Multiple sequence alignment - TraesCS2D01G394200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G394200 chr2D 100.000 4194 0 0 1 4194 505813460 505817653 0.000000e+00 7745.0
1 TraesCS2D01G394200 chr2D 99.215 382 3 0 3813 4194 598291323 598290942 0.000000e+00 689.0
2 TraesCS2D01G394200 chr2B 92.240 3621 142 45 251 3778 592801246 592804820 0.000000e+00 5001.0
3 TraesCS2D01G394200 chr2B 89.744 156 7 5 25 177 592801089 592801238 1.540000e-44 191.0
4 TraesCS2D01G394200 chr2A 90.510 3667 180 63 244 3778 650242832 650246462 0.000000e+00 4689.0
5 TraesCS2D01G394200 chr6D 99.215 382 3 0 3813 4194 290842898 290842517 0.000000e+00 689.0
6 TraesCS2D01G394200 chr5D 99.215 382 3 0 3813 4194 43964091 43964472 0.000000e+00 689.0
7 TraesCS2D01G394200 chr4D 99.215 382 3 0 3813 4194 19679466 19679847 0.000000e+00 689.0
8 TraesCS2D01G394200 chr4D 99.215 382 3 0 3813 4194 488033678 488033297 0.000000e+00 689.0
9 TraesCS2D01G394200 chr4D 97.975 395 5 3 3802 4194 333058061 333057668 0.000000e+00 682.0
10 TraesCS2D01G394200 chr4D 97.722 395 8 1 3800 4194 442161786 442161393 0.000000e+00 678.0
11 TraesCS2D01G394200 chr4D 72.449 686 149 32 2319 2978 34090002 34090673 2.580000e-42 183.0
12 TraesCS2D01G394200 chr4D 82.906 117 18 2 1051 1166 34089121 34089236 2.060000e-18 104.0
13 TraesCS2D01G394200 chr3D 99.215 382 3 0 3813 4194 491627753 491628134 0.000000e+00 689.0
14 TraesCS2D01G394200 chr1D 99.215 382 3 0 3813 4194 463252668 463253049 0.000000e+00 689.0
15 TraesCS2D01G394200 chr4B 72.635 687 146 32 2319 2978 48992556 48993227 5.540000e-44 189.0
16 TraesCS2D01G394200 chr4B 81.356 118 18 4 1051 1166 48991658 48991773 4.460000e-15 93.5
17 TraesCS2D01G394200 chr4A 83.193 119 16 4 1051 1167 568192967 568193083 5.730000e-19 106.0
18 TraesCS2D01G394200 chr3B 82.051 117 15 5 1048 1161 99500818 99500931 1.240000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G394200 chr2D 505813460 505817653 4193 False 7745 7745 100.000 1 4194 1 chr2D.!!$F1 4193
1 TraesCS2D01G394200 chr2B 592801089 592804820 3731 False 2596 5001 90.992 25 3778 2 chr2B.!!$F1 3753
2 TraesCS2D01G394200 chr2A 650242832 650246462 3630 False 4689 4689 90.510 244 3778 1 chr2A.!!$F1 3534

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
344 354 0.036010 CCAACTCAACCCATCGAGCT 60.036 55.0 0.00 0.0 32.21 4.09 F
1171 1231 0.179181 CGAGAACCAAGTACGCGCTA 60.179 55.0 5.73 0.0 0.00 4.26 F
1398 1464 0.600557 AGTTCAGACAGGTGAGCTCG 59.399 55.0 9.64 0.0 33.06 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1719 1788 0.400213 TCAAGGGGTTGACGAAGCAT 59.600 50.0 0.00 0.0 0.0 3.79 R
2329 2437 0.541863 ACGGGTTGGTGATGAGGATC 59.458 55.0 0.00 0.0 0.0 3.36 R
3293 3407 0.968405 AAAACAATCGCATGCACCCT 59.032 45.0 19.57 0.0 0.0 4.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 9.542462 TCAAACTCCGTCTCATAATATAAAAGG 57.458 33.333 0.00 0.00 0.00 3.11
46 47 9.326413 CAAACTCCGTCTCATAATATAAAAGGT 57.674 33.333 0.00 0.00 0.00 3.50
47 48 9.901172 AAACTCCGTCTCATAATATAAAAGGTT 57.099 29.630 0.00 0.00 0.00 3.50
78 79 1.118838 CACTAGAGCTTGGAGGAGGG 58.881 60.000 0.00 0.00 0.00 4.30
79 80 1.011595 ACTAGAGCTTGGAGGAGGGA 58.988 55.000 0.00 0.00 0.00 4.20
107 111 1.737371 CGTTGCGGCCAAATTGCAT 60.737 52.632 2.24 0.00 38.60 3.96
108 112 0.457509 CGTTGCGGCCAAATTGCATA 60.458 50.000 2.24 0.00 38.60 3.14
109 113 1.280066 GTTGCGGCCAAATTGCATAG 58.720 50.000 2.24 0.00 38.60 2.23
110 114 0.894141 TTGCGGCCAAATTGCATAGT 59.106 45.000 2.24 0.00 38.60 2.12
120 124 5.331902 CCAAATTGCATAGTACCAGTTTCG 58.668 41.667 0.00 0.00 0.00 3.46
126 130 3.448686 CATAGTACCAGTTTCGAGGCAG 58.551 50.000 0.00 0.00 0.00 4.85
132 136 2.026822 ACCAGTTTCGAGGCAGATTCAT 60.027 45.455 0.00 0.00 0.00 2.57
177 181 5.689383 AAATTAACTGCTGCTTTCTCGAA 57.311 34.783 0.00 0.00 0.00 3.71
178 182 4.670227 ATTAACTGCTGCTTTCTCGAAC 57.330 40.909 0.00 0.00 0.00 3.95
180 184 0.603975 ACTGCTGCTTTCTCGAACCC 60.604 55.000 0.00 0.00 0.00 4.11
181 185 0.321122 CTGCTGCTTTCTCGAACCCT 60.321 55.000 0.00 0.00 0.00 4.34
182 186 0.320771 TGCTGCTTTCTCGAACCCTC 60.321 55.000 0.00 0.00 0.00 4.30
184 188 0.737715 CTGCTTTCTCGAACCCTCCG 60.738 60.000 0.00 0.00 0.00 4.63
185 189 1.183030 TGCTTTCTCGAACCCTCCGA 61.183 55.000 0.00 0.00 34.61 4.55
186 190 0.037605 GCTTTCTCGAACCCTCCGAA 60.038 55.000 0.00 0.00 35.48 4.30
187 191 1.405661 GCTTTCTCGAACCCTCCGAAT 60.406 52.381 0.00 0.00 35.48 3.34
188 192 2.935676 GCTTTCTCGAACCCTCCGAATT 60.936 50.000 0.00 0.00 35.48 2.17
189 193 3.335579 CTTTCTCGAACCCTCCGAATTT 58.664 45.455 0.00 0.00 35.48 1.82
190 194 4.501071 CTTTCTCGAACCCTCCGAATTTA 58.499 43.478 0.00 0.00 35.48 1.40
191 195 4.748277 TTCTCGAACCCTCCGAATTTAT 57.252 40.909 0.00 0.00 35.48 1.40
192 196 4.317671 TCTCGAACCCTCCGAATTTATC 57.682 45.455 0.00 0.00 35.48 1.75
201 205 1.278637 CGAATTTATCGTGGGCGGC 59.721 57.895 0.00 0.00 46.52 6.53
202 206 1.433053 CGAATTTATCGTGGGCGGCA 61.433 55.000 12.47 0.00 46.52 5.69
203 207 0.307760 GAATTTATCGTGGGCGGCAG 59.692 55.000 12.47 1.09 38.89 4.85
204 208 1.101049 AATTTATCGTGGGCGGCAGG 61.101 55.000 12.47 3.01 38.89 4.85
205 209 4.849310 TTATCGTGGGCGGCAGGC 62.849 66.667 12.47 0.57 42.96 4.85
234 238 4.256813 GGTGGTCGAACCGAGTTC 57.743 61.111 0.00 6.68 42.58 3.01
235 239 1.373873 GGTGGTCGAACCGAGTTCC 60.374 63.158 0.00 0.00 42.58 3.62
236 240 1.364901 GTGGTCGAACCGAGTTCCA 59.635 57.895 0.00 0.00 42.58 3.53
237 241 0.942884 GTGGTCGAACCGAGTTCCAC 60.943 60.000 0.00 10.40 42.58 4.02
238 242 1.373873 GGTCGAACCGAGTTCCACC 60.374 63.158 14.28 14.28 43.86 4.61
239 243 1.373873 GTCGAACCGAGTTCCACCC 60.374 63.158 10.07 0.00 39.14 4.61
240 244 1.532316 TCGAACCGAGTTCCACCCT 60.532 57.895 10.07 0.00 39.14 4.34
241 245 1.117142 TCGAACCGAGTTCCACCCTT 61.117 55.000 10.07 0.00 39.14 3.95
242 246 0.669625 CGAACCGAGTTCCACCCTTC 60.670 60.000 10.07 0.00 39.14 3.46
248 252 0.322008 GAGTTCCACCCTTCCTGCTG 60.322 60.000 0.00 0.00 0.00 4.41
257 261 1.197430 CCTTCCTGCTGGTCAGTCCT 61.197 60.000 9.73 0.00 41.25 3.85
344 354 0.036010 CCAACTCAACCCATCGAGCT 60.036 55.000 0.00 0.00 32.21 4.09
530 544 1.080093 GTCACGTCGCCTTGGATCA 60.080 57.895 0.00 0.00 0.00 2.92
533 547 0.740868 CACGTCGCCTTGGATCACAT 60.741 55.000 0.00 0.00 0.00 3.21
538 552 3.859961 CGTCGCCTTGGATCACATATATC 59.140 47.826 0.00 0.00 0.00 1.63
543 557 5.189180 GCCTTGGATCACATATATCCTTCC 58.811 45.833 4.91 0.00 42.94 3.46
544 558 5.749462 CCTTGGATCACATATATCCTTCCC 58.251 45.833 4.91 0.00 42.94 3.97
632 670 4.871910 CTGGCCCAGCTAGCTGCC 62.872 72.222 34.82 32.30 44.23 4.85
650 688 2.586792 GCATCTTCGGCTCCACCT 59.413 61.111 0.00 0.00 35.61 4.00
705 743 1.082104 GCGTATATGCCAAAGCGCC 60.082 57.895 2.29 0.00 44.31 6.53
717 759 0.893727 AAAGCGCCGTCCCATTTCTT 60.894 50.000 2.29 0.00 0.00 2.52
723 765 1.369625 CCGTCCCATTTCTTTCTCGG 58.630 55.000 0.00 0.00 0.00 4.63
939 987 3.889815 CATAACATTCTTGGCCTCTCCA 58.110 45.455 3.32 0.00 44.85 3.86
980 1040 1.892474 CTCAGCTAGCTACCAGATCCC 59.108 57.143 18.86 0.00 0.00 3.85
1167 1227 2.442188 CGCCGAGAACCAAGTACGC 61.442 63.158 0.00 0.00 0.00 4.42
1170 1230 1.443872 CGAGAACCAAGTACGCGCT 60.444 57.895 5.73 0.00 0.00 5.92
1171 1231 0.179181 CGAGAACCAAGTACGCGCTA 60.179 55.000 5.73 0.00 0.00 4.26
1172 1232 1.533338 CGAGAACCAAGTACGCGCTAT 60.533 52.381 5.73 0.00 0.00 2.97
1206 1269 9.341899 CCTTGTTTAACACAGCAGTAATATTTC 57.658 33.333 0.00 0.00 36.48 2.17
1215 1278 7.394359 ACACAGCAGTAATATTTCTTGTCCATT 59.606 33.333 0.00 0.00 0.00 3.16
1231 1297 3.612423 GTCCATTTTTCGCCATTAAGCAC 59.388 43.478 0.00 0.00 0.00 4.40
1398 1464 0.600557 AGTTCAGACAGGTGAGCTCG 59.399 55.000 9.64 0.00 33.06 5.03
1399 1465 1.011451 GTTCAGACAGGTGAGCTCGC 61.011 60.000 19.20 19.20 0.00 5.03
1420 1487 1.185315 GCACCCACCAGCACAAATAT 58.815 50.000 0.00 0.00 0.00 1.28
1429 1496 4.919168 CACCAGCACAAATATGACAAACTG 59.081 41.667 0.00 0.00 0.00 3.16
1435 1502 1.102978 AATATGACAAACTGGCCGGC 58.897 50.000 21.18 21.18 0.00 6.13
1719 1788 1.477553 CTTACTACCCAGGGTACGCA 58.522 55.000 15.22 0.00 37.09 5.24
1720 1789 2.037144 CTTACTACCCAGGGTACGCAT 58.963 52.381 15.22 3.42 37.09 4.73
1721 1790 1.405872 TACTACCCAGGGTACGCATG 58.594 55.000 15.22 7.27 37.09 4.06
1722 1791 1.227556 CTACCCAGGGTACGCATGC 60.228 63.158 15.22 7.91 37.09 4.06
1764 1837 1.271325 ACTGAATTCGGTGCATGTCCA 60.271 47.619 19.20 0.00 33.47 4.02
1953 2036 7.891561 TCCGTGATAAAATCAAATCCAAGTTT 58.108 30.769 0.00 0.00 41.69 2.66
1954 2037 8.364142 TCCGTGATAAAATCAAATCCAAGTTTT 58.636 29.630 0.00 0.00 41.69 2.43
1955 2038 8.987890 CCGTGATAAAATCAAATCCAAGTTTTT 58.012 29.630 0.00 0.00 41.69 1.94
1956 2039 9.796062 CGTGATAAAATCAAATCCAAGTTTTTG 57.204 29.630 0.00 0.00 41.69 2.44
