Multiple sequence alignment - TraesCS2D01G392000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G392000 chr2D 100.000 3699 0 0 1 3699 499309900 499313598 0.000000e+00 6831.0
1 TraesCS2D01G392000 chr2D 89.916 476 21 10 267 716 499322421 499322895 4.120000e-164 588.0
2 TraesCS2D01G392000 chr2D 96.460 113 4 0 1 113 499307718 499307606 1.750000e-43 187.0
3 TraesCS2D01G392000 chr2D 93.162 117 7 1 1 117 118404824 118404939 1.770000e-38 171.0
4 TraesCS2D01G392000 chr6D 98.264 2995 37 4 719 3699 57832587 57835580 0.000000e+00 5228.0
5 TraesCS2D01G392000 chr6D 97.630 2996 55 5 717 3699 448503571 448500579 0.000000e+00 5125.0
6 TraesCS2D01G392000 chr6D 97.455 2279 38 6 1434 3699 464130027 464132298 0.000000e+00 3869.0
7 TraesCS2D01G392000 chr6D 83.438 320 20 13 268 556 20919676 20919993 2.190000e-67 267.0
8 TraesCS2D01G392000 chr1D 97.963 2994 45 4 719 3699 479819307 479816317 0.000000e+00 5177.0
9 TraesCS2D01G392000 chr1D 97.697 2996 52 5 718 3699 442318421 442321413 0.000000e+00 5134.0
10 TraesCS2D01G392000 chr1D 96.660 2994 60 8 719 3699 241476926 241473960 0.000000e+00 4939.0
11 TraesCS2D01G392000 chr1D 84.273 337 33 8 339 658 493116092 493116425 9.980000e-81 311.0
12 TraesCS2D01G392000 chr1D 80.624 449 38 18 256 658 493109914 493110359 6.000000e-78 302.0
13 TraesCS2D01G392000 chr1D 83.529 340 37 8 339 661 342152837 342152500 2.160000e-77 300.0
14 TraesCS2D01G392000 chr1D 87.692 65 5 3 202 264 66449640 66449577 5.120000e-09 73.1
15 TraesCS2D01G392000 chr1D 88.525 61 5 2 205 264 141252417 141252358 5.120000e-09 73.1
16 TraesCS2D01G392000 chr1D 85.507 69 7 3 199 265 130934552 130934485 6.630000e-08 69.4
17 TraesCS2D01G392000 chr1D 89.091 55 4 2 42 95 26155002 26155055 2.380000e-07 67.6
18 TraesCS2D01G392000 chr3D 97.027 2994 54 6 719 3699 550468214 550465243 0.000000e+00 5003.0
19 TraesCS2D01G392000 chr3D 82.679 433 31 17 268 658 538874432 538874862 9.840000e-91 344.0
20 TraesCS2D01G392000 chr3D 85.163 337 31 7 339 658 538879162 538879496 9.910000e-86 327.0
21 TraesCS2D01G392000 chr3D 84.412 340 34 7 339 661 500703939 500703602 2.140000e-82 316.0
22 TraesCS2D01G392000 chr3D 91.071 112 10 0 3 114 385419950 385420061 6.400000e-33 152.0
23 TraesCS2D01G392000 chr5D 96.187 3016 75 18 719 3699 430991431 430988421 0.000000e+00 4896.0
24 TraesCS2D01G392000 chr5D 89.908 109 9 2 1 108 152781684 152781791 4.980000e-29 139.0
25 TraesCS2D01G392000 chr5D 78.788 99 13 4 120 210 383312822 383312920 3.990000e-05 60.2
26 TraesCS2D01G392000 chrUn 96.915 2399 34 5 716 3102 29129081 29131451 0.000000e+00 3984.0
27 TraesCS2D01G392000 chrUn 96.355 2332 42 16 717 3014 26236291 26233969 0.000000e+00 3795.0
28 TraesCS2D01G392000 chr7D 98.256 2007 28 1 719 2725 530362460 530364459 0.000000e+00 3506.0
29 TraesCS2D01G392000 chr7D 82.012 328 26 10 267 563 546611913 546611588 7.930000e-62 248.0
30 TraesCS2D01G392000 chr7D 87.195 164 8 6 267 418 173717869 173718031 1.370000e-39 174.0
31 TraesCS2D01G392000 chr4D 97.131 976 24 2 2725 3699 374747482 374746510 0.000000e+00 1644.0
32 TraesCS2D01G392000 chr4D 96.824 976 28 2 2725 3699 374043210 374044183 0.000000e+00 1628.0
33 TraesCS2D01G392000 chr2B 88.325 394 29 4 339 716 752432875 752432483 1.210000e-124 457.0
34 TraesCS2D01G392000 chr2B 85.930 398 37 8 339 719 752459328 752458933 1.240000e-109 407.0
35 TraesCS2D01G392000 chr2B 88.672 256 14 2 450 691 337907492 337907238 7.770000e-77 298.0
36 TraesCS2D01G392000 chr2B 79.123 479 49 24 269 710 337920962 337920498 2.170000e-72 283.0
37 TraesCS2D01G392000 chr2B 89.394 66 5 2 200 265 135623146 135623083 8.510000e-12 82.4
38 TraesCS2D01G392000 chr4A 84.091 396 47 6 339 719 230322211 230321817 5.840000e-98 368.0
39 TraesCS2D01G392000 chr4A 95.495 111 4 1 1 111 153776402 153776293 3.800000e-40 176.0
40 TraesCS2D01G392000 chr7B 79.872 467 56 18 269 711 343701089 343701541 1.290000e-79 307.0
41 TraesCS2D01G392000 chr7B 81.612 397 48 12 339 716 546207178 546207568 4.640000e-79 305.0
42 TraesCS2D01G392000 chr7B 82.421 347 42 9 339 668 286988731 286989075 6.050000e-73 285.0
43 TraesCS2D01G392000 chr7B 91.150 113 9 1 1 113 174564391 174564502 6.400000e-33 152.0
44 TraesCS2D01G392000 chr7B 90.654 107 10 0 6 112 86973916 86974022 3.850000e-30 143.0
45 TraesCS2D01G392000 chr4B 80.455 440 54 16 270 691 448180426 448180001 1.290000e-79 307.0
46 TraesCS2D01G392000 chr4B 86.364 154 17 4 564 716 113714963 113715113 8.220000e-37 165.0
47 TraesCS2D01G392000 chr5B 84.132 334 28 11 339 655 659230121 659230446 2.160000e-77 300.0
48 TraesCS2D01G392000 chr5B 81.356 118 18 4 113 229 673293233 673293347 3.930000e-15 93.5
49 TraesCS2D01G392000 chr5B 80.508 118 17 6 2 117 625119253 625119140 6.580000e-13 86.1
50 TraesCS2D01G392000 chr5B 80.508 118 17 6 2 117 628698802 628698689 6.580000e-13 86.1
51 TraesCS2D01G392000 chr5B 80.531 113 19 2 6 117 503108455 503108345 2.370000e-12 84.2
52 TraesCS2D01G392000 chr5B 79.817 109 19 3 6 113 335545273 335545379 3.960000e-10 76.8
53 TraesCS2D01G392000 chr5B 79.646 113 18 5 2 112 625120818 625120927 3.960000e-10 76.8
54 TraesCS2D01G392000 chr5B 79.464 112 18 5 6 115 535467481 535467373 1.420000e-09 75.0
55 TraesCS2D01G392000 chr1B 84.740 308 30 9 270 563 248364195 248363891 3.610000e-75 292.0
56 TraesCS2D01G392000 chr6B 80.122 327 33 12 268 563 93886912 93887237 8.050000e-52 215.0
57 TraesCS2D01G392000 chr6B 96.512 86 3 0 267 352 700206802 700206717 3.850000e-30 143.0
58 TraesCS2D01G392000 chr6B 86.364 66 7 2 203 267 68304693 68304629 1.840000e-08 71.3
59 TraesCS2D01G392000 chr3A 90.000 110 11 0 6 115 505738057 505737948 3.850000e-30 143.0
