Multiple sequence alignment - TraesCS2D01G402800

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G402800 chr2D 100.000 2498 0 0 1 2498 517784664 517787161 0.000000e+00 4614
1 TraesCS2D01G402800 chr2D 97.052 441 13 0 2058 2498 517873367 517873807 0.000000e+00 743
2 TraesCS2D01G402800 chr5D 97.574 2061 47 3 1 2060 532752357 532750299 0.000000e+00 3526
3 TraesCS2D01G402800 chr4D 96.291 2076 44 9 1 2058 175105326 175107386 0.000000e+00 3376
4 TraesCS2D01G402800 chr4D 91.933 595 19 6 1473 2059 173129356 173129929 0.000000e+00 806
5 TraesCS2D01G402800 chr1A 96.337 2020 44 9 1 1991 116703371 116705389 0.000000e+00 3293
6 TraesCS2D01G402800 chr1A 97.123 1599 42 2 1 1599 394599116 394600710 0.000000e+00 2695
7 TraesCS2D01G402800 chr1A 95.789 190 8 0 1869 2058 515193205 515193394 8.680000e-80 307
8 TraesCS2D01G402800 chr5B 95.419 2052 66 6 1 2051 532362746 532364770 0.000000e+00 3243
9 TraesCS2D01G402800 chr5B 93.750 1184 49 5 875 2057 681180915 681179756 0.000000e+00 1753
10 TraesCS2D01G402800 chr5B 95.833 192 8 0 1867 2058 436155919 436156110 6.710000e-81 311
11 TraesCS2D01G402800 chr3B 93.867 2087 73 15 1 2059 636263346 636265405 0.000000e+00 3094
12 TraesCS2D01G402800 chr3B 97.248 1599 40 2 1 1599 565442174 565440580 0.000000e+00 2706
13 TraesCS2D01G402800 chr3B 97.123 1599 42 3 1 1599 217968232 217969826 0.000000e+00 2695
14 TraesCS2D01G402800 chr3B 93.878 441 23 2 2058 2498 611774270 611774706 0.000000e+00 662
15 TraesCS2D01G402800 chr1B 97.186 1599 41 2 1 1599 70692697 70691103 0.000000e+00 2700
16 TraesCS2D01G402800 chr7A 97.123 1599 42 2 1 1599 594456847 594458441 0.000000e+00 2695
17 TraesCS2D01G402800 chr6A 96.998 1599 44 2 1 1599 68986030 68987624 0.000000e+00 2684
18 TraesCS2D01G402800 chr7B 95.219 1234 43 9 830 2059 8966401 8967622 0.000000e+00 1938
19 TraesCS2D01G402800 chr5A 92.614 704 14 3 1355 2057 695337332 695336666 0.000000e+00 977
20 TraesCS2D01G402800 chr5A 92.362 707 16 7 1355 2060 329384374 329383705 0.000000e+00 972
21 TraesCS2D01G402800 chr3D 94.331 441 25 0 2058 2498 287166567 287166127 0.000000e+00 676
22 TraesCS2D01G402800 chr3D 93.878 441 26 1 2058 2498 482625164 482624725 0.000000e+00 664
23 TraesCS2D01G402800 chr3A 93.919 444 23 4 2058 2498 492857445 492857887 0.000000e+00 667
24 TraesCS2D01G402800 chr3A 95.855 193 8 0 1867 2059 112960517 112960325 1.870000e-81 313
25 TraesCS2D01G402800 chr4B 93.651 441 28 0 2058 2498 616293806 616293366 0.000000e+00 660
26 TraesCS2D01G402800 chrUn 93.651 441 24 2 2058 2498 282896301 282896737 0.000000e+00 656
27 TraesCS2D01G402800 chrUn 93.651 441 24 2 2058 2498 288341071 288340635 0.000000e+00 656
28 TraesCS2D01G402800 chr6B 93.665 442 23 3 2058 2498 464941358 464941795 0.000000e+00 656
29 TraesCS2D01G402800 chr6B 95.789 190 8 0 1869 2058 396950063 396950252 8.680000e-80 307
30 TraesCS2D01G402800 chr2B 95.812 191 8 0 1869 2059 465134545 465134355 2.410000e-80 309


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G402800 chr2D 517784664 517787161 2497 False 4614 4614 100.000 1 2498 1 chr2D.!!$F1 2497
1 TraesCS2D01G402800 chr5D 532750299 532752357 2058 True 3526 3526 97.574 1 2060 1 chr5D.!!$R1 2059
2 TraesCS2D01G402800 chr4D 175105326 175107386 2060 False 3376 3376 96.291 1 2058 1 chr4D.!!$F2 2057
3 TraesCS2D01G402800 chr4D 173129356 173129929 573 False 806 806 91.933 1473 2059 1 chr4D.!!$F1 586
4 TraesCS2D01G402800 chr1A 116703371 116705389 2018 False 3293 3293 96.337 1 1991 1 chr1A.!!$F1 1990
5 TraesCS2D01G402800 chr1A 394599116 394600710 1594 False 2695 2695 97.123 1 1599 1 chr1A.!!$F2 1598
6 TraesCS2D01G402800 chr5B 532362746 532364770 2024 False 3243 3243 95.419 1 2051 1 chr5B.!!$F2 2050
7 TraesCS2D01G402800 chr5B 681179756 681180915 1159 True 1753 1753 93.750 875 2057 1 chr5B.!!$R1 1182
8 TraesCS2D01G402800 chr3B 636263346 636265405 2059 False 3094 3094 93.867 1 2059 1 chr3B.!!$F3 2058
9 TraesCS2D01G402800 chr3B 565440580 565442174 1594 True 2706 2706 97.248 1 1599 1 chr3B.!!$R1 1598
10 TraesCS2D01G402800 chr3B 217968232 217969826 1594 False 2695 2695 97.123 1 1599 1 chr3B.!!$F1 1598
11 TraesCS2D01G402800 chr1B 70691103 70692697 1594 True 2700 2700 97.186 1 1599 1 chr1B.!!$R1 1598
12 TraesCS2D01G402800 chr7A 594456847 594458441 1594 False 2695 2695 97.123 1 1599 1 chr7A.!!$F1 1598
13 TraesCS2D01G402800 chr6A 68986030 68987624 1594 False 2684 2684 96.998 1 1599 1 chr6A.!!$F1 1598
14 TraesCS2D01G402800 chr7B 8966401 8967622 1221 False 1938 1938 95.219 830 2059 1 chr7B.!!$F1 1229
15 TraesCS2D01G402800 chr5A 695336666 695337332 666 True 977 977 92.614 1355 2057 1 chr5A.!!$R2 702
16 TraesCS2D01G402800 chr5A 329383705 329384374 669 True 972 972 92.362 1355 2060 1 chr5A.!!$R1 705

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
311 312 1.403679 CCCTCGACAAAACAAGCAACA 59.596 47.619 0.0 0.0 0.0 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2139 2253 0.02877 TTCGCTTCAGGCAACAAACG 59.971 50.0 0.0 0.0 41.91 3.6 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 3.714798 TCCTCACACTTAGGAGTTTGGTT 59.285 43.478 0.00 0.00 38.24 3.67
187 188 2.999355 GACTGCCTTAGAGCTTCAACTG 59.001 50.000 0.00 0.00 0.00 3.16
201 202 5.011125 AGCTTCAACTGCACTTCTTAGAGTA 59.989 40.000 0.00 0.00 0.00 2.59
239 240 1.783031 GATGAGAAGCCTGCCATGCG 61.783 60.000 0.00 0.00 0.00 4.73
296 297 3.643792 AGGATCAATCTAGGTTTCCCTCG 59.356 47.826 3.24 0.00 41.45 4.63
311 312 1.403679 CCCTCGACAAAACAAGCAACA 59.596 47.619 0.00 0.00 0.00 3.33
955 959 5.454966 AGAAAAGGAACAGGTTACAATGGT 58.545 37.500 0.00 0.00 0.00 3.55
1022 1026 1.202359 GCAACGGTTTCAAAAGAGGCA 60.202 47.619 0.00 0.00 0.00 4.75
1110 1114 2.158900 GGTGGACCCATCACTATCACAG 60.159 54.545 0.00 0.00 35.61 3.66
1191 1195 1.331756 GTGGCTATTGGTGCATCTTCG 59.668 52.381 0.00 0.00 0.00 3.79
1229 1233 5.704515 GCAATCTGCATAGGACATCAACTAT 59.295 40.000 0.00 0.00 44.26 2.12
1509 1525 6.973843 TGATGACTTTTGATTGAGACTTTGG 58.026 36.000 0.00 0.00 0.00 3.28
1600 1640 7.681939 TTATTCTGTTTGTCTTATGTGGACC 57.318 36.000 0.00 0.00 33.22 4.46
1601 1641 4.974645 TCTGTTTGTCTTATGTGGACCT 57.025 40.909 0.00 0.00 33.22 3.85
1602 1642 5.304686 TCTGTTTGTCTTATGTGGACCTT 57.695 39.130 0.00 0.00 33.22 3.50
1603 1643 5.690865 TCTGTTTGTCTTATGTGGACCTTT 58.309 37.500 0.00 0.00 33.22 3.11
1604 1644 5.763204 TCTGTTTGTCTTATGTGGACCTTTC 59.237 40.000 0.00 0.00 33.22 2.62
1605 1645 5.441500 TGTTTGTCTTATGTGGACCTTTCA 58.558 37.500 0.00 0.00 33.22 2.69
1927 2022 4.537936 GCTGTATGCCTAGTTGCTTAAC 57.462 45.455 0.00 0.00 35.15 2.01
1997 2108 0.394565 CCTCGCCTTATGCCTTAGCT 59.605 55.000 0.00 0.00 40.80 3.32
1998 2109 1.618837 CCTCGCCTTATGCCTTAGCTA 59.381 52.381 0.00 0.00 40.80 3.32
2060 2174 6.316890 CCTTAGCGCCTTAAAAACATAGGTAA 59.683 38.462 2.29 0.00 0.00 2.85
2061 2175 5.556355 AGCGCCTTAAAAACATAGGTAAC 57.444 39.130 2.29 0.00 0.00 2.50
2080 2194 7.292129 GGTAACTCTCGAATTGAAACCTTAG 57.708 40.000 0.00 0.00 0.00 2.18
2081 2195 7.095270 GGTAACTCTCGAATTGAAACCTTAGA 58.905 38.462 0.00 0.00 0.00 2.10
2082 2196 7.601508 GGTAACTCTCGAATTGAAACCTTAGAA 59.398 37.037 0.00 0.00 0.00 2.10
2083 2197 8.985805 GTAACTCTCGAATTGAAACCTTAGAAA 58.014 33.333 0.00 0.00 0.00 2.52
2084 2198 8.446599 AACTCTCGAATTGAAACCTTAGAAAA 57.553 30.769 0.00 0.00 0.00 2.29
2085 2199 8.622948 ACTCTCGAATTGAAACCTTAGAAAAT 57.377 30.769 0.00 0.00 0.00 1.82