1979 2080 6.913170 TGGCTTAATGTCTTCAAGTTGAATC 58.087 36.000 18.35 14.34 35.59 2.52
1981 2082 6.348540 GGCTTAATGTCTTCAAGTTGAATCGT 60.349 38.462 18.35 12.70 35.59 3.73
1986 2087 4.275689 TGTCTTCAAGTTGAATCGTGCAAT 59.724 37.500 18.35 0.00 35.59 3.56
1992 2093 3.599343 AGTTGAATCGTGCAATCTAGCA 58.401 40.909 0.00 0.00 43.35 3.49
2057 2160 2.000447 GCATGTTAACGTCTCTGACCC 59.000 52.381 0.00 0.00 0.00 4.46
2174 2282 1.358725 GCCTGACGTATGCGCTTTCA 61.359 55.000 9.73 2.27 42.83 2.69
2647 2755 1.372087 GCAAGATGTCCAGCTTCGGG 61.372 60.000 0.00 0.00 34.42 5.14
2710 2818 1.519455 GGACGAGGAGTTCATGGCG 60.519 63.158 0.00 0.00 0.00 5.69
3094 3202 2.667418 CACCTCCACCTCAGCCTG 59.333 66.667 0.00 0.00 0.00 4.85
3181 3289 3.303189 CAGTCTCCGCTGGTCCAT 58.697 61.111 0.00 0.00 33.11 3.41
3201 3310 2.579787 CGCCAGCTAAGTCGGTCG 60.580 66.667 0.00 0.00 0.00 4.79
3203 3312 2.202756 CCAGCTAAGTCGGTCGCC 60.203 66.667 0.00 0.00 0.00 5.54
3224 3333 3.112709 GTCGGTCAAGTGAGCCGC 61.113 66.667 13.90 8.25 44.58 6.53
3312 3430 0.968405 AGGGTGCATGCGATTGTTTT 59.032 45.000 14.09 0.00 0.00 2.43
3330 3448 4.226761 GTTTTGGAAGGTTTAGACATGCG 58.773 43.478 0.00 0.00 0.00 4.73
3350 3478 2.347939 CGAAATGCAGCATGTAGTAGCG 60.348 50.000 9.18 0.00 39.31 4.26
3482 3614 3.724508 TCAAGGCTTCTCGATCAGATC 57.275 47.619 0.00 0.00 0.00 2.75
3500 3632 9.262358 GATCAGATCCTGTAATAAACTTGTACC 57.738 37.037 0.00 0.00 32.61 3.34
3522 3658 4.330074 CCGAGGTACAAGATTGATGTTGTC 59.670 45.833 9.44 3.38 42.40 3.18
3550 3701 2.087501 TGTTGTACCACATACCGCAG 57.912 50.000 0.00 0.00 32.16 5.18
3658 3816 4.519147 CATGACGATGACGACTACTACTG 58.481 47.826 0.00 0.00 42.66 2.74
3784 3945 3.616956 TTGCTCTCCAACTCCATGTAG 57.383 47.619 0.00 0.00 0.00 2.74
3785 3946 2.540383 TGCTCTCCAACTCCATGTAGT 58.460 47.619 0.00 0.00 0.00 2.73
3786 3947 2.497675 TGCTCTCCAACTCCATGTAGTC 59.502 50.000 0.00 0.00 0.00 2.59
3787 3948 2.497675 GCTCTCCAACTCCATGTAGTCA 59.502 50.000 0.00 0.00 0.00 3.41
3788 3949 3.430098 GCTCTCCAACTCCATGTAGTCAG 60.430 52.174 0.00 0.00 0.00 3.51
3789 3950 4.019858 CTCTCCAACTCCATGTAGTCAGA 58.980 47.826 0.00 0.00 0.00 3.27
3790 3951 4.416516 TCTCCAACTCCATGTAGTCAGAA 58.583 43.478 0.00 0.00 0.00 3.02
3791 3952 5.026121 TCTCCAACTCCATGTAGTCAGAAT 58.974 41.667 0.00 0.00 0.00 2.40
3792 3953 6.194967 TCTCCAACTCCATGTAGTCAGAATA 58.805 40.000 0.00 0.00 0.00 1.75
3793 3954 6.322456 TCTCCAACTCCATGTAGTCAGAATAG 59.678 42.308 0.00 0.00 0.00 1.73
3794 3955 5.363868 TCCAACTCCATGTAGTCAGAATAGG 59.636 44.000 0.00 0.00 0.00 2.57
3795 3956 5.453903 CCAACTCCATGTAGTCAGAATAGGG 60.454 48.000 0.00 0.00 0.00 3.53
3796 3957 3.643792 ACTCCATGTAGTCAGAATAGGGC 59.356 47.826 0.00 0.00 0.00 5.19
3797 3958 2.972713 TCCATGTAGTCAGAATAGGGCC 59.027 50.000 0.00 0.00 0.00 5.80
3798 3959 2.039084 CCATGTAGTCAGAATAGGGCCC 59.961 54.545 16.46 16.46 0.00 5.80
3799 3960 2.868964 TGTAGTCAGAATAGGGCCCT 57.131 50.000 31.35 31.35 0.00 5.19
3800 3961 2.398588 TGTAGTCAGAATAGGGCCCTG 58.601 52.381 35.81 18.59 0.00 4.45
3801 3962 2.292918 TGTAGTCAGAATAGGGCCCTGT 60.293 50.000 35.81 26.87 0.00 4.00
3802 3963 1.207791 AGTCAGAATAGGGCCCTGTG 58.792 55.000 35.81 24.05 0.00 3.66
3803 3964 0.181350 GTCAGAATAGGGCCCTGTGG 59.819 60.000 35.81 20.26 0.00 4.17
3804 3965 0.253160 TCAGAATAGGGCCCTGTGGT 60.253 55.000 35.81 14.32 0.00 4.16
3805 3966 1.009060 TCAGAATAGGGCCCTGTGGTA 59.991 52.381 35.81 15.14 0.00 3.25
3806 3967 2.057922 CAGAATAGGGCCCTGTGGTAT 58.942 52.381 35.81 17.04 0.00 2.73
3807 3968 2.057922 AGAATAGGGCCCTGTGGTATG 58.942 52.381 35.81 0.00 0.00 2.39
3808 3969 2.054799 GAATAGGGCCCTGTGGTATGA 58.945 52.381 35.81 12.49 0.00 2.15
3809 3970 2.440494 ATAGGGCCCTGTGGTATGAT 57.560 50.000 35.81 14.52 0.00 2.45
3810 3971 1.729586 TAGGGCCCTGTGGTATGATC 58.270 55.000 35.81 0.00 0.00 2.92
3811 3972 1.062488 AGGGCCCTGTGGTATGATCC 61.062 60.000 28.05 0.00 0.00 3.36
3812 3973 1.456287 GGCCCTGTGGTATGATCCC 59.544 63.158 0.00 0.00 0.00 3.85
3813 3974 1.062488 GGCCCTGTGGTATGATCCCT 61.062 60.000 0.00 0.00 0.00 4.20
3814 3975 0.109342 GCCCTGTGGTATGATCCCTG 59.891 60.000 0.00 0.00 0.00 4.45
3815 3976 1.806496 CCCTGTGGTATGATCCCTGA 58.194 55.000 0.00 0.00 0.00 3.86
3816 3977 2.126882 CCCTGTGGTATGATCCCTGAA 58.873 52.381 0.00 0.00 0.00 3.02
3817 3978 2.509548 CCCTGTGGTATGATCCCTGAAA 59.490 50.000 0.00 0.00 0.00 2.69
3818 3979 3.434167 CCCTGTGGTATGATCCCTGAAAG 60.434 52.174 0.00 0.00 0.00 2.62
3819 3980 3.209410 CTGTGGTATGATCCCTGAAAGC 58.791 50.000 0.00 0.00 0.00 3.51
3820 3981 2.846206 TGTGGTATGATCCCTGAAAGCT 59.154 45.455 0.00 0.00 0.00 3.74
3821 3982 3.209410 GTGGTATGATCCCTGAAAGCTG 58.791 50.000 0.00 0.00 0.00 4.24
3822 3983 3.114606 TGGTATGATCCCTGAAAGCTGA 58.885 45.455 0.00 0.00 0.00 4.26
3823 3984 3.523157 TGGTATGATCCCTGAAAGCTGAA 59.477 43.478 0.00 0.00 0.00 3.02
3824 3985 4.166725 TGGTATGATCCCTGAAAGCTGAAT 59.833 41.667 0.00 0.00 0.00 2.57
3825 3986 5.369404 TGGTATGATCCCTGAAAGCTGAATA 59.631 40.000 0.00 0.00 0.00 1.75
3826 3987 6.126507 TGGTATGATCCCTGAAAGCTGAATAA 60.127 38.462 0.00 0.00 0.00 1.40
3827 3988 6.772716 GGTATGATCCCTGAAAGCTGAATAAA 59.227 38.462 0.00 0.00 0.00 1.40
3828 3989 7.285401 GGTATGATCCCTGAAAGCTGAATAAAA 59.715 37.037 0.00 0.00 0.00 1.52
3829 3990 6.515272 TGATCCCTGAAAGCTGAATAAAAC 57.485 37.500 0.00 0.00 0.00 2.43
3830 3991 6.248433 TGATCCCTGAAAGCTGAATAAAACT 58.752 36.000 0.00 0.00 0.00 2.66
3831 3992 5.964958 TCCCTGAAAGCTGAATAAAACTG 57.035 39.130 0.00 0.00 0.00 3.16
3832 3993 5.385198 TCCCTGAAAGCTGAATAAAACTGT 58.615 37.500 0.00 0.00 0.00 3.55
3833 3994 5.833131 TCCCTGAAAGCTGAATAAAACTGTT 59.167 36.000 0.00 0.00 0.00 3.16
3834 3995 5.922544 CCCTGAAAGCTGAATAAAACTGTTG 59.077 40.000 0.00 0.00 0.00 3.33
3835 3996 5.403466 CCTGAAAGCTGAATAAAACTGTTGC 59.597 40.000 0.00 0.00 0.00 4.17
3836 3997 6.147864 TGAAAGCTGAATAAAACTGTTGCT 57.852 33.333 0.00 0.00 0.00 3.91
3837 3998 6.572519 TGAAAGCTGAATAAAACTGTTGCTT 58.427 32.000 6.28 6.28 40.59 3.91
3838 3999 7.711846 TGAAAGCTGAATAAAACTGTTGCTTA 58.288 30.769 10.97 0.91 38.36 3.09
3839 4000 8.359642 TGAAAGCTGAATAAAACTGTTGCTTAT 58.640 29.630 10.97 2.97 38.36 1.73
3840 4001 9.196552 GAAAGCTGAATAAAACTGTTGCTTATT 57.803 29.630 10.97 9.98 38.36 1.40
3841 4002 8.524870 AAGCTGAATAAAACTGTTGCTTATTG 57.475 30.769 12.52 4.06 37.68 1.90
3842 4003 7.885297 AGCTGAATAAAACTGTTGCTTATTGA 58.115 30.769 12.52 6.05 0.00 2.57
3843 4004 8.526147 AGCTGAATAAAACTGTTGCTTATTGAT 58.474 29.630 12.52 0.15 0.00 2.57
3844 4005 8.589629 GCTGAATAAAACTGTTGCTTATTGATG 58.410 33.333 12.52 6.16 0.00 3.07
3845 4006 9.844790 CTGAATAAAACTGTTGCTTATTGATGA 57.155 29.630 12.52 0.00 0.00 2.92
3850 4011 7.894376 AAACTGTTGCTTATTGATGATTTGG 57.106 32.000 0.00 0.00 0.00 3.28
3851 4012 6.594788 ACTGTTGCTTATTGATGATTTGGT 57.405 33.333 0.00 0.00 0.00 3.67
3852 4013 6.392354 ACTGTTGCTTATTGATGATTTGGTG 58.608 36.000 0.00 0.00 0.00 4.17
3853 4014 5.170021 TGTTGCTTATTGATGATTTGGTGC 58.830 37.500 0.00 0.00 0.00 5.01
3854 4015 4.031418 TGCTTATTGATGATTTGGTGCG 57.969 40.909 0.00 0.00 0.00 5.34
3855 4016 3.181488 TGCTTATTGATGATTTGGTGCGG 60.181 43.478 0.00 0.00 0.00 5.69
3856 4017 3.374745 CTTATTGATGATTTGGTGCGGC 58.625 45.455 0.00 0.00 0.00 6.53
3857 4018 1.184431 ATTGATGATTTGGTGCGGCA 58.816 45.000 0.00 0.00 0.00 5.69
3858 4019 1.184431 TTGATGATTTGGTGCGGCAT 58.816 45.000 5.72 0.00 0.00 4.40
3859 4020 2.049888 TGATGATTTGGTGCGGCATA 57.950 45.000 5.72 0.00 0.00 3.14
3860 4021 1.675483 TGATGATTTGGTGCGGCATAC 59.325 47.619 5.72 3.06 0.00 2.39
3861 4022 1.675483 GATGATTTGGTGCGGCATACA 59.325 47.619 5.72 6.06 0.00 2.29
3862 4023 1.539157 TGATTTGGTGCGGCATACAA 58.461 45.000 15.89 15.89 0.00 2.41
3863 4024 1.472082 TGATTTGGTGCGGCATACAAG 59.528 47.619 18.06 0.00 0.00 3.16
3864 4025 1.742831 GATTTGGTGCGGCATACAAGA 59.257 47.619 18.06 12.22 0.00 3.02
3865 4026 1.164411 TTTGGTGCGGCATACAAGAG 58.836 50.000 18.06 0.00 0.00 2.85
3866 4027 0.036164 TTGGTGCGGCATACAAGAGT 59.964 50.000 15.89 0.00 0.00 3.24
3867 4028 0.899019 TGGTGCGGCATACAAGAGTA 59.101 50.000 5.72 0.00 34.10 2.59
3868 4029 1.484653 TGGTGCGGCATACAAGAGTAT 59.515 47.619 5.72 0.00 41.57 2.12
3869 4030 2.696187 TGGTGCGGCATACAAGAGTATA 59.304 45.455 5.72 0.00 38.88 1.47
3870 4031 3.323691 TGGTGCGGCATACAAGAGTATAT 59.676 43.478 5.72 0.00 38.88 0.86
3871 4032 4.525100 TGGTGCGGCATACAAGAGTATATA 59.475 41.667 5.72 0.00 38.88 0.86
3872 4033 5.011227 TGGTGCGGCATACAAGAGTATATAA 59.989 40.000 5.72 0.00 38.88 0.98
3873 4034 5.577164 GGTGCGGCATACAAGAGTATATAAG 59.423 44.000 5.72 0.00 38.88 1.73
3874 4035 6.387465 GTGCGGCATACAAGAGTATATAAGA 58.613 40.000 5.72 0.00 38.88 2.10
3875 4036 6.528423 GTGCGGCATACAAGAGTATATAAGAG 59.472 42.308 5.72 0.00 38.88 2.85
3876 4037 6.037098 GCGGCATACAAGAGTATATAAGAGG 58.963 44.000 0.00 0.00 38.88 3.69