60 TraesCS2D01G392000 chr3A 88.710 62 5 2 205 265 264057262 264057322 1.420000e-09 75.0
61 TraesCS2D01G392000 chr1A 90.090 111 10 1 3 113 587816738 587816847 3.850000e-30 143.0
62 TraesCS2D01G392000 chr5A 89.720 107 11 0 6 112 544524252 544524146 1.790000e-28 137.0
63 TraesCS2D01G392000 chr5A 88.525 61 6 1 206 265 646573118 646573178 5.120000e-09 73.1
64 TraesCS2D01G392000 chr7A 84.483 116 18 0 114 229 620942511 620942626 8.390000e-22 115.0
65 TraesCS2D01G392000 chr6A 88.710 62 5 2 205 265 386961538 386961598 1.420000e-09 75.0
66 TraesCS2D01G392000 chr6A 78.261 115 20 5 2 114 566433095 566433206 6.630000e-08 69.4
67 TraesCS2D01G392000 chr2A 88.710 62 6 1 204 265 662959847 662959787 1.420000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G392000 chr2D 499309900 499313598 3698 False 6831 6831 100.000 1 3699 1 chr2D.!!$F2 3698
1 TraesCS2D01G392000 chr6D 57832587 57835580 2993 False 5228 5228 98.264 719 3699 1 chr6D.!!$F2 2980
2 TraesCS2D01G392000 chr6D 448500579 448503571 2992 True 5125 5125 97.630 717 3699 1 chr6D.!!$R1 2982
3 TraesCS2D01G392000 chr6D 464130027 464132298 2271 False 3869 3869 97.455 1434 3699 1 chr6D.!!$F3 2265
4 TraesCS2D01G392000 chr1D 479816317 479819307 2990 True 5177 5177 97.963 719 3699 1 chr1D.!!$R6 2980
5 TraesCS2D01G392000 chr1D 442318421 442321413 2992 False 5134 5134 97.697 718 3699 1 chr1D.!!$F2 2981
6 TraesCS2D01G392000 chr1D 241473960 241476926 2966 True 4939 4939 96.660 719 3699 1 chr1D.!!$R4 2980
7 TraesCS2D01G392000 chr3D 550465243 550468214 2971 True 5003 5003 97.027 719 3699 1 chr3D.!!$R2 2980
8 TraesCS2D01G392000 chr5D 430988421 430991431 3010 True 4896 4896 96.187 719 3699 1 chr5D.!!$R1 2980
9 TraesCS2D01G392000 chrUn 29129081 29131451 2370 False 3984 3984 96.915 716 3102 1 chrUn.!!$F1 2386
10 TraesCS2D01G392000 chrUn 26233969 26236291 2322 True 3795 3795 96.355 717 3014 1 chrUn.!!$R1 2297
11 TraesCS2D01G392000 chr7D 530362460 530364459 1999 False 3506 3506 98.256 719 2725 1 chr7D.!!$F2 2006
12 TraesCS2D01G392000 chr4D 374746510 374747482 972 True 1644 1644 97.131 2725 3699 1 chr4D.!!$R1 974
13 TraesCS2D01G392000 chr4D 374043210 374044183 973 False 1628 1628 96.824 2725 3699 1 chr4D.!!$F1 974

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
470 471 0.030235 TCTGACACGACACCGACAAG 59.970 55.0 0.00 0.0 39.5 3.16 F
652 653 0.037590 TACATCCCAAGCACACACCC 59.962 55.0 0.00 0.0 0.0 4.61 F
669 670 0.550914 CCCATGCCCACCTAGCTTTA 59.449 55.0 0.00 0.0 0.0 1.85 F
1993 1998 0.969149 AGTCCAAGATGTGCACGAGA 59.031 50.0 13.13 0.0 0.0 4.04 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1777 1782 1.681780 GCCACAATTGCTACCTGCCTA 60.682 52.381 5.05 0.0 42.00 3.93 R
1941 1946 1.999648 TGGCATCCAGCTTGTTCTTT 58.000 45.000 0.00 0.0 44.79 2.52 R
2301 2306 3.245443 ACTCTAGCTTCTCTTGGGTGAGA 60.245 47.826 0.00 0.0 40.87 3.27 R
3520 3612 1.018226 CGTCAAGCTGCAGGAAGGAG 61.018 60.000 17.12 0.0 38.96 3.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 1.855513 CACATTGGGTGCAAGTTGTG 58.144 50.000 4.48 0.00 41.36 3.33
28 29 0.752054 ACATTGGGTGCAAGTTGTGG 59.248 50.000 4.48 0.00 0.00 4.17
29 30 0.033781 CATTGGGTGCAAGTTGTGGG 59.966 55.000 4.48 0.00 0.00 4.61
30 31 0.105760 ATTGGGTGCAAGTTGTGGGA 60.106 50.000 4.48 0.00 0.00 4.37
31 32 1.040339 TTGGGTGCAAGTTGTGGGAC 61.040 55.000 4.48 0.00 0.00 4.46
32 33 1.152756 GGGTGCAAGTTGTGGGACT 60.153 57.895 4.48 0.00 0.00 3.85
33 34 1.455383 GGGTGCAAGTTGTGGGACTG 61.455 60.000 4.48 0.00 0.00 3.51
34 35 1.455383 GGTGCAAGTTGTGGGACTGG 61.455 60.000 4.48 0.00 0.00 4.00
35 36 1.152777 TGCAAGTTGTGGGACTGGG 60.153 57.895 4.48 0.00 0.00 4.45
36 37 1.152756 GCAAGTTGTGGGACTGGGT 60.153 57.895 4.48 0.00 0.00 4.51
37 38 0.109723 GCAAGTTGTGGGACTGGGTA 59.890 55.000 4.48 0.00 0.00 3.69
38 39 1.882352 GCAAGTTGTGGGACTGGGTAG 60.882 57.143 4.48 0.00 0.00 3.18
39 40 1.064825 AAGTTGTGGGACTGGGTAGG 58.935 55.000 0.00 0.00 0.00 3.18
40 41 0.840722 AGTTGTGGGACTGGGTAGGG 60.841 60.000 0.00 0.00 0.00 3.53
41 42 1.131928 GTTGTGGGACTGGGTAGGGT 61.132 60.000 0.00 0.00 0.00 4.34
42 43 0.838987 TTGTGGGACTGGGTAGGGTC 60.839 60.000 0.00 0.00 0.00 4.46
43 44 1.229400 GTGGGACTGGGTAGGGTCA 60.229 63.158 0.00 0.00 34.49 4.02
44 45 0.620700 GTGGGACTGGGTAGGGTCAT 60.621 60.000 0.00 0.00 34.49 3.06
45 46 0.120377 TGGGACTGGGTAGGGTCATT 59.880 55.000 0.00 0.00 34.49 2.57
46 47 1.296002 GGGACTGGGTAGGGTCATTT 58.704 55.000 0.00 0.00 34.49 2.32
47 48 1.639108 GGGACTGGGTAGGGTCATTTT 59.361 52.381 0.00 0.00 34.49 1.82
48 49 2.848071 GGGACTGGGTAGGGTCATTTTA 59.152 50.000 0.00 0.00 34.49 1.52
49 50 3.371273 GGGACTGGGTAGGGTCATTTTAC 60.371 52.174 0.00 0.00 34.49 2.01
50 51 3.264964 GGACTGGGTAGGGTCATTTTACA 59.735 47.826 0.00 0.00 34.49 2.41
51 52 4.263594 GGACTGGGTAGGGTCATTTTACAA 60.264 45.833 0.00 0.00 34.49 2.41
52 53 4.918588 ACTGGGTAGGGTCATTTTACAAG 58.081 43.478 0.00 0.00 0.00 3.16
53 54 4.352893 ACTGGGTAGGGTCATTTTACAAGT 59.647 41.667 0.00 0.00 0.00 3.16
54 55 5.163023 ACTGGGTAGGGTCATTTTACAAGTT 60.163 40.000 0.00 0.00 0.00 2.66
55 56 5.074115 TGGGTAGGGTCATTTTACAAGTTG 58.926 41.667 0.00 0.00 0.00 3.16
56 57 5.074804 GGGTAGGGTCATTTTACAAGTTGT 58.925 41.667 14.05 14.05 0.00 3.32
57 58 6.183361 TGGGTAGGGTCATTTTACAAGTTGTA 60.183 38.462 11.75 11.75 0.00 2.41
58 59 6.373495 GGGTAGGGTCATTTTACAAGTTGTAG 59.627 42.308 15.06 4.95 33.92 2.74
59 60 6.373495 GGTAGGGTCATTTTACAAGTTGTAGG 59.627 42.308 15.06 7.54 33.92 3.18
60 61 6.195600 AGGGTCATTTTACAAGTTGTAGGA 57.804 37.500 15.06 8.90 33.92 2.94
61 62 6.002082 AGGGTCATTTTACAAGTTGTAGGAC 58.998 40.000 15.06 18.08 33.92 3.85
62 63 5.182570 GGGTCATTTTACAAGTTGTAGGACC 59.817 44.000 28.33 28.33 38.90 4.46