2086 2200 9.720769 ACTCTCGAATTGAAACCTTAGAAAATA 57.279 29.630 0.00 0.00 0.00 1.40
2089 2203 9.638300 CTCGAATTGAAACCTTAGAAAATATCG 57.362 33.333 0.00 0.00 0.00 2.92
2090 2204 9.373603 TCGAATTGAAACCTTAGAAAATATCGA 57.626 29.630 0.00 0.00 0.00 3.59
2091 2205 9.638300 CGAATTGAAACCTTAGAAAATATCGAG 57.362 33.333 0.00 0.00 0.00 4.04
2094 2208 7.772332 TGAAACCTTAGAAAATATCGAGAGC 57.228 36.000 0.00 0.00 0.00 4.09
2095 2209 7.327975 TGAAACCTTAGAAAATATCGAGAGCA 58.672 34.615 0.00 0.00 0.00 4.26
2096 2210 7.822334 TGAAACCTTAGAAAATATCGAGAGCAA 59.178 33.333 0.00 0.00 0.00 3.91
2097 2211 8.561738 AAACCTTAGAAAATATCGAGAGCAAA 57.438 30.769 0.00 0.00 0.00 3.68
2098 2212 7.778470 ACCTTAGAAAATATCGAGAGCAAAG 57.222 36.000 0.00 0.00 0.00 2.77
2099 2213 7.331791 ACCTTAGAAAATATCGAGAGCAAAGT 58.668 34.615 0.00 0.00 0.00 2.66
2100 2214 8.475639 ACCTTAGAAAATATCGAGAGCAAAGTA 58.524 33.333 0.00 0.00 0.00 2.24
2101 2215 9.314321 CCTTAGAAAATATCGAGAGCAAAGTAA 57.686 33.333 0.00 0.00 0.00 2.24
2105 2219 9.092876 AGAAAATATCGAGAGCAAAGTAAGAAG 57.907 33.333 0.00 0.00 0.00 2.85
2106 2220 7.778470 AAATATCGAGAGCAAAGTAAGAAGG 57.222 36.000 0.00 0.00 0.00 3.46
2107 2221 4.810191 ATCGAGAGCAAAGTAAGAAGGT 57.190 40.909 0.00 0.00 0.00 3.50
2108 2222 3.914312 TCGAGAGCAAAGTAAGAAGGTG 58.086 45.455 0.00 0.00 0.00 4.00
2109 2223 2.413453 CGAGAGCAAAGTAAGAAGGTGC 59.587 50.000 0.00 0.00 35.41 5.01
2110 2224 3.403038 GAGAGCAAAGTAAGAAGGTGCA 58.597 45.455 0.00 0.00 37.68 4.57
2111 2225 3.815401 GAGAGCAAAGTAAGAAGGTGCAA 59.185 43.478 0.00 0.00 37.68 4.08
2112 2226 4.207165 AGAGCAAAGTAAGAAGGTGCAAA 58.793 39.130 0.00 0.00 37.68 3.68
2113 2227 4.644685 AGAGCAAAGTAAGAAGGTGCAAAA 59.355 37.500 0.00 0.00 37.68 2.44
2114 2228 5.302823 AGAGCAAAGTAAGAAGGTGCAAAAT 59.697 36.000 0.00 0.00 37.68 1.82
2115 2229 6.490040 AGAGCAAAGTAAGAAGGTGCAAAATA 59.510 34.615 0.00 0.00 37.68 1.40
2116 2230 6.681777 AGCAAAGTAAGAAGGTGCAAAATAG 58.318 36.000 0.00 0.00 37.68 1.73
2117 2231 6.490040 AGCAAAGTAAGAAGGTGCAAAATAGA 59.510 34.615 0.00 0.00 37.68 1.98
2118 2232 7.014230 AGCAAAGTAAGAAGGTGCAAAATAGAA 59.986 33.333 0.00 0.00 37.68 2.10
2119 2233 7.327032 GCAAAGTAAGAAGGTGCAAAATAGAAG 59.673 37.037 0.00 0.00 35.28 2.85
2120 2234 8.352942 CAAAGTAAGAAGGTGCAAAATAGAAGT 58.647 33.333 0.00 0.00 0.00 3.01
2121 2235 8.465273 AAGTAAGAAGGTGCAAAATAGAAGTT 57.535 30.769 0.00 0.00 0.00 2.66
2122 2236 8.465273 AGTAAGAAGGTGCAAAATAGAAGTTT 57.535 30.769 0.00 0.00 0.00 2.66
2123 2237 8.568794 AGTAAGAAGGTGCAAAATAGAAGTTTC 58.431 33.333 0.00 0.00 0.00 2.78
2124 2238 6.959639 AGAAGGTGCAAAATAGAAGTTTCA 57.040 33.333 0.00 0.00 0.00 2.69
2125 2239 7.346751 AGAAGGTGCAAAATAGAAGTTTCAA 57.653 32.000 0.00 0.00 0.00 2.69
2126 2240 7.428826 AGAAGGTGCAAAATAGAAGTTTCAAG 58.571 34.615 0.00 0.00 0.00 3.02
2127 2241 5.532557 AGGTGCAAAATAGAAGTTTCAAGC 58.467 37.500 0.00 0.00 0.00 4.01
2128 2242 4.382754 GGTGCAAAATAGAAGTTTCAAGCG 59.617 41.667 0.00 0.00 0.00 4.68
2129 2243 3.980775 TGCAAAATAGAAGTTTCAAGCGC 59.019 39.130 0.00 0.00 0.00 5.92
2130 2244 3.980775 GCAAAATAGAAGTTTCAAGCGCA 59.019 39.130 11.47 0.00 0.00 6.09
2131 2245 4.622740 GCAAAATAGAAGTTTCAAGCGCAT 59.377 37.500 11.47 0.00 0.00 4.73
2132 2246 5.799936 GCAAAATAGAAGTTTCAAGCGCATA 59.200 36.000 11.47 0.00 0.00 3.14
2133 2247 6.021153 GCAAAATAGAAGTTTCAAGCGCATAG 60.021 38.462 11.47 0.00 0.00 2.23
2134 2248 5.741388 AATAGAAGTTTCAAGCGCATAGG 57.259 39.130 11.47 0.00 0.00 2.57
2135 2249 1.740025 AGAAGTTTCAAGCGCATAGGC 59.260 47.619 11.47 0.00 0.00 3.93
2136 2250 1.468520 GAAGTTTCAAGCGCATAGGCA 59.531 47.619 11.47 0.00 41.24 4.75
2137 2251 1.533625 AGTTTCAAGCGCATAGGCAA 58.466 45.000 11.47 0.00 41.24 4.52
2138 2252 2.094675 AGTTTCAAGCGCATAGGCAAT 58.905 42.857 11.47 0.00 41.24 3.56
2139 2253 2.098117 AGTTTCAAGCGCATAGGCAATC 59.902 45.455 11.47 0.00 41.24 2.67
2140 2254 0.657312 TTCAAGCGCATAGGCAATCG 59.343 50.000 11.47 0.00 41.24 3.34
2141 2255 0.461870 TCAAGCGCATAGGCAATCGT 60.462 50.000 11.47 0.00 41.24 3.73
2142 2256 0.378257 CAAGCGCATAGGCAATCGTT 59.622 50.000 11.47 0.00 41.24 3.85
2143 2257 1.094785 AAGCGCATAGGCAATCGTTT 58.905 45.000 11.47 0.00 41.24 3.60
2144 2258 0.378257 AGCGCATAGGCAATCGTTTG 59.622 50.000 11.47 1.73 41.24 2.93
2145 2259 0.098728 GCGCATAGGCAATCGTTTGT 59.901 50.000 0.30 0.00 41.24 2.83
2146 2260 1.467374 GCGCATAGGCAATCGTTTGTT 60.467 47.619 0.30 0.46 41.24 2.83
2147 2261 2.176369 CGCATAGGCAATCGTTTGTTG 58.824 47.619 7.97 3.17 41.24 3.33
2152 2266 3.863681 GCAATCGTTTGTTGCCTGA 57.136 47.368 7.97 0.00 44.65 3.86
2153 2267 2.132740 GCAATCGTTTGTTGCCTGAA 57.867 45.000 7.97 0.00 44.65 3.02
2154 2268 2.053627 GCAATCGTTTGTTGCCTGAAG 58.946 47.619 7.97 0.00 44.65 3.02
2155 2269 2.053627 CAATCGTTTGTTGCCTGAAGC 58.946 47.619 0.00 0.00 44.14 3.86
2164 2278 4.361253 GCCTGAAGCGAAGTGTGA 57.639 55.556 0.00 0.00 0.00 3.58
2165 2279 2.616969 GCCTGAAGCGAAGTGTGAA 58.383 52.632 0.00 0.00 0.00 3.18
2166 2280 0.944386 GCCTGAAGCGAAGTGTGAAA 59.056 50.000 0.00 0.00 0.00 2.69
2167 2281 1.069636 GCCTGAAGCGAAGTGTGAAAG 60.070 52.381 0.00 0.00 0.00 2.62
2168 2282 1.532868 CCTGAAGCGAAGTGTGAAAGG 59.467 52.381 0.00 0.00 0.00 3.11
2169 2283 1.532868 CTGAAGCGAAGTGTGAAAGGG 59.467 52.381 0.00 0.00 0.00 3.95
2170 2284 0.875059 GAAGCGAAGTGTGAAAGGGG 59.125 55.000 0.00 0.00 0.00 4.79
2171 2285 0.182775 AAGCGAAGTGTGAAAGGGGT 59.817 50.000 0.00 0.00 0.00 4.95
2172 2286 0.182775 AGCGAAGTGTGAAAGGGGTT 59.817 50.000 0.00 0.00 0.00 4.11
2173 2287 0.591659 GCGAAGTGTGAAAGGGGTTC 59.408 55.000 0.00 0.00 36.70 3.62
2174 2288 1.961793 CGAAGTGTGAAAGGGGTTCA 58.038 50.000 0.00 0.00 44.20 3.18
2181 2295 2.978156 TGAAAGGGGTTCAGAGCAAT 57.022 45.000 0.00 0.00 41.47 3.56
2182 2296 2.517959 TGAAAGGGGTTCAGAGCAATG 58.482 47.619 0.00 0.00 41.47 2.82
2183 2297 1.821136 GAAAGGGGTTCAGAGCAATGG 59.179 52.381 0.00 0.00 36.15 3.16
2184 2298 0.040204 AAGGGGTTCAGAGCAATGGG 59.960 55.000 0.00 0.00 0.00 4.00
2185 2299 0.846427 AGGGGTTCAGAGCAATGGGA 60.846 55.000 0.00 0.00 0.00 4.37
2186 2300 0.039618 GGGGTTCAGAGCAATGGGAA 59.960 55.000 0.00 0.00 0.00 3.97
2187 2301 1.342374 GGGGTTCAGAGCAATGGGAAT 60.342 52.381 0.00 0.00 0.00 3.01
2188 2302 2.091885 GGGGTTCAGAGCAATGGGAATA 60.092 50.000 0.00 0.00 0.00 1.75
2189 2303 3.627237 GGGGTTCAGAGCAATGGGAATAA 60.627 47.826 0.00 0.00 0.00 1.40
2190 2304 3.633986 GGGTTCAGAGCAATGGGAATAAG 59.366 47.826 0.00 0.00 0.00 1.73
2191 2305 4.273318 GGTTCAGAGCAATGGGAATAAGT 58.727 43.478 0.00 0.00 0.00 2.24
2192 2306 5.437060 GGTTCAGAGCAATGGGAATAAGTA 58.563 41.667 0.00 0.00 0.00 2.24
2193 2307 6.064717 GGTTCAGAGCAATGGGAATAAGTAT 58.935 40.000 0.00 0.00 0.00 2.12
2194 2308 6.547510 GGTTCAGAGCAATGGGAATAAGTATT 59.452 38.462 0.00 0.00 0.00 1.89
2195 2309 7.420800 GTTCAGAGCAATGGGAATAAGTATTG 58.579 38.462 0.00 0.00 34.51 1.90
2198 2312 4.568152 GCAATGGGAATAAGTATTGCGT 57.432 40.909 0.00 0.00 43.78 5.24
2199 2313 4.537015 GCAATGGGAATAAGTATTGCGTC 58.463 43.478 0.00 0.00 43.78 5.19
2200 2314 4.275936 GCAATGGGAATAAGTATTGCGTCT 59.724 41.667 0.00 0.00 43.78 4.18
2201 2315 5.751680 CAATGGGAATAAGTATTGCGTCTG 58.248 41.667 0.00 0.00 35.21 3.51
2202 2316 4.746535 TGGGAATAAGTATTGCGTCTGA 57.253 40.909 0.00 0.00 35.21 3.27
2203 2317 5.290493 TGGGAATAAGTATTGCGTCTGAT 57.710 39.130 0.00 0.00 35.21 2.90
2204 2318 6.413783 TGGGAATAAGTATTGCGTCTGATA 57.586 37.500 0.00 0.00 35.21 2.15
