Multiple sequence alignment - TraesCS2D01G395300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G395300 chr2D 100.000 1774 0 0 855 2628 506652234 506650461 0.000000e+00 3277.0
1 TraesCS2D01G395300 chr2D 89.837 797 60 17 1033 1816 506758919 506758131 0.000000e+00 1003.0
2 TraesCS2D01G395300 chr2D 82.759 957 90 42 855 1755 506524948 506524011 0.000000e+00 784.0
3 TraesCS2D01G395300 chr2D 100.000 320 0 0 1 320 506653088 506652769 2.250000e-165 592.0
4 TraesCS2D01G395300 chr2D 90.741 54 4 1 194 246 620513510 620513563 1.300000e-08 71.3
5 TraesCS2D01G395300 chr2D 84.211 76 7 3 194 265 206242485 206242411 4.690000e-08 69.4
6 TraesCS2D01G395300 chr2B 89.683 1105 63 23 855 1915 594261773 594260676 0.000000e+00 1362.0
7 TraesCS2D01G395300 chr2B 89.061 905 71 18 871 1755 594684163 594683267 0.000000e+00 1098.0
8 TraesCS2D01G395300 chr2B 81.497 962 103 36 855 1755 594205762 594204815 0.000000e+00 721.0
9 TraesCS2D01G395300 chr2B 94.792 96 4 1 2113 2207 594259084 594258989 5.860000e-32 148.0
10 TraesCS2D01G395300 chr2B 90.000 100 10 0 2496 2595 107567268 107567367 2.120000e-26 130.0
11 TraesCS2D01G395300 chr2B 95.556 45 2 0 187 231 789514417 789514461 3.630000e-09 73.1
12 TraesCS2D01G395300 chr2B 96.970 33 0 1 2597 2628 710833144 710833112 1.000000e-03 54.7
13 TraesCS2D01G395300 chr2A 87.230 1159 75 28 855 1969 651505738 651504609 0.000000e+00 1253.0
14 TraesCS2D01G395300 chr2A 90.692 795 58 13 1033 1814 651510485 651509694 0.000000e+00 1044.0
15 TraesCS2D01G395300 chr2A 83.138 854 80 34 962 1755 651396484 651395635 0.000000e+00 721.0
16 TraesCS2D01G395300 chr2A 83.021 854 81 35 962 1755 651445154 651444305 0.000000e+00 715.0
17 TraesCS2D01G395300 chr2A 91.034 290 17 7 2149 2429 651504553 651504264 1.480000e-102 383.0
18 TraesCS2D01G395300 chrUn 83.021 854 81 35 962 1755 323408559 323409408 0.000000e+00 715.0
19 TraesCS2D01G395300 chr3D 89.524 105 9 2 2495 2598 427460290 427460187 5.900000e-27 132.0
20 TraesCS2D01G395300 chr3D 87.156 109 13 1 2496 2603 362044301 362044193 3.550000e-24 122.0
21 TraesCS2D01G395300 chr5B 88.462 104 11 1 2496 2598 689201357 689201460 9.880000e-25 124.0
22 TraesCS2D01G395300 chr5B 87.619 105 12 1 2496 2599 657599056 657599160 1.280000e-23 121.0
23 TraesCS2D01G395300 chr5B 84.259 108 13 2 194 298 536909461 536909355 4.630000e-18 102.0
24 TraesCS2D01G395300 chr1D 87.273 110 12 2 2496 2603 217139854 217139745 9.880000e-25 124.0
25 TraesCS2D01G395300 chr1D 100.000 29 0 0 2600 2628 61940805 61940833 1.000000e-03 54.7
26 TraesCS2D01G395300 chr1D 100.000 29 0 0 2600 2628 76981708 76981680 1.000000e-03 54.7
27 TraesCS2D01G395300 chr3B 87.156 109 13 1 2496 2603 21861195 21861303 3.550000e-24 122.0
28 TraesCS2D01G395300 chr3B 89.831 59 5 1 237 295 510054712 510054769 1.010000e-09 75.0
29 TraesCS2D01G395300 chr3B 87.097 62 7 1 237 298 773632972 773632912 4.690000e-08 69.4
30 TraesCS2D01G395300 chr1B 87.736 106 12 1 2495 2599 594063143 594063248 3.550000e-24 122.0
31 TraesCS2D01G395300 chr7D 87.619 105 12 1 2496 2599 147196047 147195943 1.280000e-23 121.0
32 TraesCS2D01G395300 chr7D 82.353 119 19 1 72 190 605167137 605167021 4.630000e-18 102.0
33 TraesCS2D01G395300 chr7D 86.441 59 7 1 237 295 579715159 579715216 2.180000e-06 63.9
34 TraesCS2D01G395300 chr7D 100.000 28 0 0 291 318 496367689 496367716 5.000000e-03 52.8
35 TraesCS2D01G395300 chr4B 80.172 116 9 4 193 295 43104011 43104125 1.010000e-09 75.0
36 TraesCS2D01G395300 chr4B 80.198 101 18 2 200 299 627538919 627538820 1.010000e-09 75.0
37 TraesCS2D01G395300 chr4B 100.000 29 0 0 2600 2628 4990450 4990422 1.000000e-03 54.7
38 TraesCS2D01G395300 chr4B 100.000 29 0 0 2600 2628 67921771 67921799 1.000000e-03 54.7
39 TraesCS2D01G395300 chr4B 100.000 29 0 0 2600 2628 568708358 568708330 1.000000e-03 54.7
40 TraesCS2D01G395300 chr7A 79.310 116 12 6 191 295 135699229 135699343 1.300000e-08 71.3
41 TraesCS2D01G395300 chr7A 97.368 38 1 0 194 231 254846747 254846710 6.070000e-07 65.8
42 TraesCS2D01G395300 chr5D 90.566 53 5 0 190 242 482597059 482597111 1.300000e-08 71.3
43 TraesCS2D01G395300 chr7B 88.136 59 6 1 194 251 26689123 26689065 4.690000e-08 69.4
44 TraesCS2D01G395300 chr7B 83.117 77 9 2 192 265 77391666 77391741 1.690000e-07 67.6
45 TraesCS2D01G395300 chr4D 87.719 57 6 1 239 295 8195518 8195573 6.070000e-07 65.8
46 TraesCS2D01G395300 chr4D 100.000 29 0 0 2600 2628 220903732 220903704 1.000000e-03 54.7
47 TraesCS2D01G395300 chr1A 85.484 62 8 1 237 298 49524871 49524811 2.180000e-06 63.9
48 TraesCS2D01G395300 chr1A 100.000 29 0 0 2600 2628 37465613 37465585 1.000000e-03 54.7
49 TraesCS2D01G395300 chr1A 100.000 29 0 0 2600 2628 49994712 49994684 1.000000e-03 54.7
50 TraesCS2D01G395300 chr1A 100.000 29 0 0 291 319 115565688 115565716 1.000000e-03 54.7
51 TraesCS2D01G395300 chr6B 100.000 29 0 0 291 319 659617166 659617194 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G395300 chr2D 506650461 506653088 2627 True 1934.500000 3277 100.0000 1 2628 2 chr2D.!!$R4 2627
1 TraesCS2D01G395300 chr2D 506758131 506758919 788 True 1003.000000 1003 89.8370 1033 1816 1 chr2D.!!$R3 783
2 TraesCS2D01G395300 chr2D 506524011 506524948 937 True 784.000000 784 82.7590 855 1755 1 chr2D.!!$R2 900
3 TraesCS2D01G395300 chr2B 594683267 594684163 896 True 1098.000000 1098 89.0610 871 1755 1 chr2B.!!$R2 884
4 TraesCS2D01G395300 chr2B 594258989 594261773 2784 True 755.000000 1362 92.2375 855 2207 2 chr2B.!!$R4 1352
5 TraesCS2D01G395300 chr2B 594204815 594205762 947 True 721.000000 721 81.4970 855 1755 1 chr2B.!!$R1 900
6 TraesCS2D01G395300 chr2A 651504264 651510485 6221 True 893.333333 1253 89.6520 855 2429 3 chr2A.!!$R3 1574
7 TraesCS2D01G395300 chr2A 651395635 651396484 849 True 721.000000 721 83.1380 962 1755 1 chr2A.!!$R1 793
8 TraesCS2D01G395300 chr2A 651444305 651445154 849 True 715.000000 715 83.0210 962 1755 1 chr2A.!!$R2 793
9 TraesCS2D01G395300 chrUn 323408559 323409408 849 False 715.000000 715 83.0210 962 1755 1 chrUn.!!$F1 793

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
310 311 0.339162 TGTACTCCCCCGTCCCATAA 59.661 55.0 0.0 0.0 0.0 1.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1944 7013 0.03601 ATCTTGTCGAACCTGCCCAG 60.036 55.0 0.0 0.0 0.0 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.183300 GTGAGGCGGTGCGTGATA 59.817 61.111 0.00 0.00 0.00 2.15
19 20 1.878522 GTGAGGCGGTGCGTGATAG 60.879 63.158 0.00 0.00 0.00 2.08
20 21 2.962253 GAGGCGGTGCGTGATAGC 60.962 66.667 0.00 0.00 37.71 2.97
21 22 4.873129 AGGCGGTGCGTGATAGCG 62.873 66.667 0.00 0.00 40.67 4.26
22 23 4.865761 GGCGGTGCGTGATAGCGA 62.866 66.667 0.00 0.00 41.14 4.93
23 24 3.617538 GCGGTGCGTGATAGCGAC 61.618 66.667 0.00 0.00 41.14 5.19
24 25 2.954868 CGGTGCGTGATAGCGACC 60.955 66.667 0.00 0.00 41.14 4.79
25 26 2.954868 GGTGCGTGATAGCGACCG 60.955 66.667 0.00 0.00 40.67 4.79
26 27 2.202570 GTGCGTGATAGCGACCGT 60.203 61.111 0.00 0.00 40.67 4.83
27 28 2.101575 TGCGTGATAGCGACCGTC 59.898 61.111 0.00 0.00 40.67 4.79
28 29 3.017314 GCGTGATAGCGACCGTCG 61.017 66.667 16.72 16.72 43.89 5.12
29 30 2.352001 CGTGATAGCGACCGTCGG 60.352 66.667 21.84 10.48 40.84 4.79
30 31 2.654404 GTGATAGCGACCGTCGGC 60.654 66.667 21.84 13.87 40.84 5.54
31 32 3.896133 TGATAGCGACCGTCGGCC 61.896 66.667 21.84 0.00 40.84 6.13
32 33 3.896133 GATAGCGACCGTCGGCCA 61.896 66.667 21.84 4.71 40.84 5.36
33 34 4.203076 ATAGCGACCGTCGGCCAC 62.203 66.667 21.84 5.67 40.84 5.01
44 45 4.838152 CGGCCACGGGTGATGGAG 62.838 72.222 2.24 0.00 39.87 3.86
45 46 3.399181 GGCCACGGGTGATGGAGA 61.399 66.667 0.00 0.00 39.87 3.71
46 47 2.125106 GCCACGGGTGATGGAGAC 60.125 66.667 0.00 0.00 39.87 3.36