3877 4038 6.565234 CGGCATACAAGAGTATATAAGAGGG 58.435 44.000 0.00 0.00 38.88 4.30
3878 4039 6.153000 CGGCATACAAGAGTATATAAGAGGGT 59.847 42.308 0.00 0.00 38.88 4.34
3879 4040 7.338703 CGGCATACAAGAGTATATAAGAGGGTA 59.661 40.741 0.00 0.00 38.88 3.69
3880 4041 8.468399 GGCATACAAGAGTATATAAGAGGGTAC 58.532 40.741 0.00 0.00 38.88 3.34
3881 4042 9.021807 GCATACAAGAGTATATAAGAGGGTACA 57.978 37.037 0.00 0.00 38.88 2.90
3885 4046 8.702819 ACAAGAGTATATAAGAGGGTACAAACC 58.297 37.037 0.00 0.00 45.97 3.27
3894 4055 2.936928 GGTACAAACCGACTTGGGG 58.063 57.895 0.00 0.00 44.64 4.96
3895 4056 0.109153 GGTACAAACCGACTTGGGGT 59.891 55.000 0.00 0.00 44.64 4.95
3896 4057 1.347378 GGTACAAACCGACTTGGGGTA 59.653 52.381 0.00 0.00 44.64 3.69
3897 4058 2.613725 GGTACAAACCGACTTGGGGTAG 60.614 54.545 0.00 0.00 44.64 3.18
3898 4059 0.399075 ACAAACCGACTTGGGGTAGG 59.601 55.000 0.00 0.00 44.68 3.18
3899 4060 0.322187 CAAACCGACTTGGGGTAGGG 60.322 60.000 0.00 0.00 43.65 3.53
3900 4061 1.494716 AAACCGACTTGGGGTAGGGG 61.495 60.000 0.00 0.00 43.65 4.79
3901 4062 2.285144 CCGACTTGGGGTAGGGGT 60.285 66.667 0.00 0.00 37.11 4.95
3902 4063 1.002017 CCGACTTGGGGTAGGGGTA 59.998 63.158 0.00 0.00 37.11 3.69
3903 4064 1.332889 CCGACTTGGGGTAGGGGTAC 61.333 65.000 0.00 0.00 37.11 3.34
3904 4065 0.615544 CGACTTGGGGTAGGGGTACA 60.616 60.000 0.00 0.00 0.00 2.90
3905 4066 1.660242 GACTTGGGGTAGGGGTACAA 58.340 55.000 0.00 0.00 0.00 2.41
3906 4067 1.987368 GACTTGGGGTAGGGGTACAAA 59.013 52.381 0.00 0.00 0.00 2.83
3907 4068 2.376181 GACTTGGGGTAGGGGTACAAAA 59.624 50.000 0.00 0.00 0.00 2.44
3908 4069 2.108776 ACTTGGGGTAGGGGTACAAAAC 59.891 50.000 0.00 0.00 0.00 2.43
3909 4070 2.136974 TGGGGTAGGGGTACAAAACT 57.863 50.000 0.00 0.00 0.00 2.66
3910 4071 1.706305 TGGGGTAGGGGTACAAAACTG 59.294 52.381 0.00 0.00 0.00 3.16
3911 4072 1.987368 GGGGTAGGGGTACAAAACTGA 59.013 52.381 0.00 0.00 0.00 3.41
3912 4073 2.290514 GGGGTAGGGGTACAAAACTGAC 60.291 54.545 0.00 0.00 0.00 3.51
3913 4074 2.641321 GGGTAGGGGTACAAAACTGACT 59.359 50.000 0.00 0.00 0.00 3.41
3914 4075 3.073503 GGGTAGGGGTACAAAACTGACTT 59.926 47.826 0.00 0.00 0.00 3.01
3915 4076 4.070009 GGTAGGGGTACAAAACTGACTTG 58.930 47.826 0.00 0.00 0.00 3.16
3916 4077 3.223674 AGGGGTACAAAACTGACTTGG 57.776 47.619 0.00 0.00 0.00 3.61
3917 4078 2.781174 AGGGGTACAAAACTGACTTGGA 59.219 45.455 0.00 0.00 0.00 3.53
3918 4079 2.882761 GGGGTACAAAACTGACTTGGAC 59.117 50.000 0.00 1.73 36.96 4.02
3919 4080 3.434596 GGGGTACAAAACTGACTTGGACT 60.435 47.826 0.00 0.00 37.69 3.85
3920 4081 4.202388 GGGGTACAAAACTGACTTGGACTA 60.202 45.833 0.00 0.00 37.69 2.59
3921 4082 4.995487 GGGTACAAAACTGACTTGGACTAG 59.005 45.833 0.00 0.00 37.69 2.57
3922 4083 5.221581 GGGTACAAAACTGACTTGGACTAGA 60.222 44.000 0.00 0.00 37.69 2.43
3923 4084 6.285990 GGTACAAAACTGACTTGGACTAGAA 58.714 40.000 0.00 0.00 37.69 2.10
3924 4085 6.424207 GGTACAAAACTGACTTGGACTAGAAG 59.576 42.308 0.00 0.00 37.69 2.85
3925 4086 5.990668 ACAAAACTGACTTGGACTAGAAGT 58.009 37.500 0.00 0.00 36.33 3.01
3926 4087 6.049790 ACAAAACTGACTTGGACTAGAAGTC 58.950 40.000 13.36 13.36 46.45 3.01
3933 4094 6.058827 GACTTGGACTAGAAGTCGTATACC 57.941 45.833 6.96 0.00 45.96 2.73
3934 4095 5.503927 ACTTGGACTAGAAGTCGTATACCA 58.496 41.667 0.00 0.00 45.96 3.25
3935 4096 6.127793 ACTTGGACTAGAAGTCGTATACCAT 58.872 40.000 0.00 0.00 45.96 3.55
3936 4097 7.285566 ACTTGGACTAGAAGTCGTATACCATA 58.714 38.462 0.00 0.00 45.96 2.74
3937 4098 7.776969 ACTTGGACTAGAAGTCGTATACCATAA 59.223 37.037 0.00 0.00 45.96 1.90
3938 4099 8.701908 TTGGACTAGAAGTCGTATACCATAAT 57.298 34.615 0.00 0.00 45.96 1.28
3939 4100 8.107399 TGGACTAGAAGTCGTATACCATAATG 57.893 38.462 0.00 0.00 45.96 1.90
3940 4101 7.940688 TGGACTAGAAGTCGTATACCATAATGA 59.059 37.037 0.00 0.00 45.96 2.57
3941 4102 8.235905 GGACTAGAAGTCGTATACCATAATGAC 58.764 40.741 0.00 0.00 45.96 3.06
3942 4103 8.921353 ACTAGAAGTCGTATACCATAATGACT 57.079 34.615 0.00 0.39 42.40 3.41
3945 4106 8.921353 AGAAGTCGTATACCATAATGACTACT 57.079 34.615 8.63 0.00 40.29 2.57
3946 4107 9.001542 AGAAGTCGTATACCATAATGACTACTC 57.998 37.037 8.63 5.22 40.29 2.59
3947 4108 8.921353 AAGTCGTATACCATAATGACTACTCT 57.079 34.615 8.63 0.00 40.29 3.24
3951 4112 9.783081 TCGTATACCATAATGACTACTCTAACA 57.217 33.333 0.00 0.00 0.00 2.41
3955 4116 7.304497 ACCATAATGACTACTCTAACATCCC 57.696 40.000 0.00 0.00 0.00 3.85
3956 4117 6.270231 ACCATAATGACTACTCTAACATCCCC 59.730 42.308 0.00 0.00 0.00 4.81
3957 4118 6.295916 CCATAATGACTACTCTAACATCCCCC 60.296 46.154 0.00 0.00 0.00 5.40
3971 4132 2.203015 CCCCCGCAGTATCAACGG 60.203 66.667 0.00 0.00 46.50 4.44
3972 4133 2.895372 CCCCGCAGTATCAACGGC 60.895 66.667 0.00 0.00 45.58 5.68
3973 4134 2.125310 CCCGCAGTATCAACGGCA 60.125 61.111 0.00 0.00 45.84 5.69
3974 4135 2.173669 CCCGCAGTATCAACGGCAG 61.174 63.158 0.00 0.00 45.84 4.85
3975 4136 2.173669 CCGCAGTATCAACGGCAGG 61.174 63.158 1.86 0.63 45.84 4.85
3976 4137 2.813179 CGCAGTATCAACGGCAGGC 61.813 63.158 1.86 0.00 45.84 4.85
3977 4138 1.450312 GCAGTATCAACGGCAGGCT 60.450 57.895 0.00 0.00 45.01 4.58
3978 4139 1.432270 GCAGTATCAACGGCAGGCTC 61.432 60.000 0.00 0.00 45.01 4.70
3979 4140 1.141881 AGTATCAACGGCAGGCTCG 59.858 57.895 0.00 0.00 0.00 5.03
3980 4141 1.141019 GTATCAACGGCAGGCTCGA 59.859 57.895 2.34 0.00 0.00 4.04
3981 4142 1.141019 TATCAACGGCAGGCTCGAC 59.859 57.895 2.34 0.00 0.00 4.20
3982 4143 2.607668 TATCAACGGCAGGCTCGACG 62.608 60.000 10.05 10.05 0.00 5.12
3983 4144 4.717629 CAACGGCAGGCTCGACGA 62.718 66.667 17.05 0.00 0.00 4.20
3984 4145 4.719369 AACGGCAGGCTCGACGAC 62.719 66.667 17.05 0.00 0.00 4.34
3987 4148 4.719369 GGCAGGCTCGACGACGTT 62.719 66.667 0.13 0.00 40.69 3.99
3988 4149 3.470567 GCAGGCTCGACGACGTTG 61.471 66.667 9.05 9.05 40.69 4.10
3989 4150 2.254350 CAGGCTCGACGACGTTGA 59.746 61.111 16.84 16.84 40.69 3.18
3990 4151 1.797933 CAGGCTCGACGACGTTGAG 60.798 63.158 32.17 32.17 44.48 3.02
3991 4152 1.964891 AGGCTCGACGACGTTGAGA 60.965 57.895 37.78 20.88 44.44 3.27
3992 4153 1.796749 GGCTCGACGACGTTGAGAC 60.797 63.158 37.78 34.32 44.44 3.36
3993 4154 1.207085 GCTCGACGACGTTGAGACT 59.793 57.895 37.78 0.10 44.44 3.24
3994 4155 1.060726 GCTCGACGACGTTGAGACTG 61.061 60.000 37.78 19.88 44.44 3.51
3995 4156 0.511653 CTCGACGACGTTGAGACTGA 59.488 55.000 32.74 5.72 44.44 3.41
3996 4157 0.939419 TCGACGACGTTGAGACTGAA 59.061 50.000 13.98 0.00 40.69 3.02
3997 4158 1.331447 TCGACGACGTTGAGACTGAAA 59.669 47.619 13.98 0.00 40.69 2.69
3998 4159 1.447201 CGACGACGTTGAGACTGAAAC 59.553 52.381 10.51 0.00 34.56 2.78
3999 4160 2.456989 GACGACGTTGAGACTGAAACA 58.543 47.619 10.51 0.00 0.00 2.83
4000 4161 2.460918 ACGACGTTGAGACTGAAACAG 58.539 47.619 10.51 0.00 37.52 3.16
4001 4162 2.098607 ACGACGTTGAGACTGAAACAGA 59.901 45.455 10.51 0.00 35.18 3.41
4002 4163 3.243434 ACGACGTTGAGACTGAAACAGAT 60.243 43.478 10.51 0.00 35.18 2.90
4003 4164 4.023450 ACGACGTTGAGACTGAAACAGATA 60.023 41.667 10.51 0.00 35.18 1.98
4004 4165 5.096169 CGACGTTGAGACTGAAACAGATAT 58.904 41.667 0.00 0.00 35.18 1.63
4005 4166 5.228220 CGACGTTGAGACTGAAACAGATATC 59.772 44.000 0.00 0.00 35.18 1.63
4006 4167 6.274157 ACGTTGAGACTGAAACAGATATCT 57.726 37.500 0.00 0.00 35.18 1.98
4007 4168 6.692486 ACGTTGAGACTGAAACAGATATCTT 58.308 36.000 1.33 0.00 35.18 2.40
4008 4169 6.587990 ACGTTGAGACTGAAACAGATATCTTG 59.412 38.462 1.33 1.70 35.18 3.02
4009 4170 6.808704 CGTTGAGACTGAAACAGATATCTTGA 59.191 38.462 1.33 0.00 35.18 3.02
4010 4171 7.329471 CGTTGAGACTGAAACAGATATCTTGAA 59.671 37.037 1.33 0.00 35.18 2.69
4011 4172 8.993121 GTTGAGACTGAAACAGATATCTTGAAA 58.007 33.333 1.33 0.00 35.18 2.69
4012 4173 8.539770 TGAGACTGAAACAGATATCTTGAAAC 57.460 34.615 1.33 0.00 35.18 2.78
4013 4174 7.329471 TGAGACTGAAACAGATATCTTGAAACG 59.671 37.037 1.33 0.00 35.18 3.60
4014 4175 6.591834 AGACTGAAACAGATATCTTGAAACGG 59.408 38.462 1.33 2.32 35.18 4.44
4015 4176 5.122396 ACTGAAACAGATATCTTGAAACGGC 59.878 40.000 1.33 0.00 35.18 5.68
4016 4177 5.245531 TGAAACAGATATCTTGAAACGGCT 58.754 37.500 1.33 0.00 0.00 5.52
4017 4178 5.705441 TGAAACAGATATCTTGAAACGGCTT 59.295 36.000 1.33 0.00 0.00 4.35
4018 4179 6.876789 TGAAACAGATATCTTGAAACGGCTTA 59.123 34.615 1.33 0.00 0.00 3.09
4019 4180 6.910536 AACAGATATCTTGAAACGGCTTAG 57.089 37.500 1.33 0.00 0.00 2.18
4020 4181 5.978814 ACAGATATCTTGAAACGGCTTAGT 58.021 37.500 1.33 0.00 0.00 2.24
4021 4182 7.108841 ACAGATATCTTGAAACGGCTTAGTA 57.891 36.000 1.33 0.00 0.00 1.82
4022 4183 7.203910 ACAGATATCTTGAAACGGCTTAGTAG 58.796 38.462 1.33 0.00 0.00 2.57
4023 4184 6.642950 CAGATATCTTGAAACGGCTTAGTAGG 59.357 42.308 1.33 0.00 0.00 3.18
4024 4185 2.968675 TCTTGAAACGGCTTAGTAGGC 58.031 47.619 0.00 0.00 43.21 3.93