63 64 5.766174 GGTCATTTTACAAGTTGTAGGACCA 59.234 40.000 29.63 13.45 39.13 4.02
64 65 6.263617 GGTCATTTTACAAGTTGTAGGACCAA 59.736 38.462 29.63 17.03 39.13 3.67
65 66 7.201839 GGTCATTTTACAAGTTGTAGGACCAAA 60.202 37.037 29.63 21.86 39.13 3.28
66 67 7.646526 GTCATTTTACAAGTTGTAGGACCAAAC 59.353 37.037 15.06 6.57 33.92 2.93
67 68 6.453926 TTTTACAAGTTGTAGGACCAAACC 57.546 37.500 15.06 0.00 33.92 3.27
68 69 3.655615 ACAAGTTGTAGGACCAAACCA 57.344 42.857 6.75 0.00 0.00 3.67
69 70 4.178956 ACAAGTTGTAGGACCAAACCAT 57.821 40.909 6.75 0.00 0.00 3.55
70 71 4.142038 ACAAGTTGTAGGACCAAACCATC 58.858 43.478 6.75 0.00 0.00 3.51
71 72 4.141287 CAAGTTGTAGGACCAAACCATCA 58.859 43.478 0.00 0.00 0.00 3.07
72 73 3.751518 AGTTGTAGGACCAAACCATCAC 58.248 45.455 0.00 0.00 0.00 3.06
73 74 3.137544 AGTTGTAGGACCAAACCATCACA 59.862 43.478 0.00 0.00 0.00 3.58
74 75 4.079253 GTTGTAGGACCAAACCATCACAT 58.921 43.478 0.00 0.00 0.00 3.21
75 76 4.380843 TGTAGGACCAAACCATCACATT 57.619 40.909 0.00 0.00 0.00 2.71
76 77 4.078537 TGTAGGACCAAACCATCACATTG 58.921 43.478 0.00 0.00 0.00 2.82
77 78 3.243359 AGGACCAAACCATCACATTGT 57.757 42.857 0.00 0.00 0.00 2.71
78 79 2.892852 AGGACCAAACCATCACATTGTG 59.107 45.455 10.64 10.64 34.45 3.33
79 80 2.890311 GGACCAAACCATCACATTGTGA 59.110 45.455 21.05 21.05 46.90 3.58
80 81 3.057315 GGACCAAACCATCACATTGTGAG 60.057 47.826 22.82 13.65 46.04 3.51
81 82 2.297033 ACCAAACCATCACATTGTGAGC 59.703 45.455 22.82 0.00 46.04 4.26
82 83 2.296752 CCAAACCATCACATTGTGAGCA 59.703 45.455 22.82 2.54 46.04 4.26
83 84 3.243805 CCAAACCATCACATTGTGAGCAA 60.244 43.478 22.82 2.18 46.04 3.91
84 85 3.928727 AACCATCACATTGTGAGCAAG 57.071 42.857 22.82 13.87 46.04 4.01
85 86 2.867624 ACCATCACATTGTGAGCAAGT 58.132 42.857 22.82 14.42 46.04 3.16
86 87 3.225104 ACCATCACATTGTGAGCAAGTT 58.775 40.909 22.82 4.26 46.04 2.66
87 88 3.638160 ACCATCACATTGTGAGCAAGTTT 59.362 39.130 22.82 3.56 46.04 2.66
88 89 4.099881 ACCATCACATTGTGAGCAAGTTTT 59.900 37.500 22.82 2.86 46.04 2.43
89 90 5.301551 ACCATCACATTGTGAGCAAGTTTTA 59.698 36.000 22.82 0.00 46.04 1.52
90 91 5.860182 CCATCACATTGTGAGCAAGTTTTAG 59.140 40.000 22.82 4.76 46.04 1.85
91 92 5.437289 TCACATTGTGAGCAAGTTTTAGG 57.563 39.130 15.41 0.00 37.67 2.69
92 93 5.129634 TCACATTGTGAGCAAGTTTTAGGA 58.870 37.500 15.41 0.00 37.67 2.94
93 94 5.008613 TCACATTGTGAGCAAGTTTTAGGAC 59.991 40.000 15.41 0.00 37.67 3.85
94 95 4.278419 ACATTGTGAGCAAGTTTTAGGACC 59.722 41.667 0.00 0.00 38.10 4.46
95 96 2.858745 TGTGAGCAAGTTTTAGGACCC 58.141 47.619 0.00 0.00 0.00 4.46
96 97 2.160205 GTGAGCAAGTTTTAGGACCCC 58.840 52.381 0.00 0.00 0.00 4.95
97 98 1.074889 TGAGCAAGTTTTAGGACCCCC 59.925 52.381 0.00 0.00 0.00 5.40
98 99 0.037734 AGCAAGTTTTAGGACCCCCG 59.962 55.000 0.00 0.00 37.58 5.73
99 100 0.963856 GCAAGTTTTAGGACCCCCGG 60.964 60.000 0.00 0.00 37.58 5.73
100 101 0.402887 CAAGTTTTAGGACCCCCGGT 59.597 55.000 0.00 0.00 39.44 5.28
101 102 0.402887 AAGTTTTAGGACCCCCGGTG 59.597 55.000 0.00 0.00 35.25 4.94
102 103 1.676635 GTTTTAGGACCCCCGGTGC 60.677 63.158 0.00 0.00 44.57 5.01
107 108 2.758434 GGACCCCCGGTGCTTTTA 59.242 61.111 0.00 0.00 40.95 1.52
108 109 1.075305 GGACCCCCGGTGCTTTTAA 59.925 57.895 0.00 0.00 40.95 1.52
109 110 1.246056 GGACCCCCGGTGCTTTTAAC 61.246 60.000 0.00 0.00 40.95 2.01
110 111 0.251033 GACCCCCGGTGCTTTTAACT 60.251 55.000 0.00 0.00 35.25 2.24
111 112 0.251033 ACCCCCGGTGCTTTTAACTC 60.251 55.000 0.00 0.00 32.98 3.01
112 113 0.037734 CCCCCGGTGCTTTTAACTCT 59.962 55.000 0.00 0.00 0.00 3.24
113 114 1.279846 CCCCCGGTGCTTTTAACTCTA 59.720 52.381 0.00 0.00 0.00 2.43
114 115 2.092592 CCCCCGGTGCTTTTAACTCTAT 60.093 50.000 0.00 0.00 0.00 1.98
115 116 3.617284 CCCCGGTGCTTTTAACTCTATT 58.383 45.455 0.00 0.00 0.00 1.73
116 117 4.014406 CCCCGGTGCTTTTAACTCTATTT 58.986 43.478 0.00 0.00 0.00 1.40
117 118 4.142469 CCCCGGTGCTTTTAACTCTATTTG 60.142 45.833 0.00 0.00 0.00 2.32
118 119 4.142469 CCCGGTGCTTTTAACTCTATTTGG 60.142 45.833 0.00 0.00 0.00 3.28
119 120 4.698304 CCGGTGCTTTTAACTCTATTTGGA 59.302 41.667 0.00 0.00 0.00 3.53
120 121 5.182380 CCGGTGCTTTTAACTCTATTTGGAA 59.818 40.000 0.00 0.00 0.00 3.53
121 122 6.127730 CCGGTGCTTTTAACTCTATTTGGAAT 60.128 38.462 0.00 0.00 0.00 3.01
122 123 7.066525 CCGGTGCTTTTAACTCTATTTGGAATA 59.933 37.037 0.00 0.00 0.00 1.75
123 124 8.122952 CGGTGCTTTTAACTCTATTTGGAATAG 58.877 37.037 2.07 2.07 0.00 1.73
124 125 8.957466 GGTGCTTTTAACTCTATTTGGAATAGT 58.043 33.333 7.38 0.00 0.00 2.12
133 134 8.017418 ACTCTATTTGGAATAGTTCTGAGAGG 57.983 38.462 7.38 0.00 0.00 3.69
134 135 7.841729 ACTCTATTTGGAATAGTTCTGAGAGGA 59.158 37.037 7.38 0.00 0.00 3.71
135 136 8.609617 TCTATTTGGAATAGTTCTGAGAGGAA 57.390 34.615 7.38 0.00 0.00 3.36
136 137 8.478877 TCTATTTGGAATAGTTCTGAGAGGAAC 58.521 37.037 7.38 0.00 44.02 3.62
143 144 2.694213 GTTCTGAGAGGAACTGGAAGC 58.306 52.381 0.00 0.00 41.55 3.86
144 145 0.891373 TCTGAGAGGAACTGGAAGCG 59.109 55.000 0.00 0.00 41.55 4.68
145 146 0.605589 CTGAGAGGAACTGGAAGCGT 59.394 55.000 0.00 0.00 41.55 5.07
146 147 1.001406 CTGAGAGGAACTGGAAGCGTT 59.999 52.381 0.00 0.00 41.55 4.84
147 148 1.416401 TGAGAGGAACTGGAAGCGTTT 59.584 47.619 0.00 0.00 41.55 3.60
148 149 2.070028 GAGAGGAACTGGAAGCGTTTC 58.930 52.381 3.02 3.02 41.55 2.78
149 150 0.790814 GAGGAACTGGAAGCGTTTCG 59.209 55.000 5.89 0.00 41.55 3.46
150 151 0.391597 AGGAACTGGAAGCGTTTCGA 59.608 50.000 5.89 0.97 37.18 3.71
151 152 0.790814 GGAACTGGAAGCGTTTCGAG 59.209 55.000 19.63 19.63 42.75 4.04
152 153 0.790814 GAACTGGAAGCGTTTCGAGG 59.209 55.000 23.64 11.10 41.76 4.63
153 154 0.106149 AACTGGAAGCGTTTCGAGGT 59.894 50.000 23.64 17.14 41.76 3.85