47 48 2.660064 GCCACGGGTGATGGAGACT 61.660 63.158 0.00 0.00 39.87 3.24
48 49 1.219124 CCACGGGTGATGGAGACTG 59.781 63.158 0.00 0.00 39.87 3.51
49 50 1.219124 CACGGGTGATGGAGACTGG 59.781 63.158 0.00 0.00 0.00 4.00
50 51 2.187946 CGGGTGATGGAGACTGGC 59.812 66.667 0.00 0.00 0.00 4.85
51 52 2.187946 GGGTGATGGAGACTGGCG 59.812 66.667 0.00 0.00 0.00 5.69
52 53 2.187946 GGTGATGGAGACTGGCGG 59.812 66.667 0.00 0.00 0.00 6.13
53 54 2.660064 GGTGATGGAGACTGGCGGT 61.660 63.158 0.00 0.00 0.00 5.68
54 55 1.296715 GTGATGGAGACTGGCGGTT 59.703 57.895 0.00 0.00 0.00 4.44
55 56 0.535335 GTGATGGAGACTGGCGGTTA 59.465 55.000 0.00 0.00 0.00 2.85
56 57 1.139058 GTGATGGAGACTGGCGGTTAT 59.861 52.381 0.00 0.00 0.00 1.89
57 58 1.138859 TGATGGAGACTGGCGGTTATG 59.861 52.381 0.00 0.00 0.00 1.90
58 59 0.469917 ATGGAGACTGGCGGTTATGG 59.530 55.000 0.00 0.00 0.00 2.74
59 60 1.523938 GGAGACTGGCGGTTATGGC 60.524 63.158 0.00 0.00 0.00 4.40
60 61 1.883084 GAGACTGGCGGTTATGGCG 60.883 63.158 0.00 0.00 37.19 5.69
61 62 2.895372 GACTGGCGGTTATGGCGG 60.895 66.667 0.00 0.00 45.69 6.13
62 63 4.483243 ACTGGCGGTTATGGCGGG 62.483 66.667 0.00 0.00 44.58 6.13
65 66 3.864186 GGCGGTTATGGCGGGGTA 61.864 66.667 0.00 0.00 0.00 3.69
66 67 2.280592 GCGGTTATGGCGGGGTAG 60.281 66.667 0.00 0.00 0.00 3.18
67 68 2.424302 CGGTTATGGCGGGGTAGG 59.576 66.667 0.00 0.00 0.00 3.18
68 69 2.112507 GGTTATGGCGGGGTAGGC 59.887 66.667 0.00 0.00 37.19 3.93
73 74 2.931105 TGGCGGGGTAGGCAAGAA 60.931 61.111 0.00 0.00 43.90 2.52
74 75 2.124695 GGCGGGGTAGGCAAGAAG 60.125 66.667 0.00 0.00 36.61 2.85
75 76 2.666098 GGCGGGGTAGGCAAGAAGA 61.666 63.158 0.00 0.00 36.61 2.87
76 77 1.527370 GCGGGGTAGGCAAGAAGAT 59.473 57.895 0.00 0.00 0.00 2.40
77 78 0.815615 GCGGGGTAGGCAAGAAGATG 60.816 60.000 0.00 0.00 0.00 2.90
78 79 0.830648 CGGGGTAGGCAAGAAGATGA 59.169 55.000 0.00 0.00 0.00 2.92
79 80 1.417890 CGGGGTAGGCAAGAAGATGAT 59.582 52.381 0.00 0.00 0.00 2.45
80 81 2.808202 CGGGGTAGGCAAGAAGATGATG 60.808 54.545 0.00 0.00 0.00 3.07
81 82 2.439507 GGGGTAGGCAAGAAGATGATGA 59.560 50.000 0.00 0.00 0.00 2.92
82 83 3.117888 GGGGTAGGCAAGAAGATGATGAA 60.118 47.826 0.00 0.00 0.00 2.57
83 84 3.879892 GGGTAGGCAAGAAGATGATGAAC 59.120 47.826 0.00 0.00 0.00 3.18
84 85 4.517285 GGTAGGCAAGAAGATGATGAACA 58.483 43.478 0.00 0.00 0.00 3.18
85 86 4.574013 GGTAGGCAAGAAGATGATGAACAG 59.426 45.833 0.00 0.00 0.00 3.16
86 87 4.298103 AGGCAAGAAGATGATGAACAGT 57.702 40.909 0.00 0.00 0.00 3.55
87 88 5.426689 AGGCAAGAAGATGATGAACAGTA 57.573 39.130 0.00 0.00 0.00 2.74
88 89 5.426504 AGGCAAGAAGATGATGAACAGTAG 58.573 41.667 0.00 0.00 0.00 2.57
89 90 4.034975 GGCAAGAAGATGATGAACAGTAGC 59.965 45.833 0.00 0.00 0.00 3.58
90 91 4.633126 GCAAGAAGATGATGAACAGTAGCA 59.367 41.667 0.00 0.00 0.00 3.49
91 92 5.447010 GCAAGAAGATGATGAACAGTAGCAC 60.447 44.000 0.00 0.00 0.00 4.40
92 93 4.428209 AGAAGATGATGAACAGTAGCACG 58.572 43.478 0.00 0.00 0.00 5.34
93 94 4.158579 AGAAGATGATGAACAGTAGCACGA 59.841 41.667 0.00 0.00 0.00 4.35
94 95 4.662468 AGATGATGAACAGTAGCACGAT 57.338 40.909 0.00 0.00 0.00 3.73
95 96 4.615949 AGATGATGAACAGTAGCACGATC 58.384 43.478 0.00 0.00 0.00 3.69
96 97 4.340666 AGATGATGAACAGTAGCACGATCT 59.659 41.667 0.00 0.00 0.00 2.75
97 98 5.532779 AGATGATGAACAGTAGCACGATCTA 59.467 40.000 0.00 0.00 0.00 1.98
98 99 5.774498 TGATGAACAGTAGCACGATCTAT 57.226 39.130 0.00 0.00 0.00 1.98
99 100 6.149129 TGATGAACAGTAGCACGATCTATT 57.851 37.500 0.00 0.00 0.00 1.73
100 101 6.573434 TGATGAACAGTAGCACGATCTATTT 58.427 36.000 0.00 0.00 0.00 1.40
101 102 7.041721 TGATGAACAGTAGCACGATCTATTTT 58.958 34.615 0.00 0.00 0.00 1.82
102 103 6.647212 TGAACAGTAGCACGATCTATTTTG 57.353 37.500 0.00 0.00 0.00 2.44
103 104 5.580691 TGAACAGTAGCACGATCTATTTTGG 59.419 40.000 0.00 0.00 0.00 3.28
104 105 4.442706 ACAGTAGCACGATCTATTTTGGG 58.557 43.478 0.00 0.00 0.00 4.12
105 106 3.248602 CAGTAGCACGATCTATTTTGGGC 59.751 47.826 0.00 0.00 0.00 5.36
106 107 1.680338 AGCACGATCTATTTTGGGCC 58.320 50.000 0.00 0.00 0.00 5.80
107 108 1.064758 AGCACGATCTATTTTGGGCCA 60.065 47.619 0.00 0.00 0.00 5.36
108 109 1.065551 GCACGATCTATTTTGGGCCAC 59.934 52.381 5.23 0.00 0.00 5.01
109 110 2.643551 CACGATCTATTTTGGGCCACT 58.356 47.619 5.23 0.00 0.00 4.00
110 111 2.355756 CACGATCTATTTTGGGCCACTG 59.644 50.000 5.23 0.00 0.00 3.66
111 112 1.949525 CGATCTATTTTGGGCCACTGG 59.050 52.381 5.23 0.00 0.00 4.00
112 113 2.421388 CGATCTATTTTGGGCCACTGGA 60.421 50.000 5.23 1.60 0.00 3.86
113 114 3.748668 CGATCTATTTTGGGCCACTGGAT 60.749 47.826 5.23 7.13 0.00 3.41
114 115 3.297134 TCTATTTTGGGCCACTGGATC 57.703 47.619 5.23 0.00 0.00 3.36
115 116 2.580322 TCTATTTTGGGCCACTGGATCA 59.420 45.455 5.23 0.00 0.00 2.92
116 117 2.323999 ATTTTGGGCCACTGGATCAA 57.676 45.000 5.23 0.00 0.00 2.57
117 118 1.631405 TTTTGGGCCACTGGATCAAG 58.369 50.000 5.23 0.00 0.00 3.02
118 119 0.776810 TTTGGGCCACTGGATCAAGA 59.223 50.000 5.23 0.00 0.00 3.02
119 120 1.002069 TTGGGCCACTGGATCAAGAT 58.998 50.000 5.23 0.00 0.00 2.40
120 121 1.002069 TGGGCCACTGGATCAAGATT 58.998 50.000 0.00 0.00 0.00 2.40
121 122 1.358787 TGGGCCACTGGATCAAGATTT 59.641 47.619 0.00 0.00 0.00 2.17
122 123 1.753073 GGGCCACTGGATCAAGATTTG 59.247 52.381 4.39 0.00 0.00 2.32
123 124 2.621407 GGGCCACTGGATCAAGATTTGA 60.621 50.000 4.39 0.00 45.01 2.69
124 125 2.424956 GGCCACTGGATCAAGATTTGAC 59.575 50.000 3.42 0.00 43.48 3.18
125 126 3.084039 GCCACTGGATCAAGATTTGACA 58.916 45.455 3.42 0.00 43.48 3.58
126 127 3.507233 GCCACTGGATCAAGATTTGACAA 59.493 43.478 3.42 0.00 43.48 3.18
127 128 4.159135 GCCACTGGATCAAGATTTGACAAT 59.841 41.667 3.42 0.00 43.48 2.71
128 129 5.337009 GCCACTGGATCAAGATTTGACAATT 60.337 40.000 3.42 0.00 43.48 2.32
129 130 6.694447 CCACTGGATCAAGATTTGACAATTT 58.306 36.000 3.42 0.00 43.48 1.82
130 131 7.156673 CCACTGGATCAAGATTTGACAATTTT 58.843 34.615 3.42 0.00 43.48 1.82
131 132 7.330208 CCACTGGATCAAGATTTGACAATTTTC 59.670 37.037 3.42 0.00 43.48 2.29
132 133 7.061441 CACTGGATCAAGATTTGACAATTTTCG 59.939 37.037 3.42 0.00 43.48 3.46
133 134 6.980593 TGGATCAAGATTTGACAATTTTCGT 58.019 32.000 0.00 0.00 43.48 3.85
134 135 8.105097 TGGATCAAGATTTGACAATTTTCGTA 57.895 30.769 0.00 0.00 43.48 3.43
135 136 8.739039 TGGATCAAGATTTGACAATTTTCGTAT 58.261 29.630 0.00 0.00 43.48 3.06
145 146 9.522804 TTTGACAATTTTCGTATAAAAAGCAGT 57.477 25.926 0.00 0.00 32.04 4.40
146 147 9.522804 TTGACAATTTTCGTATAAAAAGCAGTT 57.477 25.926 0.00 0.00 32.04 3.16
147 148 8.963130 TGACAATTTTCGTATAAAAAGCAGTTG 58.037 29.630 0.00 0.00 32.04 3.16
148 149 9.176181 GACAATTTTCGTATAAAAAGCAGTTGA 57.824 29.630 0.00 0.00 32.04 3.18
149 150 9.691362 ACAATTTTCGTATAAAAAGCAGTTGAT 57.309 25.926 0.00 0.00 32.04 2.57
150 151 9.941991 CAATTTTCGTATAAAAAGCAGTTGATG 57.058 29.630 0.00 0.00 32.04 3.07
182 183 3.458872 CAGGCGCCTGACAAATAGA 57.541 52.632 46.72 0.00 46.30 1.98
183 184 1.293924 CAGGCGCCTGACAAATAGAG 58.706 55.000 46.72 19.48 46.30 2.43
184 185 0.462759 AGGCGCCTGACAAATAGAGC 60.463 55.000 32.33 0.00 0.00 4.09
185 186 1.440145 GGCGCCTGACAAATAGAGCC 61.440 60.000 22.15 0.00 33.87 4.70
186 187 0.462759 GCGCCTGACAAATAGAGCCT 60.463 55.000 0.00 0.00 0.00 4.58
187 188 1.576356 CGCCTGACAAATAGAGCCTC 58.424 55.000 0.00 0.00 0.00 4.70
188 189 1.808133 CGCCTGACAAATAGAGCCTCC 60.808 57.143 0.00 0.00 0.00 4.30
189 190 1.475930 GCCTGACAAATAGAGCCTCCC 60.476 57.143 0.00 0.00 0.00 4.30
190 191 2.122768 CCTGACAAATAGAGCCTCCCT 58.877 52.381 0.00 0.00 0.00 4.20
191 192 2.507471 CCTGACAAATAGAGCCTCCCTT 59.493 50.000 0.00 0.00 0.00 3.95
192 193 3.432890 CCTGACAAATAGAGCCTCCCTTC 60.433 52.174 0.00 0.00 0.00 3.46
193 194 3.454082 CTGACAAATAGAGCCTCCCTTCT 59.546 47.826 0.00 0.00 0.00 2.85
