Multiple sequence alignment - TraesCS2D01G398600
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2D01G398600 | chr2D | 100.000 | 7278 | 0 | 0 | 1 | 7278 | 511687028 | 511694305 | 0.000000e+00 | 13441.0 |
1 | TraesCS2D01G398600 | chr2B | 90.340 | 2443 | 134 | 32 | 4000 | 6399 | 600742950 | 600745333 | 0.000000e+00 | 3110.0 |
2 | TraesCS2D01G398600 | chr2B | 92.218 | 2223 | 109 | 14 | 872 | 3051 | 600739925 | 600742126 | 0.000000e+00 | 3088.0 |
3 | TraesCS2D01G398600 | chr2B | 94.549 | 899 | 21 | 10 | 1 | 875 | 34583572 | 34584466 | 0.000000e+00 | 1363.0 |
4 | TraesCS2D01G398600 | chr2B | 87.032 | 802 | 59 | 15 | 3189 | 3986 | 600742211 | 600742971 | 0.000000e+00 | 863.0 |
5 | TraesCS2D01G398600 | chr2B | 84.749 | 918 | 79 | 23 | 6399 | 7278 | 600745361 | 600746255 | 0.000000e+00 | 863.0 |
6 | TraesCS2D01G398600 | chr2B | 87.461 | 646 | 60 | 19 | 5 | 646 | 79359742 | 79360370 | 0.000000e+00 | 725.0 |
7 | TraesCS2D01G398600 | chr2B | 86.777 | 121 | 11 | 4 | 5184 | 5303 | 600744434 | 600744550 | 5.930000e-26 | 130.0 |
8 | TraesCS2D01G398600 | chr2A | 89.872 | 2271 | 140 | 40 | 872 | 3069 | 654907158 | 654909411 | 0.000000e+00 | 2837.0 |
9 | TraesCS2D01G398600 | chr2A | 92.918 | 1638 | 74 | 22 | 4009 | 5630 | 654910457 | 654912068 | 0.000000e+00 | 2344.0 |
10 | TraesCS2D01G398600 | chr2A | 89.678 | 746 | 46 | 13 | 3109 | 3833 | 654909507 | 654910242 | 0.000000e+00 | 922.0 |
11 | TraesCS2D01G398600 | chr2A | 89.110 | 753 | 28 | 21 | 5671 | 6399 | 654912152 | 654912874 | 0.000000e+00 | 887.0 |
12 | TraesCS2D01G398600 | chr2A | 85.567 | 485 | 28 | 13 | 6399 | 6869 | 654912907 | 654913363 | 3.070000e-128 | 470.0 |
13 | TraesCS2D01G398600 | chr2A | 85.882 | 340 | 31 | 12 | 6950 | 7277 | 654913361 | 654913695 | 5.400000e-91 | 346.0 |
14 | TraesCS2D01G398600 | chr2A | 95.455 | 132 | 5 | 1 | 3831 | 3961 | 654910321 | 654910452 | 7.400000e-50 | 209.0 |
15 | TraesCS2D01G398600 | chr2A | 90.164 | 122 | 8 | 4 | 5184 | 5303 | 654911940 | 654912059 | 9.780000e-34 | 156.0 |
16 | TraesCS2D01G398600 | chr2A | 86.957 | 92 | 7 | 1 | 6191 | 6277 | 778801318 | 778801409 | 1.670000e-16 | 99.0 |
17 | TraesCS2D01G398600 | chr6D | 94.260 | 906 | 23 | 16 | 1 | 881 | 129160046 | 129159145 | 0.000000e+00 | 1358.0 |
18 | TraesCS2D01G398600 | chr6D | 83.824 | 136 | 21 | 1 | 1555 | 1689 | 335068120 | 335067985 | 2.130000e-25 | 128.0 |
19 | TraesCS2D01G398600 | chr6D | 87.671 | 73 | 4 | 4 | 7012 | 7082 | 42113055 | 42112986 | 6.050000e-11 | 80.5 |
20 | TraesCS2D01G398600 | chr6D | 91.304 | 46 | 2 | 1 | 6399 | 6442 | 335062782 | 335062737 | 2.190000e-05 | 62.1 |
21 | TraesCS2D01G398600 | chr3D | 93.430 | 898 | 34 | 10 | 1 | 876 | 562521981 | 562522875 | 0.000000e+00 | 1308.0 |
22 | TraesCS2D01G398600 | chr3D | 73.415 | 410 | 68 | 26 | 6850 | 7244 | 50884537 | 50884920 | 1.660000e-21 | 115.0 |
23 | TraesCS2D01G398600 | chr4D | 97.001 | 667 | 18 | 2 | 1 | 667 | 464367796 | 464368460 | 0.000000e+00 | 1120.0 |
24 | TraesCS2D01G398600 | chr4D | 88.351 | 661 | 59 | 16 | 2 | 655 | 393642862 | 393642213 | 0.000000e+00 | 778.0 |
25 | TraesCS2D01G398600 | chr4D | 87.027 | 185 | 3 | 7 | 659 | 822 | 464369733 | 464369917 | 9.640000e-44 | 189.0 |
26 | TraesCS2D01G398600 | chr5B | 93.047 | 676 | 43 | 3 | 1 | 676 | 532700034 | 532700705 | 0.000000e+00 | 985.0 |
27 | TraesCS2D01G398600 | chr5B | 89.333 | 75 | 6 | 2 | 7008 | 7082 | 108799016 | 108798944 | 7.770000e-15 | 93.5 |
28 | TraesCS2D01G398600 | chr5B | 84.932 | 73 | 9 | 2 | 7011 | 7083 | 463842599 | 463842669 | 1.010000e-08 | 73.1 |
29 | TraesCS2D01G398600 | chr5D | 83.982 | 899 | 109 | 27 | 2 | 878 | 407695279 | 407694394 | 0.000000e+00 | 830.0 |
30 | TraesCS2D01G398600 | chr7A | 82.841 | 880 | 102 | 29 | 2 | 856 | 151379200 | 151378345 | 0.000000e+00 | 743.0 |
31 | TraesCS2D01G398600 | chr7A | 74.684 | 237 | 37 | 16 | 6851 | 7082 | 146540404 | 146540622 | 4.680000e-12 | 84.2 |
32 | TraesCS2D01G398600 | chr7A | 74.348 | 230 | 37 | 15 | 6859 | 7082 | 146488207 | 146488420 | 2.180000e-10 | 78.7 |
33 | TraesCS2D01G398600 | chr7A | 74.459 | 231 | 36 | 15 | 6859 | 7082 | 146590432 | 146590646 | 2.180000e-10 | 78.7 |
34 | TraesCS2D01G398600 | chr7A | 77.600 | 125 | 26 | 2 | 1557 | 1680 | 124070546 | 124070423 | 2.820000e-09 | 75.0 |
35 | TraesCS2D01G398600 | chr1A | 90.968 | 465 | 32 | 4 | 2502 | 2966 | 68461394 | 68461848 | 1.040000e-172 | 617.0 |
36 | TraesCS2D01G398600 | chr1D | 88.645 | 273 | 17 | 9 | 2495 | 2766 | 69199795 | 69200054 | 3.280000e-83 | 320.0 |
37 | TraesCS2D01G398600 | chr1B | 83.333 | 144 | 20 | 4 | 740 | 881 | 630551899 | 630552040 | 5.930000e-26 | 130.0 |
38 | TraesCS2D01G398600 | chr6B | 83.088 | 136 | 22 | 1 | 1555 | 1689 | 485537658 | 485537793 | 9.920000e-24 | 122.0 |
39 | TraesCS2D01G398600 | chr6B | 91.304 | 46 | 2 | 1 | 6399 | 6442 | 485542860 | 485542905 | 2.190000e-05 | 62.1 |
40 | TraesCS2D01G398600 | chr6A | 83.206 | 131 | 22 | 0 | 1555 | 1685 | 474333562 | 474333432 | 3.570000e-23 | 121.0 |
41 | TraesCS2D01G398600 | chr6A | 91.304 | 46 | 2 | 1 | 6399 | 6442 | 474327721 | 474327676 | 2.190000e-05 | 62.1 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2D01G398600 | chr2D | 511687028 | 511694305 | 7277 | False | 13441.000 | 13441 | 100.00000 | 1 | 7278 | 1 | chr2D.!!$F1 | 7277 |
1 | TraesCS2D01G398600 | chr2B | 600739925 | 600746255 | 6330 | False | 1610.800 | 3110 | 88.22320 | 872 | 7278 | 5 | chr2B.!!$F3 | 6406 |
2 | TraesCS2D01G398600 | chr2B | 34583572 | 34584466 | 894 | False | 1363.000 | 1363 | 94.54900 | 1 | 875 | 1 | chr2B.!!$F1 | 874 |
3 | TraesCS2D01G398600 | chr2B | 79359742 | 79360370 | 628 | False | 725.000 | 725 | 87.46100 | 5 | 646 | 1 | chr2B.!!$F2 | 641 |
4 | TraesCS2D01G398600 | chr2A | 654907158 | 654913695 | 6537 | False | 1021.375 | 2837 | 89.83075 | 872 | 7277 | 8 | chr2A.!!$F2 | 6405 |
5 | TraesCS2D01G398600 | chr6D | 129159145 | 129160046 | 901 | True | 1358.000 | 1358 | 94.26000 | 1 | 881 | 1 | chr6D.!!$R2 | 880 |
6 | TraesCS2D01G398600 | chr3D | 562521981 | 562522875 | 894 | False | 1308.000 | 1308 | 93.43000 | 1 | 876 | 1 | chr3D.!!$F2 | 875 |
7 | TraesCS2D01G398600 | chr4D | 393642213 | 393642862 | 649 | True | 778.000 | 778 | 88.35100 | 2 | 655 | 1 | chr4D.!!$R1 | 653 |
8 | TraesCS2D01G398600 | chr4D | 464367796 | 464369917 | 2121 | False | 654.500 | 1120 | 92.01400 | 1 | 822 | 2 | chr4D.!!$F1 | 821 |
9 | TraesCS2D01G398600 | chr5B | 532700034 | 532700705 | 671 | False | 985.000 | 985 | 93.04700 | 1 | 676 | 1 | chr5B.!!$F2 | 675 |
10 | TraesCS2D01G398600 | chr5D | 407694394 | 407695279 | 885 | True | 830.000 | 830 | 83.98200 | 2 | 878 | 1 | chr5D.!!$R1 | 876 |
11 | TraesCS2D01G398600 | chr7A | 151378345 | 151379200 | 855 | True | 743.000 | 743 | 82.84100 | 2 | 856 | 1 | chr7A.!!$R2 | 854 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
930 | 2288 | 0.253610 | AAACTGGTTGACACCCGACA | 59.746 | 50.000 | 0.00 | 0.0 | 43.49 | 4.35 | F |
1229 | 2625 | 0.034896 | TCTTCTTTCTGTGGTCCGGC | 59.965 | 55.000 | 0.00 | 0.0 | 0.00 | 6.13 | F |
2572 | 4022 | 0.179275 | CGTGCATAATCGCCGAATCG | 60.179 | 55.000 | 0.00 | 0.0 | 0.00 | 3.34 | F |