2205 2319 6.220930 TGGGAATAAGTATTGCGTCTGATAC 58.779 40.000 0.00 0.00 35.21 2.24
2206 2320 5.638234 GGGAATAAGTATTGCGTCTGATACC 59.362 44.000 0.00 0.00 35.21 2.73
2207 2321 6.220930 GGAATAAGTATTGCGTCTGATACCA 58.779 40.000 0.00 0.00 30.74 3.25
2208 2322 6.366332 GGAATAAGTATTGCGTCTGATACCAG 59.634 42.308 0.00 0.00 41.74 4.00
2209 2323 6.650427 ATAAGTATTGCGTCTGATACCAGA 57.350 37.500 0.00 0.00 46.48 3.86
2223 2337 8.750515 TCTGATACCAGATAGATGATCTCATC 57.249 38.462 11.44 11.44 46.11 2.92
2232 2346 3.037431 GATGATCTCATCGGAAGGTGG 57.963 52.381 4.52 0.00 44.13 4.61
2233 2347 0.465705 TGATCTCATCGGAAGGTGGC 59.534 55.000 0.00 0.00 44.13 5.01
2234 2348 0.755686 GATCTCATCGGAAGGTGGCT 59.244 55.000 0.00 0.00 44.13 4.75
2235 2349 0.755686 ATCTCATCGGAAGGTGGCTC 59.244 55.000 0.00 0.00 44.13 4.70
2236 2350 1.227089 CTCATCGGAAGGTGGCTCG 60.227 63.158 0.00 0.00 44.13 5.03
2237 2351 1.949847 CTCATCGGAAGGTGGCTCGT 61.950 60.000 0.00 0.00 44.13 4.18
2238 2352 1.811266 CATCGGAAGGTGGCTCGTG 60.811 63.158 0.00 0.00 38.98 4.35
2239 2353 1.982395 ATCGGAAGGTGGCTCGTGA 60.982 57.895 0.00 0.00 0.00 4.35
2240 2354 1.541310 ATCGGAAGGTGGCTCGTGAA 61.541 55.000 0.00 0.00 0.00 3.18
2241 2355 1.079127 CGGAAGGTGGCTCGTGAAT 60.079 57.895 0.00 0.00 0.00 2.57
2242 2356 0.673644 CGGAAGGTGGCTCGTGAATT 60.674 55.000 0.00 0.00 0.00 2.17
2243 2357 1.404986 CGGAAGGTGGCTCGTGAATTA 60.405 52.381 0.00 0.00 0.00 1.40
2244 2358 2.007608 GGAAGGTGGCTCGTGAATTAC 58.992 52.381 0.00 0.00 0.00 1.89
2245 2359 2.614481 GGAAGGTGGCTCGTGAATTACA 60.614 50.000 0.00 0.00 0.00 2.41
2246 2360 2.094762 AGGTGGCTCGTGAATTACAC 57.905 50.000 0.00 0.00 45.11 2.90
2256 2370 1.803334 TGAATTACACACGAGGCCAC 58.197 50.000 5.01 0.00 0.00 5.01
2257 2371 1.070914 TGAATTACACACGAGGCCACA 59.929 47.619 5.01 0.00 0.00 4.17
2258 2372 1.463444 GAATTACACACGAGGCCACAC 59.537 52.381 5.01 0.00 0.00 3.82
2259 2373 0.669318 ATTACACACGAGGCCACACG 60.669 55.000 5.01 10.64 36.73 4.49
2260 2374 3.851845 TACACACGAGGCCACACGC 62.852 63.158 5.01 0.00 33.86 5.34
2266 2380 4.373116 GAGGCCACACGCGAGGAA 62.373 66.667 15.93 0.00 38.94 3.36
2267 2381 3.665675 GAGGCCACACGCGAGGAAT 62.666 63.158 15.93 3.60 38.94 3.01
2268 2382 2.185867 GGCCACACGCGAGGAATA 59.814 61.111 15.93 0.00 38.94 1.75
2269 2383 1.448893 GGCCACACGCGAGGAATAA 60.449 57.895 15.93 0.00 38.94 1.40
2270 2384 1.702491 GGCCACACGCGAGGAATAAC 61.702 60.000 15.93 0.00 38.94 1.89
2271 2385 0.739813 GCCACACGCGAGGAATAACT 60.740 55.000 15.93 0.00 0.00 2.24
2272 2386 1.722011 CCACACGCGAGGAATAACTT 58.278 50.000 15.93 0.00 0.00 2.66
2273 2387 2.073816 CCACACGCGAGGAATAACTTT 58.926 47.619 15.93 0.00 0.00 2.66
2274 2388 2.159707 CCACACGCGAGGAATAACTTTG 60.160 50.000 15.93 0.00 0.00 2.77
2275 2389 2.073816 ACACGCGAGGAATAACTTTGG 58.926 47.619 15.93 0.00 0.00 3.28
2276 2390 1.396996 CACGCGAGGAATAACTTTGGG 59.603 52.381 15.93 0.00 0.00 4.12
2277 2391 1.276989 ACGCGAGGAATAACTTTGGGA 59.723 47.619 15.93 0.00 0.00 4.37
2278 2392 2.289819 ACGCGAGGAATAACTTTGGGAA 60.290 45.455 15.93 0.00 0.00 3.97
2279 2393 2.095372 CGCGAGGAATAACTTTGGGAAC 59.905 50.000 0.00 0.00 0.00 3.62
2280 2394 3.078837 GCGAGGAATAACTTTGGGAACA 58.921 45.455 0.00 0.00 39.83 3.18
2281 2395 3.127030 GCGAGGAATAACTTTGGGAACAG 59.873 47.826 0.00 0.00 44.54 3.16
2282 2396 3.689649 CGAGGAATAACTTTGGGAACAGG 59.310 47.826 0.00 0.00 44.54 4.00
2283 2397 4.564821 CGAGGAATAACTTTGGGAACAGGA 60.565 45.833 0.00 0.00 44.54 3.86
2284 2398 4.923415 AGGAATAACTTTGGGAACAGGAG 58.077 43.478 0.00 0.00 44.54 3.69
2285 2399 4.017126 GGAATAACTTTGGGAACAGGAGG 58.983 47.826 0.00 0.00 44.54 4.30
2286 2400 4.508584 GGAATAACTTTGGGAACAGGAGGT 60.509 45.833 0.00 0.00 44.54 3.85
2287 2401 2.364972 AACTTTGGGAACAGGAGGTG 57.635 50.000 0.00 0.00 44.54 4.00
2288 2402 1.222567 ACTTTGGGAACAGGAGGTGT 58.777 50.000 0.00 0.00 44.54 4.16
2289 2403 2.414612 ACTTTGGGAACAGGAGGTGTA 58.585 47.619 0.00 0.00 44.54 2.90
2290 2404 2.105993 ACTTTGGGAACAGGAGGTGTAC 59.894 50.000 0.00 0.00 44.54 2.90
2291 2405 1.809133 TTGGGAACAGGAGGTGTACA 58.191 50.000 0.00 0.00 44.54 2.90
2292 2406 1.348064 TGGGAACAGGAGGTGTACAG 58.652 55.000 0.00 0.00 39.03 2.74
2293 2407 0.613777 GGGAACAGGAGGTGTACAGG 59.386 60.000 0.00 0.00 39.03 4.00
2294 2408 1.640917 GGAACAGGAGGTGTACAGGA 58.359 55.000 0.00 0.00 39.03 3.86
2295 2409 1.550976 GGAACAGGAGGTGTACAGGAG 59.449 57.143 0.00 0.00 39.03 3.69
2296 2410 2.526432 GAACAGGAGGTGTACAGGAGA 58.474 52.381 0.00 0.00 39.03 3.71
2297 2411 2.223803 ACAGGAGGTGTACAGGAGAG 57.776 55.000 0.00 0.00 37.75 3.20
2298 2412 1.429687 ACAGGAGGTGTACAGGAGAGT 59.570 52.381 0.00 0.00 37.75 3.24
2299 2413 2.096248 CAGGAGGTGTACAGGAGAGTC 58.904 57.143 0.00 0.00 0.00 3.36
2300 2414 1.711375 AGGAGGTGTACAGGAGAGTCA 59.289 52.381 0.00 0.00 0.00 3.41
2301 2415 2.096248 GGAGGTGTACAGGAGAGTCAG 58.904 57.143 0.00 0.00 0.00 3.51
2302 2416 2.096248 GAGGTGTACAGGAGAGTCAGG 58.904 57.143 0.00 0.00 0.00 3.86
2303 2417 1.429687 AGGTGTACAGGAGAGTCAGGT 59.570 52.381 0.00 0.00 0.00 4.00
2304 2418 2.158295 AGGTGTACAGGAGAGTCAGGTT 60.158 50.000 0.00 0.00 0.00 3.50
2305 2419 2.633481 GGTGTACAGGAGAGTCAGGTTT 59.367 50.000 0.00 0.00 0.00 3.27
2306 2420 3.306156 GGTGTACAGGAGAGTCAGGTTTC 60.306 52.174 0.00 0.00 0.00 2.78
2307 2421 2.557056 TGTACAGGAGAGTCAGGTTTCG 59.443 50.000 0.00 0.00 0.00 3.46
2308 2422 1.996798 ACAGGAGAGTCAGGTTTCGA 58.003 50.000 0.00 0.00 0.00 3.71
2309 2423 2.530701 ACAGGAGAGTCAGGTTTCGAT 58.469 47.619 0.00 0.00 0.00 3.59
2310 2424 2.494073 ACAGGAGAGTCAGGTTTCGATC 59.506 50.000 0.00 0.00 0.00 3.69
2311 2425 2.757868 CAGGAGAGTCAGGTTTCGATCT 59.242 50.000 0.00 0.00 0.00 2.75
2312 2426 3.194542 CAGGAGAGTCAGGTTTCGATCTT 59.805 47.826 0.00 0.00 0.00 2.40
2313 2427 3.194542 AGGAGAGTCAGGTTTCGATCTTG 59.805 47.826 0.00 0.00 0.00 3.02
2314 2428 3.056465 GGAGAGTCAGGTTTCGATCTTGT 60.056 47.826 0.00 0.00 0.00 3.16
2315 2429 3.919216 AGAGTCAGGTTTCGATCTTGTG 58.081 45.455 0.00 0.00 0.00 3.33
2316 2430 3.574396 AGAGTCAGGTTTCGATCTTGTGA 59.426 43.478 0.00 0.00 0.00 3.58
2317 2431 4.039245 AGAGTCAGGTTTCGATCTTGTGAA 59.961 41.667 0.00 0.00 0.00 3.18
2318 2432 4.703897 AGTCAGGTTTCGATCTTGTGAAA 58.296 39.130 0.00 0.00 0.00 2.69
2324 2438 4.527564 GTTTCGATCTTGTGAAACTGTGG 58.472 43.478 13.53 0.00 46.49 4.17
2325 2439 2.766313 TCGATCTTGTGAAACTGTGGG 58.234 47.619 0.00 0.00 38.04 4.61
2326 2440 2.104111 TCGATCTTGTGAAACTGTGGGT 59.896 45.455 0.00 0.00 38.04 4.51
2327 2441 2.878406 CGATCTTGTGAAACTGTGGGTT 59.122 45.455 0.00 0.00 40.28 4.11
2328 2442 4.062293 CGATCTTGTGAAACTGTGGGTTA 58.938 43.478 0.00 0.00 37.12 2.85
2329 2443 4.695455 CGATCTTGTGAAACTGTGGGTTAT 59.305 41.667 0.00 0.00 37.12 1.89
2330 2444 5.390885 CGATCTTGTGAAACTGTGGGTTATG 60.391 44.000 0.00 0.00 37.12 1.90
2331 2445 4.141287 TCTTGTGAAACTGTGGGTTATGG 58.859 43.478 0.00 0.00 37.12 2.74
2332 2446 2.870175 TGTGAAACTGTGGGTTATGGG 58.130 47.619 0.00 0.00 37.12 4.00
2333 2447 1.544246 GTGAAACTGTGGGTTATGGGC 59.456 52.381 0.00 0.00 37.12 5.36
2334 2448 1.182667 GAAACTGTGGGTTATGGGCC 58.817 55.000 0.00 0.00 37.12 5.80
2335 2449 0.252057 AAACTGTGGGTTATGGGCCC 60.252 55.000 17.59 17.59 46.26 5.80
2357 2471 2.524306 CCATGTGGGTTAAAAGCAGGA 58.476 47.619 0.00 0.00 0.00 3.86
2358 2472 2.896685 CCATGTGGGTTAAAAGCAGGAA 59.103 45.455 0.00 0.00 0.00 3.36
2359 2473 3.056607 CCATGTGGGTTAAAAGCAGGAAG 60.057 47.826 0.00 0.00 0.00 3.46
2360 2474 2.593026 TGTGGGTTAAAAGCAGGAAGG 58.407 47.619 0.00 0.00 0.00 3.46