194 195 4.620723 TGACAAATAGAGCCTCCCTTCTA 58.379 43.478 0.00 0.00 0.00 2.10
195 196 4.406003 TGACAAATAGAGCCTCCCTTCTAC 59.594 45.833 0.00 0.00 0.00 2.59
196 197 4.625963 ACAAATAGAGCCTCCCTTCTACT 58.374 43.478 0.00 0.00 0.00 2.57
197 198 5.033522 ACAAATAGAGCCTCCCTTCTACTT 58.966 41.667 0.00 0.00 0.00 2.24
198 199 5.129650 ACAAATAGAGCCTCCCTTCTACTTC 59.870 44.000 0.00 0.00 0.00 3.01
199 200 2.168458 AGAGCCTCCCTTCTACTTCC 57.832 55.000 0.00 0.00 0.00 3.46
200 201 1.649100 AGAGCCTCCCTTCTACTTCCT 59.351 52.381 0.00 0.00 0.00 3.36
201 202 2.036387 GAGCCTCCCTTCTACTTCCTC 58.964 57.143 0.00 0.00 0.00 3.71
202 203 1.124780 GCCTCCCTTCTACTTCCTCC 58.875 60.000 0.00 0.00 0.00 4.30
203 204 1.404843 CCTCCCTTCTACTTCCTCCG 58.595 60.000 0.00 0.00 0.00 4.63
204 205 1.342175 CCTCCCTTCTACTTCCTCCGT 60.342 57.143 0.00 0.00 0.00 4.69
205 206 2.458620 CTCCCTTCTACTTCCTCCGTT 58.541 52.381 0.00 0.00 0.00 4.44
206 207 2.832733 CTCCCTTCTACTTCCTCCGTTT 59.167 50.000 0.00 0.00 0.00 3.60
207 208 2.830321 TCCCTTCTACTTCCTCCGTTTC 59.170 50.000 0.00 0.00 0.00 2.78
208 209 2.832733 CCCTTCTACTTCCTCCGTTTCT 59.167 50.000 0.00 0.00 0.00 2.52
209 210 4.021916 CCCTTCTACTTCCTCCGTTTCTA 58.978 47.826 0.00 0.00 0.00 2.10
210 211 4.465305 CCCTTCTACTTCCTCCGTTTCTAA 59.535 45.833 0.00 0.00 0.00 2.10
211 212 5.046807 CCCTTCTACTTCCTCCGTTTCTAAA 60.047 44.000 0.00 0.00 0.00 1.85
212 213 6.351966 CCCTTCTACTTCCTCCGTTTCTAAAT 60.352 42.308 0.00 0.00 0.00 1.40
213 214 7.147776 CCCTTCTACTTCCTCCGTTTCTAAATA 60.148 40.741 0.00 0.00 0.00 1.40
214 215 8.422566 CCTTCTACTTCCTCCGTTTCTAAATAT 58.577 37.037 0.00 0.00 0.00 1.28
220 221 8.979534 ACTTCCTCCGTTTCTAAATATAAGTCT 58.020 33.333 0.00 0.00 0.00 3.24
221 222 9.819267 CTTCCTCCGTTTCTAAATATAAGTCTT 57.181 33.333 0.00 0.00 0.00 3.01
286 287 9.822185 AGAGTAAAATTTTCACTCAATTTGCTT 57.178 25.926 25.52 11.79 40.94 3.91
289 290 9.986833 GTAAAATTTTCACTCAATTTGCTTTGT 57.013 25.926 6.72 0.00 34.68 2.83
293 294 8.891671 ATTTTCACTCAATTTGCTTTGTATGT 57.108 26.923 0.00 0.00 0.00 2.29
294 295 9.979578 ATTTTCACTCAATTTGCTTTGTATGTA 57.020 25.926 0.00 0.00 0.00 2.29
295 296 8.795786 TTTCACTCAATTTGCTTTGTATGTAC 57.204 30.769 0.00 0.00 0.00 2.90
296 297 7.744087 TCACTCAATTTGCTTTGTATGTACT 57.256 32.000 0.00 0.00 0.00 2.73
297 298 7.806690 TCACTCAATTTGCTTTGTATGTACTC 58.193 34.615 0.00 0.00 0.00 2.59
298 299 7.023575 CACTCAATTTGCTTTGTATGTACTCC 58.976 38.462 0.00 0.00 0.00 3.85
299 300 6.151144 ACTCAATTTGCTTTGTATGTACTCCC 59.849 38.462 0.00 0.00 0.00 4.30
300 301 5.417580 TCAATTTGCTTTGTATGTACTCCCC 59.582 40.000 0.00 0.00 0.00 4.81
301 302 3.359695 TTGCTTTGTATGTACTCCCCC 57.640 47.619 0.00 0.00 0.00 5.40
302 303 1.208535 TGCTTTGTATGTACTCCCCCG 59.791 52.381 0.00 0.00 0.00 5.73
303 304 1.208776 GCTTTGTATGTACTCCCCCGT 59.791 52.381 0.00 0.00 0.00 5.28
304 305 2.740904 GCTTTGTATGTACTCCCCCGTC 60.741 54.545 0.00 0.00 0.00 4.79
305 306 1.488390 TTGTATGTACTCCCCCGTCC 58.512 55.000 0.00 0.00 0.00 4.79
306 307 0.397535 TGTATGTACTCCCCCGTCCC 60.398 60.000 0.00 0.00 0.00 4.46
307 308 0.397535 GTATGTACTCCCCCGTCCCA 60.398 60.000 0.00 0.00 0.00 4.37
308 309 0.564171 TATGTACTCCCCCGTCCCAT 59.436 55.000 0.00 0.00 0.00 4.00
309 310 0.564171 ATGTACTCCCCCGTCCCATA 59.436 55.000 0.00 0.00 0.00 2.74
310 311 0.339162 TGTACTCCCCCGTCCCATAA 59.661 55.000 0.00 0.00 0.00 1.90
311 312 1.061967 TGTACTCCCCCGTCCCATAAT 60.062 52.381 0.00 0.00 0.00 1.28
312 313 2.179645 TGTACTCCCCCGTCCCATAATA 59.820 50.000 0.00 0.00 0.00 0.98
313 314 2.735259 ACTCCCCCGTCCCATAATAT 57.265 50.000 0.00 0.00 0.00 1.28
314 315 3.858696 ACTCCCCCGTCCCATAATATA 57.141 47.619 0.00 0.00 0.00 0.86
315 316 4.150516 ACTCCCCCGTCCCATAATATAA 57.849 45.455 0.00 0.00 0.00 0.98
316 317 4.101856 ACTCCCCCGTCCCATAATATAAG 58.898 47.826 0.00 0.00 0.00 1.73
317 318 4.202858 ACTCCCCCGTCCCATAATATAAGA 60.203 45.833 0.00 0.00 0.00 2.10
318 319 4.765629 TCCCCCGTCCCATAATATAAGAA 58.234 43.478 0.00 0.00 0.00 2.52
319 320 5.355711 TCCCCCGTCCCATAATATAAGAAT 58.644 41.667 0.00 0.00 0.00 2.40
875 878 2.252714 GCTCCCCTCCCTGACTATAAG 58.747 57.143 0.00 0.00 0.00 1.73
878 881 4.409187 CTCCCCTCCCTGACTATAAGTAC 58.591 52.174 0.00 0.00 0.00 2.73
918 922 2.311463 GAATCCATCCACCTCTCGAGA 58.689 52.381 15.70 15.70 0.00 4.04
952 956 2.358003 AAGCGAGCAGAGCACACC 60.358 61.111 0.00 0.00 37.01 4.16
956 960 3.117171 GAGCAGAGCACACCGCAG 61.117 66.667 0.00 0.00 46.13 5.18
979 991 1.268079 GCAGCAGTTTCCCTTTCAGAC 59.732 52.381 0.00 0.00 0.00 3.51
1100 1118 2.050934 ACCCGACCTACTTCGAGGC 61.051 63.158 0.00 0.00 41.78 4.70
1159 1193 1.243902 GGTTTTGACTGCGATTGGGA 58.756 50.000 0.00 0.00 0.00 4.37
1228 6166 2.811317 GCGCTCAAGGACAGGACG 60.811 66.667 0.00 0.00 0.00 4.79
1455 6426 2.335712 CCGCCAAGGCCAAGAAGAC 61.336 63.158 5.01 0.00 37.98 3.01
1458 6429 1.073199 CCAAGGCCAAGAAGACGGT 59.927 57.895 5.01 0.00 0.00 4.83
1774 6783 5.245531 GTGTCTGGAATGTTCAGGTATCAA 58.754 41.667 0.00 0.00 33.36 2.57
1801 6811 4.478206 TCCAGCTCTAACTCTGAAATGG 57.522 45.455 0.00 0.00 32.26 3.16
1847 6885 5.732247 GCGATTGTTTGTTGGTTGTACTTCT 60.732 40.000 0.00 0.00 0.00 2.85
1848 6886 6.262601 CGATTGTTTGTTGGTTGTACTTCTT 58.737 36.000 0.00 0.00 0.00 2.52
1849 6887 6.750039 CGATTGTTTGTTGGTTGTACTTCTTT 59.250 34.615 0.00 0.00 0.00 2.52
1850 6888 7.274686 CGATTGTTTGTTGGTTGTACTTCTTTT 59.725 33.333 0.00 0.00 0.00 2.27
1851 6889 8.840833 ATTGTTTGTTGGTTGTACTTCTTTTT 57.159 26.923 0.00 0.00 0.00 1.94
1871 6909 6.740411 TTTTTGTTACGAGTTGGTTGTACT 57.260 33.333 0.00 0.00 0.00 2.73
1872 6910 6.740411 TTTTGTTACGAGTTGGTTGTACTT 57.260 33.333 0.00 0.00 0.00 2.24
1873 6911 5.971895 TTGTTACGAGTTGGTTGTACTTC 57.028 39.130 0.00 0.00 0.00 3.01
1877 6915 4.771590 ACGAGTTGGTTGTACTTCGATA 57.228 40.909 0.00 0.00 0.00 2.92
1914 6983 1.000359 CAATTTCCCCTTCGCCCCT 60.000 57.895 0.00 0.00 0.00 4.79
1915 6984 0.614697 CAATTTCCCCTTCGCCCCTT 60.615 55.000 0.00 0.00 0.00 3.95
1916 6985 0.116342 AATTTCCCCTTCGCCCCTTT 59.884 50.000 0.00 0.00 0.00 3.11
1917 6986 0.324368 ATTTCCCCTTCGCCCCTTTC 60.324 55.000 0.00 0.00 0.00 2.62
1918 6987 1.432023 TTTCCCCTTCGCCCCTTTCT 61.432 55.000 0.00 0.00 0.00 2.52
1919 6988 0.548197 TTCCCCTTCGCCCCTTTCTA 60.548 55.000 0.00 0.00 0.00 2.10
1920 6989 1.223763 CCCCTTCGCCCCTTTCTAC 59.776 63.158 0.00 0.00 0.00 2.59
1921 6990 1.272554 CCCCTTCGCCCCTTTCTACT 61.273 60.000 0.00 0.00 0.00 2.57
1922 6991 0.618981 CCCTTCGCCCCTTTCTACTT 59.381 55.000 0.00 0.00 0.00 2.24
1923 6992 1.679032 CCCTTCGCCCCTTTCTACTTG 60.679 57.143 0.00 0.00 0.00 3.16
1924 6993 1.003233 CCTTCGCCCCTTTCTACTTGT 59.997 52.381 0.00 0.00 0.00 3.16
1925 6994 2.552373 CCTTCGCCCCTTTCTACTTGTT 60.552 50.000 0.00 0.00 0.00 2.83
1926 6995 2.467566 TCGCCCCTTTCTACTTGTTC 57.532 50.000 0.00 0.00 0.00 3.18
1927 6996 1.695242 TCGCCCCTTTCTACTTGTTCA 59.305 47.619 0.00 0.00 0.00 3.18
1928 6997 2.105134 TCGCCCCTTTCTACTTGTTCAA 59.895 45.455 0.00 0.00 0.00 2.69
1929 6998 2.484264 CGCCCCTTTCTACTTGTTCAAG 59.516 50.000 10.50 10.50 0.00 3.02
1930 6999 3.487372 GCCCCTTTCTACTTGTTCAAGT 58.513 45.455 19.64 19.64 36.82 3.16
1931 7000 3.889538 GCCCCTTTCTACTTGTTCAAGTT 59.110 43.478 20.66 7.83 34.37 2.66
1932 7001 4.023107 GCCCCTTTCTACTTGTTCAAGTTC 60.023 45.833 20.66 0.54 34.37 3.01
1933 7002 5.130350 CCCCTTTCTACTTGTTCAAGTTCA 58.870 41.667 20.66 7.59 34.37 3.18
1934 7003 5.239525 CCCCTTTCTACTTGTTCAAGTTCAG 59.760 44.000 20.66 14.01 34.37 3.02
1935 7004 5.823045 CCCTTTCTACTTGTTCAAGTTCAGT 59.177 40.000 20.66 2.05 34.37 3.41
1936 7005 6.318900 CCCTTTCTACTTGTTCAAGTTCAGTT 59.681 38.462 20.66 0.89 34.37 3.16
1937 7006 7.189512 CCTTTCTACTTGTTCAAGTTCAGTTG 58.810 38.462 20.66 9.27 34.37 3.16
1938 7007 5.734855 TCTACTTGTTCAAGTTCAGTTGC 57.265 39.130 20.66 0.00 34.37 4.17