154 155 0.319641 ACTGGAAGCGTTTCGAGGTC 60.320 55.000 23.64 4.02 41.76 3.85
155 156 0.319555 CTGGAAGCGTTTCGAGGTCA 60.320 55.000 14.76 2.53 36.02 4.02
156 157 0.599204 TGGAAGCGTTTCGAGGTCAC 60.599 55.000 5.89 0.00 33.98 3.67
157 158 1.289800 GGAAGCGTTTCGAGGTCACC 61.290 60.000 5.89 0.00 33.98 4.02
158 159 1.615107 GAAGCGTTTCGAGGTCACCG 61.615 60.000 0.00 0.00 0.00 4.94
159 160 3.774702 GCGTTTCGAGGTCACCGC 61.775 66.667 0.00 0.00 0.00 5.68
160 161 2.355363 CGTTTCGAGGTCACCGCA 60.355 61.111 0.00 0.00 0.00 5.69
161 162 1.952133 CGTTTCGAGGTCACCGCAA 60.952 57.895 0.00 0.00 0.00 4.85
162 163 1.860078 GTTTCGAGGTCACCGCAAG 59.140 57.895 0.00 0.00 0.00 4.01
163 164 0.599204 GTTTCGAGGTCACCGCAAGA 60.599 55.000 0.00 0.00 43.02 3.02
164 165 0.319555 TTTCGAGGTCACCGCAAGAG 60.320 55.000 0.00 0.00 43.02 2.85
165 166 1.461091 TTCGAGGTCACCGCAAGAGT 61.461 55.000 0.00 0.00 43.02 3.24
166 167 1.006102 CGAGGTCACCGCAAGAGTT 60.006 57.895 0.00 0.00 43.02 3.01
167 168 0.600255 CGAGGTCACCGCAAGAGTTT 60.600 55.000 0.00 0.00 43.02 2.66
168 169 1.149148 GAGGTCACCGCAAGAGTTTC 58.851 55.000 0.00 0.00 43.02 2.78
169 170 0.600255 AGGTCACCGCAAGAGTTTCG 60.600 55.000 0.00 0.00 43.02 3.46
171 172 1.301401 TCACCGCAAGAGTTTCGGG 60.301 57.895 2.90 0.00 46.78 5.14
172 173 2.032071 ACCGCAAGAGTTTCGGGG 59.968 61.111 2.90 0.00 46.78 5.73
173 174 2.032071 CCGCAAGAGTTTCGGGGT 59.968 61.111 0.00 0.00 39.52 4.95
174 175 2.033194 CCGCAAGAGTTTCGGGGTC 61.033 63.158 0.00 0.00 39.52 4.46
175 176 1.004918 CGCAAGAGTTTCGGGGTCT 60.005 57.895 0.00 0.00 43.02 3.85
176 177 0.245539 CGCAAGAGTTTCGGGGTCTA 59.754 55.000 0.00 0.00 43.02 2.59
177 178 1.134788 CGCAAGAGTTTCGGGGTCTAT 60.135 52.381 0.00 0.00 43.02 1.98
178 179 2.552031 GCAAGAGTTTCGGGGTCTATC 58.448 52.381 0.00 0.00 0.00 2.08
179 180 2.093658 GCAAGAGTTTCGGGGTCTATCA 60.094 50.000 0.00 0.00 0.00 2.15
180 181 3.786635 CAAGAGTTTCGGGGTCTATCAG 58.213 50.000 0.00 0.00 0.00 2.90
181 182 2.389715 AGAGTTTCGGGGTCTATCAGG 58.610 52.381 0.00 0.00 0.00 3.86
182 183 0.831307 AGTTTCGGGGTCTATCAGGC 59.169 55.000 0.00 0.00 0.00 4.85
183 184 0.539986 GTTTCGGGGTCTATCAGGCA 59.460 55.000 0.00 0.00 0.00 4.75
184 185 1.065709 GTTTCGGGGTCTATCAGGCAA 60.066 52.381 0.00 0.00 0.00 4.52
185 186 1.507140 TTCGGGGTCTATCAGGCAAT 58.493 50.000 0.00 0.00 0.00 3.56
186 187 2.391926 TCGGGGTCTATCAGGCAATA 57.608 50.000 0.00 0.00 0.00 1.90
187 188 1.968493 TCGGGGTCTATCAGGCAATAC 59.032 52.381 0.00 0.00 0.00 1.89
188 189 1.002087 CGGGGTCTATCAGGCAATACC 59.998 57.143 0.00 0.00 39.61 2.73
189 190 1.002087 GGGGTCTATCAGGCAATACCG 59.998 57.143 0.00 0.00 46.52 4.02
190 191 1.968493 GGGTCTATCAGGCAATACCGA 59.032 52.381 0.00 0.00 46.52 4.69
191 192 2.028930 GGGTCTATCAGGCAATACCGAG 60.029 54.545 0.00 0.00 46.52 4.63
192 193 2.628657 GGTCTATCAGGCAATACCGAGT 59.371 50.000 0.00 0.00 46.52 4.18
193 194 3.825014 GGTCTATCAGGCAATACCGAGTA 59.175 47.826 0.00 0.00 46.52 2.59
194 195 4.463186 GGTCTATCAGGCAATACCGAGTAT 59.537 45.833 0.00 0.00 46.52 2.12
195 196 5.047235 GGTCTATCAGGCAATACCGAGTATT 60.047 44.000 4.14 4.14 46.52 1.89
196 197 6.456501 GTCTATCAGGCAATACCGAGTATTT 58.543 40.000 6.57 0.00 46.52 1.40
197 198 6.586844 GTCTATCAGGCAATACCGAGTATTTC 59.413 42.308 6.57 3.31 46.52 2.17
198 199 4.067972 TCAGGCAATACCGAGTATTTCC 57.932 45.455 13.56 13.56 46.52 3.13
199 200 3.452990 TCAGGCAATACCGAGTATTTCCA 59.547 43.478 19.44 5.46 41.74 3.53
200 201 4.080807 TCAGGCAATACCGAGTATTTCCAA 60.081 41.667 19.44 10.05 41.74 3.53
201 202 4.821805 CAGGCAATACCGAGTATTTCCAAT 59.178 41.667 19.44 5.46 41.74 3.16
202 203 5.995282 CAGGCAATACCGAGTATTTCCAATA 59.005 40.000 19.44 0.00 41.74 1.90
203 204 6.485313 CAGGCAATACCGAGTATTTCCAATAA 59.515 38.462 19.44 0.00 41.74 1.40
204 205 7.012894 CAGGCAATACCGAGTATTTCCAATAAA 59.987 37.037 19.44 0.00 41.74 1.40
205 206 7.724061 AGGCAATACCGAGTATTTCCAATAAAT 59.276 33.333 19.44 0.00 41.74 1.40
206 207 8.357402 GGCAATACCGAGTATTTCCAATAAATT 58.643 33.333 15.34 0.00 40.03 1.82
248 249 4.916041 TCCTGATGGAAATATGCCCTAG 57.084 45.455 0.00 0.00 39.87 3.02
249 250 4.502415 TCCTGATGGAAATATGCCCTAGA 58.498 43.478 0.00 0.00 39.87 2.43
250 251 4.533707 TCCTGATGGAAATATGCCCTAGAG 59.466 45.833 0.00 0.00 39.87 2.43
251 252 4.324099 CCTGATGGAAATATGCCCTAGAGG 60.324 50.000 0.00 0.00 34.98 3.69
267 268 7.971183 CCCTAGAGGCAATAATAAAGTTCTC 57.029 40.000 0.00 0.00 0.00 2.87
268 269 6.647067 CCCTAGAGGCAATAATAAAGTTCTCG 59.353 42.308 0.00 0.00 0.00 4.04
269 270 6.647067 CCTAGAGGCAATAATAAAGTTCTCGG 59.353 42.308 0.00 0.00 0.00 4.63
270 271 5.368989 AGAGGCAATAATAAAGTTCTCGGG 58.631 41.667 0.00 0.00 0.00 5.14
271 272 4.461198 AGGCAATAATAAAGTTCTCGGGG 58.539 43.478 0.00 0.00 0.00 5.73
272 273 3.568430 GGCAATAATAAAGTTCTCGGGGG 59.432 47.826 0.00 0.00 0.00 5.40
319 320 2.079941 CGAACGACGCTTCAAAAACA 57.920 45.000 0.00 0.00 34.51 2.83
320 321 2.635444 CGAACGACGCTTCAAAAACAT 58.365 42.857 0.00 0.00 34.51 2.71
321 322 2.645647 CGAACGACGCTTCAAAAACATC 59.354 45.455 0.00 0.00 34.51 3.06
322 323 2.294479 ACGACGCTTCAAAAACATCG 57.706 45.000 0.00 0.00 0.00 3.84
323 324 1.070175 ACGACGCTTCAAAAACATCGG 60.070 47.619 0.00 0.00 32.56 4.18
324 325 1.724654 CGACGCTTCAAAAACATCGGG 60.725 52.381 0.00 0.00 0.00 5.14
325 326 0.596082 ACGCTTCAAAAACATCGGGG 59.404 50.000 0.00 0.00 0.00 5.73
326 327 0.732538 CGCTTCAAAAACATCGGGGC 60.733 55.000 0.00 0.00 0.00 5.80
327 328 0.389817 GCTTCAAAAACATCGGGGCC 60.390 55.000 0.00 0.00 0.00 5.80
328 329 0.965439 CTTCAAAAACATCGGGGCCA 59.035 50.000 4.39 0.00 0.00 5.36
329 330 0.965439 TTCAAAAACATCGGGGCCAG 59.035 50.000 4.39 0.00 0.00 4.85
330 331 1.079888 CAAAAACATCGGGGCCAGC 60.080 57.895 4.39 0.00 0.00 4.85