2361 2475 1.893137 GTGGGTTAAAAGCAGGAAGGG 59.107 52.381 0.00 0.00 0.00 3.95
2362 2476 0.895530 GGGTTAAAAGCAGGAAGGGC 59.104 55.000 0.00 0.00 0.00 5.19
2363 2477 0.526211 GGTTAAAAGCAGGAAGGGCG 59.474 55.000 0.00 0.00 36.08 6.13
2364 2478 0.526211 GTTAAAAGCAGGAAGGGCGG 59.474 55.000 0.00 0.00 36.08 6.13
2365 2479 0.111639 TTAAAAGCAGGAAGGGCGGT 59.888 50.000 0.00 0.00 36.08 5.68
2366 2480 0.608035 TAAAAGCAGGAAGGGCGGTG 60.608 55.000 0.00 0.00 36.08 4.94
2367 2481 2.351924 AAAAGCAGGAAGGGCGGTGA 62.352 55.000 0.00 0.00 36.08 4.02
2368 2482 3.553095 AAGCAGGAAGGGCGGTGAC 62.553 63.158 0.00 0.00 36.08 3.67
2369 2483 4.329545 GCAGGAAGGGCGGTGACA 62.330 66.667 0.00 0.00 0.00 3.58
2370 2484 2.671070 CAGGAAGGGCGGTGACAT 59.329 61.111 0.00 0.00 0.00 3.06
2371 2485 1.450312 CAGGAAGGGCGGTGACATC 60.450 63.158 0.00 0.00 0.00 3.06
2372 2486 1.613630 AGGAAGGGCGGTGACATCT 60.614 57.895 0.00 0.00 0.00 2.90
2373 2487 1.201429 AGGAAGGGCGGTGACATCTT 61.201 55.000 0.00 0.00 0.00 2.40
2374 2488 1.026718 GGAAGGGCGGTGACATCTTG 61.027 60.000 0.00 0.00 0.00 3.02
2375 2489 1.648467 GAAGGGCGGTGACATCTTGC 61.648 60.000 0.00 0.00 0.00 4.01
2376 2490 2.359850 GGGCGGTGACATCTTGCA 60.360 61.111 0.00 0.00 0.00 4.08
2377 2491 1.750399 GGGCGGTGACATCTTGCAT 60.750 57.895 0.00 0.00 0.00 3.96
2378 2492 1.430632 GGCGGTGACATCTTGCATG 59.569 57.895 0.00 0.00 0.00 4.06
2379 2493 1.430632 GCGGTGACATCTTGCATGG 59.569 57.895 0.00 0.00 0.00 3.66
2380 2494 1.308069 GCGGTGACATCTTGCATGGT 61.308 55.000 0.00 0.00 0.00 3.55
2381 2495 0.729116 CGGTGACATCTTGCATGGTC 59.271 55.000 0.00 1.43 0.00 4.02
2382 2496 1.825090 GGTGACATCTTGCATGGTCA 58.175 50.000 7.35 7.35 37.89 4.02
2383 2497 2.372264 GGTGACATCTTGCATGGTCAT 58.628 47.619 12.55 0.00 41.73 3.06
2384 2498 2.098607 GGTGACATCTTGCATGGTCATG 59.901 50.000 12.55 6.59 41.73 3.07
2385 2499 3.011818 GTGACATCTTGCATGGTCATGA 58.988 45.455 14.43 0.00 41.73 3.07
2386 2500 3.630769 GTGACATCTTGCATGGTCATGAT 59.369 43.478 14.43 1.00 41.73 2.45
2387 2501 4.818005 GTGACATCTTGCATGGTCATGATA 59.182 41.667 14.43 0.00 41.73 2.15
2388 2502 5.049612 GTGACATCTTGCATGGTCATGATAG 60.050 44.000 14.43 9.84 41.73 2.08
2389 2503 3.819337 ACATCTTGCATGGTCATGATAGC 59.181 43.478 14.43 1.64 41.20 2.97
2390 2504 3.564053 TCTTGCATGGTCATGATAGCA 57.436 42.857 14.43 4.46 41.20 3.49
2391 2505 3.888583 TCTTGCATGGTCATGATAGCAA 58.111 40.909 19.08 19.08 41.20 3.91
2393 2507 2.578786 TGCATGGTCATGATAGCAAGG 58.421 47.619 14.43 0.00 41.20 3.61
2394 2508 1.268899 GCATGGTCATGATAGCAAGGC 59.731 52.381 14.43 0.00 41.20 4.35
2395 2509 2.578786 CATGGTCATGATAGCAAGGCA 58.421 47.619 0.00 0.00 41.20 4.75
2396 2510 3.154710 CATGGTCATGATAGCAAGGCAT 58.845 45.455 0.00 0.00 41.20 4.40
2397 2511 4.329392 CATGGTCATGATAGCAAGGCATA 58.671 43.478 0.00 0.00 41.20 3.14
2398 2512 4.645863 TGGTCATGATAGCAAGGCATAT 57.354 40.909 0.00 0.00 0.00 1.78
2399 2513 4.582869 TGGTCATGATAGCAAGGCATATC 58.417 43.478 0.00 0.00 0.00 1.63
2400 2514 4.041938 TGGTCATGATAGCAAGGCATATCA 59.958 41.667 0.00 10.53 41.36 2.15
2401 2515 4.634883 GGTCATGATAGCAAGGCATATCAG 59.365 45.833 0.00 7.73 40.67 2.90
2402 2516 5.485620 GTCATGATAGCAAGGCATATCAGA 58.514 41.667 0.00 9.04 40.67 3.27
2403 2517 5.581479 GTCATGATAGCAAGGCATATCAGAG 59.419 44.000 0.00 9.34 40.67 3.35
2404 2518 4.548451 TGATAGCAAGGCATATCAGAGG 57.452 45.455 0.00 0.00 34.32 3.69
2405 2519 3.262660 TGATAGCAAGGCATATCAGAGGG 59.737 47.826 0.00 0.00 34.32 4.30
2406 2520 1.516110 AGCAAGGCATATCAGAGGGT 58.484 50.000 0.00 0.00 0.00 4.34
2407 2521 2.694397 AGCAAGGCATATCAGAGGGTA 58.306 47.619 0.00 0.00 0.00 3.69
2408 2522 2.636893 AGCAAGGCATATCAGAGGGTAG 59.363 50.000 0.00 0.00 0.00 3.18
2409 2523 2.873649 GCAAGGCATATCAGAGGGTAGC 60.874 54.545 0.00 0.00 0.00 3.58
2410 2524 1.650528 AGGCATATCAGAGGGTAGCC 58.349 55.000 1.60 1.60 40.85 3.93
2411 2525 1.150986 AGGCATATCAGAGGGTAGCCT 59.849 52.381 14.79 14.79 45.49 4.58
2412 2526 1.277557 GGCATATCAGAGGGTAGCCTG 59.722 57.143 20.52 5.98 37.67 4.85
2413 2527 1.974236 GCATATCAGAGGGTAGCCTGT 59.026 52.381 20.52 12.44 0.00 4.00
2414 2528 2.028567 GCATATCAGAGGGTAGCCTGTC 60.029 54.545 20.52 5.00 0.00 3.51
2415 2529 3.234353 CATATCAGAGGGTAGCCTGTCA 58.766 50.000 20.52 0.00 0.00 3.58
2416 2530 1.786937 ATCAGAGGGTAGCCTGTCAG 58.213 55.000 20.52 3.43 0.00 3.51
2417 2531 0.409876 TCAGAGGGTAGCCTGTCAGT 59.590 55.000 20.52 0.00 0.00 3.41
2418 2532 1.203187 TCAGAGGGTAGCCTGTCAGTT 60.203 52.381 20.52 0.00 0.00 3.16
2419 2533 2.042569 TCAGAGGGTAGCCTGTCAGTTA 59.957 50.000 20.52 0.00 0.00 2.24
2420 2534 3.034635 CAGAGGGTAGCCTGTCAGTTAT 58.965 50.000 20.52 0.00 0.00 1.89
2421 2535 3.034635 AGAGGGTAGCCTGTCAGTTATG 58.965 50.000 20.52 0.00 0.00 1.90
2422 2536 2.766828 GAGGGTAGCCTGTCAGTTATGT 59.233 50.000 20.52 0.00 0.00 2.29
2423 2537 2.766828 AGGGTAGCCTGTCAGTTATGTC 59.233 50.000 14.01 0.00 0.00 3.06
2424 2538 2.481449 GGGTAGCCTGTCAGTTATGTCG 60.481 54.545 2.95 0.00 0.00 4.35
2425 2539 2.481449 GGTAGCCTGTCAGTTATGTCGG 60.481 54.545 0.00 0.00 0.00 4.79
2426 2540 0.108138 AGCCTGTCAGTTATGTCGGC 60.108 55.000 0.00 0.00 35.83 5.54
2427 2541 0.391130 GCCTGTCAGTTATGTCGGCA 60.391 55.000 0.00 0.00 35.74 5.69
2428 2542 1.943968 GCCTGTCAGTTATGTCGGCAA 60.944 52.381 0.00 0.00 35.74 4.52
2429 2543 1.732259 CCTGTCAGTTATGTCGGCAAC 59.268 52.381 0.00 0.00 0.00 4.17
2430 2544 1.732259 CTGTCAGTTATGTCGGCAACC 59.268 52.381 0.00 0.00 0.00 3.77
2431 2545 1.070914 TGTCAGTTATGTCGGCAACCA 59.929 47.619 0.00 0.00 0.00 3.67
2432 2546 1.463444 GTCAGTTATGTCGGCAACCAC 59.537 52.381 0.00 0.00 0.00 4.16
2433 2547 1.070914 TCAGTTATGTCGGCAACCACA 59.929 47.619 0.00 0.00 0.00 4.17
2434 2548 2.083774 CAGTTATGTCGGCAACCACAT 58.916 47.619 0.00 0.00 37.08 3.21
2435 2549 2.095853 CAGTTATGTCGGCAACCACATC 59.904 50.000 0.00 0.00 34.92 3.06
2436 2550 1.062002 GTTATGTCGGCAACCACATCG 59.938 52.381 0.00 0.00 34.92 3.84
2437 2551 0.461163 TATGTCGGCAACCACATCGG 60.461 55.000 0.00 0.00 42.50 4.18
2446 2560 4.954933 CCACATCGGTACCAAGGG 57.045 61.111 13.54 1.32 0.00 3.95
2447 2561 1.451387 CCACATCGGTACCAAGGGC 60.451 63.158 13.54 0.00 0.00 5.19
2448 2562 1.813753 CACATCGGTACCAAGGGCG 60.814 63.158 13.54 0.00 0.00 6.13
2449 2563 1.985662 ACATCGGTACCAAGGGCGA 60.986 57.895 13.54 2.15 0.00 5.54
2450 2564 1.227263 CATCGGTACCAAGGGCGAG 60.227 63.158 13.54 0.00 0.00 5.03
2451 2565 2.432300 ATCGGTACCAAGGGCGAGG 61.432 63.158 13.54 0.00 0.00 4.63
2452 2566 4.157120 CGGTACCAAGGGCGAGGG 62.157 72.222 13.54 0.00 0.00 4.30
2453 2567 2.686106 GGTACCAAGGGCGAGGGA 60.686 66.667 7.15 0.00 0.00 4.20
2454 2568 2.582978 GTACCAAGGGCGAGGGAC 59.417 66.667 0.00 0.00 0.00 4.46
2455 2569 3.072468 TACCAAGGGCGAGGGACG 61.072 66.667 0.00 0.00 45.66 4.79
2456 2570 3.588817 TACCAAGGGCGAGGGACGA 62.589 63.158 0.00 0.00 45.77 4.20
2457 2571 3.702048 CCAAGGGCGAGGGACGAA 61.702 66.667 0.00 0.00 45.77 3.85
2458 2572 2.125512 CAAGGGCGAGGGACGAAG 60.126 66.667 0.00 0.00 45.77 3.79
2459 2573 2.283676 AAGGGCGAGGGACGAAGA 60.284 61.111 0.00 0.00 45.77 2.87
2460 2574 2.352032 AAGGGCGAGGGACGAAGAG 61.352 63.158 0.00 0.00 45.77 2.85
2461 2575 2.754658 GGGCGAGGGACGAAGAGA 60.755 66.667 0.00 0.00 45.77 3.10
2462 2576 2.348888 GGGCGAGGGACGAAGAGAA 61.349 63.158 0.00 0.00 45.77 2.87
2463 2577 1.153804 GGCGAGGGACGAAGAGAAC 60.154 63.158 0.00 0.00 45.77 3.01
2464 2578 1.153804 GCGAGGGACGAAGAGAACC 60.154 63.158 0.00 0.00 45.77 3.62