1939 7008 3.405170 ACTTGTTCAAGTTCAGTTGCG 57.595 42.857 11.75 0.00 0.00 4.85
1940 7009 2.097466 ACTTGTTCAAGTTCAGTTGCGG 59.903 45.455 11.75 0.00 0.00 5.69
1941 7010 0.380378 TGTTCAAGTTCAGTTGCGGC 59.620 50.000 0.00 0.00 0.00 6.53
1942 7011 0.317854 GTTCAAGTTCAGTTGCGGCC 60.318 55.000 0.00 0.00 0.00 6.13
1943 7012 0.465460 TTCAAGTTCAGTTGCGGCCT 60.465 50.000 0.00 0.00 0.00 5.19
1944 7013 0.884704 TCAAGTTCAGTTGCGGCCTC 60.885 55.000 0.00 0.00 0.00 4.70
1974 7043 1.081892 CGACAAGATTGAGGGCACTG 58.918 55.000 0.00 0.00 0.00 3.66
2020 7089 1.221021 GTGGAACTCCCGATCACCC 59.779 63.158 0.00 0.00 37.93 4.61
2021 7090 1.993391 TGGAACTCCCGATCACCCC 60.993 63.158 0.00 0.00 37.93 4.95
2022 7091 1.689582 GGAACTCCCGATCACCCCT 60.690 63.158 0.00 0.00 0.00 4.79
2023 7092 1.687297 GGAACTCCCGATCACCCCTC 61.687 65.000 0.00 0.00 0.00 4.30
2024 7093 0.976073 GAACTCCCGATCACCCCTCA 60.976 60.000 0.00 0.00 0.00 3.86
2025 7094 0.546747 AACTCCCGATCACCCCTCAA 60.547 55.000 0.00 0.00 0.00 3.02
2036 7105 5.356751 CGATCACCCCTCAATCAATTGTAAA 59.643 40.000 5.13 0.00 38.84 2.01
2037 7106 5.975693 TCACCCCTCAATCAATTGTAAAC 57.024 39.130 5.13 0.00 38.84 2.01
2044 7114 4.013728 TCAATCAATTGTAAACGAGGGGG 58.986 43.478 5.13 0.00 38.84 5.40
2102 7180 2.046700 GTTTCGACCATCCGGGCA 60.047 61.111 0.00 0.00 42.68 5.36
2147 8642 1.138859 TGATCAACTTCCATCGGCGAT 59.861 47.619 18.14 18.14 0.00 4.58
2232 8729 4.467084 GCCCGTCTCGCCAATCCA 62.467 66.667 0.00 0.00 0.00 3.41
2266 8763 1.424493 CGCTTGCCGATCAACTCTCC 61.424 60.000 0.00 0.00 40.02 3.71
2324 8822 3.115892 TCCGCGCAATGAACCGTC 61.116 61.111 8.75 0.00 0.00 4.79
2359 8859 1.568504 TCTAACCCCCTGTGTAGCAG 58.431 55.000 0.00 0.00 44.63 4.24
2400 8904 6.369615 CCTTTTGAGTAAATGAAAATGCCCTG 59.630 38.462 0.00 0.00 0.00 4.45
2419 8923 1.439365 GCAGAAGCACAACGAAGCG 60.439 57.895 0.00 0.00 41.58 4.68
2420 8924 1.831389 GCAGAAGCACAACGAAGCGA 61.831 55.000 0.00 0.00 41.58 4.93
2422 8926 0.529773 AGAAGCACAACGAAGCGACA 60.530 50.000 0.00 0.00 35.48 4.35
2436 8940 4.021650 GACACGTGTCGCTTTCCA 57.978 55.556 31.03 0.00 35.12 3.53
2437 8941 1.563173 GACACGTGTCGCTTTCCAC 59.437 57.895 31.03 7.70 35.12 4.02
2438 8942 1.828331 GACACGTGTCGCTTTCCACC 61.828 60.000 31.03 6.94 35.12 4.61
2439 8943 1.885388 CACGTGTCGCTTTCCACCA 60.885 57.895 7.58 0.00 0.00 4.17
2440 8944 1.070786 ACGTGTCGCTTTCCACCAT 59.929 52.632 0.00 0.00 0.00 3.55
2441 8945 0.319083 ACGTGTCGCTTTCCACCATA 59.681 50.000 0.00 0.00 0.00 2.74
2442 8946 0.719465 CGTGTCGCTTTCCACCATAC 59.281 55.000 0.00 0.00 0.00 2.39
2443 8947 1.084289 GTGTCGCTTTCCACCATACC 58.916 55.000 0.00 0.00 0.00 2.73
2444 8948 0.035820 TGTCGCTTTCCACCATACCC 60.036 55.000 0.00 0.00 0.00 3.69
2445 8949 0.252197 GTCGCTTTCCACCATACCCT 59.748 55.000 0.00 0.00 0.00 4.34
2446 8950 1.483415 GTCGCTTTCCACCATACCCTA 59.517 52.381 0.00 0.00 0.00 3.53
2447 8951 2.104281 GTCGCTTTCCACCATACCCTAT 59.896 50.000 0.00 0.00 0.00 2.57
2448 8952 2.775384 TCGCTTTCCACCATACCCTATT 59.225 45.455 0.00 0.00 0.00 1.73
2449 8953 3.968649 TCGCTTTCCACCATACCCTATTA 59.031 43.478 0.00 0.00 0.00 0.98
2450 8954 4.062991 CGCTTTCCACCATACCCTATTAC 58.937 47.826 0.00 0.00 0.00 1.89
2451 8955 4.443739 CGCTTTCCACCATACCCTATTACA 60.444 45.833 0.00 0.00 0.00 2.41
2452 8956 5.442391 GCTTTCCACCATACCCTATTACAA 58.558 41.667 0.00 0.00 0.00 2.41
2453 8957 5.889289 GCTTTCCACCATACCCTATTACAAA 59.111 40.000 0.00 0.00 0.00 2.83
2454 8958 6.378848 GCTTTCCACCATACCCTATTACAAAA 59.621 38.462 0.00 0.00 0.00 2.44
2455 8959 7.069455 GCTTTCCACCATACCCTATTACAAAAT 59.931 37.037 0.00 0.00 0.00 1.82
2456 8960 7.889873 TTCCACCATACCCTATTACAAAATG 57.110 36.000 0.00 0.00 0.00 2.32
2457 8961 6.975949 TCCACCATACCCTATTACAAAATGT 58.024 36.000 0.00 0.00 0.00 2.71
2458 8962 8.103660 TCCACCATACCCTATTACAAAATGTA 57.896 34.615 0.00 0.00 0.00 2.29
2459 8963 7.994334 TCCACCATACCCTATTACAAAATGTAC 59.006 37.037 0.00 0.00 31.69 2.90
2460 8964 7.776030 CCACCATACCCTATTACAAAATGTACA 59.224 37.037 0.00 0.00 31.69 2.90
2461 8965 8.617809 CACCATACCCTATTACAAAATGTACAC 58.382 37.037 0.00 0.00 31.69 2.90
2462 8966 7.496591 ACCATACCCTATTACAAAATGTACACG 59.503 37.037 0.00 0.00 31.69 4.49
2463 8967 7.496591 CCATACCCTATTACAAAATGTACACGT 59.503 37.037 0.00 0.00 31.69 4.49
2464 8968 6.730960 ACCCTATTACAAAATGTACACGTG 57.269 37.500 15.48 15.48 31.69 4.49
2465 8969 6.232692 ACCCTATTACAAAATGTACACGTGT 58.767 36.000 26.52 26.52 31.69 4.49
2466 8970 6.148150 ACCCTATTACAAAATGTACACGTGTG 59.852 38.462 30.83 14.57 31.69 3.82
2467 8971 6.402766 CCCTATTACAAAATGTACACGTGTGG 60.403 42.308 30.83 16.85 31.69 4.17
2468 8972 4.815040 TTACAAAATGTACACGTGTGGG 57.185 40.909 30.83 13.56 31.69 4.61
2469 8973 1.335496 ACAAAATGTACACGTGTGGGC 59.665 47.619 30.83 19.68 34.19 5.36
2470 8974 1.335182 CAAAATGTACACGTGTGGGCA 59.665 47.619 30.83 24.14 34.19 5.36
2471 8975 1.234821 AAATGTACACGTGTGGGCAG 58.765 50.000 30.83 0.00 34.19 4.85
2472 8976 0.605319 AATGTACACGTGTGGGCAGG 60.605 55.000 30.83 0.00 36.63 4.85
2473 8977 1.764571 ATGTACACGTGTGGGCAGGT 61.765 55.000 30.83 10.10 43.55 4.00
2474 8978 1.666872 GTACACGTGTGGGCAGGTC 60.667 63.158 30.83 7.22 41.18 3.85
2475 8979 2.134933 TACACGTGTGGGCAGGTCA 61.135 57.895 30.83 4.53 41.18 4.02
2476 8980 2.372040 TACACGTGTGGGCAGGTCAC 62.372 60.000 30.83 0.00 41.18 3.67
2477 8981 3.475494 ACGTGTGGGCAGGTCACA 61.475 61.111 0.00 0.00 39.20 3.58
2478 8982 2.666190 CGTGTGGGCAGGTCACAG 60.666 66.667 0.00 0.00 44.52 3.66
2479 8983 2.980233 GTGTGGGCAGGTCACAGC 60.980 66.667 0.00 0.00 44.52 4.40
2480 8984 3.170672 TGTGGGCAGGTCACAGCT 61.171 61.111 0.00 0.00 39.83 4.24
2481 8985 2.670934 GTGGGCAGGTCACAGCTG 60.671 66.667 13.48 13.48 45.86 4.24
2486 8990 2.359602 CAGGTCACAGCTGCCAGG 60.360 66.667 15.27 0.85 36.88 4.45
2487 8991 2.851102 AGGTCACAGCTGCCAGGT 60.851 61.111 15.27 0.00 0.00 4.00
2493 8997 2.111669 CAGCTGCCAGGTGTGTCA 59.888 61.111 15.60 0.00 38.80 3.58
2494 8998 2.111878 AGCTGCCAGGTGTGTCAC 59.888 61.111 0.00 0.00 0.00 3.67
2495 8999 2.111878 GCTGCCAGGTGTGTCACT 59.888 61.111 4.27 0.00 34.40 3.41
2496 9000 1.526917 GCTGCCAGGTGTGTCACTT 60.527 57.895 4.27 0.00 34.40 3.16
2497 9001 0.250295 GCTGCCAGGTGTGTCACTTA 60.250 55.000 4.27 0.00 34.40 2.24
2498 9002 1.800805 CTGCCAGGTGTGTCACTTAG 58.199 55.000 4.27 0.00 34.40 2.18
2499 9003 1.344438 CTGCCAGGTGTGTCACTTAGA 59.656 52.381 4.27 0.00 34.40 2.10
2500 9004 1.344438 TGCCAGGTGTGTCACTTAGAG 59.656 52.381 4.27 0.00 34.40 2.43
2501 9005 1.941668 GCCAGGTGTGTCACTTAGAGC 60.942 57.143 4.27 0.00 34.40 4.09
2502 9006 1.344438 CCAGGTGTGTCACTTAGAGCA 59.656 52.381 4.27 0.00 34.40 4.26
2503 9007 2.027745 CCAGGTGTGTCACTTAGAGCAT 60.028 50.000 4.27 0.00 34.40 3.79
2504 9008 3.257393 CAGGTGTGTCACTTAGAGCATC 58.743 50.000 4.27 0.00 34.40 3.91
2505 9009 3.056250 CAGGTGTGTCACTTAGAGCATCT 60.056 47.826 4.27 0.00 41.10 2.90
2515 9019 2.280457 GAGCATCTACAGCCGGGC 60.280 66.667 12.11 12.11 0.00 6.13
2516 9020 4.227134 AGCATCTACAGCCGGGCG 62.227 66.667 14.39 11.21 0.00 6.13
2531 9035 3.577313 GCGCCTCAAATCCGCCTC 61.577 66.667 0.00 0.00 41.72 4.70
2532 9036 2.125147 CGCCTCAAATCCGCCTCA 60.125 61.111 0.00 0.00 0.00 3.86
2533 9037 1.524621 CGCCTCAAATCCGCCTCAT 60.525 57.895 0.00 0.00 0.00 2.90
2534 9038 0.249868 CGCCTCAAATCCGCCTCATA 60.250 55.000 0.00 0.00 0.00 2.15
2535 9039 1.230324 GCCTCAAATCCGCCTCATAC 58.770 55.000 0.00 0.00 0.00 2.39
2536 9040 1.502231 CCTCAAATCCGCCTCATACG 58.498 55.000 0.00 0.00 0.00 3.06
2537 9041 1.202533 CCTCAAATCCGCCTCATACGT 60.203 52.381 0.00 0.00 0.00 3.57
2538 9042 2.128035 CTCAAATCCGCCTCATACGTC 58.872 52.381 0.00 0.00 0.00 4.34
2539 9043 1.202486 TCAAATCCGCCTCATACGTCC 60.202 52.381 0.00 0.00 0.00 4.79