331 332 1.532794 AAAAACATCGGGGCCAGCA 60.533 52.632 4.39 0.00 0.00 4.41
332 333 1.118356 AAAAACATCGGGGCCAGCAA 61.118 50.000 4.39 0.00 0.00 3.91
333 334 1.815817 AAAACATCGGGGCCAGCAAC 61.816 55.000 4.39 0.00 0.00 4.17
343 344 2.361610 CCAGCAACGCCCCTCAAT 60.362 61.111 0.00 0.00 0.00 2.57
344 345 2.409870 CCAGCAACGCCCCTCAATC 61.410 63.158 0.00 0.00 0.00 2.67
345 346 2.044946 AGCAACGCCCCTCAATCC 60.045 61.111 0.00 0.00 0.00 3.01
346 347 3.508840 GCAACGCCCCTCAATCCG 61.509 66.667 0.00 0.00 0.00 4.18
347 348 2.824041 CAACGCCCCTCAATCCGG 60.824 66.667 0.00 0.00 0.00 5.14
348 349 3.006728 AACGCCCCTCAATCCGGA 61.007 61.111 6.61 6.61 0.00 5.14
349 350 2.375345 AACGCCCCTCAATCCGGAT 61.375 57.895 12.38 12.38 0.00 4.18
350 351 2.031163 CGCCCCTCAATCCGGATC 59.969 66.667 19.43 1.79 0.00 3.36
351 352 2.031163 GCCCCTCAATCCGGATCG 59.969 66.667 19.43 6.76 0.00 3.69
352 353 2.507854 GCCCCTCAATCCGGATCGA 61.508 63.158 19.43 11.86 0.00 3.59
353 354 1.668294 CCCCTCAATCCGGATCGAG 59.332 63.158 23.27 23.27 0.00 4.04
354 355 1.115930 CCCCTCAATCCGGATCGAGT 61.116 60.000 26.80 6.09 0.00 4.18
355 356 0.315568 CCCTCAATCCGGATCGAGTC 59.684 60.000 26.80 0.00 0.00 3.36
356 357 0.315568 CCTCAATCCGGATCGAGTCC 59.684 60.000 26.80 0.00 44.10 3.85
357 358 0.315568 CTCAATCCGGATCGAGTCCC 59.684 60.000 22.16 0.81 44.77 4.46
358 359 0.106167 TCAATCCGGATCGAGTCCCT 60.106 55.000 19.43 0.00 44.77 4.20
359 360 0.315568 CAATCCGGATCGAGTCCCTC 59.684 60.000 19.43 0.00 44.77 4.30
360 361 0.106167 AATCCGGATCGAGTCCCTCA 60.106 55.000 19.43 0.00 44.77 3.86
361 362 0.106167 ATCCGGATCGAGTCCCTCAA 60.106 55.000 12.38 0.00 44.77 3.02
362 363 1.035932 TCCGGATCGAGTCCCTCAAC 61.036 60.000 0.00 0.00 44.77 3.18
363 364 1.038130 CCGGATCGAGTCCCTCAACT 61.038 60.000 0.00 0.00 44.77 3.16
364 365 0.382515 CGGATCGAGTCCCTCAACTC 59.617 60.000 7.91 0.00 44.77 3.01
368 369 2.579738 GAGTCCCTCAACTCGGCC 59.420 66.667 0.00 0.00 36.61 6.13
369 370 3.358076 GAGTCCCTCAACTCGGCCG 62.358 68.421 22.12 22.12 36.61 6.13
370 371 3.379445 GTCCCTCAACTCGGCCGA 61.379 66.667 29.03 29.03 0.00 5.54
371 372 2.602267 TCCCTCAACTCGGCCGAA 60.602 61.111 30.53 13.67 0.00 4.30
372 373 2.434359 CCCTCAACTCGGCCGAAC 60.434 66.667 30.53 0.00 0.00 3.95
373 374 2.657237 CCTCAACTCGGCCGAACT 59.343 61.111 30.53 16.31 0.00 3.01
374 375 1.446272 CCTCAACTCGGCCGAACTC 60.446 63.158 30.53 0.00 0.00 3.01
375 376 1.289066 CTCAACTCGGCCGAACTCA 59.711 57.895 30.53 12.61 0.00 3.41
376 377 1.006571 TCAACTCGGCCGAACTCAC 60.007 57.895 30.53 0.00 0.00 3.51
377 378 2.027625 CAACTCGGCCGAACTCACC 61.028 63.158 30.53 0.00 0.00 4.02
378 379 2.504274 AACTCGGCCGAACTCACCA 61.504 57.895 30.53 3.64 0.00 4.17
379 380 1.827399 AACTCGGCCGAACTCACCAT 61.827 55.000 30.53 6.08 0.00 3.55
380 381 1.519455 CTCGGCCGAACTCACCATC 60.519 63.158 30.53 0.00 0.00 3.51
381 382 2.511600 CGGCCGAACTCACCATCC 60.512 66.667 24.07 0.00 0.00 3.51
382 383 2.124695 GGCCGAACTCACCATCCC 60.125 66.667 0.00 0.00 0.00 3.85
383 384 2.511600 GCCGAACTCACCATCCCG 60.512 66.667 0.00 0.00 0.00 5.14
384 385 2.186903 CCGAACTCACCATCCCGG 59.813 66.667 0.00 0.00 42.50 5.73
385 386 2.511600 CGAACTCACCATCCCGGC 60.512 66.667 0.00 0.00 39.03 6.13
386 387 2.124695 GAACTCACCATCCCGGCC 60.125 66.667 0.00 0.00 39.03 6.13
387 388 4.096003 AACTCACCATCCCGGCCG 62.096 66.667 21.04 21.04 39.03 6.13
411 412 4.749310 CGGCTCTGTTCGGCTGCT 62.749 66.667 0.00 0.00 0.00 4.24
412 413 2.817396 GGCTCTGTTCGGCTGCTC 60.817 66.667 0.00 0.00 0.00 4.26
413 414 2.817396 GCTCTGTTCGGCTGCTCC 60.817 66.667 0.00 0.00 0.00 4.70
414 415 2.659016 CTCTGTTCGGCTGCTCCA 59.341 61.111 0.00 0.00 34.01 3.86
415 416 1.447489 CTCTGTTCGGCTGCTCCAG 60.447 63.158 0.00 1.14 34.01 3.86
427 428 3.554342 CTCCAGCCGGCCTGCTAT 61.554 66.667 26.15 0.00 40.32 2.97
428 429 3.821636 CTCCAGCCGGCCTGCTATG 62.822 68.421 26.15 15.54 40.32 2.23
433 434 2.969238 CCGGCCTGCTATGCGAAG 60.969 66.667 0.00 0.00 0.00 3.79
434 435 2.202932 CGGCCTGCTATGCGAAGT 60.203 61.111 0.00 0.00 0.00 3.01
435 436 2.240500 CGGCCTGCTATGCGAAGTC 61.241 63.158 0.00 0.00 0.00 3.01
436 437 1.153369 GGCCTGCTATGCGAAGTCA 60.153 57.895 0.00 0.00 0.00 3.41
437 438 0.744414 GGCCTGCTATGCGAAGTCAA 60.744 55.000 0.00 0.00 0.00 3.18
438 439 0.375106 GCCTGCTATGCGAAGTCAAC 59.625 55.000 0.00 0.00 0.00 3.18
439 440 2.009042 GCCTGCTATGCGAAGTCAACT 61.009 52.381 0.00 0.00 0.00 3.16
440 441 2.738643 GCCTGCTATGCGAAGTCAACTA 60.739 50.000 0.00 0.00 0.00 2.24
441 442 2.860735 CCTGCTATGCGAAGTCAACTAC 59.139 50.000 0.00 0.00 0.00 2.73
442 443 2.526077 TGCTATGCGAAGTCAACTACG 58.474 47.619 0.00 0.00 0.00 3.51
443 444 1.852895 GCTATGCGAAGTCAACTACGG 59.147 52.381 0.00 0.00 0.00 4.02
444 445 1.852895 CTATGCGAAGTCAACTACGGC 59.147 52.381 0.00 0.00 0.00 5.68
445 446 1.076533 ATGCGAAGTCAACTACGGCG 61.077 55.000 4.80 4.80 34.17 6.46
446 447 1.731969 GCGAAGTCAACTACGGCGT 60.732 57.895 19.64 19.64 33.76 5.68
447 448 1.671880 GCGAAGTCAACTACGGCGTC 61.672 60.000 19.21 0.00 33.76 5.19
448 449 0.109873 CGAAGTCAACTACGGCGTCT 60.110 55.000 19.21 2.62 0.00 4.18
449 450 1.615502 GAAGTCAACTACGGCGTCTC 58.384 55.000 19.21 1.78 0.00 3.36
450 451 0.956633 AAGTCAACTACGGCGTCTCA 59.043 50.000 19.21 0.00 0.00 3.27
451 452 1.174783 AGTCAACTACGGCGTCTCAT 58.825 50.000 19.21 0.00 0.00 2.90
452 453 1.132643 AGTCAACTACGGCGTCTCATC 59.867 52.381 19.21 4.31 0.00 2.92
453 454 1.132643 GTCAACTACGGCGTCTCATCT 59.867 52.381 19.21 0.00 0.00 2.90
454 455 1.132453 TCAACTACGGCGTCTCATCTG 59.868 52.381 19.21 6.97 0.00 2.90
455 456 1.132453 CAACTACGGCGTCTCATCTGA 59.868 52.381 19.21 0.00 0.00 3.27
456 457 0.733729 ACTACGGCGTCTCATCTGAC 59.266 55.000 19.21 0.00 0.00 3.51