4025 4186 2.300723 TCTTGAAACGGCTTAGTAGGCA 59.699 45.455 6.59 0.00 46.80 4.75
4026 4187 2.380084 TGAAACGGCTTAGTAGGCAG 57.620 50.000 6.59 4.69 46.80 4.85
4027 4188 1.621814 TGAAACGGCTTAGTAGGCAGT 59.378 47.619 6.59 5.38 46.80 4.40
4028 4189 2.000447 GAAACGGCTTAGTAGGCAGTG 59.000 52.381 10.62 0.43 46.80 3.66
4029 4190 0.391263 AACGGCTTAGTAGGCAGTGC 60.391 55.000 10.62 6.55 46.80 4.40
4039 4200 3.854856 GGCAGTGCCTTGGTGAAA 58.145 55.556 27.48 0.00 46.69 2.69
4040 4201 2.123409 GGCAGTGCCTTGGTGAAAA 58.877 52.632 27.48 0.00 46.69 2.29
4041 4202 0.681175 GGCAGTGCCTTGGTGAAAAT 59.319 50.000 27.48 0.00 46.69 1.82
4042 4203 1.606224 GGCAGTGCCTTGGTGAAAATG 60.606 52.381 27.48 0.00 46.69 2.32
4043 4204 1.069049 GCAGTGCCTTGGTGAAAATGT 59.931 47.619 2.85 0.00 0.00 2.71
4044 4205 2.863704 GCAGTGCCTTGGTGAAAATGTC 60.864 50.000 2.85 0.00 0.00 3.06
4045 4206 2.361757 CAGTGCCTTGGTGAAAATGTCA 59.638 45.455 0.00 0.00 0.00 3.58
4046 4207 2.624838 AGTGCCTTGGTGAAAATGTCAG 59.375 45.455 0.00 0.00 36.74 3.51
4063 4224 3.822607 AGCAAACTGAGCCGTAGAG 57.177 52.632 0.00 0.00 0.00 2.43
4064 4225 0.247736 AGCAAACTGAGCCGTAGAGG 59.752 55.000 0.00 0.00 44.97 3.69
4065 4226 0.741221 GCAAACTGAGCCGTAGAGGG 60.741 60.000 0.00 0.00 41.48 4.30
4066 4227 0.895530 CAAACTGAGCCGTAGAGGGA 59.104 55.000 0.00 0.00 41.48 4.20
4067 4228 1.275291 CAAACTGAGCCGTAGAGGGAA 59.725 52.381 0.00 0.00 41.48 3.97
4068 4229 0.896226 AACTGAGCCGTAGAGGGAAC 59.104 55.000 0.00 0.00 41.48 3.62
4069 4230 0.251653 ACTGAGCCGTAGAGGGAACA 60.252 55.000 0.00 0.00 41.48 3.18
4070 4231 1.115467 CTGAGCCGTAGAGGGAACAT 58.885 55.000 0.00 0.00 41.48 2.71
4071 4232 0.824109 TGAGCCGTAGAGGGAACATG 59.176 55.000 0.00 0.00 41.48 3.21
4072 4233 1.112113 GAGCCGTAGAGGGAACATGA 58.888 55.000 0.00 0.00 41.48 3.07
4073 4234 1.480954 GAGCCGTAGAGGGAACATGAA 59.519 52.381 0.00 0.00 41.48 2.57
4074 4235 1.482593 AGCCGTAGAGGGAACATGAAG 59.517 52.381 0.00 0.00 41.48 3.02
4075 4236 1.941325 CCGTAGAGGGAACATGAAGC 58.059 55.000 0.00 0.00 35.97 3.86
4076 4237 1.207089 CCGTAGAGGGAACATGAAGCA 59.793 52.381 0.00 0.00 35.97 3.91
4077 4238 2.271800 CGTAGAGGGAACATGAAGCAC 58.728 52.381 0.00 0.00 0.00 4.40
4078 4239 2.633488 GTAGAGGGAACATGAAGCACC 58.367 52.381 0.00 0.00 0.00 5.01
4079 4240 0.329596 AGAGGGAACATGAAGCACCC 59.670 55.000 0.00 4.60 40.71 4.61
4080 4241 1.002134 AGGGAACATGAAGCACCCG 60.002 57.895 0.00 0.00 44.57 5.28
4081 4242 1.002624 GGGAACATGAAGCACCCGA 60.003 57.895 0.00 0.00 0.00 5.14
4082 4243 0.608035 GGGAACATGAAGCACCCGAA 60.608 55.000 0.00 0.00 0.00 4.30
4083 4244 0.521735 GGAACATGAAGCACCCGAAC 59.478 55.000 0.00 0.00 0.00 3.95
4084 4245 0.521735 GAACATGAAGCACCCGAACC 59.478 55.000 0.00 0.00 0.00 3.62
4085 4246 0.110486 AACATGAAGCACCCGAACCT 59.890 50.000 0.00 0.00 0.00 3.50
4086 4247 0.606401 ACATGAAGCACCCGAACCTG 60.606 55.000 0.00 0.00 0.00 4.00
4087 4248 0.321564 CATGAAGCACCCGAACCTGA 60.322 55.000 0.00 0.00 0.00 3.86
4088 4249 0.321653 ATGAAGCACCCGAACCTGAC 60.322 55.000 0.00 0.00 0.00 3.51
4089 4250 1.671379 GAAGCACCCGAACCTGACC 60.671 63.158 0.00 0.00 0.00 4.02
4090 4251 2.391724 GAAGCACCCGAACCTGACCA 62.392 60.000 0.00 0.00 0.00 4.02
4091 4252 1.990160 AAGCACCCGAACCTGACCAA 61.990 55.000 0.00 0.00 0.00 3.67
4092 4253 1.966451 GCACCCGAACCTGACCAAG 60.966 63.158 0.00 0.00 0.00 3.61
4093 4254 1.752198 CACCCGAACCTGACCAAGA 59.248 57.895 0.00 0.00 0.00 3.02
4094 4255 0.320771 CACCCGAACCTGACCAAGAG 60.321 60.000 0.00 0.00 0.00 2.85
4095 4256 1.376037 CCCGAACCTGACCAAGAGC 60.376 63.158 0.00 0.00 0.00 4.09
4096 4257 1.371183 CCGAACCTGACCAAGAGCA 59.629 57.895 0.00 0.00 0.00 4.26
4097 4258 0.250295 CCGAACCTGACCAAGAGCAA 60.250 55.000 0.00 0.00 0.00 3.91
4098 4259 0.868406 CGAACCTGACCAAGAGCAAC 59.132 55.000 0.00 0.00 0.00 4.17
4099 4260 1.239347 GAACCTGACCAAGAGCAACC 58.761 55.000 0.00 0.00 0.00 3.77
4100 4261 0.846693 AACCTGACCAAGAGCAACCT 59.153 50.000 0.00 0.00 0.00 3.50
4101 4262 0.846693 ACCTGACCAAGAGCAACCTT 59.153 50.000 0.00 0.00 0.00 3.50
4102 4263 1.215423 ACCTGACCAAGAGCAACCTTT 59.785 47.619 0.00 0.00 0.00 3.11
4103 4264 2.310538 CCTGACCAAGAGCAACCTTTT 58.689 47.619 0.00 0.00 0.00 2.27
4104 4265 2.294512 CCTGACCAAGAGCAACCTTTTC 59.705 50.000 0.00 0.00 0.00 2.29
4105 4266 2.951642 CTGACCAAGAGCAACCTTTTCA 59.048 45.455 0.00 0.00 0.00 2.69
4106 4267 2.687935 TGACCAAGAGCAACCTTTTCAC 59.312 45.455 0.00 0.00 0.00 3.18
4107 4268 2.687935 GACCAAGAGCAACCTTTTCACA 59.312 45.455 0.00 0.00 0.00 3.58
4108 4269 3.096092 ACCAAGAGCAACCTTTTCACAA 58.904 40.909 0.00 0.00 0.00 3.33
4109 4270 3.513515 ACCAAGAGCAACCTTTTCACAAA 59.486 39.130 0.00 0.00 0.00 2.83
4110 4271 3.865164 CCAAGAGCAACCTTTTCACAAAC 59.135 43.478 0.00 0.00 0.00 2.93
4111 4272 4.493547 CAAGAGCAACCTTTTCACAAACA 58.506 39.130 0.00 0.00 0.00 2.83
4112 4273 4.110036 AGAGCAACCTTTTCACAAACAC 57.890 40.909 0.00 0.00 0.00 3.32
4113 4274 3.509575 AGAGCAACCTTTTCACAAACACA 59.490 39.130 0.00 0.00 0.00 3.72
4114 4275 4.021544 AGAGCAACCTTTTCACAAACACAA 60.022 37.500 0.00 0.00 0.00 3.33
4115 4276 4.831107 AGCAACCTTTTCACAAACACAAT 58.169 34.783 0.00 0.00 0.00 2.71
4116 4277 4.630940 AGCAACCTTTTCACAAACACAATG 59.369 37.500 0.00 0.00 0.00 2.82
4117 4278 4.629200 GCAACCTTTTCACAAACACAATGA 59.371 37.500 0.00 0.00 0.00 2.57
4118 4279 5.121454 GCAACCTTTTCACAAACACAATGAA 59.879 36.000 0.00 0.00 0.00 2.57
4119 4280 6.183360 GCAACCTTTTCACAAACACAATGAAT 60.183 34.615 0.00 0.00 32.61 2.57
4120 4281 7.010923 GCAACCTTTTCACAAACACAATGAATA 59.989 33.333 0.00 0.00 32.61 1.75
4121 4282 9.044150 CAACCTTTTCACAAACACAATGAATAT 57.956 29.630 0.00 0.00 32.61 1.28
4122 4283 8.816640 ACCTTTTCACAAACACAATGAATATC 57.183 30.769 0.00 0.00 32.61 1.63
4123 4284 8.420222 ACCTTTTCACAAACACAATGAATATCA 58.580 29.630 0.00 0.00 32.61 2.15
4124 4285 9.258826 CCTTTTCACAAACACAATGAATATCAA 57.741 29.630 0.00 0.00 32.61 2.57
4128 4289 9.844790 TTCACAAACACAATGAATATCAATCTC 57.155 29.630 0.00 0.00 0.00 2.75
4129 4290 9.012161 TCACAAACACAATGAATATCAATCTCA 57.988 29.630 0.00 0.00 0.00 3.27
4130 4291 9.628746 CACAAACACAATGAATATCAATCTCAA 57.371 29.630 0.00 0.00 0.00 3.02
4140 4301 9.856488 ATGAATATCAATCTCAATATGCTTTGC 57.144 29.630 0.00 0.00 0.00 3.68
4141 4302 8.019094 TGAATATCAATCTCAATATGCTTTGCG 58.981 33.333 0.00 0.00 0.00 4.85
4142 4303 3.956233 TCAATCTCAATATGCTTTGCGC 58.044 40.909 0.00 0.00 39.77 6.09
4143 4304 2.675767 ATCTCAATATGCTTTGCGCG 57.324 45.000 0.00 0.00 43.27 6.86
4144 4305 1.368641 TCTCAATATGCTTTGCGCGT 58.631 45.000 8.43 0.00 43.27 6.01
4145 4306 1.327460 TCTCAATATGCTTTGCGCGTC 59.673 47.619 8.43 0.00 43.27 5.19
4146 4307 0.026156 TCAATATGCTTTGCGCGTCG 59.974 50.000 8.43 0.00 43.27 5.12
4147 4308 0.925267 CAATATGCTTTGCGCGTCGG 60.925 55.000 8.43 0.00 43.27 4.79
4148 4309 1.366111 AATATGCTTTGCGCGTCGGT 61.366 50.000 8.43 0.00 43.27 4.69
4149 4310 2.035617 ATATGCTTTGCGCGTCGGTG 62.036 55.000 8.43 0.00 43.27 4.94
4151 4312 4.307908 GCTTTGCGCGTCGGTGTT 62.308 61.111 8.43 0.00 0.00 3.32
4152 4313 2.425124 CTTTGCGCGTCGGTGTTG 60.425 61.111 8.43 0.00 0.00 3.33
4153 4314 2.876879 CTTTGCGCGTCGGTGTTGA 61.877 57.895 8.43 0.00 0.00 3.18
4154 4315 2.368131 CTTTGCGCGTCGGTGTTGAA 62.368 55.000 8.43 0.00 0.00 2.69
4155 4316 2.634702 TTTGCGCGTCGGTGTTGAAC 62.635 55.000 8.43 0.00 0.00 3.18
4156 4317 3.335534 GCGCGTCGGTGTTGAACT 61.336 61.111 8.43 0.00 0.00 3.01
4157 4318 2.544359 CGCGTCGGTGTTGAACTG 59.456 61.111 0.00 0.00 36.38 3.16
4158 4319 2.935955 GCGTCGGTGTTGAACTGG 59.064 61.111 0.00 0.00 35.67 4.00
4159 4320 1.593209 GCGTCGGTGTTGAACTGGA 60.593 57.895 0.00 0.00 35.67 3.86
4160 4321 0.949105 GCGTCGGTGTTGAACTGGAT 60.949 55.000 0.00 0.00 35.67 3.41
4161 4322 1.508632 CGTCGGTGTTGAACTGGATT 58.491 50.000 0.00 0.00 35.67 3.01
4162 4323 1.194547 CGTCGGTGTTGAACTGGATTG 59.805 52.381 0.00 0.00 35.67 2.67
4163 4324 1.069227 GTCGGTGTTGAACTGGATTGC 60.069 52.381 0.00 0.00 35.67 3.56
4164 4325 1.202758 TCGGTGTTGAACTGGATTGCT 60.203 47.619 0.00 0.00 35.67 3.91
4165 4326 1.069022 CGGTGTTGAACTGGATTGCTG 60.069 52.381 0.00 0.00 0.00 4.41
4166 4327 1.270550 GGTGTTGAACTGGATTGCTGG 59.729 52.381 0.00 0.00 0.00 4.85
4167 4328 1.956477 GTGTTGAACTGGATTGCTGGT 59.044 47.619 0.00 0.00 0.00 4.00
4168 4329 2.030805 GTGTTGAACTGGATTGCTGGTC 60.031 50.000 0.00 0.00 0.00 4.02
4169 4330 2.229792 GTTGAACTGGATTGCTGGTCA 58.770 47.619 0.00 0.00 0.00 4.02
4170 4331 2.821969 GTTGAACTGGATTGCTGGTCAT 59.178 45.455 3.74 0.00 0.00 3.06
4171 4332 2.439409 TGAACTGGATTGCTGGTCATG 58.561 47.619 0.00 0.00 0.00 3.07
4172 4333 2.224843 TGAACTGGATTGCTGGTCATGT 60.225 45.455 0.00 0.00 0.00 3.21
4173 4334 3.008923 TGAACTGGATTGCTGGTCATGTA 59.991 43.478 0.00 0.00 0.00 2.29
4174 4335 3.272574 ACTGGATTGCTGGTCATGTAG 57.727 47.619 0.00 0.00 0.00 2.74