2540 9044 0.249322 AAATCCGCCTCATACGTCCG 60.249 55.000 0.00 0.00 0.00 4.79
2541 9045 2.083835 AATCCGCCTCATACGTCCGG 62.084 60.000 0.00 0.00 40.25 5.14
2542 9046 4.280494 CCGCCTCATACGTCCGGG 62.280 72.222 0.00 0.00 35.54 5.73
2543 9047 4.944372 CGCCTCATACGTCCGGGC 62.944 72.222 0.00 0.00 39.43 6.13
2544 9048 3.845259 GCCTCATACGTCCGGGCA 61.845 66.667 6.96 0.00 42.08 5.36
2545 9049 2.417516 CCTCATACGTCCGGGCAG 59.582 66.667 6.96 0.77 0.00 4.85
2546 9050 2.417516 CTCATACGTCCGGGCAGG 59.582 66.667 6.96 0.00 42.97 4.85
2547 9051 3.792053 CTCATACGTCCGGGCAGGC 62.792 68.421 6.96 0.00 40.77 4.85
2548 9052 4.910585 CATACGTCCGGGCAGGCC 62.911 72.222 6.96 1.81 40.77 5.19
2570 9074 3.936203 GGACACTGCCCGGTCACA 61.936 66.667 0.00 0.00 35.74 3.58
2571 9075 2.110213 GACACTGCCCGGTCACAA 59.890 61.111 0.00 0.00 34.22 3.33
2572 9076 1.302511 GACACTGCCCGGTCACAAT 60.303 57.895 0.00 0.00 34.22 2.71
2573 9077 0.889186 GACACTGCCCGGTCACAATT 60.889 55.000 0.00 0.00 34.22 2.32
2574 9078 0.467290 ACACTGCCCGGTCACAATTT 60.467 50.000 0.00 0.00 0.00 1.82
2575 9079 0.673437 CACTGCCCGGTCACAATTTT 59.327 50.000 0.00 0.00 0.00 1.82
2576 9080 1.068434 CACTGCCCGGTCACAATTTTT 59.932 47.619 0.00 0.00 0.00 1.94
2591 9095 3.637184 TTTTTGACCTAGACGGCCC 57.363 52.632 0.00 0.00 35.61 5.80
2592 9096 0.037160 TTTTTGACCTAGACGGCCCC 59.963 55.000 0.00 0.00 35.61 5.80
2593 9097 0.838987 TTTTGACCTAGACGGCCCCT 60.839 55.000 0.00 0.00 35.61 4.79
2594 9098 1.262640 TTTGACCTAGACGGCCCCTC 61.263 60.000 0.00 0.00 35.61 4.30
2595 9099 2.043248 GACCTAGACGGCCCCTCA 60.043 66.667 0.00 0.00 35.61 3.86
2596 9100 1.684734 GACCTAGACGGCCCCTCAA 60.685 63.158 0.00 0.00 35.61 3.02
2597 9101 1.229400 ACCTAGACGGCCCCTCAAA 60.229 57.895 0.00 0.00 35.61 2.69
2598 9102 1.221021 CCTAGACGGCCCCTCAAAC 59.779 63.158 0.00 0.00 0.00 2.93
2599 9103 1.265454 CCTAGACGGCCCCTCAAACT 61.265 60.000 0.00 0.00 0.00 2.66
2600 9104 1.481871 CTAGACGGCCCCTCAAACTA 58.518 55.000 0.00 0.00 0.00 2.24
2601 9105 1.136500 CTAGACGGCCCCTCAAACTAC 59.864 57.143 0.00 0.00 0.00 2.73
2602 9106 1.078637 GACGGCCCCTCAAACTACC 60.079 63.158 0.00 0.00 0.00 3.18
2603 9107 1.538135 ACGGCCCCTCAAACTACCT 60.538 57.895 0.00 0.00 0.00 3.08
2604 9108 1.078426 CGGCCCCTCAAACTACCTG 60.078 63.158 0.00 0.00 0.00 4.00
2605 9109 1.303282 GGCCCCTCAAACTACCTGG 59.697 63.158 0.00 0.00 0.00 4.45
2606 9110 1.378646 GCCCCTCAAACTACCTGGC 60.379 63.158 0.00 0.00 0.00 4.85
2607 9111 1.303282 CCCCTCAAACTACCTGGCC 59.697 63.158 0.00 0.00 0.00 5.36
2608 9112 1.497309 CCCCTCAAACTACCTGGCCA 61.497 60.000 4.71 4.71 0.00 5.36
2609 9113 0.404040 CCCTCAAACTACCTGGCCAA 59.596 55.000 7.01 0.00 0.00 4.52
2610 9114 1.203001 CCCTCAAACTACCTGGCCAAA 60.203 52.381 7.01 0.00 0.00 3.28
2611 9115 1.886542 CCTCAAACTACCTGGCCAAAC 59.113 52.381 7.01 0.00 0.00 2.93
2612 9116 1.535462 CTCAAACTACCTGGCCAAACG 59.465 52.381 7.01 0.00 0.00 3.60
2613 9117 0.596082 CAAACTACCTGGCCAAACGG 59.404 55.000 7.01 7.56 0.00 4.44
2614 9118 0.538746 AAACTACCTGGCCAAACGGG 60.539 55.000 7.01 7.12 42.81 5.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.494445 CTATCACGCACCGCCTCA 59.506 61.111 0.00 0.00 0.00 3.86
5 6 4.865761 TCGCTATCACGCACCGCC 62.866 66.667 0.00 0.00 0.00 6.13
6 7 3.617538 GTCGCTATCACGCACCGC 61.618 66.667 0.00 0.00 0.00 5.68
7 8 2.954868 GGTCGCTATCACGCACCG 60.955 66.667 0.00 0.00 0.00 4.94
8 9 2.954868 CGGTCGCTATCACGCACC 60.955 66.667 0.00 0.00 33.04 5.01
9 10 2.202570 ACGGTCGCTATCACGCAC 60.203 61.111 0.00 0.00 0.00 5.34
10 11 2.101575 GACGGTCGCTATCACGCA 59.898 61.111 0.00 0.00 0.00 5.24
11 12 3.017314 CGACGGTCGCTATCACGC 61.017 66.667 18.36 0.00 31.14 5.34
12 13 2.352001 CCGACGGTCGCTATCACG 60.352 66.667 24.26 5.70 38.82 4.35
13 14 2.654404 GCCGACGGTCGCTATCAC 60.654 66.667 24.26 5.72 38.82 3.06
14 15 3.896133 GGCCGACGGTCGCTATCA 61.896 66.667 24.26 0.00 38.82 2.15
15 16 3.896133 TGGCCGACGGTCGCTATC 61.896 66.667 24.26 12.91 38.82 2.08
16 17 4.203076 GTGGCCGACGGTCGCTAT 62.203 66.667 24.24 0.00 38.82 2.97
27 28 4.838152 CTCCATCACCCGTGGCCG 62.838 72.222 0.00 0.00 36.66 6.13
28 29 3.399181 TCTCCATCACCCGTGGCC 61.399 66.667 0.00 0.00 36.66 5.36
29 30 2.125106 GTCTCCATCACCCGTGGC 60.125 66.667 0.00 0.00 36.66 5.01
30 31 1.219124 CAGTCTCCATCACCCGTGG 59.781 63.158 0.00 0.00 38.11 4.94
31 32 1.219124 CCAGTCTCCATCACCCGTG 59.781 63.158 0.00 0.00 0.00 4.94
32 33 2.660064 GCCAGTCTCCATCACCCGT 61.660 63.158 0.00 0.00 0.00 5.28
33 34 2.187946 GCCAGTCTCCATCACCCG 59.812 66.667 0.00 0.00 0.00 5.28
34 35 2.187946 CGCCAGTCTCCATCACCC 59.812 66.667 0.00 0.00 0.00 4.61
35 36 2.185310 AACCGCCAGTCTCCATCACC 62.185 60.000 0.00 0.00 0.00 4.02
36 37 0.535335 TAACCGCCAGTCTCCATCAC 59.465 55.000 0.00 0.00 0.00 3.06
37 38 1.138859 CATAACCGCCAGTCTCCATCA 59.861 52.381 0.00 0.00 0.00 3.07
38 39 1.541233 CCATAACCGCCAGTCTCCATC 60.541 57.143 0.00 0.00 0.00 3.51
39 40 0.469917 CCATAACCGCCAGTCTCCAT 59.530 55.000 0.00 0.00 0.00 3.41
40 41 1.904771 CCATAACCGCCAGTCTCCA 59.095 57.895 0.00 0.00 0.00 3.86
41 42 1.523938 GCCATAACCGCCAGTCTCC 60.524 63.158 0.00 0.00 0.00 3.71
42 43 1.883084 CGCCATAACCGCCAGTCTC 60.883 63.158 0.00 0.00 0.00 3.36
43 44 2.186903 CGCCATAACCGCCAGTCT 59.813 61.111 0.00 0.00 0.00 3.24
44 45 2.895372 CCGCCATAACCGCCAGTC 60.895 66.667 0.00 0.00 0.00 3.51
45 46 4.483243 CCCGCCATAACCGCCAGT 62.483 66.667 0.00 0.00 0.00 4.00
48 49 3.819877 CTACCCCGCCATAACCGCC 62.820 68.421 0.00 0.00 0.00 6.13
49 50 2.280592 CTACCCCGCCATAACCGC 60.281 66.667 0.00 0.00 0.00 5.68
50 51 2.424302 CCTACCCCGCCATAACCG 59.576 66.667 0.00 0.00 0.00 4.44
51 52 2.112507 GCCTACCCCGCCATAACC 59.887 66.667 0.00 0.00 0.00 2.85
52 53 0.818040 CTTGCCTACCCCGCCATAAC 60.818 60.000 0.00 0.00 0.00 1.89
53 54 0.983905 TCTTGCCTACCCCGCCATAA 60.984 55.000 0.00 0.00 0.00 1.90
54 55 0.983905 TTCTTGCCTACCCCGCCATA 60.984 55.000 0.00 0.00 0.00 2.74
55 56 2.270874 CTTCTTGCCTACCCCGCCAT 62.271 60.000 0.00 0.00 0.00 4.40
56 57 2.931105 TTCTTGCCTACCCCGCCA 60.931 61.111 0.00 0.00 0.00 5.69
57 58 1.984288 ATCTTCTTGCCTACCCCGCC 61.984 60.000 0.00 0.00 0.00 6.13
58 59 0.815615 CATCTTCTTGCCTACCCCGC 60.816 60.000 0.00 0.00 0.00 6.13
59 60 0.830648 TCATCTTCTTGCCTACCCCG 59.169 55.000 0.00 0.00 0.00 5.73
60 61 2.439507 TCATCATCTTCTTGCCTACCCC 59.560 50.000 0.00 0.00 0.00 4.95
61 62 3.845781 TCATCATCTTCTTGCCTACCC 57.154 47.619 0.00 0.00 0.00 3.69
62 63 4.517285 TGTTCATCATCTTCTTGCCTACC 58.483 43.478 0.00 0.00 0.00 3.18
63 64 5.181748 ACTGTTCATCATCTTCTTGCCTAC 58.818 41.667 0.00 0.00 0.00 3.18
64 65 5.426689 ACTGTTCATCATCTTCTTGCCTA 57.573 39.130 0.00 0.00 0.00 3.93
65 66 4.298103 ACTGTTCATCATCTTCTTGCCT 57.702 40.909 0.00 0.00 0.00 4.75
66 67 4.034975 GCTACTGTTCATCATCTTCTTGCC 59.965 45.833 0.00 0.00 0.00 4.52
67 68 4.633126 TGCTACTGTTCATCATCTTCTTGC 59.367 41.667 0.00 0.00 0.00 4.01
68 69 5.220359 CGTGCTACTGTTCATCATCTTCTTG 60.220 44.000 0.00 0.00 0.00 3.02
69 70 4.867047 CGTGCTACTGTTCATCATCTTCTT 59.133 41.667 0.00 0.00 0.00 2.52
70 71 4.158579 TCGTGCTACTGTTCATCATCTTCT 59.841 41.667 0.00 0.00 0.00 2.85
71 72 4.424626 TCGTGCTACTGTTCATCATCTTC 58.575 43.478 0.00 0.00 0.00 2.87
72 73 4.456280 TCGTGCTACTGTTCATCATCTT 57.544 40.909 0.00 0.00 0.00 2.40
73 74 4.340666 AGATCGTGCTACTGTTCATCATCT 59.659 41.667 0.00 0.00 0.00 2.90
74 75 4.615949 AGATCGTGCTACTGTTCATCATC 58.384 43.478 0.00 0.00 0.00 2.92
75 76 4.662468 AGATCGTGCTACTGTTCATCAT 57.338 40.909 0.00 0.00 0.00 2.45
76 77 5.774498 ATAGATCGTGCTACTGTTCATCA 57.226 39.130 0.00 0.00 0.00 3.07
77 78 7.340699 CAAAATAGATCGTGCTACTGTTCATC 58.659 38.462 0.00 0.00 0.00 2.92
78 79 6.258727 CCAAAATAGATCGTGCTACTGTTCAT 59.741 38.462 0.00 0.00 0.00 2.57