3056 | 4507 | 0.179045 | AACTCGCCTGCTTCTGTGTT | 60.179 | 50.000 | 0.00 | 0.0 | 0.00 | 3.32 | F |
4728 | 6340 | 0.252375 | AGGGGCAACAGAATGGCAAT | 60.252 | 50.000 | 0.00 | 0.0 | 46.91 | 3.56 | F |
5048 | 6676 | 1.258982 | GCGTCAAATGATGTAGAGGCG | 59.741 | 52.381 | 4.67 | 0.0 | 33.14 | 5.52 | F |
5581 | 7213 | 0.261991 | AGATGCTTAGGACGGAGGGA | 59.738 | 55.000 | 0.00 | 0.0 | 0.00 | 4.20 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1789 | 3230 | 0.250467 | AACAGCTGGTTCTCGTGCAT | 60.250 | 50.0 | 19.93 | 0.0 | 33.35 | 3.96 | R |
3034 | 4484 | 0.106708 | ACAGAAGCAGGCGAGTTTGA | 59.893 | 50.0 | 0.00 | 0.0 | 0.00 | 2.69 | R |
4116 | 5728 | 0.527565 | CAACCCATGTAACCTGCAGC | 59.472 | 55.0 | 8.66 | 0.0 | 0.00 | 5.25 | R |
5033 | 6660 | 0.179018 | GCCCCGCCTCTACATCATTT | 60.179 | 55.0 | 0.00 | 0.0 | 0.00 | 2.32 | R |
5564 | 7196 | 0.032017 | ACTCCCTCCGTCCTAAGCAT | 60.032 | 55.0 | 0.00 | 0.0 | 0.00 | 3.79 | R |
5929 | 7649 | 0.035725 | TCAGAATGCTGCTGTCCTGG | 60.036 | 55.0 | 0.00 | 0.0 | 42.01 | 4.45 | R |
6809 | 8592 | 0.179004 | TGTTCACATTTCCGTGCCCT | 60.179 | 50.0 | 0.00 | 0.0 | 36.80 | 5.19 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
255 | 262 | 1.545582 | CTTTTTGCCATGTCCATCCGT | 59.454 | 47.619 | 0.00 | 0.00 | 0.00 | 4.69 |
488 | 500 | 5.534207 | TCACTTCATGGCAACTTTTCATT | 57.466 | 34.783 | 0.00 | 0.00 | 37.61 | 2.57 |
529 | 541 | 4.082787 | ACTGATGGCAATTTTTCGTACTGG | 60.083 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
682 | 2011 | 6.374613 | GGCCTTTTACTAGTCATAACTTTGCT | 59.625 | 38.462 | 0.00 | 0.00 | 36.92 | 3.91 |
784 | 2135 | 2.210711 | GGGCGATCTCCTCCCGAAT | 61.211 | 63.158 | 0.93 | 0.00 | 0.00 | 3.34 |
930 | 2288 | 0.253610 | AAACTGGTTGACACCCGACA | 59.746 | 50.000 | 0.00 | 0.00 | 43.49 | 4.35 |
992 | 2350 | 2.346541 | GGCTTTGCCCTGCCTTCTC | 61.347 | 63.158 | 0.00 | 0.00 | 44.06 | 2.87 |
993 | 2351 | 2.346541 | GCTTTGCCCTGCCTTCTCC | 61.347 | 63.158 | 0.00 | 0.00 | 0.00 | 3.71 |
994 | 2352 | 1.381851 | CTTTGCCCTGCCTTCTCCT | 59.618 | 57.895 | 0.00 | 0.00 | 0.00 | 3.69 |
998 | 2356 | 2.285668 | CCCTGCCTTCTCCTCCCA | 60.286 | 66.667 | 0.00 | 0.00 | 0.00 | 4.37 |
1091 | 2484 | 0.676782 | GACATGAACGGGTTCCCCTG | 60.677 | 60.000 | 0.00 | 6.69 | 42.67 | 4.45 |
1096 | 2489 | 2.532465 | GAACGGGTTCCCCTGCTACC | 62.532 | 65.000 | 1.93 | 0.00 | 42.67 | 3.18 |
1155 | 2548 | 4.803908 | CCGCCTTCCTCCCTTGCC | 62.804 | 72.222 | 0.00 | 0.00 | 0.00 | 4.52 |
1190 | 2583 | 2.481568 | TCTTACTCCACGTCGTGTAGTG | 59.518 | 50.000 | 27.79 | 15.52 | 33.85 | 2.74 |
1198 | 2591 | 1.542915 | ACGTCGTGTAGTGGCAACTAT | 59.457 | 47.619 | 3.76 | 0.00 | 40.95 | 2.12 |
1218 | 2614 | 7.526142 | ACTATTTGGGGTTTCTTCTTCTTTC | 57.474 | 36.000 | 0.00 | 0.00 | 0.00 | 2.62 |
1229 | 2625 | 0.034896 | TCTTCTTTCTGTGGTCCGGC | 59.965 | 55.000 | 0.00 | 0.00 | 0.00 | 6.13 |
1263 | 2660 | 1.067250 | GGCGTGCCTTTTCTTTGCA | 59.933 | 52.632 | 2.98 | 0.00 | 0.00 | 4.08 |
1805 | 3246 | 0.390866 | CTGATGCACGAGAACCAGCT | 60.391 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
1859 | 3300 | 4.715130 | CCTGTCCCTCCGGGTGGA | 62.715 | 72.222 | 16.62 | 11.74 | 44.74 | 4.02 |
1980 | 3424 | 2.097038 | CAAGAACGAGCTCAGCCGG | 61.097 | 63.158 | 15.40 | 0.00 | 0.00 | 6.13 |
2070 | 3514 | 3.818787 | CCAGTGGAGCGCATTGGC | 61.819 | 66.667 | 11.47 | 0.00 | 0.00 | 4.52 |
2226 | 3670 | 1.339438 | ACGAGTGCAATGGATGAGCTT | 60.339 | 47.619 | 2.36 | 0.00 | 0.00 | 3.74 |
2349 | 3793 | 0.691078 | TCTCACCAGCCATAGGGGTC | 60.691 | 60.000 | 0.00 | 0.00 | 44.97 | 4.46 |
2406 | 3850 | 0.447801 | CCGGCATTGTAAGCAGTGAC | 59.552 | 55.000 | 0.00 | 0.00 | 37.05 | 3.67 |
2460 | 3904 | 2.254152 | AGGTTGCCCTCATCTCACTA | 57.746 | 50.000 | 0.00 | 0.00 | 35.62 | 2.74 |
2461 | 3905 | 2.769209 | AGGTTGCCCTCATCTCACTAT | 58.231 | 47.619 | 0.00 | 0.00 | 35.62 | 2.12 |
2462 | 3906 | 2.437281 | AGGTTGCCCTCATCTCACTATG | 59.563 | 50.000 | 0.00 | 0.00 | 35.62 | 2.23 |
2467 | 3917 | 1.622811 | CCCTCATCTCACTATGCCCTC | 59.377 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
2527 | 3977 | 4.405116 | TGCCTGTTTTGAAATCTTGCTT | 57.595 | 36.364 | 0.00 | 0.00 | 0.00 | 3.91 |
2572 | 4022 | 0.179275 | CGTGCATAATCGCCGAATCG | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.34 |
2608 | 4058 | 0.685785 | TCTCTACTGGAGCTGCAGGG | 60.686 | 60.000 | 34.65 | 26.24 | 41.60 | 4.45 |
2610 | 4060 | 0.252239 | TCTACTGGAGCTGCAGGGAA | 60.252 | 55.000 | 34.65 | 20.33 | 0.00 | 3.97 |
2784 | 4234 | 3.820425 | CCTGTTAGGGAGGTGGCA | 58.180 | 61.111 | 0.00 | 0.00 | 0.00 | 4.92 |
2871 | 4321 | 0.918799 | TGGGAATGGAGCAAGGCCTA | 60.919 | 55.000 | 5.16 | 0.00 | 0.00 | 3.93 |
2945 | 4395 | 0.394352 | GTGGTGCAAGATACCCCCAG | 60.394 | 60.000 | 0.00 | 0.00 | 37.40 | 4.45 |
2990 | 4440 | 5.784177 | TCCTCTCTACATTCACTTGTTCAC | 58.216 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
3032 | 4482 | 0.516877 | TGACAGCAATGTTAGCACGC | 59.483 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
3034 | 4484 | 0.606401 | ACAGCAATGTTAGCACGCCT | 60.606 | 50.000 | 0.00 | 0.00 | 0.00 | 5.52 |
3056 | 4507 | 0.179045 | AACTCGCCTGCTTCTGTGTT | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 3.32 |
3061 | 4512 | 1.267806 | CGCCTGCTTCTGTGTTCATTT | 59.732 | 47.619 | 0.00 | 0.00 | 0.00 | 2.32 |
3069 | 4520 | 8.391106 | CCTGCTTCTGTGTTCATTTATTAGTAC | 58.609 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
3070 | 4521 | 8.263940 | TGCTTCTGTGTTCATTTATTAGTACC | 57.736 | 34.615 | 0.00 | 0.00 | 0.00 | 3.34 |
3073 | 4524 | 9.436957 | CTTCTGTGTTCATTTATTAGTACCAGT | 57.563 | 33.333 | 0.00 | 0.00 | 0.00 | 4.00 |
3075 | 4526 | 9.431887 | TCTGTGTTCATTTATTAGTACCAGTTC | 57.568 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
3078 | 4529 | 8.175716 | GTGTTCATTTATTAGTACCAGTTCTGC | 58.824 | 37.037 | 0.00 | 0.00 | 0.00 | 4.26 |
3079 | 4530 | 7.880713 | TGTTCATTTATTAGTACCAGTTCTGCA | 59.119 | 33.333 | 0.00 | 0.00 | 0.00 | 4.41 |
3080 | 4531 | 8.893727 | GTTCATTTATTAGTACCAGTTCTGCAT | 58.106 | 33.333 | 0.00 | 0.00 | 0.00 | 3.96 |
3081 | 4532 | 8.437360 | TCATTTATTAGTACCAGTTCTGCATG | 57.563 | 34.615 | 0.00 | 0.00 | 0.00 | 4.06 |
3082 | 4533 | 8.264347 | TCATTTATTAGTACCAGTTCTGCATGA | 58.736 | 33.333 | 0.00 | 0.00 | 0.00 | 3.07 |
3083 | 4534 | 7.843490 | TTTATTAGTACCAGTTCTGCATGAC | 57.157 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3084 | 4535 | 2.770164 | AGTACCAGTTCTGCATGACC | 57.230 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3085 | 4536 | 1.977854 | AGTACCAGTTCTGCATGACCA | 59.022 | 47.619 | 0.00 | 0.00 | 0.00 | 4.02 |
3086 | 4537 | 2.076863 | GTACCAGTTCTGCATGACCAC | 58.923 | 52.381 | 0.00 | 0.00 | 0.00 | 4.16 |
3087 | 4538 | 0.473755 | ACCAGTTCTGCATGACCACA | 59.526 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
3088 | 4539 | 1.074405 | ACCAGTTCTGCATGACCACAT | 59.926 | 47.619 | 0.00 | 0.00 | 37.19 | 3.21 |
3105 | 4556 | 6.373495 | TGACCACATGAGAATGATCTTTTCAG | 59.627 | 38.462 | 0.00 | 6.59 | 37.89 | 3.02 |
3106 | 4557 | 6.479006 | ACCACATGAGAATGATCTTTTCAGA | 58.521 | 36.000 | 0.00 | 0.00 | 37.89 | 3.27 |
3107 | 4558 | 6.944290 | ACCACATGAGAATGATCTTTTCAGAA | 59.056 | 34.615 | 0.00 | 0.00 | 37.89 | 3.02 |
3135 | 4642 | 3.781079 | TGCAAGTTTGTTCCAGTTCTG | 57.219 | 42.857 | 0.00 | 0.00 | 0.00 | 3.02 |