2465 2579 1.874345 GCGAGGGACGAAGAGAACCA 61.874 60.000 0.00 0.00 45.77 3.67
2466 2580 0.818296 CGAGGGACGAAGAGAACCAT 59.182 55.000 0.00 0.00 45.77 3.55
2467 2581 1.204941 CGAGGGACGAAGAGAACCATT 59.795 52.381 0.00 0.00 45.77 3.16
2468 2582 2.353803 CGAGGGACGAAGAGAACCATTT 60.354 50.000 0.00 0.00 45.77 2.32
2469 2583 3.676093 GAGGGACGAAGAGAACCATTTT 58.324 45.455 0.00 0.00 0.00 1.82
2470 2584 3.676093 AGGGACGAAGAGAACCATTTTC 58.324 45.455 0.00 0.00 0.00 2.29
2471 2585 2.747989 GGGACGAAGAGAACCATTTTCC 59.252 50.000 0.00 0.00 0.00 3.13
2472 2586 3.559384 GGGACGAAGAGAACCATTTTCCT 60.559 47.826 0.00 0.00 0.00 3.36
2473 2587 3.437049 GGACGAAGAGAACCATTTTCCTG 59.563 47.826 0.00 0.00 0.00 3.86
2474 2588 2.814336 ACGAAGAGAACCATTTTCCTGC 59.186 45.455 0.00 0.00 0.00 4.85
2475 2589 3.077359 CGAAGAGAACCATTTTCCTGCT 58.923 45.455 0.00 0.00 0.00 4.24
2476 2590 3.126000 CGAAGAGAACCATTTTCCTGCTC 59.874 47.826 0.00 0.00 0.00 4.26
2477 2591 2.704572 AGAGAACCATTTTCCTGCTCG 58.295 47.619 0.00 0.00 0.00 5.03
2478 2592 2.039084 AGAGAACCATTTTCCTGCTCGT 59.961 45.455 0.00 0.00 0.00 4.18
2479 2593 2.814336 GAGAACCATTTTCCTGCTCGTT 59.186 45.455 0.00 0.00 0.00 3.85
2480 2594 2.554032 AGAACCATTTTCCTGCTCGTTG 59.446 45.455 0.00 0.00 0.00 4.10
2481 2595 2.270352 ACCATTTTCCTGCTCGTTGA 57.730 45.000 0.00 0.00 0.00 3.18
2482 2596 2.582052 ACCATTTTCCTGCTCGTTGAA 58.418 42.857 0.00 0.00 0.00 2.69
2483 2597 2.293399 ACCATTTTCCTGCTCGTTGAAC 59.707 45.455 0.00 0.00 0.00 3.18
2484 2598 2.574322 CATTTTCCTGCTCGTTGAACG 58.426 47.619 12.12 12.12 44.19 3.95
2492 2606 2.049802 TCGTTGAACGAGGCGGAC 60.050 61.111 17.28 0.00 46.73 4.79
2493 2607 3.110178 CGTTGAACGAGGCGGACC 61.110 66.667 13.13 0.00 46.05 4.46
2494 2608 2.029964 GTTGAACGAGGCGGACCA 59.970 61.111 0.00 0.00 39.06 4.02
2495 2609 1.595929 GTTGAACGAGGCGGACCAA 60.596 57.895 0.00 0.00 39.06 3.67
2496 2610 0.953960 GTTGAACGAGGCGGACCAAT 60.954 55.000 0.00 0.00 39.06 3.16
2497 2611 0.609151 TTGAACGAGGCGGACCAATA 59.391 50.000 0.00 0.00 39.06 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 3.084039 CCTCAATGCAGCCTTGTTCTTA 58.916 45.455 9.91 0.00 0.00 2.10
187 188 7.412063 GCTACTCTAAGTACTCTAAGAAGTGC 58.588 42.308 0.00 1.45 32.65 4.40
201 202 3.014304 TCACCATCCGCTACTCTAAGT 57.986 47.619 0.00 0.00 0.00 2.24
516 517 6.436738 AGAGCACAGATTATTGATCCATCT 57.563 37.500 0.00 0.00 35.21 2.90
520 521 6.817641 CCTCATAGAGCACAGATTATTGATCC 59.182 42.308 0.00 0.00 35.21 3.36
527 528 2.634940 GGCCCTCATAGAGCACAGATTA 59.365 50.000 0.00 0.00 0.00 1.75
637 638 4.832248 CTGGAACTGGAACTAACATGCTA 58.168 43.478 0.00 0.00 0.00 3.49
955 959 8.463930 ACAAAGACAAGATCATTCAACCTTTA 57.536 30.769 0.00 0.00 0.00 1.85
1022 1026 1.207791 ATTCTCGCCCACCTTCTCAT 58.792 50.000 0.00 0.00 0.00 2.90
1191 1195 1.706287 GATTGCGGCCTCGAAGGTTC 61.706 60.000 0.00 0.00 37.80 3.62
1229 1233 0.040058 TGTCTGGCCCCTACGAACTA 59.960 55.000 0.00 0.00 0.00 2.24
1255 1259 1.212455 CGTGCGTAGTGTTGCAGACA 61.212 55.000 1.25 0.00 42.68 3.41
1509 1525 2.951642 CTCTCTCATGTCTCTCCACTCC 59.048 54.545 0.00 0.00 0.00 3.85
1599 1639 4.827284 AGTCCACATAACAAAGGTGAAAGG 59.173 41.667 0.00 0.00 42.55 3.11
1600 1640 6.710744 AGTAGTCCACATAACAAAGGTGAAAG 59.289 38.462 0.00 0.00 42.55 2.62
1601 1641 6.485313 CAGTAGTCCACATAACAAAGGTGAAA 59.515 38.462 0.00 0.00 42.55 2.69
1602 1642 5.995282 CAGTAGTCCACATAACAAAGGTGAA 59.005 40.000 0.00 0.00 42.55 3.18
1603 1643 5.512404 CCAGTAGTCCACATAACAAAGGTGA 60.512 44.000 0.00 0.00 42.55 4.02
1604 1644 4.695455 CCAGTAGTCCACATAACAAAGGTG 59.305 45.833 0.00 0.00 39.62 4.00
1605 1645 4.595781 TCCAGTAGTCCACATAACAAAGGT 59.404 41.667 0.00 0.00 0.00 3.50
1927 2022 6.255887 CAGAATTAAGTAGAACTTGGTAGGCG 59.744 42.308 2.59 0.00 39.11 5.52
2060 2174 8.622948 ATTTTCTAAGGTTTCAATTCGAGAGT 57.377 30.769 0.00 0.00 0.00 3.24
2063 2177 9.638300 CGATATTTTCTAAGGTTTCAATTCGAG 57.362 33.333 0.00 0.00 0.00 4.04
2064 2178 9.373603 TCGATATTTTCTAAGGTTTCAATTCGA 57.626 29.630 0.00 0.00 0.00 3.71
2065 2179 9.638300 CTCGATATTTTCTAAGGTTTCAATTCG 57.362 33.333 0.00 0.00 0.00 3.34
2068 2182 8.831550 GCTCTCGATATTTTCTAAGGTTTCAAT 58.168 33.333 0.00 0.00 0.00 2.57
2069 2183 7.822334 TGCTCTCGATATTTTCTAAGGTTTCAA 59.178 33.333 0.00 0.00 0.00 2.69
2070 2184 7.327975 TGCTCTCGATATTTTCTAAGGTTTCA 58.672 34.615 0.00 0.00 0.00 2.69
2071 2185 7.772332 TGCTCTCGATATTTTCTAAGGTTTC 57.228 36.000 0.00 0.00 0.00 2.78
2072 2186 8.561738 TTTGCTCTCGATATTTTCTAAGGTTT 57.438 30.769 0.00 0.00 0.00 3.27
2073 2187 7.824779 ACTTTGCTCTCGATATTTTCTAAGGTT 59.175 33.333 0.00 0.00 0.00 3.50
2074 2188 7.331791 ACTTTGCTCTCGATATTTTCTAAGGT 58.668 34.615 0.00 0.00 0.00 3.50
2075 2189 7.778470 ACTTTGCTCTCGATATTTTCTAAGG 57.222 36.000 0.00 0.00 0.00 2.69
2079 2193 9.092876 CTTCTTACTTTGCTCTCGATATTTTCT 57.907 33.333 0.00 0.00 0.00 2.52
2080 2194 8.331742 CCTTCTTACTTTGCTCTCGATATTTTC 58.668 37.037 0.00 0.00 0.00 2.29
2081 2195 7.824779 ACCTTCTTACTTTGCTCTCGATATTTT 59.175 33.333 0.00 0.00 0.00 1.82
2082 2196 7.278868 CACCTTCTTACTTTGCTCTCGATATTT 59.721 37.037 0.00 0.00 0.00 1.40
2083 2197 6.758886 CACCTTCTTACTTTGCTCTCGATATT 59.241 38.462 0.00 0.00 0.00 1.28
2084 2198 6.276847 CACCTTCTTACTTTGCTCTCGATAT 58.723 40.000 0.00 0.00 0.00 1.63
2085 2199 5.651530 CACCTTCTTACTTTGCTCTCGATA 58.348 41.667 0.00 0.00 0.00 2.92
2086 2200 4.499183 CACCTTCTTACTTTGCTCTCGAT 58.501 43.478 0.00 0.00 0.00 3.59
2087 2201 3.861131 GCACCTTCTTACTTTGCTCTCGA 60.861 47.826 0.00 0.00 0.00 4.04
2088 2202 2.413453 GCACCTTCTTACTTTGCTCTCG 59.587 50.000 0.00 0.00 0.00 4.04
2089 2203 3.403038 TGCACCTTCTTACTTTGCTCTC 58.597 45.455 0.00 0.00 34.18 3.20
2090 2204 3.492102 TGCACCTTCTTACTTTGCTCT 57.508 42.857 0.00 0.00 34.18 4.09
2091 2205 4.568152 TTTGCACCTTCTTACTTTGCTC 57.432 40.909 0.00 0.00 34.18 4.26
2092 2206 5.535753 ATTTTGCACCTTCTTACTTTGCT 57.464 34.783 0.00 0.00 34.18 3.91
2093 2207 6.677913 TCTATTTTGCACCTTCTTACTTTGC 58.322 36.000 0.00 0.00 0.00 3.68
2094 2208 8.352942 ACTTCTATTTTGCACCTTCTTACTTTG 58.647 33.333 0.00 0.00 0.00 2.77
2095 2209 8.465273 ACTTCTATTTTGCACCTTCTTACTTT 57.535 30.769 0.00 0.00 0.00 2.66
2096 2210 8.465273 AACTTCTATTTTGCACCTTCTTACTT 57.535 30.769 0.00 0.00 0.00 2.24
2097 2211 8.465273 AAACTTCTATTTTGCACCTTCTTACT 57.535 30.769 0.00 0.00 0.00 2.24
2098 2212 8.349983 TGAAACTTCTATTTTGCACCTTCTTAC 58.650 33.333 0.00 0.00 0.00 2.34
2099 2213 8.458573 TGAAACTTCTATTTTGCACCTTCTTA 57.541 30.769 0.00 0.00 0.00 2.10
2100 2214 7.346751 TGAAACTTCTATTTTGCACCTTCTT 57.653 32.000 0.00 0.00 0.00 2.52
2101 2215 6.959639 TGAAACTTCTATTTTGCACCTTCT 57.040 33.333 0.00 0.00 0.00 2.85
2102 2216 6.144563 GCTTGAAACTTCTATTTTGCACCTTC 59.855 38.462 0.00 0.00 0.00 3.46
2103 2217 5.985530 GCTTGAAACTTCTATTTTGCACCTT 59.014 36.000 0.00 0.00 0.00 3.50
2104 2218 5.532557 GCTTGAAACTTCTATTTTGCACCT 58.467 37.500 0.00 0.00 0.00 4.00
2105 2219 4.382754 CGCTTGAAACTTCTATTTTGCACC 59.617 41.667 0.00 0.00 0.00 5.01
2106 2220 4.143535 GCGCTTGAAACTTCTATTTTGCAC 60.144 41.667 0.00 0.00 0.00 4.57
2107 2221 3.980775 GCGCTTGAAACTTCTATTTTGCA 59.019 39.130 0.00 0.00 0.00 4.08
2108 2222 3.980775 TGCGCTTGAAACTTCTATTTTGC 59.019 39.130 9.73 0.00 0.00 3.68
2109 2223 6.470235 CCTATGCGCTTGAAACTTCTATTTTG 59.530 38.462 9.73 0.00 0.00 2.44
2110 2224 6.555315 CCTATGCGCTTGAAACTTCTATTTT 58.445 36.000 9.73 0.00 0.00 1.82