79 80 5.580691 CCAAAATAGATCGTGCTACTGTTCA 59.419 40.000 0.00 0.00 0.00 3.18
80 81 5.006746 CCCAAAATAGATCGTGCTACTGTTC 59.993 44.000 0.00 0.00 0.00 3.18
81 82 4.876107 CCCAAAATAGATCGTGCTACTGTT 59.124 41.667 0.00 0.00 0.00 3.16
82 83 4.442706 CCCAAAATAGATCGTGCTACTGT 58.557 43.478 0.00 0.00 0.00 3.55
83 84 3.248602 GCCCAAAATAGATCGTGCTACTG 59.751 47.826 0.00 0.00 0.00 2.74
84 85 3.467803 GCCCAAAATAGATCGTGCTACT 58.532 45.455 0.00 0.00 0.00 2.57
85 86 2.548480 GGCCCAAAATAGATCGTGCTAC 59.452 50.000 0.00 0.00 0.00 3.58
86 87 2.171659 TGGCCCAAAATAGATCGTGCTA 59.828 45.455 0.00 0.00 0.00 3.49
87 88 1.064758 TGGCCCAAAATAGATCGTGCT 60.065 47.619 0.00 0.00 0.00 4.40
88 89 1.065551 GTGGCCCAAAATAGATCGTGC 59.934 52.381 0.00 0.00 0.00 5.34
89 90 2.355756 CAGTGGCCCAAAATAGATCGTG 59.644 50.000 0.00 0.00 0.00 4.35
90 91 2.643551 CAGTGGCCCAAAATAGATCGT 58.356 47.619 0.00 0.00 0.00 3.73
91 92 1.949525 CCAGTGGCCCAAAATAGATCG 59.050 52.381 0.00 0.00 0.00 3.69
92 93 3.297134 TCCAGTGGCCCAAAATAGATC 57.703 47.619 3.51 0.00 0.00 2.75
93 94 3.205056 TGATCCAGTGGCCCAAAATAGAT 59.795 43.478 3.51 0.00 0.00 1.98
94 95 2.580322 TGATCCAGTGGCCCAAAATAGA 59.420 45.455 3.51 0.00 0.00 1.98
95 96 3.017048 TGATCCAGTGGCCCAAAATAG 57.983 47.619 3.51 0.00 0.00 1.73
96 97 3.011144 TCTTGATCCAGTGGCCCAAAATA 59.989 43.478 3.51 0.00 0.00 1.40
97 98 2.181975 CTTGATCCAGTGGCCCAAAAT 58.818 47.619 3.51 0.00 0.00 1.82
98 99 1.146774 TCTTGATCCAGTGGCCCAAAA 59.853 47.619 3.51 0.00 0.00 2.44
99 100 0.776810 TCTTGATCCAGTGGCCCAAA 59.223 50.000 3.51 0.00 0.00 3.28
100 101 1.002069 ATCTTGATCCAGTGGCCCAA 58.998 50.000 3.51 9.83 0.00 4.12
101 102 1.002069 AATCTTGATCCAGTGGCCCA 58.998 50.000 3.51 1.38 0.00 5.36
102 103 1.753073 CAAATCTTGATCCAGTGGCCC 59.247 52.381 3.51 0.00 0.00 5.80
103 104 2.424956 GTCAAATCTTGATCCAGTGGCC 59.575 50.000 3.51 0.00 42.47 5.36
104 105 3.084039 TGTCAAATCTTGATCCAGTGGC 58.916 45.455 3.51 0.00 42.47 5.01
105 106 5.909621 ATTGTCAAATCTTGATCCAGTGG 57.090 39.130 1.40 1.40 42.47 4.00
106 107 7.061441 CGAAAATTGTCAAATCTTGATCCAGTG 59.939 37.037 0.00 0.00 42.47 3.66
107 108 7.086376 CGAAAATTGTCAAATCTTGATCCAGT 58.914 34.615 0.00 0.00 42.47 4.00
108 109 7.086376 ACGAAAATTGTCAAATCTTGATCCAG 58.914 34.615 0.00 0.00 42.47 3.86
109 110 6.980593 ACGAAAATTGTCAAATCTTGATCCA 58.019 32.000 0.00 0.00 42.47 3.41
119 120 9.522804 ACTGCTTTTTATACGAAAATTGTCAAA 57.477 25.926 0.00 0.00 0.00 2.69
120 121 9.522804 AACTGCTTTTTATACGAAAATTGTCAA 57.477 25.926 0.00 0.00 0.00 3.18
121 122 8.963130 CAACTGCTTTTTATACGAAAATTGTCA 58.037 29.630 0.00 0.00 0.00 3.58
122 123 9.176181 TCAACTGCTTTTTATACGAAAATTGTC 57.824 29.630 0.00 0.00 0.00 3.18
123 124 9.691362 ATCAACTGCTTTTTATACGAAAATTGT 57.309 25.926 0.00 0.00 0.00 2.71
124 125 9.941991 CATCAACTGCTTTTTATACGAAAATTG 57.058 29.630 0.00 0.00 0.00 2.32
158 159 0.753479 TTGTCAGGCGCCTGGAAAAA 60.753 50.000 46.58 33.02 43.75 1.94
159 160 0.753479 TTTGTCAGGCGCCTGGAAAA 60.753 50.000 46.58 39.61 43.75 2.29
160 161 0.539438 ATTTGTCAGGCGCCTGGAAA 60.539 50.000 46.58 40.45 43.75 3.13
161 162 0.326595 TATTTGTCAGGCGCCTGGAA 59.673 50.000 46.58 36.99 43.75 3.53
162 163 0.107703 CTATTTGTCAGGCGCCTGGA 60.108 55.000 46.58 33.79 43.75 3.86
163 164 0.107703 TCTATTTGTCAGGCGCCTGG 60.108 55.000 46.58 31.93 43.75 4.45
164 165 1.293924 CTCTATTTGTCAGGCGCCTG 58.706 55.000 44.24 44.24 44.86 4.85
165 166 0.462759 GCTCTATTTGTCAGGCGCCT 60.463 55.000 27.08 27.08 0.00 5.52
166 167 1.440145 GGCTCTATTTGTCAGGCGCC 61.440 60.000 21.89 21.89 0.00 6.53
167 168 0.462759 AGGCTCTATTTGTCAGGCGC 60.463 55.000 0.00 0.00 37.77 6.53
168 169 1.576356 GAGGCTCTATTTGTCAGGCG 58.424 55.000 7.40 0.00 37.77 5.52
169 170 1.475930 GGGAGGCTCTATTTGTCAGGC 60.476 57.143 15.23 0.00 0.00 4.85
170 171 2.122768 AGGGAGGCTCTATTTGTCAGG 58.877 52.381 15.23 0.00 0.00 3.86
171 172 3.454082 AGAAGGGAGGCTCTATTTGTCAG 59.546 47.826 15.23 0.00 0.00 3.51
172 173 3.454858 AGAAGGGAGGCTCTATTTGTCA 58.545 45.455 15.23 0.00 0.00 3.58
173 174 4.651962 AGTAGAAGGGAGGCTCTATTTGTC 59.348 45.833 15.23 4.07 0.00 3.18
174 175 4.625963 AGTAGAAGGGAGGCTCTATTTGT 58.374 43.478 15.23 7.61 0.00 2.83
175 176 5.454045 GGAAGTAGAAGGGAGGCTCTATTTG 60.454 48.000 15.23 0.00 27.79 2.32
176 177 4.656575 GGAAGTAGAAGGGAGGCTCTATTT 59.343 45.833 15.23 6.44 29.62 1.40
177 178 4.078278 AGGAAGTAGAAGGGAGGCTCTATT 60.078 45.833 15.23 9.37 0.00 1.73
178 179 3.469389 AGGAAGTAGAAGGGAGGCTCTAT 59.531 47.826 15.23 0.00 0.00 1.98
179 180 2.860041 AGGAAGTAGAAGGGAGGCTCTA 59.140 50.000 15.23 0.00 0.00 2.43
180 181 1.649100 AGGAAGTAGAAGGGAGGCTCT 59.351 52.381 15.23 0.00 0.00 4.09
181 182 2.036387 GAGGAAGTAGAAGGGAGGCTC 58.964 57.143 5.78 5.78 0.00 4.70
182 183 1.343580 GGAGGAAGTAGAAGGGAGGCT 60.344 57.143 0.00 0.00 0.00 4.58
183 184 1.124780 GGAGGAAGTAGAAGGGAGGC 58.875 60.000 0.00 0.00 0.00 4.70
184 185 1.342175 ACGGAGGAAGTAGAAGGGAGG 60.342 57.143 0.00 0.00 0.00 4.30
185 186 2.146920 ACGGAGGAAGTAGAAGGGAG 57.853 55.000 0.00 0.00 0.00 4.30
186 187 2.617840 AACGGAGGAAGTAGAAGGGA 57.382 50.000 0.00 0.00 0.00 4.20
187 188 2.832733 AGAAACGGAGGAAGTAGAAGGG 59.167 50.000 0.00 0.00 0.00 3.95
188 189 5.656213 TTAGAAACGGAGGAAGTAGAAGG 57.344 43.478 0.00 0.00 0.00 3.46
194 195 8.979534 AGACTTATATTTAGAAACGGAGGAAGT 58.020 33.333 0.00 0.00 0.00 3.01
195 196 9.819267 AAGACTTATATTTAGAAACGGAGGAAG 57.181 33.333 0.00 0.00 0.00 3.46
260 261 9.822185 AAGCAAATTGAGTGAAAATTTTACTCT 57.178 25.926 24.44 15.90 41.01 3.24
263 264 9.986833 ACAAAGCAAATTGAGTGAAAATTTTAC 57.013 25.926 2.75 3.33 35.55 2.01
267 268 9.328845 ACATACAAAGCAAATTGAGTGAAAATT 57.671 25.926 0.00 0.00 34.38 1.82
268 269 8.891671 ACATACAAAGCAAATTGAGTGAAAAT 57.108 26.923 0.00 0.00 34.38 1.82
269 270 9.243637 GTACATACAAAGCAAATTGAGTGAAAA 57.756 29.630 0.00 0.00 34.38 2.29
270 271 8.629158 AGTACATACAAAGCAAATTGAGTGAAA 58.371 29.630 0.00 0.00 34.38 2.69
271 272 8.165239 AGTACATACAAAGCAAATTGAGTGAA 57.835 30.769 0.00 0.00 34.38 3.18
272 273 7.094805 GGAGTACATACAAAGCAAATTGAGTGA 60.095 37.037 0.00 0.00 34.38 3.41
273 274 7.023575 GGAGTACATACAAAGCAAATTGAGTG 58.976 38.462 0.00 0.00 34.38 3.51
274 275 6.151144 GGGAGTACATACAAAGCAAATTGAGT 59.849 38.462 0.00 0.00 34.38 3.41
275 276 6.404734 GGGGAGTACATACAAAGCAAATTGAG 60.405 42.308 0.00 0.00 34.38 3.02
276 277 5.417580 GGGGAGTACATACAAAGCAAATTGA 59.582 40.000 0.00 0.00 34.38 2.57
277 278 5.394115 GGGGGAGTACATACAAAGCAAATTG 60.394 44.000 0.00 0.00 36.37 2.32
278 279 4.709886 GGGGGAGTACATACAAAGCAAATT 59.290 41.667 0.00 0.00 0.00 1.82
279 280 4.278310 GGGGGAGTACATACAAAGCAAAT 58.722 43.478 0.00 0.00 0.00 2.32
280 281 3.692690 GGGGGAGTACATACAAAGCAAA 58.307 45.455 0.00 0.00 0.00 3.68
281 282 2.355310 CGGGGGAGTACATACAAAGCAA 60.355 50.000 0.00 0.00 0.00 3.91
282 283 1.208535 CGGGGGAGTACATACAAAGCA 59.791 52.381 0.00 0.00 0.00 3.91
283 284 1.208776 ACGGGGGAGTACATACAAAGC 59.791 52.381 0.00 0.00 0.00 3.51
284 285 2.159000 GGACGGGGGAGTACATACAAAG 60.159 54.545 0.00 0.00 0.00 2.77
285 286 1.832998 GGACGGGGGAGTACATACAAA 59.167 52.381 0.00 0.00 0.00 2.83
286 287 1.488390 GGACGGGGGAGTACATACAA 58.512 55.000 0.00 0.00 0.00 2.41
287 288 0.397535 GGGACGGGGGAGTACATACA 60.398 60.000 0.00 0.00 0.00 2.29
288 289 0.397535 TGGGACGGGGGAGTACATAC 60.398 60.000 0.00 0.00 0.00 2.39
289 290 0.564171 ATGGGACGGGGGAGTACATA 59.436 55.000 0.00 0.00 0.00 2.29
290 291 0.564171 TATGGGACGGGGGAGTACAT 59.436 55.000 0.00 0.00 0.00 2.29
291 292 0.339162 TTATGGGACGGGGGAGTACA 59.661 55.000 0.00 0.00 0.00 2.90
292 293 1.725803 ATTATGGGACGGGGGAGTAC 58.274 55.000 0.00 0.00 0.00 2.73
293 294 3.858696 ATATTATGGGACGGGGGAGTA 57.141 47.619 0.00 0.00 0.00 2.59
294 295 2.735259 ATATTATGGGACGGGGGAGT 57.265 50.000 0.00 0.00 0.00 3.85