3139 | 4646 | 4.261572 | GCAAGTTTGTTCCAGTTCTGCATA | 60.262 | 41.667 | 0.00 | 0.00 | 0.00 | 3.14 |
3168 | 4675 | 5.679734 | TGAGAATGTTCTTTTCAGAGTGC | 57.320 | 39.130 | 0.00 | 0.00 | 37.73 | 4.40 |
3173 | 4680 | 7.550712 | AGAATGTTCTTTTCAGAGTGCTTTTT | 58.449 | 30.769 | 0.00 | 0.00 | 32.55 | 1.94 |
3174 | 4681 | 7.704047 | AGAATGTTCTTTTCAGAGTGCTTTTTC | 59.296 | 33.333 | 0.00 | 0.00 | 32.55 | 2.29 |
3202 | 4709 | 8.995220 | GTTGGTTTAGTGTGTTATTGACTGATA | 58.005 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
3288 | 4795 | 2.521708 | GTTGCAAGCCCACCACCT | 60.522 | 61.111 | 0.00 | 0.00 | 0.00 | 4.00 |
3313 | 4820 | 4.360563 | AGTTAGGTAATCGATTGTCAGCG | 58.639 | 43.478 | 20.87 | 0.00 | 0.00 | 5.18 |
3316 | 4823 | 1.859080 | GGTAATCGATTGTCAGCGGAC | 59.141 | 52.381 | 20.87 | 10.32 | 44.57 | 4.79 |
3393 | 4902 | 2.224354 | CCCAAGCATGTGCCTTTTCTTT | 60.224 | 45.455 | 0.57 | 0.00 | 43.38 | 2.52 |
3411 | 4920 | 9.455847 | CTTTTCTTTGTTTAATCTTGAGTCCAG | 57.544 | 33.333 | 0.00 | 0.00 | 0.00 | 3.86 |
3420 | 4929 | 8.621286 | GTTTAATCTTGAGTCCAGTTCTTGAAA | 58.379 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
3427 | 4936 | 5.163794 | TGAGTCCAGTTCTTGAAACGAAAAC | 60.164 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
3451 | 4960 | 6.173339 | CCCTATACTAACTGCCCACAATATG | 58.827 | 44.000 | 0.00 | 0.00 | 0.00 | 1.78 |
3580 | 5091 | 5.539582 | TTTGCACATCTAATTCACGTACC | 57.460 | 39.130 | 0.00 | 0.00 | 0.00 | 3.34 |
3637 | 5148 | 2.849943 | ACAAGGGGTTATGTCTGCCATA | 59.150 | 45.455 | 0.00 | 0.00 | 34.86 | 2.74 |
3669 | 5180 | 2.359107 | CACAGGCCGTGCATCAGT | 60.359 | 61.111 | 13.44 | 0.00 | 39.19 | 3.41 |
3670 | 5181 | 2.359107 | ACAGGCCGTGCATCAGTG | 60.359 | 61.111 | 0.00 | 0.00 | 0.00 | 3.66 |
3697 | 5208 | 3.244215 | TGAAGAAGGATCAGCTGTTCGTT | 60.244 | 43.478 | 25.16 | 25.16 | 0.00 | 3.85 |
3733 | 5262 | 7.175990 | TGTTATGTGGTTTCCTGTTTATCTTCC | 59.824 | 37.037 | 0.00 | 0.00 | 0.00 | 3.46 |
3738 | 5267 | 5.074515 | TGGTTTCCTGTTTATCTTCCCTTCT | 59.925 | 40.000 | 0.00 | 0.00 | 0.00 | 2.85 |
3762 | 5291 | 5.131168 | CGACTCATCGTTTGTTGATTAGG | 57.869 | 43.478 | 0.00 | 0.00 | 43.66 | 2.69 |
3856 | 5467 | 8.964476 | ACAATGTAGGAGTTCATAATAGGTTG | 57.036 | 34.615 | 0.00 | 0.00 | 0.00 | 3.77 |
3936 | 5548 | 6.201997 | ACTTGGTCAAAATATTTCGGCAAAAC | 59.798 | 34.615 | 0.10 | 0.00 | 0.00 | 2.43 |
3961 | 5573 | 9.554724 | ACGTAAAAATATGATTTGCTAACACTG | 57.445 | 29.630 | 0.00 | 0.00 | 0.00 | 3.66 |
3962 | 5574 | 8.523464 | CGTAAAAATATGATTTGCTAACACTGC | 58.477 | 33.333 | 0.00 | 0.00 | 0.00 | 4.40 |
3966 | 5578 | 9.520204 | AAAATATGATTTGCTAACACTGCATAC | 57.480 | 29.630 | 0.00 | 0.00 | 40.34 | 2.39 |
3967 | 5579 | 4.963276 | TGATTTGCTAACACTGCATACC | 57.037 | 40.909 | 0.00 | 0.00 | 40.34 | 2.73 |
3968 | 5580 | 4.331108 | TGATTTGCTAACACTGCATACCA | 58.669 | 39.130 | 0.00 | 0.00 | 40.34 | 3.25 |
3981 | 5593 | 7.617225 | ACACTGCATACCAAATACTTACACTA | 58.383 | 34.615 | 0.00 | 0.00 | 0.00 | 2.74 |
3982 | 5594 | 7.764443 | ACACTGCATACCAAATACTTACACTAG | 59.236 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
3983 | 5595 | 7.764443 | CACTGCATACCAAATACTTACACTAGT | 59.236 | 37.037 | 0.00 | 0.00 | 0.00 | 2.57 |
3984 | 5596 | 7.764443 | ACTGCATACCAAATACTTACACTAGTG | 59.236 | 37.037 | 21.44 | 21.44 | 0.00 | 2.74 |
3985 | 5597 | 7.617225 | TGCATACCAAATACTTACACTAGTGT | 58.383 | 34.615 | 30.13 | 30.13 | 46.87 | 3.55 |
3986 | 5598 | 8.098286 | TGCATACCAAATACTTACACTAGTGTT | 58.902 | 33.333 | 32.15 | 17.80 | 41.83 | 3.32 |
3987 | 5599 | 8.601476 | GCATACCAAATACTTACACTAGTGTTC | 58.399 | 37.037 | 32.15 | 2.40 | 41.83 | 3.18 |
3988 | 5600 | 9.095065 | CATACCAAATACTTACACTAGTGTTCC | 57.905 | 37.037 | 32.15 | 0.00 | 41.83 | 3.62 |
3989 | 5601 | 7.069877 | ACCAAATACTTACACTAGTGTTCCA | 57.930 | 36.000 | 32.15 | 13.27 | 41.83 | 3.53 |
3990 | 5602 | 7.159372 | ACCAAATACTTACACTAGTGTTCCAG | 58.841 | 38.462 | 32.15 | 25.00 | 41.83 | 3.86 |
3991 | 5603 | 6.092259 | CCAAATACTTACACTAGTGTTCCAGC | 59.908 | 42.308 | 32.15 | 0.00 | 41.83 | 4.85 |
3992 | 5604 | 5.995565 | ATACTTACACTAGTGTTCCAGCA | 57.004 | 39.130 | 32.15 | 16.93 | 41.83 | 4.41 |
3993 | 5605 | 4.682778 | ACTTACACTAGTGTTCCAGCAA | 57.317 | 40.909 | 32.15 | 18.19 | 41.83 | 3.91 |
3994 | 5606 | 5.031066 | ACTTACACTAGTGTTCCAGCAAA | 57.969 | 39.130 | 32.15 | 17.52 | 41.83 | 3.68 |
3995 | 5607 | 5.433526 | ACTTACACTAGTGTTCCAGCAAAA | 58.566 | 37.500 | 32.15 | 16.84 | 41.83 | 2.44 |
3996 | 5608 | 5.883673 | ACTTACACTAGTGTTCCAGCAAAAA | 59.116 | 36.000 | 32.15 | 16.17 | 41.83 | 1.94 |
4062 | 5674 | 2.424557 | CACTGCAGAGCTTGAGATTGT | 58.575 | 47.619 | 23.35 | 0.00 | 0.00 | 2.71 |
4105 | 5717 | 3.061295 | CACTTACGTGCTAACAGATGCAG | 59.939 | 47.826 | 0.00 | 0.00 | 40.06 | 4.41 |
4116 | 5728 | 5.734498 | GCTAACAGATGCAGTTGAATTTACG | 59.266 | 40.000 | 7.19 | 0.00 | 0.00 | 3.18 |
4149 | 5761 | 8.823818 | GTTACATGGGTTGAACATACAGTATAC | 58.176 | 37.037 | 0.00 | 0.00 | 0.00 | 1.47 |
4257 | 5869 | 1.473965 | CGCCAGTATGACTGCTTGGAT | 60.474 | 52.381 | 0.89 | 0.00 | 44.63 | 3.41 |
4304 | 5916 | 9.347934 | CTCGTCAGGTACAGAAATATGATAATC | 57.652 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
4330 | 5942 | 5.620654 | GCAACATCTATGTGACATGCTTTGT | 60.621 | 40.000 | 8.61 | 4.14 | 41.61 | 2.83 |
4643 | 6255 | 3.819368 | TCAACTTCCTGTGCAATGAGAA | 58.181 | 40.909 | 0.00 | 0.00 | 0.00 | 2.87 |
4647 | 6259 | 3.319122 | ACTTCCTGTGCAATGAGAAAACC | 59.681 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
4650 | 6262 | 1.879380 | CTGTGCAATGAGAAAACCCGA | 59.121 | 47.619 | 0.00 | 0.00 | 0.00 | 5.14 |
4728 | 6340 | 0.252375 | AGGGGCAACAGAATGGCAAT | 60.252 | 50.000 | 0.00 | 0.00 | 46.91 | 3.56 |
4871 | 6487 | 5.129155 | AGTGATCTAGAAGCTGAGCTCATTT | 59.871 | 40.000 | 18.63 | 14.73 | 38.25 | 2.32 |
4907 | 6525 | 4.661222 | TGGGAACAATGCATCACTTTAGA | 58.339 | 39.130 | 0.00 | 0.00 | 37.44 | 2.10 |
5033 | 6660 | 2.327343 | GCATTGGCTCTGTGCGTCA | 61.327 | 57.895 | 0.00 | 0.00 | 44.05 | 4.35 |
5048 | 6676 | 1.258982 | GCGTCAAATGATGTAGAGGCG | 59.741 | 52.381 | 4.67 | 0.00 | 33.14 | 5.52 |
5120 | 6748 | 2.220824 | CGAATGAAGCGTGTGAAGTTGA | 59.779 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
5166 | 6796 | 1.615392 | AGATGTTTTCACCAGCCTTGC | 59.385 | 47.619 | 0.00 | 0.00 | 0.00 | 4.01 |
5337 | 6968 | 6.502136 | AACTAGCATAGAACTTGAAAAGGC | 57.498 | 37.500 | 0.00 | 0.00 | 45.75 | 4.35 |
5349 | 6980 | 5.902613 | CTTGAAAAGGCAATGGTCAGATA | 57.097 | 39.130 | 0.00 | 0.00 | 41.27 | 1.98 |
5382 | 7013 | 6.319658 | TGGAGGAGAAATATGAAACAGCAATC | 59.680 | 38.462 | 0.00 | 0.00 | 0.00 | 2.67 |
5383 | 7014 | 6.369059 | AGGAGAAATATGAAACAGCAATCG | 57.631 | 37.500 | 0.00 | 0.00 | 0.00 | 3.34 |
5397 | 7028 | 4.764823 | ACAGCAATCGTTATTTTCTTGGGA | 59.235 | 37.500 | 0.00 | 0.00 | 0.00 | 4.37 |
5402 | 7033 | 2.158058 | TCGTTATTTTCTTGGGAACGCG | 59.842 | 45.455 | 3.53 | 3.53 | 41.89 | 6.01 |
5419 | 7050 | 1.349234 | GCGCCCAAATGTGTCATTTC | 58.651 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
5449 | 7080 | 6.060788 | AGAAGAAAACAGCAAGAGACTGAAT | 58.939 | 36.000 | 0.00 | 0.00 | 38.55 | 2.57 |
5481 | 7112 | 8.732746 | AGTAAATTAGGATGTGTGTTGGTATC | 57.267 | 34.615 | 0.00 | 0.00 | 0.00 | 2.24 |