2111 2225 5.449177 GCCTATGCGCTTGAAACTTCTATTT 60.449 40.000 9.73 0.00 0.00 1.40
2112 2226 4.035675 GCCTATGCGCTTGAAACTTCTATT 59.964 41.667 9.73 0.00 0.00 1.73
2113 2227 3.561725 GCCTATGCGCTTGAAACTTCTAT 59.438 43.478 9.73 0.00 0.00 1.98
2114 2228 2.936498 GCCTATGCGCTTGAAACTTCTA 59.064 45.455 9.73 0.00 0.00 2.10
2115 2229 1.740025 GCCTATGCGCTTGAAACTTCT 59.260 47.619 9.73 0.00 0.00 2.85
2116 2230 1.468520 TGCCTATGCGCTTGAAACTTC 59.531 47.619 9.73 0.00 41.78 3.01
2117 2231 1.533625 TGCCTATGCGCTTGAAACTT 58.466 45.000 9.73 0.00 41.78 2.66
2118 2232 1.533625 TTGCCTATGCGCTTGAAACT 58.466 45.000 9.73 0.00 41.78 2.66
2119 2233 2.454055 GATTGCCTATGCGCTTGAAAC 58.546 47.619 9.73 0.00 41.78 2.78
2120 2234 1.063912 CGATTGCCTATGCGCTTGAAA 59.936 47.619 9.73 0.00 41.78 2.69
2121 2235 0.657312 CGATTGCCTATGCGCTTGAA 59.343 50.000 9.73 0.00 41.78 2.69
2122 2236 0.461870 ACGATTGCCTATGCGCTTGA 60.462 50.000 9.73 0.00 41.78 3.02
2123 2237 0.378257 AACGATTGCCTATGCGCTTG 59.622 50.000 9.73 0.00 41.78 4.01
2124 2238 1.094785 AAACGATTGCCTATGCGCTT 58.905 45.000 9.73 4.59 41.78 4.68
2125 2239 0.378257 CAAACGATTGCCTATGCGCT 59.622 50.000 9.73 0.00 41.78 5.92
2126 2240 0.098728 ACAAACGATTGCCTATGCGC 59.901 50.000 0.00 0.00 40.34 6.09
2127 2241 2.176369 CAACAAACGATTGCCTATGCG 58.824 47.619 5.20 0.00 40.34 4.73
2128 2242 1.919918 GCAACAAACGATTGCCTATGC 59.080 47.619 5.20 7.65 45.48 3.14
2135 2249 2.053627 GCTTCAGGCAACAAACGATTG 58.946 47.619 3.59 3.59 40.58 2.67
2136 2250 1.334960 CGCTTCAGGCAACAAACGATT 60.335 47.619 0.00 0.00 41.91 3.34
2137 2251 0.238289 CGCTTCAGGCAACAAACGAT 59.762 50.000 0.00 0.00 41.91 3.73
2138 2252 0.812014 TCGCTTCAGGCAACAAACGA 60.812 50.000 0.00 0.00 41.91 3.85
2139 2253 0.028770 TTCGCTTCAGGCAACAAACG 59.971 50.000 0.00 0.00 41.91 3.60
2140 2254 1.065551 ACTTCGCTTCAGGCAACAAAC 59.934 47.619 0.00 0.00 41.91 2.93
2141 2255 1.065401 CACTTCGCTTCAGGCAACAAA 59.935 47.619 0.00 0.00 41.91 2.83
2142 2256 0.662619 CACTTCGCTTCAGGCAACAA 59.337 50.000 0.00 0.00 41.91 2.83
2143 2257 0.463654 ACACTTCGCTTCAGGCAACA 60.464 50.000 0.00 0.00 41.91 3.33
2144 2258 0.040958 CACACTTCGCTTCAGGCAAC 60.041 55.000 0.00 0.00 41.91 4.17
2145 2259 0.179059 TCACACTTCGCTTCAGGCAA 60.179 50.000 0.00 0.00 41.91 4.52
2146 2260 0.179059 TTCACACTTCGCTTCAGGCA 60.179 50.000 0.00 0.00 41.91 4.75
2147 2261 0.944386 TTTCACACTTCGCTTCAGGC 59.056 50.000 0.00 0.00 37.64 4.85
2148 2262 1.532868 CCTTTCACACTTCGCTTCAGG 59.467 52.381 0.00 0.00 0.00 3.86
2149 2263 1.532868 CCCTTTCACACTTCGCTTCAG 59.467 52.381 0.00 0.00 0.00 3.02
2150 2264 1.593196 CCCTTTCACACTTCGCTTCA 58.407 50.000 0.00 0.00 0.00 3.02
2151 2265 0.875059 CCCCTTTCACACTTCGCTTC 59.125 55.000 0.00 0.00 0.00 3.86
2152 2266 0.182775 ACCCCTTTCACACTTCGCTT 59.817 50.000 0.00 0.00 0.00 4.68
2153 2267 0.182775 AACCCCTTTCACACTTCGCT 59.817 50.000 0.00 0.00 0.00 4.93
2154 2268 0.591659 GAACCCCTTTCACACTTCGC 59.408 55.000 0.00 0.00 33.94 4.70
2155 2269 1.873591 CTGAACCCCTTTCACACTTCG 59.126 52.381 0.00 0.00 39.45 3.79
2156 2270 3.142174 CTCTGAACCCCTTTCACACTTC 58.858 50.000 0.00 0.00 39.45 3.01
2157 2271 2.749800 GCTCTGAACCCCTTTCACACTT 60.750 50.000 0.00 0.00 39.45 3.16
2158 2272 1.202818 GCTCTGAACCCCTTTCACACT 60.203 52.381 0.00 0.00 39.45 3.55
2159 2273 1.239347 GCTCTGAACCCCTTTCACAC 58.761 55.000 0.00 0.00 39.45 3.82
2160 2274 0.843309 TGCTCTGAACCCCTTTCACA 59.157 50.000 0.00 0.00 39.45 3.58
2161 2275 1.981256 TTGCTCTGAACCCCTTTCAC 58.019 50.000 0.00 0.00 39.45 3.18
2162 2276 2.517959 CATTGCTCTGAACCCCTTTCA 58.482 47.619 0.00 0.00 42.26 2.69
2163 2277 1.821136 CCATTGCTCTGAACCCCTTTC 59.179 52.381 0.00 0.00 34.41 2.62
2164 2278 1.550869 CCCATTGCTCTGAACCCCTTT 60.551 52.381 0.00 0.00 0.00 3.11
2165 2279 0.040204 CCCATTGCTCTGAACCCCTT 59.960 55.000 0.00 0.00 0.00 3.95
2166 2280 0.846427 TCCCATTGCTCTGAACCCCT 60.846 55.000 0.00 0.00 0.00 4.79
2167 2281 0.039618 TTCCCATTGCTCTGAACCCC 59.960 55.000 0.00 0.00 0.00 4.95
2168 2282 2.149973 ATTCCCATTGCTCTGAACCC 57.850 50.000 0.00 0.00 0.00 4.11
2169 2283 4.273318 ACTTATTCCCATTGCTCTGAACC 58.727 43.478 0.00 0.00 0.00 3.62
2170 2284 7.420800 CAATACTTATTCCCATTGCTCTGAAC 58.579 38.462 0.00 0.00 0.00 3.18
2171 2285 6.039717 GCAATACTTATTCCCATTGCTCTGAA 59.960 38.462 10.11 0.00 46.15 3.02
2172 2286 5.532406 GCAATACTTATTCCCATTGCTCTGA 59.468 40.000 10.11 0.00 46.15 3.27
2173 2287 5.561532 CGCAATACTTATTCCCATTGCTCTG 60.562 44.000 14.15 0.00 47.00 3.35
2174 2288 4.516698 CGCAATACTTATTCCCATTGCTCT 59.483 41.667 14.15 0.00 47.00 4.09
2175 2289 4.275936 ACGCAATACTTATTCCCATTGCTC 59.724 41.667 14.15 0.00 47.00 4.26
2176 2290 4.207165 ACGCAATACTTATTCCCATTGCT 58.793 39.130 14.15 1.94 47.00 3.91
2177 2291 4.275936 AGACGCAATACTTATTCCCATTGC 59.724 41.667 7.83 7.83 46.17 3.56
2178 2292 5.527214 TCAGACGCAATACTTATTCCCATTG 59.473 40.000 0.00 0.00 0.00 2.82
2179 2293 5.680619 TCAGACGCAATACTTATTCCCATT 58.319 37.500 0.00 0.00 0.00 3.16
2180 2294 5.290493 TCAGACGCAATACTTATTCCCAT 57.710 39.130 0.00 0.00 0.00 4.00
2181 2295 4.746535 TCAGACGCAATACTTATTCCCA 57.253 40.909 0.00 0.00 0.00 4.37
2182 2296 5.638234 GGTATCAGACGCAATACTTATTCCC 59.362 44.000 0.00 0.00 0.00 3.97
2183 2297 6.220930 TGGTATCAGACGCAATACTTATTCC 58.779 40.000 0.00 0.00 0.00 3.01
2184 2298 7.145985 TCTGGTATCAGACGCAATACTTATTC 58.854 38.462 0.14 0.00 44.39 1.75
2185 2299 7.050970 TCTGGTATCAGACGCAATACTTATT 57.949 36.000 0.14 0.00 44.39 1.40
2186 2300 6.650427 TCTGGTATCAGACGCAATACTTAT 57.350 37.500 0.14 0.00 44.39 1.73
2196 2310 7.282901 ATGAGATCATCTATCTGGTATCAGACG 59.717 40.741 8.14 2.73 45.35 4.18
2197 2311 8.523915 ATGAGATCATCTATCTGGTATCAGAC 57.476 38.462 8.14 0.00 45.35 3.51
2212 2326 2.869636 GCCACCTTCCGATGAGATCATC 60.870 54.545 11.98 11.98 46.93 2.92
2213 2327 1.071385 GCCACCTTCCGATGAGATCAT 59.929 52.381 0.00 0.00 39.70 2.45
2214 2328 0.465705 GCCACCTTCCGATGAGATCA 59.534 55.000 0.00 0.00 0.00 2.92
2215 2329 0.755686 AGCCACCTTCCGATGAGATC 59.244 55.000 0.00 0.00 0.00 2.75
2216 2330 0.755686 GAGCCACCTTCCGATGAGAT 59.244 55.000 0.00 0.00 0.00 2.75
2217 2331 1.667154 CGAGCCACCTTCCGATGAGA 61.667 60.000 0.00 0.00 0.00 3.27
2218 2332 1.227089 CGAGCCACCTTCCGATGAG 60.227 63.158 0.00 0.00 0.00 2.90
2219 2333 1.982395 ACGAGCCACCTTCCGATGA 60.982 57.895 0.00 0.00 0.00 2.92
2220 2334 1.811266 CACGAGCCACCTTCCGATG 60.811 63.158 0.00 0.00 0.00 3.84
2221 2335 1.541310 TTCACGAGCCACCTTCCGAT 61.541 55.000 0.00 0.00 0.00 4.18
2222 2336 1.541310 ATTCACGAGCCACCTTCCGA 61.541 55.000 0.00 0.00 0.00 4.55
2223 2337 0.673644 AATTCACGAGCCACCTTCCG 60.674 55.000 0.00 0.00 0.00 4.30
2224 2338 2.007608 GTAATTCACGAGCCACCTTCC 58.992 52.381 0.00 0.00 0.00 3.46
2225 2339 2.415512 GTGTAATTCACGAGCCACCTTC 59.584 50.000 0.00 0.00 37.31 3.46
2226 2340 2.423577 GTGTAATTCACGAGCCACCTT 58.576 47.619 0.00 0.00 37.31 3.50
2227 2341 2.094762 GTGTAATTCACGAGCCACCT 57.905 50.000 0.00 0.00 37.31 4.00
2236 2350 1.463444 GTGGCCTCGTGTGTAATTCAC 59.537 52.381 3.32 0.00 46.31 3.18
2237 2351 1.070914 TGTGGCCTCGTGTGTAATTCA 59.929 47.619 3.32 0.00 0.00 2.57
2238 2352 1.463444 GTGTGGCCTCGTGTGTAATTC 59.537 52.381 3.32 0.00 0.00 2.17
2239 2353 1.519408 GTGTGGCCTCGTGTGTAATT 58.481 50.000 3.32 0.00 0.00 1.40
2240 2354 0.669318 CGTGTGGCCTCGTGTGTAAT 60.669 55.000 3.32 0.00 0.00 1.89
2241 2355 1.300311 CGTGTGGCCTCGTGTGTAA 60.300 57.895 3.32 0.00 0.00 2.41
2242 2356 2.337170 CGTGTGGCCTCGTGTGTA 59.663 61.111 3.32 0.00 0.00 2.90