4175 4336 2.840038 ACTGGATTGCTGGTCATGTAGA 59.160 45.455 0.00 0.00 0.00 2.59
4176 4337 3.201290 CTGGATTGCTGGTCATGTAGAC 58.799 50.000 0.00 0.00 46.83 2.59
4177 4338 2.840038 TGGATTGCTGGTCATGTAGACT 59.160 45.455 0.00 0.00 46.72 3.24
4178 4339 3.201290 GGATTGCTGGTCATGTAGACTG 58.799 50.000 0.00 0.00 46.72 3.51
4179 4340 2.099141 TTGCTGGTCATGTAGACTGC 57.901 50.000 0.00 0.00 46.72 4.40
4180 4341 1.269958 TGCTGGTCATGTAGACTGCT 58.730 50.000 12.11 0.00 46.72 4.24
4181 4342 1.066645 TGCTGGTCATGTAGACTGCTG 60.067 52.381 12.11 0.00 46.72 4.41
4182 4343 1.205655 GCTGGTCATGTAGACTGCTGA 59.794 52.381 0.00 0.00 46.72 4.26
4183 4344 2.158986 GCTGGTCATGTAGACTGCTGAT 60.159 50.000 0.00 0.00 46.72 2.90
4184 4345 3.068732 GCTGGTCATGTAGACTGCTGATA 59.931 47.826 0.00 0.00 46.72 2.15
4185 4346 4.262377 GCTGGTCATGTAGACTGCTGATAT 60.262 45.833 0.00 0.00 46.72 1.63
4186 4347 5.205759 TGGTCATGTAGACTGCTGATATG 57.794 43.478 0.00 0.00 46.72 1.78
4187 4348 4.651045 TGGTCATGTAGACTGCTGATATGT 59.349 41.667 0.00 0.00 46.72 2.29
4188 4349 5.129320 TGGTCATGTAGACTGCTGATATGTT 59.871 40.000 0.00 0.00 46.72 2.71
4189 4350 5.464722 GGTCATGTAGACTGCTGATATGTTG 59.535 44.000 0.00 0.00 46.72 3.33
4190 4351 6.045318 GTCATGTAGACTGCTGATATGTTGT 58.955 40.000 0.00 0.00 44.09 3.32
4191 4352 6.199908 GTCATGTAGACTGCTGATATGTTGTC 59.800 42.308 0.00 0.00 44.09 3.18
4192 4353 5.659440 TGTAGACTGCTGATATGTTGTCA 57.341 39.130 0.00 0.00 0.00 3.58
4193 4354 5.410924 TGTAGACTGCTGATATGTTGTCAC 58.589 41.667 0.00 0.00 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.378181 AGTTTGATTTTCTGTGTTTTGTCTGT 58.622 30.769 0.00 0.00 0.00 3.41
1 2 7.009540 GGAGTTTGATTTTCTGTGTTTTGTCTG 59.990 37.037 0.00 0.00 0.00 3.51
2 3 7.035612 GGAGTTTGATTTTCTGTGTTTTGTCT 58.964 34.615 0.00 0.00 0.00 3.41
3 4 6.020678 CGGAGTTTGATTTTCTGTGTTTTGTC 60.021 38.462 0.00 0.00 0.00 3.18
4 5 5.804979 CGGAGTTTGATTTTCTGTGTTTTGT 59.195 36.000 0.00 0.00 0.00 2.83
5 6 5.804979 ACGGAGTTTGATTTTCTGTGTTTTG 59.195 36.000 0.00 0.00 37.78 2.44
6 7 5.961272 ACGGAGTTTGATTTTCTGTGTTTT 58.039 33.333 0.00 0.00 37.78 2.43
7 8 5.576447 ACGGAGTTTGATTTTCTGTGTTT 57.424 34.783 0.00 0.00 37.78 2.83
47 48 5.758296 CCAAGCTCTAGTGTAGTGTCAAAAA 59.242 40.000 0.00 0.00 0.00 1.94
52 53 3.129638 CCTCCAAGCTCTAGTGTAGTGTC 59.870 52.174 0.00 0.00 0.00 3.67
60 61 1.011595 TCCCTCCTCCAAGCTCTAGT 58.988 55.000 0.00 0.00 0.00 2.57
68 69 3.388024 CGATCAAACTATCCCTCCTCCAA 59.612 47.826 0.00 0.00 0.00 3.53
78 79 1.003866 GGCCGCAACGATCAAACTATC 60.004 52.381 0.00 0.00 0.00 2.08
79 80 1.014352 GGCCGCAACGATCAAACTAT 58.986 50.000 0.00 0.00 0.00 2.12
107 111 2.799017 TCTGCCTCGAAACTGGTACTA 58.201 47.619 0.00 0.00 0.00 1.82
108 112 1.629043 TCTGCCTCGAAACTGGTACT 58.371 50.000 0.00 0.00 0.00 2.73
109 113 2.674796 ATCTGCCTCGAAACTGGTAC 57.325 50.000 0.00 0.00 0.00 3.34
110 114 2.565391 TGAATCTGCCTCGAAACTGGTA 59.435 45.455 0.00 0.00 0.00 3.25
126 130 4.117685 GGAAATGCTTGCAGGAATGAATC 58.882 43.478 0.00 0.00 0.00 2.52
132 136 0.597568 CGTGGAAATGCTTGCAGGAA 59.402 50.000 0.00 0.00 40.13 3.36
184 188 0.307760 CTGCCGCCCACGATAAATTC 59.692 55.000 0.00 0.00 43.93 2.17
185 189 1.101049 CCTGCCGCCCACGATAAATT 61.101 55.000 0.00 0.00 43.93 1.82
186 190 1.525995 CCTGCCGCCCACGATAAAT 60.526 57.895 0.00 0.00 43.93 1.40
187 191 2.124901 CCTGCCGCCCACGATAAA 60.125 61.111 0.00 0.00 43.93 1.40
188 192 4.849310 GCCTGCCGCCCACGATAA 62.849 66.667 0.00 0.00 43.93 1.75
217 221 1.373873 GGAACTCGGTTCGACCACC 60.374 63.158 9.65 0.00 42.78 4.61
218 222 0.942884 GTGGAACTCGGTTCGACCAC 60.943 60.000 15.82 11.03 42.53 4.16
219 223 1.364901 GTGGAACTCGGTTCGACCA 59.635 57.895 15.82 6.26 42.53 4.02
220 224 4.256813 GTGGAACTCGGTTCGACC 57.743 61.111 15.82 4.29 42.53 4.79
221 225 1.373873 GGGTGGAACTCGGTTCGAC 60.374 63.158 17.40 17.40 45.76 4.20
222 226 3.053828 GGGTGGAACTCGGTTCGA 58.946 61.111 9.65 4.59 42.78 3.71
229 233 0.322008 CAGCAGGAAGGGTGGAACTC 60.322 60.000 0.00 0.00 37.87 3.01
230 234 1.763770 CAGCAGGAAGGGTGGAACT 59.236 57.895 0.00 0.00 36.74 3.01
231 235 4.404691 CAGCAGGAAGGGTGGAAC 57.595 61.111 0.00 0.00 32.80 3.62
235 239 1.002868 CTGACCAGCAGGAAGGGTG 60.003 63.158 0.35 0.00 41.07 4.61
236 240 3.488423 CTGACCAGCAGGAAGGGT 58.512 61.111 0.35 0.00 41.07 4.34
310 314 2.213499 AGTTGGTCAAAACGAGAGCTG 58.787 47.619 0.00 0.00 35.13 4.24
459 469 0.884704 CTTGCGCAGTACCAACAGGT 60.885 55.000 11.31 0.00 39.49 4.00
530 544 8.270744 GCTAATTGATCTGGGAAGGATATATGT 58.729 37.037 0.00 0.00 0.00 2.29
533 547 6.735229 TGGCTAATTGATCTGGGAAGGATATA 59.265 38.462 0.00 0.00 0.00 0.86
538 552 3.582998 TGGCTAATTGATCTGGGAAGG 57.417 47.619 0.00 0.00 0.00 3.46
594 610 2.716017 GGCGACCTCTCAGGACAGG 61.716 68.421 0.00 0.00 37.67 4.00
595 611 1.326213 ATGGCGACCTCTCAGGACAG 61.326 60.000 0.00 0.00 37.67 3.51
596 612 1.305297 ATGGCGACCTCTCAGGACA 60.305 57.895 0.00 0.00 37.67 4.02
597 613 1.040339 AGATGGCGACCTCTCAGGAC 61.040 60.000 0.00 0.00 37.67 3.85
598 614 1.039785 CAGATGGCGACCTCTCAGGA 61.040 60.000 0.00 0.00 37.67 3.86
632 670 2.892425 GGTGGAGCCGAAGATGCG 60.892 66.667 0.00 0.00 0.00 4.73
705 743 1.066430 TCCCGAGAAAGAAATGGGACG 60.066 52.381 0.00 0.00 43.85 4.79
711 749 1.909302 TCTGCCTCCCGAGAAAGAAAT 59.091 47.619 0.00 0.00 0.00 2.17
717 759 2.650116 GCACTCTGCCTCCCGAGAA 61.650 63.158 0.00 0.00 37.42 2.87
723 765 2.267324 GGACAGCACTCTGCCTCC 59.733 66.667 0.00 0.00 46.52 4.30
911 959 3.004734 GGCCAAGAATGTTATGCGCTAAT 59.995 43.478 9.73 0.00 0.00 1.73
912 960 2.357637 GGCCAAGAATGTTATGCGCTAA 59.642 45.455 9.73 1.78 0.00 3.09
913 961 1.946768 GGCCAAGAATGTTATGCGCTA 59.053 47.619 9.73 0.00 0.00 4.26
914 962 0.740737 GGCCAAGAATGTTATGCGCT 59.259 50.000 9.73 0.00 0.00 5.92
915 963 0.740737 AGGCCAAGAATGTTATGCGC 59.259 50.000 5.01 0.00 0.00 6.09
939 987 5.045213 TGAGTAGAGACAGAGACAGAGGATT 60.045 44.000 0.00 0.00 0.00 3.01
989 1049 2.124983 TTGCCATCTGCGCTCTCC 60.125 61.111 9.73 0.00 45.60 3.71
1167 1227 5.180492 TGTTAAACAAGGGACAAGAATAGCG 59.820 40.000 0.00 0.00 0.00 4.26
1170 1230 6.016610 GCTGTGTTAAACAAGGGACAAGAATA 60.017 38.462 0.00 0.00 38.67 1.75
1171 1231 5.221244 GCTGTGTTAAACAAGGGACAAGAAT 60.221 40.000 0.00 0.00 38.67 2.40
1172 1232 4.097286 GCTGTGTTAAACAAGGGACAAGAA 59.903 41.667 0.00 0.00 38.67 2.52
1206 1269 4.327087 GCTTAATGGCGAAAAATGGACAAG 59.673 41.667 0.00 0.00 0.00 3.16
1207 1270 4.241681 GCTTAATGGCGAAAAATGGACAA 58.758 39.130 0.00 0.00 0.00 3.18
1211 1274 2.598192 CGTGCTTAATGGCGAAAAATGG 59.402 45.455 0.00 0.00 34.52 3.16
1215 1278 2.667171 GCTTCGTGCTTAATGGCGAAAA 60.667 45.455 0.00 0.00 41.73 2.29
1231 1297 2.237751 CCGCCGATGGTTAGCTTCG 61.238 63.158 11.79 11.79 0.00 3.79
1399 1465 1.466025 ATTTGTGCTGGTGGGTGCTG 61.466 55.000 0.00 0.00 0.00 4.41
1411 1477 3.253230 GGCCAGTTTGTCATATTTGTGC 58.747 45.455 0.00 0.00 0.00 4.57
1420 1487 3.545124 ATCGCCGGCCAGTTTGTCA 62.545 57.895 23.46 0.00 0.00 3.58
1429 1496 3.595758 CCAATGGAATCGCCGGCC 61.596 66.667 23.46 6.32 40.66 6.13
1435 1502 6.851609 TCATTAGTTTTGTCCAATGGAATCG 58.148 36.000 2.31 0.00 31.38 3.34
1719 1788 0.400213 TCAAGGGGTTGACGAAGCAT 59.600 50.000 0.00 0.00 0.00 3.79
1720 1789 0.534203 GTCAAGGGGTTGACGAAGCA 60.534 55.000 2.69 0.00 41.42 3.91
1721 1790 2.244946 GTCAAGGGGTTGACGAAGC 58.755 57.895 2.69 0.00 41.42 3.86
1764 1837 0.522180 CTTCTACGTGCACGAGAGGT 59.478 55.000 42.94 24.06 43.02 3.85
1953 2036 6.707440 TCAACTTGAAGACATTAAGCCAAA 57.293 33.333 0.00 0.00 0.00 3.28
1954 2037 6.707440 TTCAACTTGAAGACATTAAGCCAA 57.293 33.333 0.00 0.00 31.83 4.52
1955 2038 6.348458 CGATTCAACTTGAAGACATTAAGCCA 60.348 38.462 9.97 0.00 40.05 4.75
1956 2039 6.024049 CGATTCAACTTGAAGACATTAAGCC 58.976 40.000 9.97 0.00 40.05 4.35
1957 2040 6.521133 CACGATTCAACTTGAAGACATTAAGC 59.479 38.462 9.97 0.00 40.05 3.09
1960 2043 5.468409 TGCACGATTCAACTTGAAGACATTA 59.532 36.000 9.97 0.00 40.05 1.90
1962 2045 3.814842 TGCACGATTCAACTTGAAGACAT 59.185 39.130 9.97 0.00 40.05 3.06
1964 2047 3.878086 TGCACGATTCAACTTGAAGAC 57.122 42.857 9.97 6.04 40.05 3.01
1965 2048 4.756642 AGATTGCACGATTCAACTTGAAGA 59.243 37.500 9.97 0.00 40.05 2.87
1966 2049 5.039480 AGATTGCACGATTCAACTTGAAG 57.961 39.130 9.97 0.00 40.05 3.02
1998 2099 3.695606 GACCAGACCGGCTGCTGA 61.696 66.667 18.09 0.00 43.50 4.26
2329 2437 0.541863 ACGGGTTGGTGATGAGGATC 59.458 55.000 0.00 0.00 0.00 3.36
2647 2755 2.101380 GTCTGCGAGGAGACGAGC 59.899 66.667 8.90 0.00 33.39 5.03
3076 3184 3.325753 AGGCTGAGGTGGAGGTGC 61.326 66.667 0.00 0.00 0.00 5.01
3181 3289 4.451150 CCGACTTAGCTGGCGGCA 62.451 66.667 22.28 12.58 44.79 5.69
3201 3310 3.041940 CACTTGACCGACCGTGGC 61.042 66.667 0.00 0.00 0.00 5.01
3203 3312 2.022129 GCTCACTTGACCGACCGTG 61.022 63.158 0.00 0.00 0.00 4.94