457 458 0.733150 CTACGGCGTCTCATCTGACA 59.267 55.000 19.21 0.00 36.82 3.58
458 459 0.450583 TACGGCGTCTCATCTGACAC 59.549 55.000 19.21 0.00 36.82 3.67
459 460 1.869574 CGGCGTCTCATCTGACACG 60.870 63.158 0.00 3.97 39.03 4.49
460 461 1.506718 GGCGTCTCATCTGACACGA 59.493 57.895 11.40 0.00 38.45 4.35
461 462 0.798771 GGCGTCTCATCTGACACGAC 60.799 60.000 11.40 5.24 38.45 4.34
462 463 0.109735 GCGTCTCATCTGACACGACA 60.110 55.000 11.40 0.00 38.45 4.35
463 464 1.607713 CGTCTCATCTGACACGACAC 58.392 55.000 2.33 0.00 38.45 3.67
464 465 1.729472 CGTCTCATCTGACACGACACC 60.729 57.143 2.33 0.00 38.45 4.16
465 466 0.521735 TCTCATCTGACACGACACCG 59.478 55.000 0.00 0.00 42.50 4.94
466 467 0.521735 CTCATCTGACACGACACCGA 59.478 55.000 0.00 0.00 39.50 4.69
467 468 0.240145 TCATCTGACACGACACCGAC 59.760 55.000 0.00 0.00 39.50 4.79
468 469 0.039527 CATCTGACACGACACCGACA 60.040 55.000 0.00 0.00 39.50 4.35
469 470 0.671796 ATCTGACACGACACCGACAA 59.328 50.000 0.00 0.00 39.50 3.18
470 471 0.030235 TCTGACACGACACCGACAAG 59.970 55.000 0.00 0.00 39.50 3.16
471 472 0.030235 CTGACACGACACCGACAAGA 59.970 55.000 0.00 0.00 39.50 3.02
472 473 0.248743 TGACACGACACCGACAAGAC 60.249 55.000 0.00 0.00 39.50 3.01
473 474 1.266786 GACACGACACCGACAAGACG 61.267 60.000 0.00 0.00 39.50 4.18
480 481 4.104143 CCGACAAGACGGCCATAC 57.896 61.111 2.24 0.00 46.20 2.39
481 482 1.520787 CCGACAAGACGGCCATACC 60.521 63.158 2.24 0.00 46.20 2.73
490 491 4.157120 GGCCATACCGCGACCACT 62.157 66.667 8.23 0.00 0.00 4.00
491 492 2.890474 GCCATACCGCGACCACTG 60.890 66.667 8.23 0.00 0.00 3.66
492 493 2.577059 CCATACCGCGACCACTGT 59.423 61.111 8.23 0.00 0.00 3.55
493 494 1.079405 CCATACCGCGACCACTGTT 60.079 57.895 8.23 0.00 0.00 3.16
494 495 1.358725 CCATACCGCGACCACTGTTG 61.359 60.000 8.23 0.00 0.00 3.33
495 496 1.740296 ATACCGCGACCACTGTTGC 60.740 57.895 8.23 0.00 46.65 4.17
499 500 3.972227 GCGACCACTGTTGCTGAT 58.028 55.556 0.00 0.00 46.60 2.90
500 501 3.137484 GCGACCACTGTTGCTGATA 57.863 52.632 0.00 0.00 46.60 2.15
501 502 1.438651 GCGACCACTGTTGCTGATAA 58.561 50.000 0.00 0.00 46.60 1.75
502 503 1.804151 GCGACCACTGTTGCTGATAAA 59.196 47.619 0.00 0.00 46.60 1.40
503 504 2.159653 GCGACCACTGTTGCTGATAAAG 60.160 50.000 0.00 0.00 46.60 1.85
517 518 4.826500 CTGATAAAGCATACACTGTTCGC 58.173 43.478 0.00 0.00 0.00 4.70
518 519 4.503910 TGATAAAGCATACACTGTTCGCT 58.496 39.130 0.32 0.32 33.45 4.93
519 520 4.566759 TGATAAAGCATACACTGTTCGCTC 59.433 41.667 5.70 0.00 31.17 5.03
520 521 1.350193 AAGCATACACTGTTCGCTCG 58.650 50.000 5.70 0.00 31.17 5.03
521 522 0.243907 AGCATACACTGTTCGCTCGT 59.756 50.000 0.32 0.00 0.00 4.18
522 523 0.640768 GCATACACTGTTCGCTCGTC 59.359 55.000 0.00 0.00 0.00 4.20
523 524 1.977188 CATACACTGTTCGCTCGTCA 58.023 50.000 0.00 0.00 0.00 4.35
524 525 1.649171 CATACACTGTTCGCTCGTCAC 59.351 52.381 0.00 0.00 0.00 3.67
525 526 0.664224 TACACTGTTCGCTCGTCACA 59.336 50.000 0.00 0.00 0.00 3.58
526 527 0.870307 ACACTGTTCGCTCGTCACAC 60.870 55.000 0.00 0.00 0.00 3.82
527 528 1.657487 ACTGTTCGCTCGTCACACG 60.657 57.895 0.00 0.00 44.19 4.49
528 529 2.988549 CTGTTCGCTCGTCACACGC 61.989 63.158 0.00 0.00 42.21 5.34
534 535 3.545481 CTCGTCACACGCGGCATC 61.545 66.667 12.47 0.00 42.21 3.91
535 536 4.350441 TCGTCACACGCGGCATCA 62.350 61.111 12.47 0.00 42.21 3.07
536 537 3.188100 CGTCACACGCGGCATCAT 61.188 61.111 12.47 0.00 33.65 2.45
537 538 2.703409 GTCACACGCGGCATCATC 59.297 61.111 12.47 0.00 0.00 2.92
538 539 1.811266 GTCACACGCGGCATCATCT 60.811 57.895 12.47 0.00 0.00 2.90
539 540 0.527600 GTCACACGCGGCATCATCTA 60.528 55.000 12.47 0.00 0.00 1.98
540 541 0.527600 TCACACGCGGCATCATCTAC 60.528 55.000 12.47 0.00 0.00 2.59
541 542 0.805711 CACACGCGGCATCATCTACA 60.806 55.000 12.47 0.00 0.00 2.74
542 543 0.108377 ACACGCGGCATCATCTACAA 60.108 50.000 12.47 0.00 0.00 2.41
543 544 1.220529 CACGCGGCATCATCTACAAT 58.779 50.000 12.47 0.00 0.00 2.71
544 545 1.070376 CACGCGGCATCATCTACAATG 60.070 52.381 12.47 0.00 0.00 2.82
545 546 1.220529 CGCGGCATCATCTACAATGT 58.779 50.000 0.00 0.00 0.00 2.71
546 547 2.223947 ACGCGGCATCATCTACAATGTA 60.224 45.455 12.47 0.00 0.00 2.29
547 548 2.155732 CGCGGCATCATCTACAATGTAC 59.844 50.000 0.00 0.00 0.00 2.90
548 549 3.393800 GCGGCATCATCTACAATGTACT 58.606 45.455 0.00 0.00 0.00 2.73
549 550 3.809832 GCGGCATCATCTACAATGTACTT 59.190 43.478 0.00 0.00 0.00 2.24
550 551 4.273480 GCGGCATCATCTACAATGTACTTT 59.727 41.667 0.00 0.00 0.00 2.66
551 552 5.741425 CGGCATCATCTACAATGTACTTTG 58.259 41.667 17.42 17.42 0.00 2.77
552 553 5.294306 CGGCATCATCTACAATGTACTTTGT 59.706 40.000 25.07 25.07 42.31 2.83
553 554 6.510157 CGGCATCATCTACAATGTACTTTGTC 60.510 42.308 25.36 11.92 40.25 3.18
554 555 6.238484 GGCATCATCTACAATGTACTTTGTCC 60.238 42.308 25.36 16.02 40.25 4.02
555 556 6.238484 GCATCATCTACAATGTACTTTGTCCC 60.238 42.308 25.36 7.37 40.25 4.46
556 557 5.741011 TCATCTACAATGTACTTTGTCCCC 58.259 41.667 25.36 0.00 40.25 4.81
557 558 5.487488 TCATCTACAATGTACTTTGTCCCCT 59.513 40.000 25.36 10.36 40.25 4.79
558 559 5.836024 TCTACAATGTACTTTGTCCCCTT 57.164 39.130 25.36 7.59 40.25 3.95
559 560 5.556915 TCTACAATGTACTTTGTCCCCTTG 58.443 41.667 25.36 12.75 40.25 3.61
560 561 3.496331 ACAATGTACTTTGTCCCCTTGG 58.504 45.455 18.60 0.00 34.83 3.61
561 562 2.215942 ATGTACTTTGTCCCCTTGGC 57.784 50.000 0.00 0.00 0.00 4.52
562 563 0.847373 TGTACTTTGTCCCCTTGGCA 59.153 50.000 0.00 0.00 0.00 4.92
563 564 1.202879 TGTACTTTGTCCCCTTGGCAG 60.203 52.381 0.00 0.00 0.00 4.85
564 565 1.073284 GTACTTTGTCCCCTTGGCAGA 59.927 52.381 0.00 0.00 0.00 4.26
565 566 0.178990 ACTTTGTCCCCTTGGCAGAC 60.179 55.000 0.00 0.00 0.00 3.51
566 567 0.895559 CTTTGTCCCCTTGGCAGACC 60.896 60.000 2.61 0.00 0.00 3.85
