTAACTTTGGAATCT 57.144 32.000 0.00 0.00 0.00 2.40
4911 7441 5.423704 TTCATGCCAATCATTTTCATGGT 57.576 34.783 8.15 0.00 36.22 3.55
5009 7539 1.873591 CAGAACACTGCAGGTTGTACC 59.126 52.381 19.93 9.64 38.99 3.34
5381 7911 4.378253 GCAGCAAAGTTGTGAGAGAAGATC 60.378 45.833 0.00 0.00 0.00 2.75
5384 7914 2.031333 GGCAGCAAAGTTGTGAGAGAAG 60.031 50.000 0.00 0.00 0.00 2.85
5462 7992 4.410400 CGGAGGGTGTTGGAGGGC 62.410 72.222 0.00 0.00 0.00 5.19
5472 8002 4.528920 GAGTATATGCTATCTCGGAGGGT 58.471 47.826 4.96 0.00 0.00 4.34
5600 8130 0.388649 GGAACTCGATCACACGCTGT 60.389 55.000 0.00 0.00 0.00 4.40
5711 8241 1.745320 ATAGCTTCAGGTACCGGGCG 61.745 60.000 12.41 4.83 0.00 6.13
5747 8277 1.028330 ATGCAATCAGTGGGTCTGCG 61.028 55.000 0.00 0.00 43.32 5.18
5807 8337 3.471680 GGATGGCTTCTCATGGTCTAAC 58.528 50.000 0.00 0.00 0.00 2.34
5933 8463 4.761739 TGAAACATGACACTGGGAAATCTC 59.238 41.667 0.00 0.00 0.00 2.75
5986 8517 6.193514 TCGTAAGATATACACGAACACCAA 57.806 37.500 0.00 0.00 45.01 3.67
6107 8638 7.704899 GGTTGCAGAAACTAAATTTGTTACTGT 59.295 33.333 0.00 0.00 38.92 3.55
6108 8639 7.704472 TGGTTGCAGAAACTAAATTTGTTACTG 59.296 33.333 0.00 5.59 38.92 2.74
6109 8640 7.777095 TGGTTGCAGAAACTAAATTTGTTACT 58.223 30.769 0.00 0.00 38.92 2.24
6110 8641 7.995463 TGGTTGCAGAAACTAAATTTGTTAC 57.005 32.000 0.00 0.00 38.92 2.50
6111 8642 7.223777 GCTTGGTTGCAGAAACTAAATTTGTTA 59.776 33.333 0.00 0.00 38.60 2.41
6256 8850 5.101648 TCCTCATCACATTATTCAGTGCA 57.898 39.130 0.00 0.00 35.76 4.57
6257 8851 5.587844 AGTTCCTCATCACATTATTCAGTGC 59.412 40.000 0.00 0.00 35.76 4.40
6259 8853 7.046652 CAGAGTTCCTCATCACATTATTCAGT 58.953 38.462 0.00 0.00 32.06 3.41
6297 8891 6.422223 GCAGTGATACGGAAATTGACAATAG 58.578 40.000 0.00 0.00 0.00 1.73
6298 8892 5.006261 CGCAGTGATACGGAAATTGACAATA 59.994 40.000 0.00 0.00 0.00 1.90
6625 9286 3.983420 CTTGCTGGGGCTGGGGAA 61.983 66.667 0.00 0.00 39.59 3.97
6735 9396 2.511600 GGCTCCCGGTTGATCACG 60.512 66.667 0.00 0.00 0.00 4.35
6792 9453 3.833645 TCGGTGAGGGAATCCGCG 61.834 66.667 0.00 0.00 43.35 6.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.