5484 | 7115 | 3.973206 | AGGATGTGTGTTGGTATCGAA | 57.027 | 42.857 | 0.00 | 0.00 | 0.00 | 3.71 |
5485 | 7116 | 3.861840 | AGGATGTGTGTTGGTATCGAAG | 58.138 | 45.455 | 0.00 | 0.00 | 0.00 | 3.79 |
5487 | 7118 | 4.000988 | GGATGTGTGTTGGTATCGAAGTT | 58.999 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
5488 | 7119 | 4.092968 | GGATGTGTGTTGGTATCGAAGTTC | 59.907 | 45.833 | 0.00 | 0.00 | 0.00 | 3.01 |
5489 | 7120 | 4.330944 | TGTGTGTTGGTATCGAAGTTCT | 57.669 | 40.909 | 0.56 | 0.00 | 0.00 | 3.01 |
5490 | 7121 | 4.699637 | TGTGTGTTGGTATCGAAGTTCTT | 58.300 | 39.130 | 0.56 | 0.00 | 0.00 | 2.52 |
5491 | 7122 | 5.120399 | TGTGTGTTGGTATCGAAGTTCTTT | 58.880 | 37.500 | 0.56 | 0.00 | 0.00 | 2.52 |
5492 | 7123 | 5.587043 | TGTGTGTTGGTATCGAAGTTCTTTT | 59.413 | 36.000 | 0.56 | 0.00 | 0.00 | 2.27 |
5493 | 7124 | 6.134061 | GTGTGTTGGTATCGAAGTTCTTTTC | 58.866 | 40.000 | 0.56 | 0.00 | 0.00 | 2.29 |
5494 | 7125 | 5.237779 | TGTGTTGGTATCGAAGTTCTTTTCC | 59.762 | 40.000 | 0.56 | 0.00 | 0.00 | 3.13 |
5495 | 7126 | 5.237779 | GTGTTGGTATCGAAGTTCTTTTCCA | 59.762 | 40.000 | 0.56 | 2.47 | 0.00 | 3.53 |
5512 | 7143 | 8.885494 | TCTTTTCCAAAACCAAATTAGATGTG | 57.115 | 30.769 | 0.00 | 0.00 | 0.00 | 3.21 |
5528 | 7159 | 4.579869 | AGATGTGCTTTTAGGATTCGTGT | 58.420 | 39.130 | 0.00 | 0.00 | 0.00 | 4.49 |
5550 | 7182 | 5.762711 | TGTAGTCAAGCTTGAATTACTGCAA | 59.237 | 36.000 | 31.71 | 16.65 | 39.21 | 4.08 |
5572 | 7204 | 5.741388 | ATTCGTGCTTTTAGATGCTTAGG | 57.259 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
5573 | 7205 | 4.465632 | TCGTGCTTTTAGATGCTTAGGA | 57.534 | 40.909 | 0.00 | 0.00 | 0.00 | 2.94 |
5574 | 7206 | 4.181578 | TCGTGCTTTTAGATGCTTAGGAC | 58.818 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
5575 | 7207 | 3.000322 | CGTGCTTTTAGATGCTTAGGACG | 60.000 | 47.826 | 0.00 | 0.00 | 42.48 | 4.79 |
5576 | 7208 | 3.309954 | GTGCTTTTAGATGCTTAGGACGG | 59.690 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
5577 | 7209 | 3.196901 | TGCTTTTAGATGCTTAGGACGGA | 59.803 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
5578 | 7210 | 3.804873 | GCTTTTAGATGCTTAGGACGGAG | 59.195 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
5579 | 7211 | 4.372656 | CTTTTAGATGCTTAGGACGGAGG | 58.627 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
5580 | 7212 | 1.996798 | TAGATGCTTAGGACGGAGGG | 58.003 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5581 | 7213 | 0.261991 | AGATGCTTAGGACGGAGGGA | 59.738 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
5582 | 7214 | 0.676736 | GATGCTTAGGACGGAGGGAG | 59.323 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5621 | 7253 | 1.798813 | AGTGCTCGAAATCAAACGTCC | 59.201 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
5623 | 7255 | 2.159627 | GTGCTCGAAATCAAACGTCCAT | 59.840 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
5626 | 7258 | 5.233476 | GTGCTCGAAATCAAACGTCCATATA | 59.767 | 40.000 | 0.00 | 0.00 | 0.00 | 0.86 |
5627 | 7259 | 5.989168 | TGCTCGAAATCAAACGTCCATATAT | 59.011 | 36.000 | 0.00 | 0.00 | 0.00 | 0.86 |
5628 | 7260 | 6.073819 | TGCTCGAAATCAAACGTCCATATATG | 60.074 | 38.462 | 5.68 | 5.68 | 0.00 | 1.78 |
5631 | 7263 | 8.426881 | TCGAAATCAAACGTCCATATATGAAA | 57.573 | 30.769 | 14.54 | 0.00 | 0.00 | 2.69 |
5632 | 7264 | 8.884726 | TCGAAATCAAACGTCCATATATGAAAA | 58.115 | 29.630 | 14.54 | 0.00 | 0.00 | 2.29 |
5634 | 7266 | 9.781834 | GAAATCAAACGTCCATATATGAAAACA | 57.218 | 29.630 | 14.54 | 0.00 | 0.00 | 2.83 |
5635 | 7267 | 9.787532 | AAATCAAACGTCCATATATGAAAACAG | 57.212 | 29.630 | 14.54 | 8.13 | 0.00 | 3.16 |
5636 | 7268 | 6.781138 | TCAAACGTCCATATATGAAAACAGC | 58.219 | 36.000 | 14.54 | 0.00 | 0.00 | 4.40 |
5637 | 7269 | 6.372937 | TCAAACGTCCATATATGAAAACAGCA | 59.627 | 34.615 | 14.54 | 0.00 | 0.00 | 4.41 |
5639 | 7271 | 6.363577 | ACGTCCATATATGAAAACAGCAAG | 57.636 | 37.500 | 14.54 | 0.00 | 0.00 | 4.01 |
5640 | 7272 | 5.296780 | ACGTCCATATATGAAAACAGCAAGG | 59.703 | 40.000 | 14.54 | 0.00 | 0.00 | 3.61 |
5641 | 7273 | 5.523369 | GTCCATATATGAAAACAGCAAGGC | 58.477 | 41.667 | 14.54 | 0.00 | 0.00 | 4.35 |
5642 | 7274 | 5.300286 | GTCCATATATGAAAACAGCAAGGCT | 59.700 | 40.000 | 14.54 | 0.00 | 40.77 | 4.58 |
5643 | 7275 | 5.532406 | TCCATATATGAAAACAGCAAGGCTC | 59.468 | 40.000 | 14.54 | 0.00 | 36.40 | 4.70 |
5644 | 7276 | 5.446709 | CATATATGAAAACAGCAAGGCTCG | 58.553 | 41.667 | 6.92 | 0.00 | 36.40 | 5.03 |
5645 | 7277 | 1.896220 | ATGAAAACAGCAAGGCTCGA | 58.104 | 45.000 | 0.00 | 0.00 | 36.40 | 4.04 |
5646 | 7278 | 1.229428 | TGAAAACAGCAAGGCTCGAG | 58.771 | 50.000 | 8.45 | 8.45 | 36.40 | 4.04 |
5647 | 7279 | 1.202639 | TGAAAACAGCAAGGCTCGAGA | 60.203 | 47.619 | 18.75 | 0.00 | 36.40 | 4.04 |
5648 | 7280 | 2.079925 | GAAAACAGCAAGGCTCGAGAT | 58.920 | 47.619 | 18.75 | 0.00 | 36.40 | 2.75 |
5649 | 7281 | 1.731720 | AAACAGCAAGGCTCGAGATC | 58.268 | 50.000 | 18.75 | 7.39 | 36.40 | 2.75 |
5650 | 7282 | 0.610174 | AACAGCAAGGCTCGAGATCA | 59.390 | 50.000 | 18.75 | 0.00 | 36.40 | 2.92 |
5651 | 7283 | 0.610174 | ACAGCAAGGCTCGAGATCAA | 59.390 | 50.000 | 18.75 | 0.00 | 36.40 | 2.57 |
5652 | 7284 | 1.002430 | ACAGCAAGGCTCGAGATCAAA | 59.998 | 47.619 | 18.75 | 0.00 | 36.40 | 2.69 |
5653 | 7285 | 2.286872 | CAGCAAGGCTCGAGATCAAAT | 58.713 | 47.619 | 18.75 | 0.00 | 36.40 | 2.32 |
5654 | 7286 | 2.031807 | CAGCAAGGCTCGAGATCAAATG | 59.968 | 50.000 | 18.75 | 6.66 | 36.40 | 2.32 |
5686 | 7373 | 6.446781 | AATAATTCATGCAGTCAAGTGGAG | 57.553 | 37.500 | 0.00 | 0.00 | 0.00 | 3.86 |
5707 | 7394 | 6.543465 | TGGAGACATATATGAAAACAGCAAGG | 59.457 | 38.462 | 19.63 | 0.00 | 33.40 | 3.61 |
5785 | 7477 | 4.160065 | TGTGCCATTTTGGGTGATCATAAG | 59.840 | 41.667 | 0.00 | 0.00 | 38.19 | 1.73 |
5796 | 7492 | 6.840527 | TGGGTGATCATAAGCATCTAATTGA | 58.159 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
5823 | 7519 | 4.749245 | AACCTCATCGTGTTGTTTGATC | 57.251 | 40.909 | 0.00 | 0.00 | 0.00 | 2.92 |
5824 | 7520 | 3.738982 | ACCTCATCGTGTTGTTTGATCA | 58.261 | 40.909 | 0.00 | 0.00 | 0.00 | 2.92 |
5848 | 7544 | 3.797039 | TCTGGCTTCAGGATGTTAATCG | 58.203 | 45.455 | 0.00 | 0.00 | 38.96 | 3.34 |
5866 | 7577 | 2.426522 | TCGTGCTTGATTTCTTCCTGG | 58.573 | 47.619 | 0.00 | 0.00 | 0.00 | 4.45 |
5890 | 7601 | 4.523173 | CCTTCCTTTTTCTTACCTCAACCC | 59.477 | 45.833 | 0.00 | 0.00 | 0.00 | 4.11 |
5929 | 7649 | 2.917227 | CAGGCCCCAAACACCCAC | 60.917 | 66.667 | 0.00 | 0.00 | 0.00 | 4.61 |
6121 | 7841 | 3.371063 | ATGTCTGGCGACGACGGT | 61.371 | 61.111 | 9.87 | 0.00 | 43.21 | 4.83 |
6133 | 7853 | 0.387929 | ACGACGGTCACAAGACATGT | 59.612 | 50.000 | 9.10 | 0.00 | 46.80 | 3.21 |
6292 | 8012 | 1.153667 | CTGAGCGAGCTTGGAGACC | 60.154 | 63.158 | 2.37 | 0.00 | 0.00 | 3.85 |
6340 | 8060 | 2.047179 | GCAGACGGTGAAGGGTCC | 60.047 | 66.667 | 0.00 | 0.00 | 33.66 | 4.46 |
6342 | 8062 | 1.255667 | GCAGACGGTGAAGGGTCCTA | 61.256 | 60.000 | 0.00 | 0.00 | 33.66 | 2.94 |
6343 | 8063 | 1.263356 | CAGACGGTGAAGGGTCCTAA | 58.737 | 55.000 | 0.00 | 0.00 | 33.66 | 2.69 |
6447 | 8200 | 1.475403 | CTTCTCCCGGCTGTTCTCTA | 58.525 | 55.000 | 0.00 | 0.00 | 0.00 | 2.43 |
6453 | 8206 | 0.179073 | CCGGCTGTTCTCTACCATGG | 60.179 | 60.000 | 11.19 | 11.19 | 0.00 | 3.66 |