295 296 4.359105 TCTTATATTATGGGACGGGGGAG 58.641 47.826 0.00 0.00 0.00 4.30
296 297 4.423167 TCTTATATTATGGGACGGGGGA 57.577 45.455 0.00 0.00 0.00 4.81
297 298 5.710409 ATTCTTATATTATGGGACGGGGG 57.290 43.478 0.00 0.00 0.00 5.40
865 866 3.059051 GGTCGAGGCGTACTTATAGTCAG 60.059 52.174 0.00 0.00 0.00 3.51
869 872 1.196354 CGGGTCGAGGCGTACTTATAG 59.804 57.143 0.00 0.00 0.00 1.31
875 878 3.690108 GAACCGGGTCGAGGCGTAC 62.690 68.421 2.28 0.00 0.00 3.67
878 881 4.493747 GAGAACCGGGTCGAGGCG 62.494 72.222 15.29 0.00 0.00 5.52
918 922 1.200948 GCTTGCGGCTTCAGAAAAGAT 59.799 47.619 0.00 0.00 38.06 2.40
941 945 3.418068 GTCTGCGGTGTGCTCTGC 61.418 66.667 0.00 0.00 46.63 4.26
956 960 0.238553 GAAAGGGAAACTGCTGCGTC 59.761 55.000 0.00 0.00 0.00 5.19
960 964 2.575532 TGTCTGAAAGGGAAACTGCTG 58.424 47.619 0.00 0.00 0.00 4.41
979 991 4.963276 TGGTGGCTAATCGAAGAAAATG 57.037 40.909 0.00 0.00 43.58 2.32
1074 1092 4.000620 TAGGTCGGGTGGGAGGCA 62.001 66.667 0.00 0.00 0.00 4.75
1100 1118 0.038159 AGGAGAGGTTCAAACGCTCG 60.038 55.000 0.00 0.00 34.10 5.03
1159 1193 7.478322 CAAGATCGAAATCAAATCCAATCAGT 58.522 34.615 0.00 0.00 34.07 3.41
1596 6576 2.034066 CCTTGCGGGCCTTCTTGA 59.966 61.111 0.84 0.00 0.00 3.02
1621 6601 4.603989 TCAGATCAGATCAGATCAAGCC 57.396 45.455 24.89 3.77 45.39 4.35
1741 6739 0.105964 TTCCAGACACCACCAACGAG 59.894 55.000 0.00 0.00 0.00 4.18
1848 6886 6.740411 AGTACAACCAACTCGTAACAAAAA 57.260 33.333 0.00 0.00 0.00 1.94
1849 6887 6.455380 CGAAGTACAACCAACTCGTAACAAAA 60.455 38.462 0.00 0.00 0.00 2.44
1850 6888 5.005586 CGAAGTACAACCAACTCGTAACAAA 59.994 40.000 0.00 0.00 0.00 2.83
1851 6889 4.503734 CGAAGTACAACCAACTCGTAACAA 59.496 41.667 0.00 0.00 0.00 2.83
1852 6890 4.043750 CGAAGTACAACCAACTCGTAACA 58.956 43.478 0.00 0.00 0.00 2.41
1853 6891 4.290155 TCGAAGTACAACCAACTCGTAAC 58.710 43.478 0.00 0.00 0.00 2.50
1854 6892 4.566545 TCGAAGTACAACCAACTCGTAA 57.433 40.909 0.00 0.00 0.00 3.18
1855 6893 4.771590 ATCGAAGTACAACCAACTCGTA 57.228 40.909 0.00 0.00 0.00 3.43
1856 6894 3.655276 ATCGAAGTACAACCAACTCGT 57.345 42.857 0.00 0.00 0.00 4.18
1857 6895 4.557690 CAGTATCGAAGTACAACCAACTCG 59.442 45.833 0.00 0.00 0.00 4.18
1858 6896 5.706916 TCAGTATCGAAGTACAACCAACTC 58.293 41.667 0.00 0.00 0.00 3.01
1859 6897 5.710984 CTCAGTATCGAAGTACAACCAACT 58.289 41.667 0.00 0.00 0.00 3.16
1860 6898 4.326548 GCTCAGTATCGAAGTACAACCAAC 59.673 45.833 0.00 0.00 0.00 3.77
1861 6899 4.021807 TGCTCAGTATCGAAGTACAACCAA 60.022 41.667 0.00 0.00 0.00 3.67
1862 6900 3.508402 TGCTCAGTATCGAAGTACAACCA 59.492 43.478 0.00 0.00 0.00 3.67
1863 6901 4.106029 TGCTCAGTATCGAAGTACAACC 57.894 45.455 0.00 0.00 0.00 3.77
1864 6902 6.470160 CAAATGCTCAGTATCGAAGTACAAC 58.530 40.000 0.00 0.00 0.00 3.32
1865 6903 5.063438 GCAAATGCTCAGTATCGAAGTACAA 59.937 40.000 0.00 0.00 38.21 2.41
1866 6904 4.566759 GCAAATGCTCAGTATCGAAGTACA 59.433 41.667 0.00 0.00 38.21 2.90
1867 6905 4.317418 CGCAAATGCTCAGTATCGAAGTAC 60.317 45.833 3.63 0.00 39.32 2.73
1868 6906 3.796717 CGCAAATGCTCAGTATCGAAGTA 59.203 43.478 3.63 0.00 39.32 2.24
1869 6907 2.604914 CGCAAATGCTCAGTATCGAAGT 59.395 45.455 3.63 0.00 39.32 3.01
1870 6908 2.860136 TCGCAAATGCTCAGTATCGAAG 59.140 45.455 3.63 0.00 39.32 3.79
1871 6909 2.887337 TCGCAAATGCTCAGTATCGAA 58.113 42.857 3.63 0.00 39.32 3.71
1872 6910 2.577449 TCGCAAATGCTCAGTATCGA 57.423 45.000 3.63 0.00 39.32 3.59
1873 6911 2.156504 GGATCGCAAATGCTCAGTATCG 59.843 50.000 3.63 0.00 39.32 2.92
1877 6915 1.065926 TGAGGATCGCAAATGCTCAGT 60.066 47.619 13.99 0.00 40.70 3.41
1920 6989 2.719798 CCGCAACTGAACTTGAACAAG 58.280 47.619 12.22 12.22 43.79 3.16
1921 6990 1.202245 GCCGCAACTGAACTTGAACAA 60.202 47.619 0.00 0.00 0.00 2.83
1922 6991 0.380378 GCCGCAACTGAACTTGAACA 59.620 50.000 0.00 0.00 0.00 3.18
1923 6992 0.317854 GGCCGCAACTGAACTTGAAC 60.318 55.000 0.00 0.00 0.00 3.18
1924 6993 0.465460 AGGCCGCAACTGAACTTGAA 60.465 50.000 0.00 0.00 0.00 2.69
1925 6994 0.884704 GAGGCCGCAACTGAACTTGA 60.885 55.000 0.00 0.00 0.00 3.02
1926 6995 0.886490 AGAGGCCGCAACTGAACTTG 60.886 55.000 9.88 0.00 0.00 3.16
1927 6996 0.886490 CAGAGGCCGCAACTGAACTT 60.886 55.000 9.88 0.00 34.07 2.66
1928 6997 1.302033 CAGAGGCCGCAACTGAACT 60.302 57.895 9.88 0.00 34.07 3.01
1929 6998 2.328099 CCAGAGGCCGCAACTGAAC 61.328 63.158 9.88 0.00 34.07 3.18
1930 6999 2.032528 CCAGAGGCCGCAACTGAA 59.967 61.111 9.88 0.00 34.07 3.02
1931 7000 4.020617 CCCAGAGGCCGCAACTGA 62.021 66.667 9.88 0.00 34.07 3.41
1941 7010 2.111999 TTGTCGAACCTGCCCAGAGG 62.112 60.000 0.00 0.00 39.28 3.69
1942 7011 0.671781 CTTGTCGAACCTGCCCAGAG 60.672 60.000 0.00 0.00 0.00 3.35
1943 7012 1.118965 TCTTGTCGAACCTGCCCAGA 61.119 55.000 0.00 0.00 0.00 3.86
1944 7013 0.036010 ATCTTGTCGAACCTGCCCAG 60.036 55.000 0.00 0.00 0.00 4.45
1956 7025 0.807496 GCAGTGCCCTCAATCTTGTC 59.193 55.000 2.85 0.00 0.00 3.18
2001 7070 1.221021 GGTGATCGGGAGTTCCACC 59.779 63.158 0.00 0.00 37.91 4.61
2009 7078 0.326143 TGATTGAGGGGTGATCGGGA 60.326 55.000 0.00 0.00 0.00 5.14
2010 7079 0.546122 TTGATTGAGGGGTGATCGGG 59.454 55.000 0.00 0.00 0.00 5.14
2020 7089 4.096382 CCCCTCGTTTACAATTGATTGAGG 59.904 45.833 13.59 17.97 40.14 3.86
2021 7090 4.096382 CCCCCTCGTTTACAATTGATTGAG 59.904 45.833 13.59 10.86 40.14 3.02
2022 7091 4.013728 CCCCCTCGTTTACAATTGATTGA 58.986 43.478 13.59 1.83 40.14 2.57
2023 7092 3.761752 ACCCCCTCGTTTACAATTGATTG 59.238 43.478 13.59 2.29 43.26 2.67
2024 7093 4.042271 ACCCCCTCGTTTACAATTGATT 57.958 40.909 13.59 0.00 0.00 2.57
2025 7094 3.732048 ACCCCCTCGTTTACAATTGAT 57.268 42.857 13.59 0.00 0.00 2.57
2036 7105 2.363406 CCGTTCCTACCCCCTCGT 60.363 66.667 0.00 0.00 0.00 4.18
2037 7106 3.846430 GCCGTTCCTACCCCCTCG 61.846 72.222 0.00 0.00 0.00 4.63
2044 7114 2.202531 GTCGACCGCCGTTCCTAC 60.203 66.667 3.51 0.00 39.75 3.18
2147 8642 3.967332 TCATGTGATTCTCTCTGCACA 57.033 42.857 0.00 0.00 44.31 4.57
2204 8699 4.927782 GACGGGCAGCCACACACA 62.928 66.667 15.19 0.00 0.00 3.72
2232 8729 1.614241 AAGCGCGGGATTAGTGGAGT 61.614 55.000 8.83 0.00 0.00 3.85
2283 8780 1.789054 CGCGCTTTTAATTGGGACGTC 60.789 52.381 7.13 7.13 0.00 4.34
2290 8788 2.689635 CGGACTACGCGCTTTTAATTG 58.310 47.619 5.73 0.00 34.82 2.32
2324 8822 4.335594 GGGTTAGATGTGAAAAAGATCGGG 59.664 45.833 0.00 0.00 0.00 5.14
2400 8904 1.081840 GCTTCGTTGTGCTTCTGCC 60.082 57.895 0.00 0.00 38.71 4.85
2404 8908 0.383124 GTGTCGCTTCGTTGTGCTTC 60.383 55.000 0.00 0.00 0.00 3.86
2405 8909 1.641677 GTGTCGCTTCGTTGTGCTT 59.358 52.632 0.00 0.00 0.00 3.91
2419 8923 1.563173 GTGGAAAGCGACACGTGTC 59.437 57.895 33.76 33.76 41.47 3.67
2420 8924 1.885850 GGTGGAAAGCGACACGTGT 60.886 57.895 23.64 23.64 38.46 4.49
2422 8926 0.319083 TATGGTGGAAAGCGACACGT 59.681 50.000 0.00 0.00 38.46 4.49
2429 8933 5.043737 TGTAATAGGGTATGGTGGAAAGC 57.956 43.478 0.00 0.00 0.00 3.51
2430 8934 7.948034 TTTTGTAATAGGGTATGGTGGAAAG 57.052 36.000 0.00 0.00 0.00 2.62
2431 8935 7.896496 ACATTTTGTAATAGGGTATGGTGGAAA 59.104 33.333 0.00 0.00 0.00 3.13
2432 8936 7.415086 ACATTTTGTAATAGGGTATGGTGGAA 58.585 34.615 0.00 0.00 0.00 3.53
2433 8937 6.975949 ACATTTTGTAATAGGGTATGGTGGA 58.024 36.000 0.00 0.00 0.00 4.02
2434 8938 7.776030 TGTACATTTTGTAATAGGGTATGGTGG 59.224 37.037 0.00 0.00 34.21 4.61
2435 8939 8.617809 GTGTACATTTTGTAATAGGGTATGGTG 58.382 37.037 0.00 0.00 34.21 4.17
2436 8940 7.496591 CGTGTACATTTTGTAATAGGGTATGGT 59.503 37.037 0.00 0.00 34.21 3.55
2437 8941 7.496591 ACGTGTACATTTTGTAATAGGGTATGG 59.503 37.037 0.00 0.00 34.21 2.74
2438 8942 8.332464 CACGTGTACATTTTGTAATAGGGTATG 58.668 37.037 7.58 0.00 34.21 2.39
2439 8943 8.042515 ACACGTGTACATTTTGTAATAGGGTAT 58.957 33.333 21.98 0.00 34.21 2.73