3293 3407 0.968405 AAAACAATCGCATGCACCCT 59.032 45.000 19.57 0.00 0.00 4.34
3296 3410 2.063156 TCCAAAACAATCGCATGCAC 57.937 45.000 19.57 0.00 0.00 4.57
3312 3430 3.410631 TTCGCATGTCTAAACCTTCCA 57.589 42.857 0.00 0.00 0.00 3.53
3330 3448 2.609459 ACGCTACTACATGCTGCATTTC 59.391 45.455 13.38 0.00 0.00 2.17
3337 3455 3.498927 AACGTTACGCTACTACATGCT 57.501 42.857 4.09 0.00 0.00 3.79
3350 3478 2.543430 TGCAACCTCCGTAAAACGTTAC 59.457 45.455 0.00 0.00 40.58 2.50
3428 3557 6.477253 ACCAAACCAAACCATAAACAAAACT 58.523 32.000 0.00 0.00 0.00 2.66
3482 3614 5.727434 ACCTCGGTACAAGTTTATTACAGG 58.273 41.667 0.00 0.00 0.00 4.00
3500 3632 5.171476 AGACAACATCAATCTTGTACCTCG 58.829 41.667 0.00 0.00 30.59 4.63
3658 3816 0.676782 GTGGTGGTGGTGATGGTAGC 60.677 60.000 0.00 0.00 0.00 3.58
3778 3939 2.975489 AGGGCCCTATTCTGACTACATG 59.025 50.000 27.42 0.00 0.00 3.21
3779 3940 2.975489 CAGGGCCCTATTCTGACTACAT 59.025 50.000 28.13 0.00 0.00 2.29
3780 3941 2.292918 ACAGGGCCCTATTCTGACTACA 60.293 50.000 28.13 0.00 33.19 2.74
3781 3942 2.103263 CACAGGGCCCTATTCTGACTAC 59.897 54.545 28.13 0.00 33.19 2.73
3782 3943 2.398588 CACAGGGCCCTATTCTGACTA 58.601 52.381 28.13 0.00 33.19 2.59
3783 3944 1.207791 CACAGGGCCCTATTCTGACT 58.792 55.000 28.13 0.00 33.19 3.41
3784 3945 0.181350 CCACAGGGCCCTATTCTGAC 59.819 60.000 28.13 0.00 33.19 3.51
3785 3946 0.253160 ACCACAGGGCCCTATTCTGA 60.253 55.000 28.13 0.00 37.90 3.27
3786 3947 1.507140 TACCACAGGGCCCTATTCTG 58.493 55.000 28.13 16.05 37.90 3.02
3787 3948 2.057922 CATACCACAGGGCCCTATTCT 58.942 52.381 28.13 10.35 37.90 2.40
3788 3949 2.054799 TCATACCACAGGGCCCTATTC 58.945 52.381 28.13 0.00 37.90 1.75
3789 3950 2.206322 TCATACCACAGGGCCCTATT 57.794 50.000 28.13 12.40 37.90 1.73
3790 3951 2.269940 GATCATACCACAGGGCCCTAT 58.730 52.381 28.13 12.06 37.90 2.57
3791 3952 1.729586 GATCATACCACAGGGCCCTA 58.270 55.000 28.13 9.36 37.90 3.53
3792 3953 1.062488 GGATCATACCACAGGGCCCT 61.062 60.000 22.28 22.28 37.90 5.19
3793 3954 1.456287 GGATCATACCACAGGGCCC 59.544 63.158 16.46 16.46 37.90 5.80
3794 3955 1.062488 AGGGATCATACCACAGGGCC 61.062 60.000 0.00 0.00 37.90 5.80
3795 3956 0.109342 CAGGGATCATACCACAGGGC 59.891 60.000 0.00 0.00 37.90 5.19
3796 3957 1.806496 TCAGGGATCATACCACAGGG 58.194 55.000 0.00 0.00 41.29 4.45
3797 3958 3.813443 CTTTCAGGGATCATACCACAGG 58.187 50.000 0.00 0.00 0.00 4.00
3798 3959 3.118112 AGCTTTCAGGGATCATACCACAG 60.118 47.826 0.00 0.00 0.00 3.66
3799 3960 2.846206 AGCTTTCAGGGATCATACCACA 59.154 45.455 0.00 0.00 0.00 4.17
3800 3961 3.118261 TCAGCTTTCAGGGATCATACCAC 60.118 47.826 0.00 0.00 0.00 4.16
3801 3962 3.114606 TCAGCTTTCAGGGATCATACCA 58.885 45.455 0.00 0.00 0.00 3.25
3802 3963 3.845781 TCAGCTTTCAGGGATCATACC 57.154 47.619 0.00 0.00 0.00 2.73
3803 3964 7.807977 TTTATTCAGCTTTCAGGGATCATAC 57.192 36.000 0.00 0.00 0.00 2.39
3804 3965 8.055181 AGTTTTATTCAGCTTTCAGGGATCATA 58.945 33.333 0.00 0.00 0.00 2.15
3805 3966 6.894103 AGTTTTATTCAGCTTTCAGGGATCAT 59.106 34.615 0.00 0.00 0.00 2.45
3806 3967 6.151648 CAGTTTTATTCAGCTTTCAGGGATCA 59.848 38.462 0.00 0.00 0.00 2.92
3807 3968 6.151817 ACAGTTTTATTCAGCTTTCAGGGATC 59.848 38.462 0.00 0.00 0.00 3.36
3808 3969 6.012745 ACAGTTTTATTCAGCTTTCAGGGAT 58.987 36.000 0.00 0.00 0.00 3.85
3809 3970 5.385198 ACAGTTTTATTCAGCTTTCAGGGA 58.615 37.500 0.00 0.00 0.00 4.20
3810 3971 5.712152 ACAGTTTTATTCAGCTTTCAGGG 57.288 39.130 0.00 0.00 0.00 4.45
3811 3972 5.403466 GCAACAGTTTTATTCAGCTTTCAGG 59.597 40.000 0.00 0.00 0.00 3.86
3812 3973 6.211515 AGCAACAGTTTTATTCAGCTTTCAG 58.788 36.000 0.00 0.00 0.00 3.02
3813 3974 6.147864 AGCAACAGTTTTATTCAGCTTTCA 57.852 33.333 0.00 0.00 0.00 2.69
3814 3975 8.748380 ATAAGCAACAGTTTTATTCAGCTTTC 57.252 30.769 9.36 0.00 40.95 2.62
3815 3976 8.981647 CAATAAGCAACAGTTTTATTCAGCTTT 58.018 29.630 9.36 0.00 40.95 3.51
3816 3977 8.359642 TCAATAAGCAACAGTTTTATTCAGCTT 58.640 29.630 9.12 9.12 42.87 3.74
3817 3978 7.885297 TCAATAAGCAACAGTTTTATTCAGCT 58.115 30.769 1.43 0.00 0.00 4.24
3818 3979 8.589629 CATCAATAAGCAACAGTTTTATTCAGC 58.410 33.333 1.43 0.00 0.00 4.26
3819 3980 9.844790 TCATCAATAAGCAACAGTTTTATTCAG 57.155 29.630 1.43 0.00 0.00 3.02
3824 3985 9.421806 CCAAATCATCAATAAGCAACAGTTTTA 57.578 29.630 0.00 0.00 0.00 1.52
3825 3986 7.933033 ACCAAATCATCAATAAGCAACAGTTTT 59.067 29.630 0.00 0.00 0.00 2.43
3826 3987 7.385752 CACCAAATCATCAATAAGCAACAGTTT 59.614 33.333 0.00 0.00 0.00 2.66
3827 3988 6.869913 CACCAAATCATCAATAAGCAACAGTT 59.130 34.615 0.00 0.00 0.00 3.16
3828 3989 6.392354 CACCAAATCATCAATAAGCAACAGT 58.608 36.000 0.00 0.00 0.00 3.55
3829 3990 5.290158 GCACCAAATCATCAATAAGCAACAG 59.710 40.000 0.00 0.00 0.00 3.16
3830 3991 5.170021 GCACCAAATCATCAATAAGCAACA 58.830 37.500 0.00 0.00 0.00 3.33
3831 3992 4.266029 CGCACCAAATCATCAATAAGCAAC 59.734 41.667 0.00 0.00 0.00 4.17
3832 3993 4.422840 CGCACCAAATCATCAATAAGCAA 58.577 39.130 0.00 0.00 0.00 3.91
3833 3994 3.181488 CCGCACCAAATCATCAATAAGCA 60.181 43.478 0.00 0.00 0.00 3.91
3834 3995 3.374745 CCGCACCAAATCATCAATAAGC 58.625 45.455 0.00 0.00 0.00 3.09
3835 3996 3.181488 TGCCGCACCAAATCATCAATAAG 60.181 43.478 0.00 0.00 0.00 1.73
3836 3997 2.757314 TGCCGCACCAAATCATCAATAA 59.243 40.909 0.00 0.00 0.00 1.40
3837 3998 2.373224 TGCCGCACCAAATCATCAATA 58.627 42.857 0.00 0.00 0.00 1.90
3838 3999 1.184431 TGCCGCACCAAATCATCAAT 58.816 45.000 0.00 0.00 0.00 2.57
3839 4000 1.184431 ATGCCGCACCAAATCATCAA 58.816 45.000 0.00 0.00 0.00 2.57
3840 4001 1.675483 GTATGCCGCACCAAATCATCA 59.325 47.619 0.00 0.00 0.00 3.07
3841 4002 1.675483 TGTATGCCGCACCAAATCATC 59.325 47.619 0.00 0.00 0.00 2.92
3842 4003 1.761449 TGTATGCCGCACCAAATCAT 58.239 45.000 0.00 0.00 0.00 2.45
3843 4004 1.472082 CTTGTATGCCGCACCAAATCA 59.528 47.619 0.00 0.00 0.00 2.57
3844 4005 1.742831 TCTTGTATGCCGCACCAAATC 59.257 47.619 0.00 0.00 0.00 2.17
3845 4006 1.745087 CTCTTGTATGCCGCACCAAAT 59.255 47.619 0.00 0.00 0.00 2.32
3846 4007 1.164411 CTCTTGTATGCCGCACCAAA 58.836 50.000 0.00 0.00 0.00 3.28
3847 4008 0.036164 ACTCTTGTATGCCGCACCAA 59.964 50.000 0.00 0.94 0.00 3.67
3848 4009 0.899019 TACTCTTGTATGCCGCACCA 59.101 50.000 0.00 0.00 0.00 4.17
3849 4010 2.240493 ATACTCTTGTATGCCGCACC 57.760 50.000 0.00 0.00 37.92 5.01
3850 4011 6.387465 TCTTATATACTCTTGTATGCCGCAC 58.613 40.000 0.00 0.00 39.49 5.34
3851 4012 6.350194 CCTCTTATATACTCTTGTATGCCGCA 60.350 42.308 0.00 0.00 39.49 5.69
3852 4013 6.037098 CCTCTTATATACTCTTGTATGCCGC 58.963 44.000 0.00 0.00 39.49 6.53
3853 4014 6.153000 ACCCTCTTATATACTCTTGTATGCCG 59.847 42.308 0.00 0.00 39.49 5.69
3854 4015 7.483580 ACCCTCTTATATACTCTTGTATGCC 57.516 40.000 0.00 0.00 39.49 4.40
3855 4016 9.021807 TGTACCCTCTTATATACTCTTGTATGC 57.978 37.037 0.00 0.00 39.49 3.14
3859 4020 8.702819 GGTTTGTACCCTCTTATATACTCTTGT 58.297 37.037 0.00 0.00 38.60 3.16
3860 4021 7.866393 CGGTTTGTACCCTCTTATATACTCTTG 59.134 40.741 0.00 0.00 41.75 3.02
3861 4022 7.781693 TCGGTTTGTACCCTCTTATATACTCTT 59.218 37.037 0.00 0.00 41.75 2.85
3862 4023 7.230309 GTCGGTTTGTACCCTCTTATATACTCT 59.770 40.741 0.00 0.00 41.75 3.24
3863 4024 7.230309 AGTCGGTTTGTACCCTCTTATATACTC 59.770 40.741 0.00 0.00 41.75 2.59
3864 4025 7.065504 AGTCGGTTTGTACCCTCTTATATACT 58.934 38.462 0.00 0.00 41.75 2.12
3865 4026 7.282332 AGTCGGTTTGTACCCTCTTATATAC 57.718 40.000 0.00 0.00 41.75 1.47
3866 4027 7.201938 CCAAGTCGGTTTGTACCCTCTTATATA 60.202 40.741 0.00 0.00 41.75 0.86
3867 4028 6.407752 CCAAGTCGGTTTGTACCCTCTTATAT 60.408 42.308 0.00 0.00 41.75 0.86
3868 4029 5.105228 CCAAGTCGGTTTGTACCCTCTTATA 60.105 44.000 0.00 0.00 41.75 0.98
3869 4030 4.323257 CCAAGTCGGTTTGTACCCTCTTAT 60.323 45.833 0.00 0.00 41.75 1.73
3870 4031 3.007182 CCAAGTCGGTTTGTACCCTCTTA 59.993 47.826 0.00 0.00 41.75 2.10
3871 4032 2.224450 CCAAGTCGGTTTGTACCCTCTT 60.224 50.000 0.00 0.00 41.75 2.85
3872 4033 1.346722 CCAAGTCGGTTTGTACCCTCT 59.653 52.381 0.00 0.00 41.75 3.69
3873 4034 1.609841 CCCAAGTCGGTTTGTACCCTC 60.610 57.143 0.00 0.00 41.75 4.30
3874 4035 0.399075 CCCAAGTCGGTTTGTACCCT 59.601 55.000 0.00 0.00 41.75 4.34
3875 4036 0.607217 CCCCAAGTCGGTTTGTACCC 60.607 60.000 0.00 0.00 41.75 3.69
3876 4037 0.109153 ACCCCAAGTCGGTTTGTACC 59.891 55.000 0.00 0.00 41.33 3.34
3877 4038 2.613725 CCTACCCCAAGTCGGTTTGTAC 60.614 54.545 0.00 0.00 34.66 2.90
3878 4039 1.624813 CCTACCCCAAGTCGGTTTGTA 59.375 52.381 0.00 0.00 34.66 2.41
3879 4040 0.399075 CCTACCCCAAGTCGGTTTGT 59.601 55.000 0.00 0.00 34.66 2.83
3880 4041 0.322187 CCCTACCCCAAGTCGGTTTG 60.322 60.000 0.00 0.00 34.66 2.93
3881 4042 1.494716 CCCCTACCCCAAGTCGGTTT 61.495 60.000 0.00 0.00 34.66 3.27
3882 4043 1.921857 CCCCTACCCCAAGTCGGTT 60.922 63.158 0.00 0.00 34.66 4.44