6557 | 8310 | 5.066505 | GGTAGCTATGAGGTTCCATGTTTTG | 59.933 | 44.000 | 0.00 | 0.00 | 33.95 | 2.44 |
6559 | 8312 | 3.131046 | GCTATGAGGTTCCATGTTTTGGG | 59.869 | 47.826 | 0.00 | 0.00 | 46.45 | 4.12 |
6560 | 8313 | 2.008242 | TGAGGTTCCATGTTTTGGGG | 57.992 | 50.000 | 0.00 | 0.00 | 46.45 | 4.96 |
6564 | 8317 | 4.202727 | TGAGGTTCCATGTTTTGGGGATAA | 60.203 | 41.667 | 0.00 | 0.00 | 46.45 | 1.75 |
6605 | 8358 | 1.092345 | GGAACTCGCTCTGAATGGCC | 61.092 | 60.000 | 0.00 | 0.00 | 0.00 | 5.36 |
6653 | 8406 | 2.087646 | CTTTTGAGGCAGCCTTAGGTC | 58.912 | 52.381 | 17.46 | 2.56 | 31.76 | 3.85 |
6679 | 8432 | 5.052693 | AGAATGGTATCCAGCAAGCAATA | 57.947 | 39.130 | 0.00 | 0.00 | 36.75 | 1.90 |
6680 | 8433 | 5.068636 | AGAATGGTATCCAGCAAGCAATAG | 58.931 | 41.667 | 0.00 | 0.00 | 36.75 | 1.73 |
6681 | 8434 | 3.931907 | TGGTATCCAGCAAGCAATAGT | 57.068 | 42.857 | 0.00 | 0.00 | 0.00 | 2.12 |
6682 | 8435 | 3.808728 | TGGTATCCAGCAAGCAATAGTC | 58.191 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
6683 | 8436 | 3.199727 | TGGTATCCAGCAAGCAATAGTCA | 59.800 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
6686 | 8439 | 3.920231 | TCCAGCAAGCAATAGTCATCT | 57.080 | 42.857 | 0.00 | 0.00 | 0.00 | 2.90 |
6687 | 8440 | 5.557576 | ATCCAGCAAGCAATAGTCATCTA | 57.442 | 39.130 | 0.00 | 0.00 | 0.00 | 1.98 |
6695 | 8450 | 8.428063 | AGCAAGCAATAGTCATCTACTAGAAAT | 58.572 | 33.333 | 0.00 | 0.00 | 43.90 | 2.17 |
6732 | 8494 | 3.562141 | TGTTGTTTTGTCATGTACTCCCG | 59.438 | 43.478 | 0.00 | 0.00 | 0.00 | 5.14 |
6748 | 8510 | 1.200484 | TCCCGCCGTTTCAAAATAAGC | 59.800 | 47.619 | 0.00 | 0.00 | 0.00 | 3.09 |
6752 | 8514 | 1.902504 | GCCGTTTCAAAATAAGCGTCG | 59.097 | 47.619 | 0.00 | 0.00 | 32.02 | 5.12 |
6782 | 8559 | 1.993956 | TCCACCACACTCATTTTGGG | 58.006 | 50.000 | 0.00 | 0.00 | 34.41 | 4.12 |
6793 | 8570 | 1.065709 | TCATTTTGGGACGTAGGGAGC | 60.066 | 52.381 | 0.00 | 0.00 | 0.00 | 4.70 |
6869 | 8652 | 3.260884 | TGGGACATGGAGTTTCTACACTC | 59.739 | 47.826 | 0.00 | 0.00 | 42.34 | 3.51 |
6878 | 8661 | 5.221722 | TGGAGTTTCTACACTCAGCTCAAAT | 60.222 | 40.000 | 3.39 | 0.00 | 44.53 | 2.32 |
6892 | 8679 | 2.858344 | GCTCAAATGCATCATGAACAGC | 59.142 | 45.455 | 14.07 | 5.31 | 0.00 | 4.40 |
6895 | 8682 | 4.884247 | TCAAATGCATCATGAACAGCAAA | 58.116 | 34.783 | 20.08 | 7.82 | 40.76 | 3.68 |
6896 | 8683 | 5.298347 | TCAAATGCATCATGAACAGCAAAA | 58.702 | 33.333 | 20.08 | 7.55 | 40.76 | 2.44 |
6897 | 8684 | 5.935206 | TCAAATGCATCATGAACAGCAAAAT | 59.065 | 32.000 | 20.08 | 10.18 | 40.76 | 1.82 |
6898 | 8685 | 7.097834 | TCAAATGCATCATGAACAGCAAAATA | 58.902 | 30.769 | 20.08 | 8.07 | 40.76 | 1.40 |
6899 | 8686 | 7.603024 | TCAAATGCATCATGAACAGCAAAATAA | 59.397 | 29.630 | 20.08 | 7.03 | 40.76 | 1.40 |
6900 | 8687 | 7.908827 | AATGCATCATGAACAGCAAAATAAA | 57.091 | 28.000 | 20.08 | 1.25 | 40.76 | 1.40 |
6901 | 8688 | 7.908827 | ATGCATCATGAACAGCAAAATAAAA | 57.091 | 28.000 | 20.08 | 0.67 | 40.76 | 1.52 |
6902 | 8689 | 7.725818 | TGCATCATGAACAGCAAAATAAAAA | 57.274 | 28.000 | 15.69 | 0.00 | 33.48 | 1.94 |
7025 | 8812 | 2.474735 | CCGGGCAAAAGAAACAAAATCG | 59.525 | 45.455 | 0.00 | 0.00 | 0.00 | 3.34 |
7035 | 8822 | 5.051891 | AGAAACAAAATCGATGCTCCAAG | 57.948 | 39.130 | 0.00 | 0.00 | 0.00 | 3.61 |
7040 | 8828 | 6.029346 | ACAAAATCGATGCTCCAAGAAAAT | 57.971 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
7077 | 8865 | 7.933033 | AGCATTTTGGAGTGTTGATTTTGTTAT | 59.067 | 29.630 | 0.00 | 0.00 | 0.00 | 1.89 |
7098 | 8886 | 3.396260 | TTTTTACCGAGACCTCCACAG | 57.604 | 47.619 | 0.00 | 0.00 | 0.00 | 3.66 |
7103 | 8891 | 1.607801 | CCGAGACCTCCACAGATGCA | 61.608 | 60.000 | 0.00 | 0.00 | 0.00 | 3.96 |
7110 | 8898 | 3.499338 | ACCTCCACAGATGCAATTTCAA | 58.501 | 40.909 | 0.00 | 0.00 | 0.00 | 2.69 |
7113 | 8901 | 4.482386 | CTCCACAGATGCAATTTCAACAG | 58.518 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
7114 | 8902 | 3.890756 | TCCACAGATGCAATTTCAACAGT | 59.109 | 39.130 | 0.00 | 0.00 | 0.00 | 3.55 |
7115 | 8903 | 4.341806 | TCCACAGATGCAATTTCAACAGTT | 59.658 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
7116 | 8904 | 5.051816 | CCACAGATGCAATTTCAACAGTTT | 58.948 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
7117 | 8905 | 5.050634 | CCACAGATGCAATTTCAACAGTTTG | 60.051 | 40.000 | 0.00 | 0.00 | 0.00 | 2.93 |
7118 | 8906 | 4.508861 | ACAGATGCAATTTCAACAGTTTGC | 59.491 | 37.500 | 0.00 | 0.62 | 43.60 | 3.68 |
7121 | 8909 | 2.602211 | TGCAATTTCAACAGTTTGCACG | 59.398 | 40.909 | 5.63 | 0.00 | 46.76 | 5.34 |
7210 | 9007 | 7.781548 | TTTTCAGATTTTACTATCCGTAGCC | 57.218 | 36.000 | 0.00 | 0.00 | 0.00 | 3.93 |
7239 | 9036 | 5.745312 | TTTGAGCTCAGGATTAGAAGACA | 57.255 | 39.130 | 17.43 | 0.00 | 0.00 | 3.41 |
7263 | 9067 | 8.885722 | ACAACTTTCGTAAACTCTGTTCATAAA | 58.114 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
191 | 197 | 5.617528 | AATGCATTTAATTGCCATGGAGA | 57.382 | 34.783 | 18.40 | 2.33 | 42.06 | 3.71 |
192 | 198 | 6.687081 | AAAATGCATTTAATTGCCATGGAG | 57.313 | 33.333 | 24.35 | 0.00 | 42.06 | 3.86 |
255 | 262 | 5.948758 | TGTAATGGCCATGACAAACATTCTA | 59.051 | 36.000 | 30.67 | 6.72 | 37.07 | 2.10 |
608 | 631 | 5.046448 | TGCCATGGACTTTTGCAATTCTATT | 60.046 | 36.000 | 18.40 | 0.00 | 0.00 | 1.73 |
784 | 2135 | 1.202758 | AGCATGGACCGAACAAACTCA | 60.203 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
849 | 2206 | 0.801067 | CGATGACTCCCGAACGTTCC | 60.801 | 60.000 | 22.07 | 7.79 | 0.00 | 3.62 |
864 | 2221 | 4.741185 | TCCGTTAAAATATGGACGTCGATG | 59.259 | 41.667 | 21.67 | 2.26 | 33.95 | 3.84 |
992 | 2350 | 2.124151 | CCCTCGGCATTTGGGAGG | 60.124 | 66.667 | 0.00 | 0.00 | 45.56 | 4.30 |
993 | 2351 | 2.998097 | TCCCTCGGCATTTGGGAG | 59.002 | 61.111 | 0.00 | 0.00 | 44.37 | 4.30 |
998 | 2356 | 1.257750 | GCCCTTTTCCCTCGGCATTT | 61.258 | 55.000 | 0.00 | 0.00 | 41.25 | 2.32 |
1024 | 2411 | 0.872388 | CCGTCGAAGAAACCCCAAAG | 59.128 | 55.000 | 0.00 | 0.00 | 39.69 | 2.77 |
1143 | 2536 | 3.566016 | TACCGGGGCAAGGGAGGAA | 62.566 | 63.158 | 6.32 | 0.00 | 0.00 | 3.36 |
1190 | 2583 | 3.832490 | AGAAGAAACCCCAAATAGTTGCC | 59.168 | 43.478 | 0.00 | 0.00 | 33.01 | 4.52 |
1198 | 2591 | 5.127031 | CACAGAAAGAAGAAGAAACCCCAAA | 59.873 | 40.000 | 0.00 | 0.00 | 0.00 | 3.28 |
1229 | 2625 | 2.742372 | CCTTTCGCAGTCACCGGG | 60.742 | 66.667 | 6.32 | 0.00 | 0.00 | 5.73 |
1234 | 2630 | 3.345808 | GCACGCCTTTCGCAGTCA | 61.346 | 61.111 | 0.00 | 0.00 | 43.23 | 3.41 |
1261 | 2658 | 0.740737 | CACGGGAAAGGGATCAATGC | 59.259 | 55.000 | 0.00 | 0.00 | 0.00 | 3.56 |
1263 | 2660 | 0.395724 | GCCACGGGAAAGGGATCAAT | 60.396 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
1328 | 2734 | 2.509336 | GAGGTGGCGTGTCATCGG | 60.509 | 66.667 | 0.00 | 0.00 | 0.00 | 4.18 |
1486 | 2892 | 2.234896 | TGAAGGGACGTATGGGTACA | 57.765 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
1699 | 3131 | 1.142778 | GATCGAGAGTGTTGGAGCGC | 61.143 | 60.000 | 0.00 | 0.00 | 0.00 | 5.92 |
1789 | 3230 | 0.250467 | AACAGCTGGTTCTCGTGCAT | 60.250 | 50.000 | 19.93 | 0.00 | 33.35 | 3.96 |
1805 | 3246 | 1.375396 | CCGTTCTCCGCCATCAACA | 60.375 | 57.895 | 0.00 | 0.00 | 34.38 | 3.33 |
2124 | 3568 | 1.604593 | CACTGTTTGGCTGGAGGGG | 60.605 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