2440 8944 7.331440 CACACGTGTACATTTTGTAATAGGGTA 59.669 37.037 22.90 0.00 34.21 3.69
2441 8945 6.148150 CACACGTGTACATTTTGTAATAGGGT 59.852 38.462 22.90 0.00 34.21 4.34
2442 8946 6.402766 CCACACGTGTACATTTTGTAATAGGG 60.403 42.308 22.90 8.51 34.21 3.53
2443 8947 6.402766 CCCACACGTGTACATTTTGTAATAGG 60.403 42.308 22.90 12.57 34.21 2.57
2444 8948 6.539324 CCCACACGTGTACATTTTGTAATAG 58.461 40.000 22.90 3.30 34.21 1.73
2445 8949 5.106634 GCCCACACGTGTACATTTTGTAATA 60.107 40.000 22.90 0.00 34.21 0.98
2446 8950 4.320641 GCCCACACGTGTACATTTTGTAAT 60.321 41.667 22.90 0.00 34.21 1.89
2447 8951 3.003482 GCCCACACGTGTACATTTTGTAA 59.997 43.478 22.90 0.00 34.21 2.41
2448 8952 2.548904 GCCCACACGTGTACATTTTGTA 59.451 45.455 22.90 0.00 0.00 2.41
2449 8953 1.335496 GCCCACACGTGTACATTTTGT 59.665 47.619 22.90 0.00 0.00 2.83
2450 8954 1.335182 TGCCCACACGTGTACATTTTG 59.665 47.619 22.90 7.00 0.00 2.44
2451 8955 1.606668 CTGCCCACACGTGTACATTTT 59.393 47.619 22.90 0.00 0.00 1.82
2452 8956 1.234821 CTGCCCACACGTGTACATTT 58.765 50.000 22.90 0.00 0.00 2.32
2453 8957 0.605319 CCTGCCCACACGTGTACATT 60.605 55.000 22.90 0.00 0.00 2.71
2454 8958 1.003839 CCTGCCCACACGTGTACAT 60.004 57.895 22.90 0.00 0.00 2.29
2455 8959 2.372040 GACCTGCCCACACGTGTACA 62.372 60.000 22.90 18.09 0.00 2.90
2456 8960 1.666872 GACCTGCCCACACGTGTAC 60.667 63.158 22.90 14.32 0.00 2.90
2457 8961 2.134933 TGACCTGCCCACACGTGTA 61.135 57.895 22.90 4.58 0.00 2.90
2458 8962 3.475494 TGACCTGCCCACACGTGT 61.475 61.111 17.22 17.22 0.00 4.49
2459 8963 2.972505 GTGACCTGCCCACACGTG 60.973 66.667 15.48 15.48 34.81 4.49
2460 8964 3.460672 CTGTGACCTGCCCACACGT 62.461 63.158 0.00 0.00 39.36 4.49
2461 8965 2.666190 CTGTGACCTGCCCACACG 60.666 66.667 0.00 0.00 39.36 4.49
2462 8966 2.980233 GCTGTGACCTGCCCACAC 60.980 66.667 0.00 0.00 39.36 3.82
2463 8967 3.170672 AGCTGTGACCTGCCCACA 61.171 61.111 0.00 0.00 41.68 4.17
2464 8968 2.670934 CAGCTGTGACCTGCCCAC 60.671 66.667 5.25 0.00 36.27 4.61
2469 8973 2.359602 CCTGGCAGCTGTGACCTG 60.360 66.667 16.64 11.66 0.00 4.00
2470 8974 2.851102 ACCTGGCAGCTGTGACCT 60.851 61.111 16.64 0.00 0.00 3.85
2471 8975 2.670934 CACCTGGCAGCTGTGACC 60.671 66.667 16.64 8.81 31.66 4.02
2472 8976 2.111878 ACACCTGGCAGCTGTGAC 59.888 61.111 24.58 6.91 34.18 3.67
2473 8977 2.111669 CACACCTGGCAGCTGTGA 59.888 61.111 30.29 0.74 38.02 3.58
2474 8978 2.203252 ACACACCTGGCAGCTGTG 60.203 61.111 31.47 31.47 40.98 3.66
2475 8979 2.111878 GACACACCTGGCAGCTGT 59.888 61.111 16.64 9.60 0.00 4.40
2476 8980 2.111669 TGACACACCTGGCAGCTG 59.888 61.111 10.11 10.11 29.18 4.24
2477 8981 1.987807 AAGTGACACACCTGGCAGCT 61.988 55.000 9.56 0.00 35.42 4.24
2478 8982 0.250295 TAAGTGACACACCTGGCAGC 60.250 55.000 9.56 0.00 35.42 5.25
2479 8983 1.344438 TCTAAGTGACACACCTGGCAG 59.656 52.381 7.75 7.75 35.42 4.85
2480 8984 1.344438 CTCTAAGTGACACACCTGGCA 59.656 52.381 8.59 0.00 34.49 4.92
2481 8985 1.941668 GCTCTAAGTGACACACCTGGC 60.942 57.143 8.59 2.99 34.49 4.85
2482 8986 1.344438 TGCTCTAAGTGACACACCTGG 59.656 52.381 8.59 0.00 34.49 4.45
2483 8987 2.820059 TGCTCTAAGTGACACACCTG 57.180 50.000 8.59 0.00 34.49 4.00
2484 8988 3.169099 AGATGCTCTAAGTGACACACCT 58.831 45.455 8.59 0.00 34.49 4.00
2485 8989 3.601443 AGATGCTCTAAGTGACACACC 57.399 47.619 8.59 0.00 34.49 4.16
2486 8990 5.060662 TGTAGATGCTCTAAGTGACACAC 57.939 43.478 8.59 0.00 29.58 3.82
2487 8991 4.380973 GCTGTAGATGCTCTAAGTGACACA 60.381 45.833 8.59 0.00 29.58 3.72
2488 8992 4.109050 GCTGTAGATGCTCTAAGTGACAC 58.891 47.826 0.00 0.00 29.58 3.67
2489 8993 3.131223 GGCTGTAGATGCTCTAAGTGACA 59.869 47.826 0.00 0.00 29.58 3.58
2490 8994 3.712187 GGCTGTAGATGCTCTAAGTGAC 58.288 50.000 0.00 0.00 29.58 3.67
2491 8995 2.359214 CGGCTGTAGATGCTCTAAGTGA 59.641 50.000 0.00 0.00 29.58 3.41
2492 8996 2.544694 CCGGCTGTAGATGCTCTAAGTG 60.545 54.545 0.00 0.00 29.58 3.16
2493 8997 1.683917 CCGGCTGTAGATGCTCTAAGT 59.316 52.381 0.00 0.00 29.58 2.24
2494 8998 1.000283 CCCGGCTGTAGATGCTCTAAG 60.000 57.143 0.00 0.00 29.58 2.18
2495 8999 1.040646 CCCGGCTGTAGATGCTCTAA 58.959 55.000 0.00 0.00 29.58 2.10
2496 9000 1.464376 GCCCGGCTGTAGATGCTCTA 61.464 60.000 0.71 0.00 0.00 2.43
2497 9001 2.801631 GCCCGGCTGTAGATGCTCT 61.802 63.158 0.71 0.00 0.00 4.09
2498 9002 2.280457 GCCCGGCTGTAGATGCTC 60.280 66.667 0.71 0.00 0.00 4.26
2499 9003 4.227134 CGCCCGGCTGTAGATGCT 62.227 66.667 8.05 0.00 0.00 3.79
2514 9018 3.577313 GAGGCGGATTTGAGGCGC 61.577 66.667 0.00 0.00 38.03 6.53
2515 9019 0.249868 TATGAGGCGGATTTGAGGCG 60.250 55.000 0.00 0.00 38.03 5.52
2516 9020 1.230324 GTATGAGGCGGATTTGAGGC 58.770 55.000 0.00 0.00 0.00 4.70
2517 9021 1.202533 ACGTATGAGGCGGATTTGAGG 60.203 52.381 0.00 0.00 0.00 3.86
2518 9022 2.128035 GACGTATGAGGCGGATTTGAG 58.872 52.381 0.00 0.00 0.00 3.02
2519 9023 1.202486 GGACGTATGAGGCGGATTTGA 60.202 52.381 0.00 0.00 0.00 2.69
2520 9024 1.217882 GGACGTATGAGGCGGATTTG 58.782 55.000 0.00 0.00 0.00 2.32
2521 9025 0.249322 CGGACGTATGAGGCGGATTT 60.249 55.000 0.00 0.00 0.00 2.17
2522 9026 1.362717 CGGACGTATGAGGCGGATT 59.637 57.895 0.00 0.00 0.00 3.01
2523 9027 2.561956 CCGGACGTATGAGGCGGAT 61.562 63.158 0.00 0.00 0.00 4.18
2524 9028 3.214123 CCGGACGTATGAGGCGGA 61.214 66.667 0.00 0.00 0.00 5.54
2525 9029 4.280494 CCCGGACGTATGAGGCGG 62.280 72.222 0.73 0.00 0.00 6.13
2526 9030 4.944372 GCCCGGACGTATGAGGCG 62.944 72.222 0.73 0.00 33.18 5.52
2527 9031 3.792053 CTGCCCGGACGTATGAGGC 62.792 68.421 0.73 10.54 44.13 4.70
2528 9032 2.417516 CTGCCCGGACGTATGAGG 59.582 66.667 0.73 0.00 0.00 3.86
2529 9033 2.417516 CCTGCCCGGACGTATGAG 59.582 66.667 0.73 0.00 33.16 2.90
2530 9034 3.845259 GCCTGCCCGGACGTATGA 61.845 66.667 0.73 0.00 33.16 2.15
2531 9035 4.910585 GGCCTGCCCGGACGTATG 62.911 72.222 0.73 0.00 33.16 2.39
2553 9057 2.748058 ATTGTGACCGGGCAGTGTCC 62.748 60.000 12.52 2.76 0.00 4.02
2554 9058 0.889186 AATTGTGACCGGGCAGTGTC 60.889 55.000 12.52 0.00 0.00 3.67
2555 9059 0.467290 AAATTGTGACCGGGCAGTGT 60.467 50.000 12.52 0.00 0.00 3.55
2556 9060 0.673437 AAAATTGTGACCGGGCAGTG 59.327 50.000 12.52 0.00 0.00 3.66
2557 9061 1.408969 AAAAATTGTGACCGGGCAGT 58.591 45.000 12.52 0.00 0.00 4.40
2578 9082 1.262640 TTTGAGGGGCCGTCTAGGTC 61.263 60.000 25.16 0.61 46.15 3.85
2579 9083 1.229400 TTTGAGGGGCCGTCTAGGT 60.229 57.895 25.16 0.00 43.70 3.08
2580 9084 1.221021 GTTTGAGGGGCCGTCTAGG 59.779 63.158 25.16 0.00 44.97 3.02
2581 9085 1.136500 GTAGTTTGAGGGGCCGTCTAG 59.864 57.143 25.16 0.00 0.00 2.43
2582 9086 1.188863 GTAGTTTGAGGGGCCGTCTA 58.811 55.000 25.16 16.38 0.00 2.59
2583 9087 1.551019 GGTAGTTTGAGGGGCCGTCT 61.551 60.000 25.16 9.13 0.00 4.18
2584 9088 1.078637 GGTAGTTTGAGGGGCCGTC 60.079 63.158 19.10 19.10 0.00 4.79
2585 9089 1.538135 AGGTAGTTTGAGGGGCCGT 60.538 57.895 0.00 0.00 0.00 5.68
2586 9090 1.078426 CAGGTAGTTTGAGGGGCCG 60.078 63.158 0.00 0.00 0.00 6.13
2587 9091 1.303282 CCAGGTAGTTTGAGGGGCC 59.697 63.158 0.00 0.00 0.00 5.80
2588 9092 1.378646 GCCAGGTAGTTTGAGGGGC 60.379 63.158 0.00 0.00 0.00 5.80
2589 9093 1.303282 GGCCAGGTAGTTTGAGGGG 59.697 63.158 0.00 0.00 0.00 4.79
2590 9094 0.404040 TTGGCCAGGTAGTTTGAGGG 59.596 55.000 5.11 0.00 0.00 4.30
2591 9095 1.886542 GTTTGGCCAGGTAGTTTGAGG 59.113 52.381 5.11 0.00 0.00 3.86
2592 9096 1.535462 CGTTTGGCCAGGTAGTTTGAG 59.465 52.381 5.11 0.00 0.00 3.02
2593 9097 1.600023 CGTTTGGCCAGGTAGTTTGA 58.400 50.000 5.11 0.00 0.00 2.69
2594 9098 0.596082 CCGTTTGGCCAGGTAGTTTG 59.404 55.000 5.11 0.00 0.00 2.93
2595 9099 0.538746 CCCGTTTGGCCAGGTAGTTT 60.539 55.000 5.11 0.00 0.00 2.66
2596 9100 1.074248 CCCGTTTGGCCAGGTAGTT 59.926 57.895 5.11 0.00 0.00 2.24
2597 9101 2.754375 CCCGTTTGGCCAGGTAGT 59.246 61.111 5.11 0.00 0.00 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.