3883 4044 1.814292 TACCCCTACCCCAAGTCGGT 61.814 60.000 0.00 0.00 37.40 4.69
3884 4045 1.002017 TACCCCTACCCCAAGTCGG 59.998 63.158 0.00 0.00 0.00 4.79
3885 4046 0.615544 TGTACCCCTACCCCAAGTCG 60.616 60.000 0.00 0.00 0.00 4.18
3886 4047 1.660242 TTGTACCCCTACCCCAAGTC 58.340 55.000 0.00 0.00 0.00 3.01
3887 4048 2.108776 GTTTTGTACCCCTACCCCAAGT 59.891 50.000 0.00 0.00 0.00 3.16
3888 4049 2.377531 AGTTTTGTACCCCTACCCCAAG 59.622 50.000 0.00 0.00 0.00 3.61
3889 4050 2.108601 CAGTTTTGTACCCCTACCCCAA 59.891 50.000 0.00 0.00 0.00 4.12
3890 4051 1.706305 CAGTTTTGTACCCCTACCCCA 59.294 52.381 0.00 0.00 0.00 4.96
3891 4052 1.987368 TCAGTTTTGTACCCCTACCCC 59.013 52.381 0.00 0.00 0.00 4.95
3892 4053 2.641321 AGTCAGTTTTGTACCCCTACCC 59.359 50.000 0.00 0.00 0.00 3.69
3893 4054 4.070009 CAAGTCAGTTTTGTACCCCTACC 58.930 47.826 0.00 0.00 0.00 3.18
3894 4055 4.070009 CCAAGTCAGTTTTGTACCCCTAC 58.930 47.826 0.00 0.00 0.00 3.18
3895 4056 3.975312 TCCAAGTCAGTTTTGTACCCCTA 59.025 43.478 0.00 0.00 0.00 3.53
3896 4057 2.781174 TCCAAGTCAGTTTTGTACCCCT 59.219 45.455 0.00 0.00 0.00 4.79
3897 4058 2.882761 GTCCAAGTCAGTTTTGTACCCC 59.117 50.000 0.00 0.00 0.00 4.95
3898 4059 3.816994 AGTCCAAGTCAGTTTTGTACCC 58.183 45.455 0.00 0.00 0.00 3.69
3899 4060 5.850614 TCTAGTCCAAGTCAGTTTTGTACC 58.149 41.667 0.00 0.00 0.00 3.34
3900 4061 6.985059 ACTTCTAGTCCAAGTCAGTTTTGTAC 59.015 38.462 0.00 0.00 27.00 2.90
3901 4062 7.120923 ACTTCTAGTCCAAGTCAGTTTTGTA 57.879 36.000 0.00 0.00 27.00 2.41
3902 4063 5.990668 ACTTCTAGTCCAAGTCAGTTTTGT 58.009 37.500 0.00 0.00 27.00 2.83
3903 4064 5.175856 CGACTTCTAGTCCAAGTCAGTTTTG 59.824 44.000 18.00 2.79 46.99 2.44
3904 4065 5.163437 ACGACTTCTAGTCCAAGTCAGTTTT 60.163 40.000 18.00 0.57 46.99 2.43
3905 4066 4.341520 ACGACTTCTAGTCCAAGTCAGTTT 59.658 41.667 18.00 2.39 46.99 2.66
3906 4067 3.890147 ACGACTTCTAGTCCAAGTCAGTT 59.110 43.478 18.00 4.22 46.99 3.16
3907 4068 3.488363 ACGACTTCTAGTCCAAGTCAGT 58.512 45.455 18.00 14.31 46.99 3.41
3908 4069 5.821516 ATACGACTTCTAGTCCAAGTCAG 57.178 43.478 18.00 13.87 46.99 3.51
3909 4070 5.587844 GGTATACGACTTCTAGTCCAAGTCA 59.412 44.000 18.00 5.06 46.99 3.41
3910 4071 5.587844 TGGTATACGACTTCTAGTCCAAGTC 59.412 44.000 11.14 11.14 42.12 3.01
3911 4072 5.503927 TGGTATACGACTTCTAGTCCAAGT 58.496 41.667 0.00 0.00 42.12 3.16
3912 4073 6.636562 ATGGTATACGACTTCTAGTCCAAG 57.363 41.667 0.00 0.00 42.12 3.61
3913 4074 8.573885 CATTATGGTATACGACTTCTAGTCCAA 58.426 37.037 0.00 0.00 42.12 3.53
3914 4075 7.940688 TCATTATGGTATACGACTTCTAGTCCA 59.059 37.037 0.00 0.00 42.12 4.02
3915 4076 8.235905 GTCATTATGGTATACGACTTCTAGTCC 58.764 40.741 0.00 0.00 42.12 3.85
3916 4077 9.001542 AGTCATTATGGTATACGACTTCTAGTC 57.998 37.037 3.78 0.00 41.71 2.59
3917 4078 8.921353 AGTCATTATGGTATACGACTTCTAGT 57.079 34.615 3.78 0.00 29.68 2.57
3920 4081 8.921353 AGTAGTCATTATGGTATACGACTTCT 57.079 34.615 12.23 10.29 35.47 2.85
3921 4082 9.001542 AGAGTAGTCATTATGGTATACGACTTC 57.998 37.037 12.23 8.65 35.47 3.01
3922 4083 8.921353 AGAGTAGTCATTATGGTATACGACTT 57.079 34.615 12.23 0.00 35.47 3.01
3925 4086 9.783081 TGTTAGAGTAGTCATTATGGTATACGA 57.217 33.333 0.00 0.00 0.00 3.43
3929 4090 9.036980 GGGATGTTAGAGTAGTCATTATGGTAT 57.963 37.037 0.00 0.00 0.00 2.73
3930 4091 7.453752 GGGGATGTTAGAGTAGTCATTATGGTA 59.546 40.741 0.00 0.00 0.00 3.25
3931 4092 6.270231 GGGGATGTTAGAGTAGTCATTATGGT 59.730 42.308 0.00 0.00 0.00 3.55
3932 4093 6.295916 GGGGGATGTTAGAGTAGTCATTATGG 60.296 46.154 0.00 0.00 0.00 2.74
3933 4094 6.702329 GGGGGATGTTAGAGTAGTCATTATG 58.298 44.000 0.00 0.00 0.00 1.90
3934 4095 6.936968 GGGGGATGTTAGAGTAGTCATTAT 57.063 41.667 0.00 0.00 0.00 1.28
3954 4115 2.203015 CCGTTGATACTGCGGGGG 60.203 66.667 0.00 0.00 41.60 5.40
3955 4116 2.895372 GCCGTTGATACTGCGGGG 60.895 66.667 0.00 0.00 45.02 5.73
3956 4117 2.125310 TGCCGTTGATACTGCGGG 60.125 61.111 0.00 0.00 45.02 6.13
3958 4119 2.813179 GCCTGCCGTTGATACTGCG 61.813 63.158 0.00 0.00 37.31 5.18
3959 4120 1.432270 GAGCCTGCCGTTGATACTGC 61.432 60.000 0.00 0.00 35.33 4.40
3960 4121 1.148157 CGAGCCTGCCGTTGATACTG 61.148 60.000 0.00 0.00 0.00 2.74
3961 4122 1.141881 CGAGCCTGCCGTTGATACT 59.858 57.895 0.00 0.00 0.00 2.12
3962 4123 1.141019 TCGAGCCTGCCGTTGATAC 59.859 57.895 0.00 0.00 0.00 2.24
3963 4124 1.141019 GTCGAGCCTGCCGTTGATA 59.859 57.895 0.00 0.00 0.00 2.15
3964 4125 2.125512 GTCGAGCCTGCCGTTGAT 60.126 61.111 0.00 0.00 0.00 2.57
3965 4126 4.717629 CGTCGAGCCTGCCGTTGA 62.718 66.667 0.00 0.00 0.00 3.18
3966 4127 4.717629 TCGTCGAGCCTGCCGTTG 62.718 66.667 0.00 0.00 0.00 4.10
3967 4128 4.719369 GTCGTCGAGCCTGCCGTT 62.719 66.667 0.00 0.00 0.00 4.44
3970 4131 4.719369 AACGTCGTCGAGCCTGCC 62.719 66.667 9.47 0.00 40.62 4.85
3971 4132 3.470567 CAACGTCGTCGAGCCTGC 61.471 66.667 9.47 0.00 40.62 4.85
3972 4133 1.797933 CTCAACGTCGTCGAGCCTG 60.798 63.158 9.47 0.00 40.62 4.85
3973 4134 1.964891 TCTCAACGTCGTCGAGCCT 60.965 57.895 8.50 0.00 40.62 4.58
3974 4135 1.796749 GTCTCAACGTCGTCGAGCC 60.797 63.158 8.50 0.00 40.62 4.70
3975 4136 1.060726 CAGTCTCAACGTCGTCGAGC 61.061 60.000 8.50 4.33 40.62 5.03
3976 4137 0.511653 TCAGTCTCAACGTCGTCGAG 59.488 55.000 7.01 7.01 40.62 4.04
3977 4138 0.939419 TTCAGTCTCAACGTCGTCGA 59.061 50.000 9.47 0.00 40.62 4.20
3978 4139 1.447201 GTTTCAGTCTCAACGTCGTCG 59.553 52.381 0.00 0.00 43.34 5.12
3979 4140 2.456989 TGTTTCAGTCTCAACGTCGTC 58.543 47.619 0.00 0.00 0.00 4.20
3980 4141 2.098607 TCTGTTTCAGTCTCAACGTCGT 59.901 45.455 0.00 0.00 32.61 4.34
3981 4142 2.727777 TCTGTTTCAGTCTCAACGTCG 58.272 47.619 0.00 0.00 32.61 5.12
3982 4143 6.326375 AGATATCTGTTTCAGTCTCAACGTC 58.674 40.000 3.89 0.00 32.61 4.34
3983 4144 6.274157 AGATATCTGTTTCAGTCTCAACGT 57.726 37.500 3.89 0.00 32.61 3.99
3984 4145 6.808704 TCAAGATATCTGTTTCAGTCTCAACG 59.191 38.462 5.86 0.00 32.61 4.10
3985 4146 8.539770 TTCAAGATATCTGTTTCAGTCTCAAC 57.460 34.615 5.86 0.00 32.61 3.18
3986 4147 8.993121 GTTTCAAGATATCTGTTTCAGTCTCAA 58.007 33.333 5.86 0.00 32.61 3.02
3987 4148 7.329471 CGTTTCAAGATATCTGTTTCAGTCTCA 59.671 37.037 5.86 0.00 32.61 3.27
3988 4149 7.201478 CCGTTTCAAGATATCTGTTTCAGTCTC 60.201 40.741 5.86 0.00 32.61 3.36
3989 4150 6.591834 CCGTTTCAAGATATCTGTTTCAGTCT 59.408 38.462 5.86 0.00 32.61 3.24
3990 4151 6.673316 GCCGTTTCAAGATATCTGTTTCAGTC 60.673 42.308 5.86 0.00 32.61 3.51
3991 4152 5.122396 GCCGTTTCAAGATATCTGTTTCAGT 59.878 40.000 5.86 0.00 32.61 3.41
3992 4153 5.352569 AGCCGTTTCAAGATATCTGTTTCAG 59.647 40.000 5.86 0.00 0.00 3.02
3993 4154 5.245531 AGCCGTTTCAAGATATCTGTTTCA 58.754 37.500 5.86 0.00 0.00 2.69
3994 4155 5.803020 AGCCGTTTCAAGATATCTGTTTC 57.197 39.130 5.86 0.00 0.00 2.78
3995 4156 6.879458 ACTAAGCCGTTTCAAGATATCTGTTT 59.121 34.615 5.86 0.00 0.00 2.83
3996 4157 6.407202 ACTAAGCCGTTTCAAGATATCTGTT 58.593 36.000 5.86 0.00 0.00 3.16
3997 4158 5.978814 ACTAAGCCGTTTCAAGATATCTGT 58.021 37.500 5.86 0.00 0.00 3.41
3998 4159 6.642950 CCTACTAAGCCGTTTCAAGATATCTG 59.357 42.308 5.86 1.04 0.00 2.90
3999 4160 6.739008 GCCTACTAAGCCGTTTCAAGATATCT 60.739 42.308 0.00 0.00 0.00 1.98
4000 4161 5.405873 GCCTACTAAGCCGTTTCAAGATATC 59.594 44.000 0.00 0.00 0.00 1.63
4001 4162 5.163343 TGCCTACTAAGCCGTTTCAAGATAT 60.163 40.000 0.00 0.00 0.00 1.63
4002 4163 4.160814 TGCCTACTAAGCCGTTTCAAGATA 59.839 41.667 0.00 0.00 0.00 1.98
4003 4164 3.055385 TGCCTACTAAGCCGTTTCAAGAT 60.055 43.478 0.00 0.00 0.00 2.40
4004 4165 2.300723 TGCCTACTAAGCCGTTTCAAGA 59.699 45.455 0.00 0.00 0.00 3.02
4005 4166 2.673368 CTGCCTACTAAGCCGTTTCAAG 59.327 50.000 0.00 0.00 0.00 3.02
4006 4167 2.038033 ACTGCCTACTAAGCCGTTTCAA 59.962 45.455 0.00 0.00 0.00 2.69
4007 4168 1.621814 ACTGCCTACTAAGCCGTTTCA 59.378 47.619 0.00 0.00 0.00 2.69
4008 4169 2.000447 CACTGCCTACTAAGCCGTTTC 59.000 52.381 0.00 0.00 0.00 2.78
4009 4170 1.944430 GCACTGCCTACTAAGCCGTTT 60.944 52.381 0.00 0.00 0.00 3.60
4010 4171 0.391263 GCACTGCCTACTAAGCCGTT 60.391 55.000 0.00 0.00 0.00 4.44
4011 4172 1.218316 GCACTGCCTACTAAGCCGT 59.782 57.895 0.00 0.00 0.00 5.68
4012 4173 1.521681 GGCACTGCCTACTAAGCCG 60.522 63.158 13.28 0.00 46.69 5.52
4013 4174 4.542075 GGCACTGCCTACTAAGCC 57.458 61.111 13.28 0.00 46.69 4.35
4023 4184 1.069049 ACATTTTCACCAAGGCACTGC 59.931 47.619 0.00 0.00 40.86 4.40
4024 4185 2.361757 TGACATTTTCACCAAGGCACTG 59.638 45.455 0.00 0.00 40.86 3.66
4026 4187 2.863704 GCTGACATTTTCACCAAGGCAC 60.864 50.000 0.00 0.00 0.00 5.01
4027 4188 1.340889 GCTGACATTTTCACCAAGGCA 59.659 47.619 0.00 0.00 0.00 4.75
4028 4189 1.340889 TGCTGACATTTTCACCAAGGC 59.659 47.619 0.00 0.00 0.00 4.35
4029 4190 3.731652 TTGCTGACATTTTCACCAAGG 57.268 42.857 0.00 0.00 28.34 3.61
4030 4191 4.505191 CAGTTTGCTGACATTTTCACCAAG 59.495 41.667 0.00 0.00 45.28 3.61