2226 | 3670 | 0.745486 | CCATCTGCGCCATCTTGACA | 60.745 | 55.000 | 4.18 | 0.00 | 0.00 | 3.58 |
2355 | 3799 | 1.145377 | CTCGGATACAAACCCCGGG | 59.855 | 63.158 | 15.80 | 15.80 | 43.16 | 5.73 |
2452 | 3896 | 2.090267 | AGAAGGGAGGGCATAGTGAGAT | 60.090 | 50.000 | 0.00 | 0.00 | 0.00 | 2.75 |
2460 | 3904 | 1.604378 | CAACGAGAAGGGAGGGCAT | 59.396 | 57.895 | 0.00 | 0.00 | 0.00 | 4.40 |
2461 | 3905 | 3.068881 | CAACGAGAAGGGAGGGCA | 58.931 | 61.111 | 0.00 | 0.00 | 0.00 | 5.36 |
2462 | 3906 | 1.614241 | TAGCAACGAGAAGGGAGGGC | 61.614 | 60.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2467 | 3917 | 1.486726 | AGGGAATAGCAACGAGAAGGG | 59.513 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 |
2572 | 4022 | 0.810823 | AGATCTCCTCGGTCGTCGAC | 60.811 | 60.000 | 17.16 | 17.16 | 43.74 | 4.20 |
2580 | 4030 | 2.778299 | CTCCAGTAGAGATCTCCTCGG | 58.222 | 57.143 | 19.30 | 14.17 | 46.50 | 4.63 |
2608 | 4058 | 3.304525 | GCAGCAATGCACCATCTCTATTC | 60.305 | 47.826 | 8.35 | 0.00 | 34.41 | 1.75 |
2610 | 4060 | 2.158652 | AGCAGCAATGCACCATCTCTAT | 60.159 | 45.455 | 8.35 | 0.00 | 37.25 | 1.98 |
2784 | 4234 | 4.210331 | ACTGTTTGCAGAACCTGAGAAAT | 58.790 | 39.130 | 1.30 | 0.00 | 45.28 | 2.17 |
2856 | 4306 | 1.228510 | GGCTAGGCCTTGCTCCATT | 59.771 | 57.895 | 33.16 | 0.00 | 46.69 | 3.16 |
2945 | 4395 | 0.875059 | GTGTACCTTGCAGAAGCCAC | 59.125 | 55.000 | 0.00 | 0.00 | 41.13 | 5.01 |
2990 | 4440 | 1.894466 | TGCCAACCCAAGAACATGATG | 59.106 | 47.619 | 0.00 | 0.00 | 0.00 | 3.07 |
3032 | 4482 | 0.321122 | AGAAGCAGGCGAGTTTGAGG | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
3034 | 4484 | 0.106708 | ACAGAAGCAGGCGAGTTTGA | 59.893 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
3056 | 4507 | 8.264347 | TCATGCAGAACTGGTACTAATAAATGA | 58.736 | 33.333 | 3.99 | 0.00 | 0.00 | 2.57 |
3061 | 4512 | 5.423931 | TGGTCATGCAGAACTGGTACTAATA | 59.576 | 40.000 | 3.99 | 0.00 | 34.06 | 0.98 |
3069 | 4520 | 1.471287 | CATGTGGTCATGCAGAACTGG | 59.529 | 52.381 | 3.99 | 0.00 | 43.66 | 4.00 |
3070 | 4521 | 2.913777 | CATGTGGTCATGCAGAACTG | 57.086 | 50.000 | 0.00 | 0.00 | 43.66 | 3.16 |
3078 | 4529 | 7.148137 | TGAAAAGATCATTCTCATGTGGTCATG | 60.148 | 37.037 | 11.21 | 2.27 | 41.74 | 3.07 |
3079 | 4530 | 6.888088 | TGAAAAGATCATTCTCATGTGGTCAT | 59.112 | 34.615 | 11.21 | 0.00 | 31.50 | 3.06 |
3080 | 4531 | 6.240145 | TGAAAAGATCATTCTCATGTGGTCA | 58.760 | 36.000 | 11.21 | 0.00 | 31.50 | 4.02 |
3081 | 4532 | 6.596888 | TCTGAAAAGATCATTCTCATGTGGTC | 59.403 | 38.462 | 11.21 | 0.00 | 37.44 | 4.02 |
3082 | 4533 | 6.479006 | TCTGAAAAGATCATTCTCATGTGGT | 58.521 | 36.000 | 11.21 | 0.00 | 37.44 | 4.16 |
3083 | 4534 | 6.997239 | TCTGAAAAGATCATTCTCATGTGG | 57.003 | 37.500 | 11.21 | 0.00 | 37.44 | 4.17 |
3084 | 4535 | 7.432545 | GCATTCTGAAAAGATCATTCTCATGTG | 59.567 | 37.037 | 11.21 | 0.00 | 37.44 | 3.21 |
3085 | 4536 | 7.481642 | GCATTCTGAAAAGATCATTCTCATGT | 58.518 | 34.615 | 11.21 | 0.00 | 37.44 | 3.21 |
3086 | 4537 | 6.633234 | CGCATTCTGAAAAGATCATTCTCATG | 59.367 | 38.462 | 11.21 | 10.68 | 37.44 | 3.07 |
3087 | 4538 | 6.541278 | TCGCATTCTGAAAAGATCATTCTCAT | 59.459 | 34.615 | 11.21 | 1.07 | 37.44 | 2.90 |
3088 | 4539 | 5.876460 | TCGCATTCTGAAAAGATCATTCTCA | 59.124 | 36.000 | 11.21 | 4.80 | 37.44 | 3.27 |
3090 | 4541 | 6.748333 | TTCGCATTCTGAAAAGATCATTCT | 57.252 | 33.333 | 11.21 | 0.00 | 37.44 | 2.40 |
3091 | 4542 | 7.514747 | GCATTTCGCATTCTGAAAAGATCATTC | 60.515 | 37.037 | 0.00 | 0.00 | 38.68 | 2.67 |
3093 | 4544 | 5.747197 | GCATTTCGCATTCTGAAAAGATCAT | 59.253 | 36.000 | 0.00 | 0.00 | 38.68 | 2.45 |
3094 | 4545 | 5.097529 | GCATTTCGCATTCTGAAAAGATCA | 58.902 | 37.500 | 0.00 | 0.00 | 38.68 | 2.92 |
3095 | 4546 | 5.617028 | GCATTTCGCATTCTGAAAAGATC | 57.383 | 39.130 | 0.00 | 0.00 | 38.68 | 2.75 |
3105 | 4556 | 6.748972 | TGGAACAAACTTGCATTTCGCATTC | 61.749 | 40.000 | 0.00 | 0.00 | 44.66 | 2.67 |
3106 | 4557 | 4.977132 | TGGAACAAACTTGCATTTCGCATT | 60.977 | 37.500 | 0.00 | 0.00 | 44.66 | 3.56 |
3107 | 4558 | 3.492309 | TGGAACAAACTTGCATTTCGCAT | 60.492 | 39.130 | 0.00 | 0.00 | 44.66 | 4.73 |
3135 | 4642 | 5.824904 | AGAACATTCTCATGTGGTTATGC | 57.175 | 39.130 | 0.00 | 0.00 | 43.34 | 3.14 |
3139 | 4646 | 6.547141 | TCTGAAAAGAACATTCTCATGTGGTT | 59.453 | 34.615 | 0.00 | 0.00 | 43.34 | 3.67 |
3168 | 4675 | 9.581099 | AATAACACACTAAACCAACTGAAAAAG | 57.419 | 29.630 | 0.00 | 0.00 | 0.00 | 2.27 |
3173 | 4680 | 7.011950 | CAGTCAATAACACACTAAACCAACTGA | 59.988 | 37.037 | 0.00 | 0.00 | 31.83 | 3.41 |
3174 | 4681 | 7.011950 | TCAGTCAATAACACACTAAACCAACTG | 59.988 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
3202 | 4709 | 5.333299 | TGTGAATACTATACAGCACGGTT | 57.667 | 39.130 | 0.00 | 0.00 | 0.00 | 4.44 |
3288 | 4795 | 5.810587 | GCTGACAATCGATTACCTAACTTGA | 59.189 | 40.000 | 10.97 | 0.00 | 0.00 | 3.02 |
3313 | 4820 | 4.583073 | ACAAATCACTTGTTTACCCTGTCC | 59.417 | 41.667 | 0.00 | 0.00 | 46.49 | 4.02 |
3316 | 4823 | 5.766150 | TCACAAATCACTTGTTTACCCTG | 57.234 | 39.130 | 0.00 | 0.00 | 46.49 | 4.45 |
3393 | 4902 | 7.279615 | TCAAGAACTGGACTCAAGATTAAACA | 58.720 | 34.615 | 0.00 | 0.00 | 0.00 | 2.83 |
3411 | 4920 | 7.430992 | AGTATAGGGTTTTCGTTTCAAGAAC | 57.569 | 36.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3420 | 4929 | 4.383444 | GGGCAGTTAGTATAGGGTTTTCGT | 60.383 | 45.833 | 0.00 | 0.00 | 0.00 | 3.85 |
3427 | 4936 | 4.706842 | ATTGTGGGCAGTTAGTATAGGG | 57.293 | 45.455 | 0.00 | 0.00 | 0.00 | 3.53 |
3451 | 4960 | 6.653273 | TCTCGACAATGAGACAAATTGATC | 57.347 | 37.500 | 0.00 | 0.00 | 40.01 | 2.92 |
3593 | 5104 | 5.521735 | GTCAACTTATGGACAGATAGCACAG | 59.478 | 44.000 | 0.00 | 0.00 | 34.22 | 3.66 |
3594 | 5105 | 5.046663 | TGTCAACTTATGGACAGATAGCACA | 60.047 | 40.000 | 0.00 | 0.00 | 39.00 | 4.57 |
3666 | 5177 | 3.870274 | TGATCCTTCTTCAGATGCACTG | 58.130 | 45.455 | 9.27 | 9.27 | 46.97 | 3.66 |
3667 | 5178 | 3.682155 | GCTGATCCTTCTTCAGATGCACT | 60.682 | 47.826 | 4.93 | 0.00 | 42.63 | 4.40 |
3668 | 5179 | 2.613133 | GCTGATCCTTCTTCAGATGCAC | 59.387 | 50.000 | 4.93 | 0.00 | 42.63 | 4.57 |
3669 | 5180 | 2.504585 | AGCTGATCCTTCTTCAGATGCA | 59.495 | 45.455 | 4.93 | 0.00 | 42.63 | 3.96 |
3670 | 5181 | 2.873472 | CAGCTGATCCTTCTTCAGATGC | 59.127 | 50.000 | 8.42 | 0.00 | 46.70 | 3.91 |
3672 | 5183 | 4.680172 | CGAACAGCTGATCCTTCTTCAGAT | 60.680 | 45.833 | 23.35 | 0.00 | 42.63 | 2.90 |
3673 | 5184 | 3.367806 | CGAACAGCTGATCCTTCTTCAGA | 60.368 | 47.826 | 23.35 | 0.00 | 42.63 | 3.27 |
3674 | 5185 | 2.928757 | CGAACAGCTGATCCTTCTTCAG | 59.071 | 50.000 | 23.35 | 4.83 | 42.83 | 3.02 |
3697 | 5208 | 7.336679 | CAGGAAACCACATAACATGACTGATAA | 59.663 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
3762 | 5291 | 1.317613 | TCCCACACTGTTGATTGCAC | 58.682 | 50.000 | 0.00 | 0.00 | 0.00 | 4.57 |
3929 | 5541 | 7.738345 | AGCAAATCATATTTTTACGTTTTGCC | 58.262 | 30.769 | 18.24 | 6.10 | 45.28 | 4.52 |
3936 | 5548 | 8.523464 | GCAGTGTTAGCAAATCATATTTTTACG | 58.477 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
3956 | 5568 | 6.472887 | AGTGTAAGTATTTGGTATGCAGTGT | 58.527 | 36.000 | 0.00 | 0.00 | 0.00 | 3.55 |
3961 | 5573 | 8.488651 | AACACTAGTGTAAGTATTTGGTATGC | 57.511 | 34.615 | 28.13 | 0.00 | 44.13 | 3.14 |