567 568 2.366153 TTTGTCCCCTTGGCAGACCC 62.366 60.000 2.61 0.00 33.59 4.46
568 569 3.256960 GTCCCCTTGGCAGACCCA 61.257 66.667 0.00 0.00 43.51 4.51
569 570 2.935481 TCCCCTTGGCAGACCCAG 60.935 66.667 0.00 0.00 46.39 4.45
570 571 4.052518 CCCCTTGGCAGACCCAGG 62.053 72.222 0.00 0.00 46.39 4.45
571 572 2.935481 CCCTTGGCAGACCCAGGA 60.935 66.667 3.71 0.00 46.39 3.86
572 573 2.673523 CCTTGGCAGACCCAGGAG 59.326 66.667 0.00 0.00 46.39 3.69
573 574 2.045536 CTTGGCAGACCCAGGAGC 60.046 66.667 0.00 0.00 46.39 4.70
574 575 2.853542 TTGGCAGACCCAGGAGCA 60.854 61.111 0.00 0.00 46.39 4.26
575 576 2.416107 CTTGGCAGACCCAGGAGCAA 62.416 60.000 0.00 0.00 46.39 3.91
576 577 1.792757 TTGGCAGACCCAGGAGCAAT 61.793 55.000 0.00 0.00 46.39 3.56
577 578 0.913934 TGGCAGACCCAGGAGCAATA 60.914 55.000 0.00 0.00 39.18 1.90
578 579 0.464554 GGCAGACCCAGGAGCAATAC 60.465 60.000 0.00 0.00 0.00 1.89
579 580 0.464554 GCAGACCCAGGAGCAATACC 60.465 60.000 0.00 0.00 0.00 2.73
580 581 1.207791 CAGACCCAGGAGCAATACCT 58.792 55.000 0.00 0.00 38.40 3.08
581 582 2.398588 CAGACCCAGGAGCAATACCTA 58.601 52.381 0.00 0.00 35.84 3.08
582 583 2.366916 CAGACCCAGGAGCAATACCTAG 59.633 54.545 0.00 0.00 35.84 3.02
583 584 1.070914 GACCCAGGAGCAATACCTAGC 59.929 57.143 0.00 0.00 35.84 3.42
584 585 0.398318 CCCAGGAGCAATACCTAGCC 59.602 60.000 0.00 0.00 35.84 3.93
585 586 1.428869 CCAGGAGCAATACCTAGCCT 58.571 55.000 0.00 0.00 35.84 4.58
586 587 2.609747 CCAGGAGCAATACCTAGCCTA 58.390 52.381 0.00 0.00 35.84 3.93
587 588 2.564947 CCAGGAGCAATACCTAGCCTAG 59.435 54.545 0.00 0.00 35.84 3.02
588 589 2.028567 CAGGAGCAATACCTAGCCTAGC 60.029 54.545 0.00 0.00 35.84 3.42
589 590 2.158234 AGGAGCAATACCTAGCCTAGCT 60.158 50.000 0.00 0.00 43.41 3.32
590 591 3.076182 AGGAGCAATACCTAGCCTAGCTA 59.924 47.826 0.00 0.00 40.44 3.32
591 592 4.027437 GGAGCAATACCTAGCCTAGCTAT 58.973 47.826 0.00 0.00 40.54 2.97
592 593 4.098807 GGAGCAATACCTAGCCTAGCTATC 59.901 50.000 0.00 0.00 40.54 2.08
593 594 4.678256 AGCAATACCTAGCCTAGCTATCA 58.322 43.478 0.00 0.00 40.54 2.15
594 595 5.087323 AGCAATACCTAGCCTAGCTATCAA 58.913 41.667 0.00 0.00 40.54 2.57
595 596 5.186797 AGCAATACCTAGCCTAGCTATCAAG 59.813 44.000 0.00 0.00 40.54 3.02
624 625 3.641439 GCTTGTGATGTAAGCTACACG 57.359 47.619 0.00 0.00 45.34 4.49
625 626 2.993899 GCTTGTGATGTAAGCTACACGT 59.006 45.455 0.00 0.00 45.34 4.49
626 627 3.432252 GCTTGTGATGTAAGCTACACGTT 59.568 43.478 0.00 0.00 45.34 3.99
627 628 4.666655 GCTTGTGATGTAAGCTACACGTTG 60.667 45.833 0.00 0.00 45.34 4.10
628 629 3.985008 TGTGATGTAAGCTACACGTTGT 58.015 40.909 0.00 0.00 42.23 3.32
629 630 5.123805 TGTGATGTAAGCTACACGTTGTA 57.876 39.130 0.00 0.00 42.23 2.41
640 641 2.968675 ACACGTTGTAGCTTACATCCC 58.031 47.619 0.00 0.00 38.68 3.85
641 642 2.300723 ACACGTTGTAGCTTACATCCCA 59.699 45.455 0.00 0.00 38.68 4.37
642 643 3.244284 ACACGTTGTAGCTTACATCCCAA 60.244 43.478 0.00 0.00 38.68 4.12
643 644 3.370978 CACGTTGTAGCTTACATCCCAAG 59.629 47.826 0.00 0.00 38.68 3.61
649 650 1.533625 GCTTACATCCCAAGCACACA 58.466 50.000 2.34 0.00 46.17 3.72
650 651 1.200020 GCTTACATCCCAAGCACACAC 59.800 52.381 2.34 0.00 46.17 3.82
651 652 1.812571 CTTACATCCCAAGCACACACC 59.187 52.381 0.00 0.00 0.00 4.16
652 653 0.037590 TACATCCCAAGCACACACCC 59.962 55.000 0.00 0.00 0.00 4.61
653 654 1.228521 CATCCCAAGCACACACCCA 60.229 57.895 0.00 0.00 0.00 4.51
654 655 0.612732 CATCCCAAGCACACACCCAT 60.613 55.000 0.00 0.00 0.00 4.00
655 656 0.612732 ATCCCAAGCACACACCCATG 60.613 55.000 0.00 0.00 0.00 3.66
656 657 2.652530 CCAAGCACACACCCATGC 59.347 61.111 0.00 0.00 42.39 4.06
657 658 2.652530 CAAGCACACACCCATGCC 59.347 61.111 0.00 0.00 43.12 4.40
658 659 2.601367 AAGCACACACCCATGCCC 60.601 61.111 0.00 0.00 43.12 5.36
659 660 3.449494 AAGCACACACCCATGCCCA 62.449 57.895 0.00 0.00 43.12 5.36
660 661 3.683937 GCACACACCCATGCCCAC 61.684 66.667 0.00 0.00 35.73 4.61
661 662 2.990967 CACACACCCATGCCCACC 60.991 66.667 0.00 0.00 0.00 4.61
662 663 3.185203 ACACACCCATGCCCACCT 61.185 61.111 0.00 0.00 0.00 4.00
663 664 1.850289 ACACACCCATGCCCACCTA 60.850 57.895 0.00 0.00 0.00 3.08
664 665 1.077501 CACACCCATGCCCACCTAG 60.078 63.158 0.00 0.00 0.00 3.02
665 666 2.124151 CACCCATGCCCACCTAGC 60.124 66.667 0.00 0.00 0.00 3.42
666 667 2.286425 ACCCATGCCCACCTAGCT 60.286 61.111 0.00 0.00 0.00 3.32
667 668 1.930656 ACCCATGCCCACCTAGCTT 60.931 57.895 0.00 0.00 0.00 3.74
668 669 1.307647 CCCATGCCCACCTAGCTTT 59.692 57.895 0.00 0.00 0.00 3.51
669 670 0.550914 CCCATGCCCACCTAGCTTTA 59.449 55.000 0.00 0.00 0.00 1.85
670 671 1.477558 CCCATGCCCACCTAGCTTTAG 60.478 57.143 0.00 0.00 0.00 1.85
671 672 1.477558 CCATGCCCACCTAGCTTTAGG 60.478 57.143 0.62 0.62 42.86 2.69
691 692 3.771798 GGTGTAAGCTAGCTCACACTAC 58.228 50.000 37.84 26.40 40.82 2.73
692 693 3.192844 GGTGTAAGCTAGCTCACACTACA 59.807 47.826 37.84 28.24 40.82 2.74
693 694 4.321750 GGTGTAAGCTAGCTCACACTACAA 60.322 45.833 37.84 16.82 40.82 2.41
694 695 5.227908 GTGTAAGCTAGCTCACACTACAAA 58.772 41.667 34.59 10.65 38.56 2.83
695 696 5.346281 GTGTAAGCTAGCTCACACTACAAAG 59.654 44.000 34.59 0.00 38.56 2.77
696 697 4.608948 AAGCTAGCTCACACTACAAAGT 57.391 40.909 19.65 0.00 35.91 2.66
697 698 4.181309 AGCTAGCTCACACTACAAAGTC 57.819 45.455 12.68 0.00 31.97 3.01
698 699 3.574396 AGCTAGCTCACACTACAAAGTCA 59.426 43.478 12.68 0.00 31.97 3.41
699 700 4.039245 AGCTAGCTCACACTACAAAGTCAA 59.961 41.667 12.68 0.00 31.97 3.18
700 701 4.150804 GCTAGCTCACACTACAAAGTCAAC 59.849 45.833 7.70 0.00 31.97 3.18
701 702 4.137116 AGCTCACACTACAAAGTCAACA 57.863 40.909 0.00 0.00 31.97 3.33
702 703 4.708177 AGCTCACACTACAAAGTCAACAT 58.292 39.130 0.00 0.00 31.97 2.71
703 704 4.752101 AGCTCACACTACAAAGTCAACATC 59.248 41.667 0.00 0.00 31.97 3.06