2249 2363 2.292794 TATTCCTCGCGTGTGGCCTC 62.293 60.000 12.18 0.00 38.94 4.70
2250 2364 1.895020 TTATTCCTCGCGTGTGGCCT 61.895 55.000 12.18 4.60 38.94 5.19
2251 2365 1.448893 TTATTCCTCGCGTGTGGCC 60.449 57.895 12.18 0.00 38.94 5.36
2252 2366 0.739813 AGTTATTCCTCGCGTGTGGC 60.740 55.000 12.18 0.00 38.69 5.01
2253 2367 1.722011 AAGTTATTCCTCGCGTGTGG 58.278 50.000 10.81 10.81 0.00 4.17
2254 2368 2.159707 CCAAAGTTATTCCTCGCGTGTG 60.160 50.000 5.77 0.00 0.00 3.82
2255 2369 2.073816 CCAAAGTTATTCCTCGCGTGT 58.926 47.619 5.77 0.00 0.00 4.49
2256 2370 1.396996 CCCAAAGTTATTCCTCGCGTG 59.603 52.381 5.77 2.75 0.00 5.34
2257 2371 1.276989 TCCCAAAGTTATTCCTCGCGT 59.723 47.619 5.77 0.00 0.00 6.01
2258 2372 2.018542 TCCCAAAGTTATTCCTCGCG 57.981 50.000 0.00 0.00 0.00 5.87
2259 2373 3.078837 TGTTCCCAAAGTTATTCCTCGC 58.921 45.455 0.00 0.00 0.00 5.03
2260 2374 3.689649 CCTGTTCCCAAAGTTATTCCTCG 59.310 47.826 0.00 0.00 0.00 4.63
2261 2375 4.918588 TCCTGTTCCCAAAGTTATTCCTC 58.081 43.478 0.00 0.00 0.00 3.71
2262 2376 4.263949 CCTCCTGTTCCCAAAGTTATTCCT 60.264 45.833 0.00 0.00 0.00 3.36
2263 2377 4.017126 CCTCCTGTTCCCAAAGTTATTCC 58.983 47.826 0.00 0.00 0.00 3.01
2264 2378 4.459337 CACCTCCTGTTCCCAAAGTTATTC 59.541 45.833 0.00 0.00 0.00 1.75
2265 2379 4.141018 ACACCTCCTGTTCCCAAAGTTATT 60.141 41.667 0.00 0.00 0.00 1.40
2266 2380 3.397955 ACACCTCCTGTTCCCAAAGTTAT 59.602 43.478 0.00 0.00 0.00 1.89
2267 2381 2.781174 ACACCTCCTGTTCCCAAAGTTA 59.219 45.455 0.00 0.00 0.00 2.24
2268 2382 1.569072 ACACCTCCTGTTCCCAAAGTT 59.431 47.619 0.00 0.00 0.00 2.66
2269 2383 1.222567 ACACCTCCTGTTCCCAAAGT 58.777 50.000 0.00 0.00 0.00 2.66
2270 2384 2.105821 TGTACACCTCCTGTTCCCAAAG 59.894 50.000 0.00 0.00 33.91 2.77
2271 2385 2.105821 CTGTACACCTCCTGTTCCCAAA 59.894 50.000 0.00 0.00 33.91 3.28
2272 2386 1.697432 CTGTACACCTCCTGTTCCCAA 59.303 52.381 0.00 0.00 33.91 4.12
2273 2387 1.348064 CTGTACACCTCCTGTTCCCA 58.652 55.000 0.00 0.00 33.91 4.37
2274 2388 0.613777 CCTGTACACCTCCTGTTCCC 59.386 60.000 0.00 0.00 33.91 3.97
2275 2389 1.550976 CTCCTGTACACCTCCTGTTCC 59.449 57.143 0.00 0.00 33.91 3.62
2276 2390 2.494073 CTCTCCTGTACACCTCCTGTTC 59.506 54.545 0.00 0.00 33.91 3.18
2277 2391 2.158295 ACTCTCCTGTACACCTCCTGTT 60.158 50.000 0.00 0.00 33.91 3.16
2278 2392 1.429687 ACTCTCCTGTACACCTCCTGT 59.570 52.381 0.00 0.00 36.82 4.00
2279 2393 2.096248 GACTCTCCTGTACACCTCCTG 58.904 57.143 0.00 0.00 0.00 3.86
2280 2394 1.711375 TGACTCTCCTGTACACCTCCT 59.289 52.381 0.00 0.00 0.00 3.69
2281 2395 2.096248 CTGACTCTCCTGTACACCTCC 58.904 57.143 0.00 0.00 0.00 4.30
2282 2396 2.096248 CCTGACTCTCCTGTACACCTC 58.904 57.143 0.00 0.00 0.00 3.85
2283 2397 1.429687 ACCTGACTCTCCTGTACACCT 59.570 52.381 0.00 0.00 0.00 4.00
2284 2398 1.926108 ACCTGACTCTCCTGTACACC 58.074 55.000 0.00 0.00 0.00 4.16
2285 2399 3.612004 CGAAACCTGACTCTCCTGTACAC 60.612 52.174 0.00 0.00 0.00 2.90
2286 2400 2.557056 CGAAACCTGACTCTCCTGTACA 59.443 50.000 0.00 0.00 0.00 2.90
2287 2401 2.818432 TCGAAACCTGACTCTCCTGTAC 59.182 50.000 0.00 0.00 0.00 2.90
2288 2402 3.150458 TCGAAACCTGACTCTCCTGTA 57.850 47.619 0.00 0.00 0.00 2.74
2289 2403 1.996798 TCGAAACCTGACTCTCCTGT 58.003 50.000 0.00 0.00 0.00 4.00
2290 2404 2.757868 AGATCGAAACCTGACTCTCCTG 59.242 50.000 0.00 0.00 0.00 3.86
2291 2405 3.094484 AGATCGAAACCTGACTCTCCT 57.906 47.619 0.00 0.00 0.00 3.69
2292 2406 3.056465 ACAAGATCGAAACCTGACTCTCC 60.056 47.826 0.00 0.00 0.00 3.71
2293 2407 3.923461 CACAAGATCGAAACCTGACTCTC 59.077 47.826 0.00 0.00 0.00 3.20
2294 2408 3.574396 TCACAAGATCGAAACCTGACTCT 59.426 43.478 0.00 0.00 0.00 3.24
2295 2409 3.914312 TCACAAGATCGAAACCTGACTC 58.086 45.455 0.00 0.00 0.00 3.36
2296 2410 4.336889 TTCACAAGATCGAAACCTGACT 57.663 40.909 0.00 0.00 0.00 3.41
2297 2411 4.773510 GTTTCACAAGATCGAAACCTGAC 58.226 43.478 10.97 0.00 43.29 3.51
2303 2417 3.563808 CCCACAGTTTCACAAGATCGAAA 59.436 43.478 0.00 0.00 0.00 3.46
2304 2418 3.138304 CCCACAGTTTCACAAGATCGAA 58.862 45.455 0.00 0.00 0.00 3.71
2305 2419 2.104111 ACCCACAGTTTCACAAGATCGA 59.896 45.455 0.00 0.00 0.00 3.59
2306 2420 2.494059 ACCCACAGTTTCACAAGATCG 58.506 47.619 0.00 0.00 0.00 3.69
2307 2421 5.106157 CCATAACCCACAGTTTCACAAGATC 60.106 44.000 0.00 0.00 40.05 2.75
2308 2422 4.766891 CCATAACCCACAGTTTCACAAGAT 59.233 41.667 0.00 0.00 40.05 2.40
2309 2423 4.141287 CCATAACCCACAGTTTCACAAGA 58.859 43.478 0.00 0.00 40.05 3.02
2310 2424 3.255642 CCCATAACCCACAGTTTCACAAG 59.744 47.826 0.00 0.00 40.05 3.16
2311 2425 3.226777 CCCATAACCCACAGTTTCACAA 58.773 45.455 0.00 0.00 40.05 3.33
2312 2426 2.870175 CCCATAACCCACAGTTTCACA 58.130 47.619 0.00 0.00 40.05 3.58
2313 2427 1.544246 GCCCATAACCCACAGTTTCAC 59.456 52.381 0.00 0.00 40.05 3.18
2314 2428 1.549037 GGCCCATAACCCACAGTTTCA 60.549 52.381 0.00 0.00 40.05 2.69
2315 2429 1.182667 GGCCCATAACCCACAGTTTC 58.817 55.000 0.00 0.00 40.05 2.78
2316 2430 3.374318 GGCCCATAACCCACAGTTT 57.626 52.632 0.00 0.00 40.05 2.66
2337 2451 2.524306 TCCTGCTTTTAACCCACATGG 58.476 47.619 0.00 0.00 41.37 3.66
2338 2452 3.056607 CCTTCCTGCTTTTAACCCACATG 60.057 47.826 0.00 0.00 0.00 3.21
2339 2453 3.165071 CCTTCCTGCTTTTAACCCACAT 58.835 45.455 0.00 0.00 0.00 3.21
2340 2454 2.593026 CCTTCCTGCTTTTAACCCACA 58.407 47.619 0.00 0.00 0.00 4.17
2341 2455 1.893137 CCCTTCCTGCTTTTAACCCAC 59.107 52.381 0.00 0.00 0.00 4.61
2342 2456 1.825641 GCCCTTCCTGCTTTTAACCCA 60.826 52.381 0.00 0.00 0.00 4.51
2343 2457 0.895530 GCCCTTCCTGCTTTTAACCC 59.104 55.000 0.00 0.00 0.00 4.11
2344 2458 0.526211 CGCCCTTCCTGCTTTTAACC 59.474 55.000 0.00 0.00 0.00 2.85
2345 2459 0.526211 CCGCCCTTCCTGCTTTTAAC 59.474 55.000 0.00 0.00 0.00 2.01
2346 2460 0.111639 ACCGCCCTTCCTGCTTTTAA 59.888 50.000 0.00 0.00 0.00 1.52
2347 2461 0.608035 CACCGCCCTTCCTGCTTTTA 60.608 55.000 0.00 0.00 0.00 1.52
2348 2462 1.903404 CACCGCCCTTCCTGCTTTT 60.903 57.895 0.00 0.00 0.00 2.27
2349 2463 2.282462 CACCGCCCTTCCTGCTTT 60.282 61.111 0.00 0.00 0.00 3.51
2350 2464 3.249189 TCACCGCCCTTCCTGCTT 61.249 61.111 0.00 0.00 0.00 3.91
2351 2465 4.021925 GTCACCGCCCTTCCTGCT 62.022 66.667 0.00 0.00 0.00 4.24
2352 2466 3.628646 ATGTCACCGCCCTTCCTGC 62.629 63.158 0.00 0.00 0.00 4.85
2353 2467 1.450312 GATGTCACCGCCCTTCCTG 60.450 63.158 0.00 0.00 0.00 3.86
2354 2468 1.201429 AAGATGTCACCGCCCTTCCT 61.201 55.000 0.00 0.00 0.00 3.36
2355 2469 1.026718 CAAGATGTCACCGCCCTTCC 61.027 60.000 0.00 0.00 0.00 3.46
2356 2470 1.648467 GCAAGATGTCACCGCCCTTC 61.648 60.000 0.00 0.00 0.00 3.46
2357 2471 1.675641 GCAAGATGTCACCGCCCTT 60.676 57.895 0.00 0.00 0.00 3.95
2358 2472 2.045926 GCAAGATGTCACCGCCCT 60.046 61.111 0.00 0.00 0.00 5.19
2359 2473 1.750399 ATGCAAGATGTCACCGCCC 60.750 57.895 0.00 0.00 0.00 6.13
2360 2474 1.430632 CATGCAAGATGTCACCGCC 59.569 57.895 0.00 0.00 0.00 6.13
2361 2475 1.308069 ACCATGCAAGATGTCACCGC 61.308 55.000 0.00 0.00 0.00 5.68
2362 2476 0.729116 GACCATGCAAGATGTCACCG 59.271 55.000 0.00 0.00 0.00 4.94
2363 2477 1.825090 TGACCATGCAAGATGTCACC 58.175 50.000 0.00 0.00 0.00 4.02
2364 2478 3.011818 TCATGACCATGCAAGATGTCAC 58.988 45.455 11.54 0.00 38.65 3.67
2365 2479 3.353370 TCATGACCATGCAAGATGTCA 57.647 42.857 11.66 11.66 38.65 3.58
2366 2480 4.083431 GCTATCATGACCATGCAAGATGTC 60.083 45.833 0.00 0.00 38.65 3.06
2367 2481 3.819337 GCTATCATGACCATGCAAGATGT 59.181 43.478 0.00 0.00 38.65 3.06
2368 2482 3.818773 TGCTATCATGACCATGCAAGATG 59.181 43.478 0.00 0.00 38.65 2.90