3962 | 5574 | 9.095065 | GGAACACTAGTGTAAGTATTTGGTATG | 57.905 | 37.037 | 28.13 | 0.00 | 44.13 | 2.39 |
3966 | 5578 | 6.092259 | GCTGGAACACTAGTGTAAGTATTTGG | 59.908 | 42.308 | 28.13 | 12.33 | 44.13 | 3.28 |
3967 | 5579 | 6.649141 | TGCTGGAACACTAGTGTAAGTATTTG | 59.351 | 38.462 | 28.13 | 13.65 | 44.13 | 2.32 |
3968 | 5580 | 6.765403 | TGCTGGAACACTAGTGTAAGTATTT | 58.235 | 36.000 | 28.13 | 11.32 | 44.13 | 1.40 |
4002 | 5614 | 9.702494 | GTCAGGTACACTAGTGTAAGTATTTTT | 57.298 | 33.333 | 32.02 | 12.25 | 46.33 | 1.94 |
4003 | 5615 | 8.863086 | TGTCAGGTACACTAGTGTAAGTATTTT | 58.137 | 33.333 | 32.02 | 13.13 | 46.33 | 1.82 |
4004 | 5616 | 8.413309 | TGTCAGGTACACTAGTGTAAGTATTT | 57.587 | 34.615 | 32.02 | 14.30 | 46.33 | 1.40 |
4062 | 5674 | 2.701107 | CATGAATGCATGCCCAAAACA | 58.299 | 42.857 | 16.68 | 7.34 | 44.76 | 2.83 |
4105 | 5717 | 2.989422 | ACCTGCAGCGTAAATTCAAC | 57.011 | 45.000 | 8.66 | 0.00 | 0.00 | 3.18 |
4116 | 5728 | 0.527565 | CAACCCATGTAACCTGCAGC | 59.472 | 55.000 | 8.66 | 0.00 | 0.00 | 5.25 |
4149 | 5761 | 1.154205 | GGTGCACGGAGGATTCATCG | 61.154 | 60.000 | 11.45 | 0.00 | 0.00 | 3.84 |
4230 | 5842 | 1.135139 | CAGTCATACTGGCGCTGTAGT | 59.865 | 52.381 | 7.64 | 12.29 | 42.35 | 2.73 |
4304 | 5916 | 3.626217 | AGCATGTCACATAGATGTTGCAG | 59.374 | 43.478 | 15.70 | 0.00 | 41.07 | 4.41 |
4320 | 5932 | 5.163519 | GGAAGCAATACCATACAAAGCATGT | 60.164 | 40.000 | 0.00 | 0.67 | 46.36 | 3.21 |
4330 | 5942 | 8.830915 | TTTAATTCCAAGGAAGCAATACCATA | 57.169 | 30.769 | 7.69 | 0.00 | 37.56 | 2.74 |
4643 | 6255 | 0.322546 | GTCCCATTCAGCTCGGGTTT | 60.323 | 55.000 | 6.87 | 0.00 | 41.12 | 3.27 |
4647 | 6259 | 0.533755 | GGATGTCCCATTCAGCTCGG | 60.534 | 60.000 | 0.00 | 0.00 | 34.14 | 4.63 |
4650 | 6262 | 2.158696 | GCTTAGGATGTCCCATTCAGCT | 60.159 | 50.000 | 0.00 | 0.00 | 37.41 | 4.24 |
4728 | 6340 | 1.681793 | GCCTTCAGTAGAGATACGGCA | 59.318 | 52.381 | 0.00 | 0.00 | 36.37 | 5.69 |
4871 | 6487 | 2.173782 | TGTTCCCAAGACTAAAGCACCA | 59.826 | 45.455 | 0.00 | 0.00 | 0.00 | 4.17 |
4935 | 6553 | 7.151999 | TCAGAGCACAGAAACAAGTTTTAAA | 57.848 | 32.000 | 0.00 | 0.00 | 32.11 | 1.52 |
4936 | 6554 | 6.751514 | TCAGAGCACAGAAACAAGTTTTAA | 57.248 | 33.333 | 0.00 | 0.00 | 32.11 | 1.52 |
5030 | 6657 | 2.213499 | CCCGCCTCTACATCATTTGAC | 58.787 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
5033 | 6660 | 0.179018 | GCCCCGCCTCTACATCATTT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 2.32 |
5048 | 6676 | 0.323451 | AAAAAGGAGGATCACGCCCC | 60.323 | 55.000 | 0.00 | 0.00 | 40.38 | 5.80 |
5143 | 6772 | 4.798574 | CAAGGCTGGTGAAAACATCTTAC | 58.201 | 43.478 | 0.00 | 0.00 | 0.00 | 2.34 |
5337 | 6968 | 9.964354 | TCCTCCAATAAATATATCTGACCATTG | 57.036 | 33.333 | 0.00 | 0.00 | 0.00 | 2.82 |
5382 | 7013 | 2.501881 | CGCGTTCCCAAGAAAATAACG | 58.498 | 47.619 | 0.00 | 0.00 | 44.18 | 3.18 |
5383 | 7014 | 2.247637 | GCGCGTTCCCAAGAAAATAAC | 58.752 | 47.619 | 8.43 | 0.00 | 32.58 | 1.89 |
5397 | 7028 | 1.523154 | ATGACACATTTGGGCGCGTT | 61.523 | 50.000 | 8.43 | 0.00 | 0.00 | 4.84 |
5402 | 7033 | 2.723124 | ACGAAATGACACATTTGGGC | 57.277 | 45.000 | 18.02 | 4.96 | 0.00 | 5.36 |
5419 | 7050 | 7.329717 | AGTCTCTTGCTGTTTTCTTCTATTACG | 59.670 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
5449 | 7080 | 7.913789 | ACACACATCCTAATTTACTTCCTACA | 58.086 | 34.615 | 0.00 | 0.00 | 0.00 | 2.74 |
5481 | 7112 | 6.902224 | ATTTGGTTTTGGAAAAGAACTTCG | 57.098 | 33.333 | 0.00 | 0.00 | 0.00 | 3.79 |
5484 | 7115 | 9.546428 | CATCTAATTTGGTTTTGGAAAAGAACT | 57.454 | 29.630 | 0.00 | 0.00 | 0.00 | 3.01 |
5485 | 7116 | 9.325198 | ACATCTAATTTGGTTTTGGAAAAGAAC | 57.675 | 29.630 | 0.00 | 0.00 | 0.00 | 3.01 |
5487 | 7118 | 7.440856 | GCACATCTAATTTGGTTTTGGAAAAGA | 59.559 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
5488 | 7119 | 7.442062 | AGCACATCTAATTTGGTTTTGGAAAAG | 59.558 | 33.333 | 0.00 | 0.00 | 0.00 | 2.27 |
5489 | 7120 | 7.278875 | AGCACATCTAATTTGGTTTTGGAAAA | 58.721 | 30.769 | 0.00 | 0.00 | 0.00 | 2.29 |
5490 | 7121 | 6.825610 | AGCACATCTAATTTGGTTTTGGAAA | 58.174 | 32.000 | 0.00 | 0.00 | 0.00 | 3.13 |
5491 | 7122 | 6.418057 | AGCACATCTAATTTGGTTTTGGAA | 57.582 | 33.333 | 0.00 | 0.00 | 0.00 | 3.53 |
5492 | 7123 | 6.418057 | AAGCACATCTAATTTGGTTTTGGA | 57.582 | 33.333 | 0.00 | 0.00 | 0.00 | 3.53 |
5493 | 7124 | 7.495135 | AAAAGCACATCTAATTTGGTTTTGG | 57.505 | 32.000 | 13.40 | 0.00 | 44.82 | 3.28 |
5494 | 7125 | 8.711457 | CCTAAAAGCACATCTAATTTGGTTTTG | 58.289 | 33.333 | 19.67 | 12.72 | 45.59 | 2.44 |
5495 | 7126 | 8.646900 | TCCTAAAAGCACATCTAATTTGGTTTT | 58.353 | 29.630 | 16.68 | 16.68 | 46.85 | 2.43 |
5512 | 7143 | 5.446073 | GCTTGACTACACGAATCCTAAAAGC | 60.446 | 44.000 | 0.00 | 0.00 | 0.00 | 3.51 |
5528 | 7159 | 7.452880 | AATTGCAGTAATTCAAGCTTGACTA | 57.547 | 32.000 | 28.46 | 18.92 | 33.79 | 2.59 |
5550 | 7182 | 5.294552 | GTCCTAAGCATCTAAAAGCACGAAT | 59.705 | 40.000 | 0.00 | 0.00 | 0.00 | 3.34 |
5553 | 7185 | 3.000322 | CGTCCTAAGCATCTAAAAGCACG | 60.000 | 47.826 | 0.00 | 0.00 | 0.00 | 5.34 |
5554 | 7186 | 3.309954 | CCGTCCTAAGCATCTAAAAGCAC | 59.690 | 47.826 | 0.00 | 0.00 | 0.00 | 4.40 |
5555 | 7187 | 3.196901 | TCCGTCCTAAGCATCTAAAAGCA | 59.803 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
5556 | 7188 | 3.793559 | TCCGTCCTAAGCATCTAAAAGC | 58.206 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
5557 | 7189 | 4.372656 | CCTCCGTCCTAAGCATCTAAAAG | 58.627 | 47.826 | 0.00 | 0.00 | 0.00 | 2.27 |
5558 | 7190 | 3.134081 | CCCTCCGTCCTAAGCATCTAAAA | 59.866 | 47.826 | 0.00 | 0.00 | 0.00 | 1.52 |
5559 | 7191 | 2.698797 | CCCTCCGTCCTAAGCATCTAAA | 59.301 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
5560 | 7192 | 2.091499 | TCCCTCCGTCCTAAGCATCTAA | 60.091 | 50.000 | 0.00 | 0.00 | 0.00 | 2.10 |
5561 | 7193 | 1.497716 | TCCCTCCGTCCTAAGCATCTA | 59.502 | 52.381 | 0.00 | 0.00 | 0.00 | 1.98 |
5563 | 7195 | 0.676736 | CTCCCTCCGTCCTAAGCATC | 59.323 | 60.000 | 0.00 | 0.00 | 0.00 | 3.91 |
5564 | 7196 | 0.032017 | ACTCCCTCCGTCCTAAGCAT | 60.032 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
5565 | 7197 | 0.627451 | TACTCCCTCCGTCCTAAGCA | 59.373 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
5566 | 7198 | 1.320507 | CTACTCCCTCCGTCCTAAGC | 58.679 | 60.000 | 0.00 | 0.00 | 0.00 | 3.09 |
5567 | 7199 | 2.732844 | ACTACTCCCTCCGTCCTAAG | 57.267 | 55.000 | 0.00 | 0.00 | 0.00 | 2.18 |
5568 | 7200 | 3.461085 | ACATACTACTCCCTCCGTCCTAA | 59.539 | 47.826 | 0.00 | 0.00 | 0.00 | 2.69 |
5569 | 7201 | 3.051581 | ACATACTACTCCCTCCGTCCTA | 58.948 | 50.000 | 0.00 | 0.00 | 0.00 | 2.94 |
5571 | 7203 | 2.361643 | ACATACTACTCCCTCCGTCC | 57.638 | 55.000 | 0.00 | 0.00 | 0.00 | 4.79 |
5572 | 7204 | 5.068636 | TGATAACATACTACTCCCTCCGTC | 58.931 | 45.833 | 0.00 | 0.00 | 0.00 | 4.79 |
5573 | 7205 | 5.057843 | TGATAACATACTACTCCCTCCGT | 57.942 | 43.478 | 0.00 | 0.00 | 0.00 | 4.69 |
5574 | 7206 | 6.390721 | CATTGATAACATACTACTCCCTCCG | 58.609 | 44.000 | 0.00 | 0.00 | 0.00 | 4.63 |
5575 | 7207 | 6.497259 | TCCATTGATAACATACTACTCCCTCC | 59.503 | 42.308 | 0.00 | 0.00 | 0.00 | 4.30 |
5576 | 7208 | 7.540474 | TCCATTGATAACATACTACTCCCTC | 57.460 | 40.000 | 0.00 | 0.00 | 0.00 | 4.30 |