4031 4192 4.159321 TCAGTTTGCTGACATTTTCACCAA 59.841 37.500 0.00 0.00 45.94 3.67
4032 4193 3.698539 TCAGTTTGCTGACATTTTCACCA 59.301 39.130 0.00 0.00 45.94 4.17
4033 4194 4.293415 CTCAGTTTGCTGACATTTTCACC 58.707 43.478 0.00 0.00 45.94 4.02
4034 4195 3.732721 GCTCAGTTTGCTGACATTTTCAC 59.267 43.478 0.00 0.00 45.94 3.18
4035 4196 3.243501 GGCTCAGTTTGCTGACATTTTCA 60.244 43.478 0.00 0.00 45.94 2.69
4036 4197 3.311966 GGCTCAGTTTGCTGACATTTTC 58.688 45.455 0.00 0.00 45.94 2.29
4037 4198 2.287788 CGGCTCAGTTTGCTGACATTTT 60.288 45.455 0.00 0.00 45.94 1.82
4038 4199 1.267806 CGGCTCAGTTTGCTGACATTT 59.732 47.619 0.00 0.00 45.94 2.32
4039 4200 0.877071 CGGCTCAGTTTGCTGACATT 59.123 50.000 0.00 0.00 45.94 2.71
4040 4201 0.250467 ACGGCTCAGTTTGCTGACAT 60.250 50.000 1.34 0.00 45.94 3.06
4041 4202 0.391228 TACGGCTCAGTTTGCTGACA 59.609 50.000 1.34 0.00 45.94 3.58
4042 4203 1.071605 CTACGGCTCAGTTTGCTGAC 58.928 55.000 1.34 0.00 45.94 3.51
4044 4205 1.354040 CTCTACGGCTCAGTTTGCTG 58.646 55.000 0.00 0.00 43.87 4.41
4045 4206 0.247736 CCTCTACGGCTCAGTTTGCT 59.752 55.000 0.00 0.00 0.00 3.91
4046 4207 0.741221 CCCTCTACGGCTCAGTTTGC 60.741 60.000 0.00 0.00 0.00 3.68
4047 4208 0.895530 TCCCTCTACGGCTCAGTTTG 59.104 55.000 0.00 0.00 0.00 2.93
4048 4209 1.275573 GTTCCCTCTACGGCTCAGTTT 59.724 52.381 0.00 0.00 0.00 2.66
4049 4210 0.896226 GTTCCCTCTACGGCTCAGTT 59.104 55.000 0.00 0.00 0.00 3.16
4050 4211 0.251653 TGTTCCCTCTACGGCTCAGT 60.252 55.000 0.00 0.00 0.00 3.41
4051 4212 1.115467 ATGTTCCCTCTACGGCTCAG 58.885 55.000 0.00 0.00 0.00 3.35
4052 4213 0.824109 CATGTTCCCTCTACGGCTCA 59.176 55.000 0.00 0.00 0.00 4.26
4053 4214 1.112113 TCATGTTCCCTCTACGGCTC 58.888 55.000 0.00 0.00 0.00 4.70
4054 4215 1.482593 CTTCATGTTCCCTCTACGGCT 59.517 52.381 0.00 0.00 0.00 5.52
4055 4216 1.941325 CTTCATGTTCCCTCTACGGC 58.059 55.000 0.00 0.00 0.00 5.68
4056 4217 1.207089 TGCTTCATGTTCCCTCTACGG 59.793 52.381 0.00 0.00 0.00 4.02
4057 4218 2.271800 GTGCTTCATGTTCCCTCTACG 58.728 52.381 0.00 0.00 0.00 3.51
4058 4219 2.633488 GGTGCTTCATGTTCCCTCTAC 58.367 52.381 0.00 0.00 0.00 2.59
4059 4220 1.559682 GGGTGCTTCATGTTCCCTCTA 59.440 52.381 0.00 0.00 35.63 2.43
4060 4221 0.329596 GGGTGCTTCATGTTCCCTCT 59.670 55.000 0.00 0.00 35.63 3.69
4061 4222 1.026718 CGGGTGCTTCATGTTCCCTC 61.027 60.000 0.00 0.00 36.30 4.30
4062 4223 1.002134 CGGGTGCTTCATGTTCCCT 60.002 57.895 0.00 0.00 36.30 4.20
4063 4224 0.608035 TTCGGGTGCTTCATGTTCCC 60.608 55.000 0.00 0.00 35.22 3.97
4064 4225 0.521735 GTTCGGGTGCTTCATGTTCC 59.478 55.000 0.00 0.00 0.00 3.62
4065 4226 0.521735 GGTTCGGGTGCTTCATGTTC 59.478 55.000 0.00 0.00 0.00 3.18
4066 4227 0.110486 AGGTTCGGGTGCTTCATGTT 59.890 50.000 0.00 0.00 0.00 2.71
4067 4228 0.606401 CAGGTTCGGGTGCTTCATGT 60.606 55.000 0.00 0.00 0.00 3.21
4068 4229 0.321564 TCAGGTTCGGGTGCTTCATG 60.322 55.000 0.00 0.00 0.00 3.07
4069 4230 0.321653 GTCAGGTTCGGGTGCTTCAT 60.322 55.000 0.00 0.00 0.00 2.57
4070 4231 1.070786 GTCAGGTTCGGGTGCTTCA 59.929 57.895 0.00 0.00 0.00 3.02
4071 4232 1.671379 GGTCAGGTTCGGGTGCTTC 60.671 63.158 0.00 0.00 0.00 3.86
4072 4233 1.990160 TTGGTCAGGTTCGGGTGCTT 61.990 55.000 0.00 0.00 0.00 3.91
4073 4234 2.397413 CTTGGTCAGGTTCGGGTGCT 62.397 60.000 0.00 0.00 0.00 4.40
4074 4235 1.966451 CTTGGTCAGGTTCGGGTGC 60.966 63.158 0.00 0.00 0.00 5.01
4075 4236 0.320771 CTCTTGGTCAGGTTCGGGTG 60.321 60.000 0.00 0.00 0.00 4.61
4076 4237 2.058675 CTCTTGGTCAGGTTCGGGT 58.941 57.895 0.00 0.00 0.00 5.28
4077 4238 1.376037 GCTCTTGGTCAGGTTCGGG 60.376 63.158 0.00 0.00 0.00 5.14
4078 4239 0.250295 TTGCTCTTGGTCAGGTTCGG 60.250 55.000 0.00 0.00 0.00 4.30
4079 4240 0.868406 GTTGCTCTTGGTCAGGTTCG 59.132 55.000 0.00 0.00 0.00 3.95
4080 4241 1.202818 AGGTTGCTCTTGGTCAGGTTC 60.203 52.381 0.00 0.00 0.00 3.62
4081 4242 0.846693 AGGTTGCTCTTGGTCAGGTT 59.153 50.000 0.00 0.00 0.00 3.50
4082 4243 0.846693 AAGGTTGCTCTTGGTCAGGT 59.153 50.000 0.00 0.00 0.00 4.00
4083 4244 1.986882 AAAGGTTGCTCTTGGTCAGG 58.013 50.000 0.00 0.00 0.00 3.86
4084 4245 2.951642 TGAAAAGGTTGCTCTTGGTCAG 59.048 45.455 0.00 0.00 0.00 3.51
4085 4246 2.687935 GTGAAAAGGTTGCTCTTGGTCA 59.312 45.455 0.00 0.00 0.00 4.02
4086 4247 2.687935 TGTGAAAAGGTTGCTCTTGGTC 59.312 45.455 0.00 0.00 0.00 4.02
4087 4248 2.733956 TGTGAAAAGGTTGCTCTTGGT 58.266 42.857 0.00 0.00 0.00 3.67
4088 4249 3.799281 TTGTGAAAAGGTTGCTCTTGG 57.201 42.857 0.00 0.00 0.00 3.61
4089 4250 4.327087 GTGTTTGTGAAAAGGTTGCTCTTG 59.673 41.667 0.00 0.00 0.00 3.02
4090 4251 4.021544 TGTGTTTGTGAAAAGGTTGCTCTT 60.022 37.500 0.00 0.00 0.00 2.85
4091 4252 3.509575 TGTGTTTGTGAAAAGGTTGCTCT 59.490 39.130 0.00 0.00 0.00 4.09
4092 4253 3.843999 TGTGTTTGTGAAAAGGTTGCTC 58.156 40.909 0.00 0.00 0.00 4.26
4093 4254 3.951775 TGTGTTTGTGAAAAGGTTGCT 57.048 38.095 0.00 0.00 0.00 3.91
4094 4255 4.629200 TCATTGTGTTTGTGAAAAGGTTGC 59.371 37.500 0.00 0.00 0.00 4.17
4095 4256 6.718454 TTCATTGTGTTTGTGAAAAGGTTG 57.282 33.333 0.00 0.00 0.00 3.77
4096 4257 9.260002 GATATTCATTGTGTTTGTGAAAAGGTT 57.740 29.630 0.00 0.00 35.70 3.50
4097 4258 8.420222 TGATATTCATTGTGTTTGTGAAAAGGT 58.580 29.630 0.00 0.00 35.70 3.50
4098 4259 8.815141 TGATATTCATTGTGTTTGTGAAAAGG 57.185 30.769 0.00 0.00 35.70 3.11
4102 4263 9.844790 GAGATTGATATTCATTGTGTTTGTGAA 57.155 29.630 0.00 0.00 36.42 3.18
4103 4264 9.012161 TGAGATTGATATTCATTGTGTTTGTGA 57.988 29.630 0.00 0.00 0.00 3.58
4104 4265 9.628746 TTGAGATTGATATTCATTGTGTTTGTG 57.371 29.630 0.00 0.00 0.00 3.33
4114 4275 9.856488 GCAAAGCATATTGAGATTGATATTCAT 57.144 29.630 1.61 0.00 31.84 2.57
4115 4276 8.019094 CGCAAAGCATATTGAGATTGATATTCA 58.981 33.333 1.61 0.00 32.61 2.57
4116 4277 8.378228 CGCAAAGCATATTGAGATTGATATTC 57.622 34.615 1.61 0.00 32.61 1.75
4134 4295 4.307908 AACACCGACGCGCAAAGC 62.308 61.111 5.73 0.00 43.95 3.51
4135 4296 2.368131 TTCAACACCGACGCGCAAAG 62.368 55.000 5.73 0.00 0.00 2.77
4136 4297 2.461945 TTCAACACCGACGCGCAAA 61.462 52.632 5.73 0.00 0.00 3.68
4137 4298 2.890961 TTCAACACCGACGCGCAA 60.891 55.556 5.73 0.00 0.00 4.85
4138 4299 3.632107 GTTCAACACCGACGCGCA 61.632 61.111 5.73 0.00 0.00 6.09
4139 4300 3.335534 AGTTCAACACCGACGCGC 61.336 61.111 5.73 0.00 0.00 6.86
4140 4301 2.544359 CAGTTCAACACCGACGCG 59.456 61.111 3.53 3.53 0.00 6.01
4141 4302 0.949105 ATCCAGTTCAACACCGACGC 60.949 55.000 0.00 0.00 0.00 5.19
4142 4303 1.194547 CAATCCAGTTCAACACCGACG 59.805 52.381 0.00 0.00 0.00 5.12
4143 4304 1.069227 GCAATCCAGTTCAACACCGAC 60.069 52.381 0.00 0.00 0.00 4.79
4144 4305 1.202758 AGCAATCCAGTTCAACACCGA 60.203 47.619 0.00 0.00 0.00 4.69
4145 4306 1.069022 CAGCAATCCAGTTCAACACCG 60.069 52.381 0.00 0.00 0.00 4.94
4146 4307 1.270550 CCAGCAATCCAGTTCAACACC 59.729 52.381 0.00 0.00 0.00 4.16
4147 4308 1.956477 ACCAGCAATCCAGTTCAACAC 59.044 47.619 0.00 0.00 0.00 3.32
4148 4309 2.229792 GACCAGCAATCCAGTTCAACA 58.770 47.619 0.00 0.00 0.00 3.33
4149 4310 2.229792 TGACCAGCAATCCAGTTCAAC 58.770 47.619 0.00 0.00 0.00 3.18
4150 4311 2.655090 TGACCAGCAATCCAGTTCAA 57.345 45.000 0.00 0.00 0.00 2.69
4151 4312 2.224843 ACATGACCAGCAATCCAGTTCA 60.225 45.455 0.00 0.00 0.00 3.18
4152 4313 2.440409 ACATGACCAGCAATCCAGTTC 58.560 47.619 0.00 0.00 0.00 3.01
4153 4314 2.592102 ACATGACCAGCAATCCAGTT 57.408 45.000 0.00 0.00 0.00 3.16
4154 4315 2.840038 TCTACATGACCAGCAATCCAGT 59.160 45.455 0.00 0.00 0.00 4.00
4155 4316 3.118482 AGTCTACATGACCAGCAATCCAG 60.118 47.826 0.00 0.00 46.46 3.86
4156 4317 2.840038 AGTCTACATGACCAGCAATCCA 59.160 45.455 0.00 0.00 46.46 3.41
4157 4318 3.201290 CAGTCTACATGACCAGCAATCC 58.799 50.000 0.00 0.00 46.46 3.01
4158 4319 2.611292 GCAGTCTACATGACCAGCAATC 59.389 50.000 0.00 0.00 46.46 2.67
4159 4320 2.238144 AGCAGTCTACATGACCAGCAAT 59.762 45.455 0.00 0.00 46.46 3.56
4160 4321 1.625315 AGCAGTCTACATGACCAGCAA 59.375 47.619 0.00 0.00 46.46 3.91
4161 4322 1.066645 CAGCAGTCTACATGACCAGCA 60.067 52.381 0.00 0.00 46.46 4.41
4162 4323 1.205655 TCAGCAGTCTACATGACCAGC 59.794 52.381 0.00 0.00 46.46 4.85
4163 4324 3.815856 ATCAGCAGTCTACATGACCAG 57.184 47.619 0.00 0.00 46.46 4.00
4164 4325 4.651045 ACATATCAGCAGTCTACATGACCA 59.349 41.667 0.00 0.00 46.46 4.02
4165 4326 5.207110 ACATATCAGCAGTCTACATGACC 57.793 43.478 0.00 0.00 46.46 4.02
4166 4327 6.045318 ACAACATATCAGCAGTCTACATGAC 58.955 40.000 0.00 0.00 45.67 3.06
4167 4328 6.127366 TGACAACATATCAGCAGTCTACATGA 60.127 38.462 0.00 0.00 0.00 3.07
4168 4329 6.019237 GTGACAACATATCAGCAGTCTACATG 60.019 42.308 0.00 0.00 0.00 3.21
4169 4330 6.045318 GTGACAACATATCAGCAGTCTACAT 58.955 40.000 0.00 0.00 0.00 2.29
4170 4331 5.410924 GTGACAACATATCAGCAGTCTACA 58.589 41.667 0.00 0.00 0.00 2.74
4171 4332 5.957910 GTGACAACATATCAGCAGTCTAC 57.042 43.478 0.00 0.00 0.00 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.