2369 2483 4.094830 TGCTATCATGACCATGCAAGAT 57.905 40.909 0.00 0.00 38.65 2.40
2370 2484 3.564053 TGCTATCATGACCATGCAAGA 57.436 42.857 0.00 0.00 38.65 3.02
2371 2485 4.224715 CTTGCTATCATGACCATGCAAG 57.775 45.455 25.21 25.21 46.84 4.01
2372 2486 2.953648 CCTTGCTATCATGACCATGCAA 59.046 45.455 18.69 18.69 38.65 4.08
2373 2487 2.578786 CCTTGCTATCATGACCATGCA 58.421 47.619 0.00 3.54 38.65 3.96
2374 2488 1.268899 GCCTTGCTATCATGACCATGC 59.731 52.381 0.00 0.65 38.65 4.06
2375 2489 2.578786 TGCCTTGCTATCATGACCATG 58.421 47.619 0.00 3.70 40.09 3.66
2376 2490 3.520691 ATGCCTTGCTATCATGACCAT 57.479 42.857 0.00 0.00 0.00 3.55
2377 2491 4.041938 TGATATGCCTTGCTATCATGACCA 59.958 41.667 0.00 0.00 31.17 4.02
2378 2492 4.582869 TGATATGCCTTGCTATCATGACC 58.417 43.478 0.00 0.00 31.17 4.02
2379 2493 5.485620 TCTGATATGCCTTGCTATCATGAC 58.514 41.667 0.00 0.00 34.69 3.06
2380 2494 5.338137 CCTCTGATATGCCTTGCTATCATGA 60.338 44.000 0.00 0.00 34.69 3.07
2381 2495 4.876679 CCTCTGATATGCCTTGCTATCATG 59.123 45.833 7.94 0.00 34.69 3.07
2382 2496 4.080469 CCCTCTGATATGCCTTGCTATCAT 60.080 45.833 7.94 0.00 34.69 2.45
2383 2497 3.262660 CCCTCTGATATGCCTTGCTATCA 59.737 47.826 0.00 0.00 34.19 2.15
2384 2498 3.262915 ACCCTCTGATATGCCTTGCTATC 59.737 47.826 0.00 0.00 0.00 2.08
2385 2499 3.254960 ACCCTCTGATATGCCTTGCTAT 58.745 45.455 0.00 0.00 0.00 2.97
2386 2500 2.694397 ACCCTCTGATATGCCTTGCTA 58.306 47.619 0.00 0.00 0.00 3.49
2387 2501 1.516110 ACCCTCTGATATGCCTTGCT 58.484 50.000 0.00 0.00 0.00 3.91
2388 2502 2.873649 GCTACCCTCTGATATGCCTTGC 60.874 54.545 0.00 0.00 0.00 4.01
2389 2503 2.289945 GGCTACCCTCTGATATGCCTTG 60.290 54.545 0.00 0.00 36.32 3.61
2390 2504 1.981495 GGCTACCCTCTGATATGCCTT 59.019 52.381 0.00 0.00 36.32 4.35
2391 2505 1.150986 AGGCTACCCTCTGATATGCCT 59.849 52.381 0.00 0.00 43.61 4.75
2392 2506 1.277557 CAGGCTACCCTCTGATATGCC 59.722 57.143 0.00 0.00 40.33 4.40
2393 2507 1.974236 ACAGGCTACCCTCTGATATGC 59.026 52.381 0.00 0.00 40.33 3.14
2394 2508 3.234353 TGACAGGCTACCCTCTGATATG 58.766 50.000 0.00 0.00 40.33 1.78
2395 2509 3.116939 ACTGACAGGCTACCCTCTGATAT 60.117 47.826 7.51 0.00 40.33 1.63
2396 2510 2.245028 ACTGACAGGCTACCCTCTGATA 59.755 50.000 7.51 0.00 40.33 2.15
2397 2511 1.007721 ACTGACAGGCTACCCTCTGAT 59.992 52.381 7.51 0.00 40.33 2.90
2398 2512 0.409876 ACTGACAGGCTACCCTCTGA 59.590 55.000 7.51 0.00 40.33 3.27
2399 2513 1.270907 AACTGACAGGCTACCCTCTG 58.729 55.000 7.51 0.00 40.33 3.35
2400 2514 2.921834 TAACTGACAGGCTACCCTCT 57.078 50.000 7.51 0.00 40.33 3.69
2401 2515 2.766828 ACATAACTGACAGGCTACCCTC 59.233 50.000 7.51 0.00 40.33 4.30
2402 2516 2.766828 GACATAACTGACAGGCTACCCT 59.233 50.000 7.51 0.00 44.25 4.34
2403 2517 2.481449 CGACATAACTGACAGGCTACCC 60.481 54.545 7.51 0.00 0.00 3.69
2404 2518 2.481449 CCGACATAACTGACAGGCTACC 60.481 54.545 7.51 0.00 0.00 3.18
2405 2519 2.810650 CCGACATAACTGACAGGCTAC 58.189 52.381 7.51 0.00 0.00 3.58
2406 2520 1.136305 GCCGACATAACTGACAGGCTA 59.864 52.381 7.51 0.00 35.59 3.93
2407 2521 0.108138 GCCGACATAACTGACAGGCT 60.108 55.000 7.51 0.00 35.59 4.58
2408 2522 0.391130 TGCCGACATAACTGACAGGC 60.391 55.000 7.51 0.00 37.30 4.85
2409 2523 1.732259 GTTGCCGACATAACTGACAGG 59.268 52.381 7.51 0.00 0.00 4.00
2410 2524 1.732259 GGTTGCCGACATAACTGACAG 59.268 52.381 0.00 0.00 0.00 3.51
2411 2525 1.070914 TGGTTGCCGACATAACTGACA 59.929 47.619 0.00 0.00 0.00 3.58
2412 2526 1.463444 GTGGTTGCCGACATAACTGAC 59.537 52.381 0.00 0.00 0.00 3.51
2413 2527 1.070914 TGTGGTTGCCGACATAACTGA 59.929 47.619 0.00 0.00 0.00 3.41
2414 2528 1.518325 TGTGGTTGCCGACATAACTG 58.482 50.000 0.00 0.00 0.00 3.16
2415 2529 2.356135 GATGTGGTTGCCGACATAACT 58.644 47.619 0.00 0.00 32.85 2.24
2416 2530 1.062002 CGATGTGGTTGCCGACATAAC 59.938 52.381 0.00 0.00 32.85 1.89
2417 2531 1.364721 CGATGTGGTTGCCGACATAA 58.635 50.000 0.00 0.00 32.85 1.90
2418 2532 0.461163 CCGATGTGGTTGCCGACATA 60.461 55.000 0.00 0.00 32.85 2.29
2419 2533 1.745115 CCGATGTGGTTGCCGACAT 60.745 57.895 0.00 0.00 35.46 3.06
2420 2534 2.358125 CCGATGTGGTTGCCGACA 60.358 61.111 0.00 0.00 0.00 4.35
2429 2543 1.451387 GCCCTTGGTACCGATGTGG 60.451 63.158 7.57 7.69 46.41 4.17
2430 2544 1.813753 CGCCCTTGGTACCGATGTG 60.814 63.158 7.57 2.82 0.00 3.21
2431 2545 1.956629 CTCGCCCTTGGTACCGATGT 61.957 60.000 7.57 0.00 0.00 3.06
2432 2546 1.227263 CTCGCCCTTGGTACCGATG 60.227 63.158 7.57 2.06 0.00 3.84
2433 2547 2.432300 CCTCGCCCTTGGTACCGAT 61.432 63.158 7.57 0.00 0.00 4.18
2434 2548 3.072468 CCTCGCCCTTGGTACCGA 61.072 66.667 7.57 4.16 0.00 4.69
2435 2549 4.157120 CCCTCGCCCTTGGTACCG 62.157 72.222 7.57 0.00 0.00 4.02
2436 2550 2.686106 TCCCTCGCCCTTGGTACC 60.686 66.667 4.43 4.43 0.00 3.34
2437 2551 2.582978 GTCCCTCGCCCTTGGTAC 59.417 66.667 0.00 0.00 0.00 3.34
2438 2552 3.072468 CGTCCCTCGCCCTTGGTA 61.072 66.667 0.00 0.00 0.00 3.25
2440 2554 3.665675 CTTCGTCCCTCGCCCTTGG 62.666 68.421 0.00 0.00 39.67 3.61
2441 2555 2.125512 CTTCGTCCCTCGCCCTTG 60.126 66.667 0.00 0.00 39.67 3.61
2442 2556 2.283676 TCTTCGTCCCTCGCCCTT 60.284 61.111 0.00 0.00 39.67 3.95
2443 2557 2.756283 CTCTTCGTCCCTCGCCCT 60.756 66.667 0.00 0.00 39.67 5.19
2444 2558 2.348888 TTCTCTTCGTCCCTCGCCC 61.349 63.158 0.00 0.00 39.67 6.13
2445 2559 1.153804 GTTCTCTTCGTCCCTCGCC 60.154 63.158 0.00 0.00 39.67 5.54
2446 2560 1.153804 GGTTCTCTTCGTCCCTCGC 60.154 63.158 0.00 0.00 39.67 5.03
2447 2561 0.818296 ATGGTTCTCTTCGTCCCTCG 59.182 55.000 0.00 0.00 41.41 4.63
2448 2562 3.336138 AAATGGTTCTCTTCGTCCCTC 57.664 47.619 0.00 0.00 0.00 4.30
2449 2563 3.559384 GGAAAATGGTTCTCTTCGTCCCT 60.559 47.826 0.00 0.00 0.00 4.20
2450 2564 2.747989 GGAAAATGGTTCTCTTCGTCCC 59.252 50.000 0.00 0.00 0.00 4.46
2451 2565 3.437049 CAGGAAAATGGTTCTCTTCGTCC 59.563 47.826 0.00 0.00 0.00 4.79
2452 2566 3.120165 GCAGGAAAATGGTTCTCTTCGTC 60.120 47.826 0.00 0.00 0.00 4.20
2453 2567 2.814336 GCAGGAAAATGGTTCTCTTCGT 59.186 45.455 0.00 0.00 0.00 3.85
2454 2568 3.077359 AGCAGGAAAATGGTTCTCTTCG 58.923 45.455 0.00 0.00 0.00 3.79
2455 2569 3.126000 CGAGCAGGAAAATGGTTCTCTTC 59.874 47.826 0.00 0.00 0.00 2.87
2456 2570 3.077359 CGAGCAGGAAAATGGTTCTCTT 58.923 45.455 0.00 0.00 0.00 2.85
2457 2571 2.039084 ACGAGCAGGAAAATGGTTCTCT 59.961 45.455 0.00 0.00 0.00 3.10
2458 2572 2.427506 ACGAGCAGGAAAATGGTTCTC 58.572 47.619 0.00 0.00 0.00 2.87
2459 2573 2.554032 CAACGAGCAGGAAAATGGTTCT 59.446 45.455 0.00 0.00 0.00 3.01
2460 2574 2.552315 TCAACGAGCAGGAAAATGGTTC 59.448 45.455 0.00 0.00 0.00 3.62
2461 2575 2.582052 TCAACGAGCAGGAAAATGGTT 58.418 42.857 0.00 0.00 0.00 3.67
2462 2576 2.270352 TCAACGAGCAGGAAAATGGT 57.730 45.000 0.00 0.00 0.00 3.55
2463 2577 2.665519 CGTTCAACGAGCAGGAAAATGG 60.666 50.000 3.01 0.00 46.05 3.16
2464 2578 2.223144 TCGTTCAACGAGCAGGAAAATG 59.777 45.455 9.01 0.00 46.73 2.32
2465 2579 2.489971 TCGTTCAACGAGCAGGAAAAT 58.510 42.857 9.01 0.00 46.73 1.82
2466 2580 1.942677 TCGTTCAACGAGCAGGAAAA 58.057 45.000 9.01 0.00 46.73 2.29
2467 2581 3.671262 TCGTTCAACGAGCAGGAAA 57.329 47.368 9.01 0.00 46.73 3.13
2476 2590 3.110178 GGTCCGCCTCGTTCAACG 61.110 66.667 2.64 2.64 44.19 4.10
2477 2591 0.953960 ATTGGTCCGCCTCGTTCAAC 60.954 55.000 0.00 0.00 35.27 3.18
2478 2592 0.609151 TATTGGTCCGCCTCGTTCAA 59.391 50.000 0.00 0.00 35.27 2.69
2479 2593 2.278849 TATTGGTCCGCCTCGTTCA 58.721 52.632 0.00 0.00 35.27 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.