5577 | 7209 | 7.569111 | ACTTCCATTGATAACATACTACTCCCT | 59.431 | 37.037 | 0.00 | 0.00 | 0.00 | 4.20 |
5578 | 7210 | 7.657761 | CACTTCCATTGATAACATACTACTCCC | 59.342 | 40.741 | 0.00 | 0.00 | 0.00 | 4.30 |
5579 | 7211 | 7.171678 | GCACTTCCATTGATAACATACTACTCC | 59.828 | 40.741 | 0.00 | 0.00 | 0.00 | 3.85 |
5580 | 7212 | 7.928706 | AGCACTTCCATTGATAACATACTACTC | 59.071 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
5581 | 7213 | 7.796054 | AGCACTTCCATTGATAACATACTACT | 58.204 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
5582 | 7214 | 7.096023 | CGAGCACTTCCATTGATAACATACTAC | 60.096 | 40.741 | 0.00 | 0.00 | 0.00 | 2.73 |
5621 | 7253 | 5.237127 | TCGAGCCTTGCTGTTTTCATATATG | 59.763 | 40.000 | 6.36 | 6.36 | 39.88 | 1.78 |
5623 | 7255 | 4.765273 | TCGAGCCTTGCTGTTTTCATATA | 58.235 | 39.130 | 0.00 | 0.00 | 39.88 | 0.86 |
5626 | 7258 | 1.808945 | CTCGAGCCTTGCTGTTTTCAT | 59.191 | 47.619 | 0.00 | 0.00 | 39.88 | 2.57 |
5627 | 7259 | 1.202639 | TCTCGAGCCTTGCTGTTTTCA | 60.203 | 47.619 | 7.81 | 0.00 | 39.88 | 2.69 |
5628 | 7260 | 1.512926 | TCTCGAGCCTTGCTGTTTTC | 58.487 | 50.000 | 7.81 | 0.00 | 39.88 | 2.29 |
5631 | 7263 | 0.610174 | TGATCTCGAGCCTTGCTGTT | 59.390 | 50.000 | 7.81 | 0.00 | 39.88 | 3.16 |
5632 | 7264 | 0.610174 | TTGATCTCGAGCCTTGCTGT | 59.390 | 50.000 | 7.81 | 0.00 | 39.88 | 4.40 |
5634 | 7266 | 2.286872 | CATTTGATCTCGAGCCTTGCT | 58.713 | 47.619 | 7.81 | 0.00 | 43.88 | 3.91 |
5635 | 7267 | 2.012673 | ACATTTGATCTCGAGCCTTGC | 58.987 | 47.619 | 7.81 | 0.00 | 0.00 | 4.01 |
5636 | 7268 | 4.691860 | AAACATTTGATCTCGAGCCTTG | 57.308 | 40.909 | 7.81 | 2.12 | 0.00 | 3.61 |
5637 | 7269 | 5.712152 | AAAAACATTTGATCTCGAGCCTT | 57.288 | 34.783 | 7.81 | 0.00 | 0.00 | 4.35 |
5686 | 7373 | 8.986477 | AAAACCTTGCTGTTTTCATATATGTC | 57.014 | 30.769 | 12.42 | 3.55 | 43.09 | 3.06 |
5785 | 7477 | 6.500684 | TGAGGTTTTCTGTCAATTAGATGC | 57.499 | 37.500 | 0.00 | 0.00 | 0.00 | 3.91 |
5796 | 7492 | 3.541632 | ACAACACGATGAGGTTTTCTGT | 58.458 | 40.909 | 0.00 | 0.00 | 0.00 | 3.41 |
5823 | 7519 | 5.902613 | TTAACATCCTGAAGCCAGAAATG | 57.097 | 39.130 | 0.00 | 0.00 | 43.02 | 2.32 |
5824 | 7520 | 5.297776 | CGATTAACATCCTGAAGCCAGAAAT | 59.702 | 40.000 | 0.00 | 0.00 | 43.02 | 2.17 |
5848 | 7544 | 1.203287 | GGCCAGGAAGAAATCAAGCAC | 59.797 | 52.381 | 0.00 | 0.00 | 0.00 | 4.40 |
5866 | 7577 | 4.022242 | GGTTGAGGTAAGAAAAAGGAAGGC | 60.022 | 45.833 | 0.00 | 0.00 | 0.00 | 4.35 |
5904 | 7623 | 0.039035 | GTTTGGGGCCTGTCCATGTA | 59.961 | 55.000 | 0.84 | 0.00 | 36.21 | 2.29 |
5929 | 7649 | 0.035725 | TCAGAATGCTGCTGTCCTGG | 60.036 | 55.000 | 0.00 | 0.00 | 42.01 | 4.45 |
5978 | 7698 | 1.165270 | GTGTACACCACCATTGAGCC | 58.835 | 55.000 | 15.42 | 0.00 | 38.18 | 4.70 |
6097 | 7817 | 1.375908 | GTCGCCAGACATGCTTGGA | 60.376 | 57.895 | 17.74 | 0.00 | 46.32 | 3.53 |
6292 | 8012 | 0.251430 | TAGGCCAAAAAGGTTCCCCG | 60.251 | 55.000 | 5.01 | 0.00 | 40.61 | 5.73 |
6340 | 8060 | 2.662156 | GCGGTTCGTTCTTGACTCTTAG | 59.338 | 50.000 | 0.00 | 0.00 | 0.00 | 2.18 |
6342 | 8062 | 1.499049 | GCGGTTCGTTCTTGACTCTT | 58.501 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
6343 | 8063 | 0.663568 | CGCGGTTCGTTCTTGACTCT | 60.664 | 55.000 | 0.00 | 0.00 | 0.00 | 3.24 |
6447 | 8200 | 2.040012 | TCCAAAATGCAAATGCCATGGT | 59.960 | 40.909 | 14.67 | 0.00 | 41.18 | 3.55 |
6453 | 8206 | 3.391965 | TGTCTGTCCAAAATGCAAATGC | 58.608 | 40.909 | 0.00 | 0.00 | 42.50 | 3.56 |
6557 | 8310 | 3.825328 | AGCATCACATCTTGTTATCCCC | 58.175 | 45.455 | 0.00 | 0.00 | 0.00 | 4.81 |
6559 | 8312 | 6.094603 | ACAGAAAGCATCACATCTTGTTATCC | 59.905 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
6560 | 8313 | 7.081526 | ACAGAAAGCATCACATCTTGTTATC | 57.918 | 36.000 | 0.00 | 0.00 | 0.00 | 1.75 |
6564 | 8317 | 4.940046 | CCTACAGAAAGCATCACATCTTGT | 59.060 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
6605 | 8358 | 2.023673 | ACATATGGCCAACGGAACATG | 58.976 | 47.619 | 10.96 | 7.43 | 0.00 | 3.21 |
6695 | 8450 | 9.522804 | GACAAAACAACATTACAAAGGTGATTA | 57.477 | 29.630 | 0.00 | 0.00 | 0.00 | 1.75 |
6701 | 8456 | 7.769272 | ACATGACAAAACAACATTACAAAGG | 57.231 | 32.000 | 0.00 | 0.00 | 0.00 | 3.11 |
6708 | 8463 | 5.278266 | CGGGAGTACATGACAAAACAACATT | 60.278 | 40.000 | 0.00 | 0.00 | 0.00 | 2.71 |
6714 | 8469 | 1.467342 | GGCGGGAGTACATGACAAAAC | 59.533 | 52.381 | 0.00 | 0.00 | 0.00 | 2.43 |
6716 | 8471 | 0.390603 | CGGCGGGAGTACATGACAAA | 60.391 | 55.000 | 0.00 | 0.00 | 0.00 | 2.83 |
6732 | 8494 | 1.902504 | CGACGCTTATTTTGAAACGGC | 59.097 | 47.619 | 0.00 | 0.00 | 0.00 | 5.68 |
6748 | 8510 | 2.936050 | GTGGAACTAAAACCACGACG | 57.064 | 50.000 | 0.00 | 0.00 | 45.16 | 5.12 |
6768 | 8530 | 2.742053 | CCTACGTCCCAAAATGAGTGTG | 59.258 | 50.000 | 0.00 | 0.00 | 0.00 | 3.82 |
6782 | 8559 | 0.601558 | TGACTGTTGCTCCCTACGTC | 59.398 | 55.000 | 0.00 | 0.00 | 0.00 | 4.34 |
6793 | 8570 | 0.599558 | CCCTTGCACCATGACTGTTG | 59.400 | 55.000 | 0.00 | 0.00 | 0.00 | 3.33 |
6809 | 8592 | 0.179004 | TGTTCACATTTCCGTGCCCT | 60.179 | 50.000 | 0.00 | 0.00 | 36.80 | 5.19 |
6816 | 8599 | 5.215160 | CAGCTACTTTGTGTTCACATTTCC | 58.785 | 41.667 | 6.47 | 0.00 | 0.00 | 3.13 |
6869 | 8652 | 4.104696 | TGTTCATGATGCATTTGAGCTG | 57.895 | 40.909 | 20.27 | 6.79 | 34.99 | 4.24 |
6878 | 8661 | 7.725818 | TTTTTATTTTGCTGTTCATGATGCA | 57.274 | 28.000 | 12.52 | 12.52 | 0.00 | 3.96 |
6931 | 8718 | 7.856145 | ATTCAGTAATGTTTGTTGCCAAAAA | 57.144 | 28.000 | 0.00 | 0.00 | 41.99 | 1.94 |
6936 | 8723 | 7.566709 | CAGAAAATTCAGTAATGTTTGTTGCC | 58.433 | 34.615 | 0.00 | 0.00 | 0.00 | 4.52 |
7005 | 8792 | 3.376540 | TCGATTTTGTTTCTTTTGCCCG | 58.623 | 40.909 | 0.00 | 0.00 | 0.00 | 6.13 |
7040 | 8828 | 8.729805 | ACACTCCAAAATGCTTTCAAAAATAA | 57.270 | 26.923 | 0.00 | 0.00 | 0.00 | 1.40 |
7083 | 8871 | 1.608717 | GCATCTGTGGAGGTCTCGGT | 61.609 | 60.000 | 0.00 | 0.00 | 0.00 | 4.69 |
7084 | 8872 | 1.142748 | GCATCTGTGGAGGTCTCGG | 59.857 | 63.158 | 0.00 | 0.00 | 0.00 | 4.63 |
7086 | 8874 | 2.706339 | ATTGCATCTGTGGAGGTCTC | 57.294 | 50.000 | 0.00 | 0.00 | 0.00 | 3.36 |
7103 | 8891 | 2.859538 | CTGCGTGCAAACTGTTGAAATT | 59.140 | 40.909 | 0.00 | 0.00 | 36.83 | 1.82 |
7110 | 8898 | 2.828095 | TGCCTGCGTGCAAACTGT | 60.828 | 55.556 | 0.00 | 0.00 | 38.56 | 3.55 |
7113 | 8901 | 1.065600 | TTTCTGCCTGCGTGCAAAC | 59.934 | 52.632 | 1.43 | 0.00 | 41.51 | 2.93 |
7114 | 8902 | 1.065600 | GTTTCTGCCTGCGTGCAAA | 59.934 | 52.632 | 1.43 | 0.00 | 41.51 | 3.68 |
7115 | 8903 | 2.721231 | GTTTCTGCCTGCGTGCAA | 59.279 | 55.556 | 1.43 | 0.00 | 41.51 | 4.08 |
7116 | 8904 | 3.286751 | GGTTTCTGCCTGCGTGCA | 61.287 | 61.111 | 0.00 | 0.00 | 39.37 | 4.57 |
7117 | 8905 | 4.043200 | GGGTTTCTGCCTGCGTGC | 62.043 | 66.667 | 0.00 | 0.00 | 0.00 | 5.34 |
7118 | 8906 | 1.973281 | ATGGGTTTCTGCCTGCGTG | 60.973 | 57.895 | 0.00 | 0.00 | 0.00 | 5.34 |
7119 | 8907 | 1.973281 | CATGGGTTTCTGCCTGCGT | 60.973 | 57.895 | 0.00 | 0.00 | 0.00 | 5.24 |
7120 | 8908 | 2.879907 | CATGGGTTTCTGCCTGCG | 59.120 | 61.111 | 0.00 | 0.00 | 0.00 | 5.18 |
7121 | 8909 | 1.818959 | TTGCATGGGTTTCTGCCTGC | 61.819 | 55.000 | 0.00 | 0.00 | 37.59 | 4.85 |
7205 | 9002 | 2.035530 | AGCTCAAATGCTCTGGCTAC | 57.964 | 50.000 | 0.00 | 0.00 | 39.34 | 3.58 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.