704 705 4.083802 GCTCACACTACAAAGTCAACATCC 60.084 45.833 0.00 0.00 31.97 3.51
705 706 5.029807 TCACACTACAAAGTCAACATCCA 57.970 39.130 0.00 0.00 31.97 3.41
706 707 5.620206 TCACACTACAAAGTCAACATCCAT 58.380 37.500 0.00 0.00 31.97 3.41
707 708 5.700832 TCACACTACAAAGTCAACATCCATC 59.299 40.000 0.00 0.00 31.97 3.51
708 709 5.003804 ACACTACAAAGTCAACATCCATCC 58.996 41.667 0.00 0.00 31.97 3.51
709 710 5.003160 CACTACAAAGTCAACATCCATCCA 58.997 41.667 0.00 0.00 31.97 3.41
710 711 5.649395 CACTACAAAGTCAACATCCATCCAT 59.351 40.000 0.00 0.00 31.97 3.41
711 712 6.151648 CACTACAAAGTCAACATCCATCCATT 59.848 38.462 0.00 0.00 31.97 3.16
712 713 5.649782 ACAAAGTCAACATCCATCCATTC 57.350 39.130 0.00 0.00 0.00 2.67
713 714 5.078949 ACAAAGTCAACATCCATCCATTCA 58.921 37.500 0.00 0.00 0.00 2.57
714 715 5.718130 ACAAAGTCAACATCCATCCATTCAT 59.282 36.000 0.00 0.00 0.00 2.57
1110 1111 2.048127 GGAGGACGAAAGCAGCGT 60.048 61.111 0.00 0.00 45.79 5.07
1185 1186 4.487019 GAGGTCAGTACAGTGAGTTTAGC 58.513 47.826 0.00 0.00 0.00 3.09
1282 1283 1.819305 GCTTCTGCAGGTCCCTTTCAA 60.819 52.381 15.13 0.00 39.41 2.69
1777 1782 4.876107 TGTTGGTGTTGTTGTTGTTTTTGT 59.124 33.333 0.00 0.00 0.00 2.83
1896 1901 1.269723 GCCAAAACTGCTAGGGTGAAC 59.730 52.381 0.00 0.00 0.00 3.18
1941 1946 5.026121 ACTATCCACCATCTGACAGAAGAA 58.974 41.667 9.70 0.00 0.00 2.52
1989 1994 2.393271 AGCTAGTCCAAGATGTGCAC 57.607 50.000 10.75 10.75 0.00 4.57
1993 1998 0.969149 AGTCCAAGATGTGCACGAGA 59.031 50.000 13.13 0.00 0.00 4.04
2301 2306 5.012561 AGAGCTAACAAAGTGTCAGGAGAAT 59.987 40.000 0.00 0.00 0.00 2.40
2572 2577 5.031066 TGTACTAATGGTGAACTATGGCC 57.969 43.478 0.00 0.00 0.00 5.36
2911 3000 7.334671 GCTTAAACTAGAGCAACTAAACCAGAT 59.665 37.037 0.00 0.00 38.73 2.90
3146 3235 5.221204 GCATTGGAAATTGATCTTCCTCTCC 60.221 44.000 12.13 3.79 42.52 3.71
3252 3341 1.624312 TGCCATTGCACAAATCCACAT 59.376 42.857 0.00 0.00 44.23 3.21
3535 3627 2.610519 CCCCTCCTTCCTGCAGCTT 61.611 63.158 8.66 0.00 0.00 3.74
3545 3637 1.002430 TCCTGCAGCTTGACGAAATCT 59.998 47.619 8.66 0.00 0.00 2.40
3596 3688 2.272230 ATCTCTCTCTCCACCGCCGA 62.272 60.000 0.00 0.00 0.00 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 0.752054 CCACAACTTGCACCCAATGT 59.248 50.000 0.00 0.00 0.00 2.71
10 11 0.033781 CCCACAACTTGCACCCAATG 59.966 55.000 0.00 0.00 0.00 2.82
11 12 0.105760 TCCCACAACTTGCACCCAAT 60.106 50.000 0.00 0.00 0.00 3.16
12 13 1.040339 GTCCCACAACTTGCACCCAA 61.040 55.000 0.00 0.00 0.00 4.12
13 14 1.454847 GTCCCACAACTTGCACCCA 60.455 57.895 0.00 0.00 0.00 4.51
14 15 1.152756 AGTCCCACAACTTGCACCC 60.153 57.895 0.00 0.00 0.00 4.61
15 16 1.455383 CCAGTCCCACAACTTGCACC 61.455 60.000 0.00 0.00 0.00 5.01
16 17 1.455383 CCCAGTCCCACAACTTGCAC 61.455 60.000 0.00 0.00 0.00 4.57
17 18 1.152777 CCCAGTCCCACAACTTGCA 60.153 57.895 0.00 0.00 0.00 4.08
18 19 0.109723 TACCCAGTCCCACAACTTGC 59.890 55.000 0.00 0.00 0.00 4.01
19 20 1.271379 CCTACCCAGTCCCACAACTTG 60.271 57.143 0.00 0.00 0.00 3.16
20 21 1.064825 CCTACCCAGTCCCACAACTT 58.935 55.000 0.00 0.00 0.00 2.66
21 22 0.840722 CCCTACCCAGTCCCACAACT 60.841 60.000 0.00 0.00 0.00 3.16
22 23 1.131928 ACCCTACCCAGTCCCACAAC 61.132 60.000 0.00 0.00 0.00 3.32
23 24 0.838987 GACCCTACCCAGTCCCACAA 60.839 60.000 0.00 0.00 0.00 3.33
24 25 1.229400 GACCCTACCCAGTCCCACA 60.229 63.158 0.00 0.00 0.00 4.17
25 26 0.620700 ATGACCCTACCCAGTCCCAC 60.621 60.000 0.00 0.00 31.76 4.61
26 27 0.120377 AATGACCCTACCCAGTCCCA 59.880 55.000 0.00 0.00 31.76 4.37
27 28 1.296002 AAATGACCCTACCCAGTCCC 58.704 55.000 0.00 0.00 31.76 4.46
28 29 3.264964 TGTAAAATGACCCTACCCAGTCC 59.735 47.826 0.00 0.00 31.76 3.85
29 30 4.563140 TGTAAAATGACCCTACCCAGTC 57.437 45.455 0.00 0.00 0.00 3.51
30 31 4.352893 ACTTGTAAAATGACCCTACCCAGT 59.647 41.667 0.00 0.00 0.00 4.00
31 32 4.918588 ACTTGTAAAATGACCCTACCCAG 58.081 43.478 0.00 0.00 0.00 4.45
32 33 5.074115 CAACTTGTAAAATGACCCTACCCA 58.926 41.667 0.00 0.00 0.00 4.51
33 34 5.074804 ACAACTTGTAAAATGACCCTACCC 58.925 41.667 0.00 0.00 0.00 3.69
34 35 6.373495 CCTACAACTTGTAAAATGACCCTACC 59.627 42.308 3.26 0.00 31.67 3.18
35 36 7.118825 GTCCTACAACTTGTAAAATGACCCTAC 59.881 40.741 3.26 0.00 31.67 3.18
36 37 7.163441 GTCCTACAACTTGTAAAATGACCCTA 58.837 38.462 3.26 0.00 31.67 3.53
37 38 6.002082 GTCCTACAACTTGTAAAATGACCCT 58.998 40.000 3.26 0.00 31.67 4.34
38 39 5.182570 GGTCCTACAACTTGTAAAATGACCC 59.817 44.000 18.30 8.84 34.62 4.46
39 40 5.766174 TGGTCCTACAACTTGTAAAATGACC 59.234 40.000 20.23 20.23 37.58 4.02
40 41 6.870971 TGGTCCTACAACTTGTAAAATGAC 57.129 37.500 3.26 7.29 31.67 3.06
41 42 7.201839 GGTTTGGTCCTACAACTTGTAAAATGA 60.202 37.037 3.26 0.00 31.67 2.57
42 43 6.921307 GGTTTGGTCCTACAACTTGTAAAATG 59.079 38.462 3.26 0.00 31.67 2.32
43 44 6.608002 TGGTTTGGTCCTACAACTTGTAAAAT 59.392 34.615 3.26 0.00 31.67 1.82
44 45 5.950549 TGGTTTGGTCCTACAACTTGTAAAA 59.049 36.000 3.26 0.00 31.67 1.52
45 46 5.507637 TGGTTTGGTCCTACAACTTGTAAA 58.492 37.500 3.26 0.00 31.67 2.01
46 47 5.113446 TGGTTTGGTCCTACAACTTGTAA 57.887 39.130 3.26 0.00 31.67 2.41
47 48 4.774660 TGGTTTGGTCCTACAACTTGTA 57.225 40.909 1.67 1.67 0.00 2.41
48 49 3.655615 TGGTTTGGTCCTACAACTTGT 57.344 42.857 0.00 0.00 0.00 3.16
49 50 4.023193 GTGATGGTTTGGTCCTACAACTTG 60.023 45.833 0.00 0.00 0.00 3.16
50 51 4.142038 GTGATGGTTTGGTCCTACAACTT 58.858 43.478 0.00 0.00 0.00 2.66
51 52 3.137544 TGTGATGGTTTGGTCCTACAACT 59.862 43.478 0.00 0.00 0.00 3.16
52 53 3.482436 TGTGATGGTTTGGTCCTACAAC 58.518 45.455 0.00 0.00 0.00 3.32
53 54 3.866703 TGTGATGGTTTGGTCCTACAA 57.133 42.857 0.00 0.00 0.00 2.41
54 55 4.078537 CAATGTGATGGTTTGGTCCTACA 58.921 43.478 0.00 0.00 0.00 2.74
55 56 4.079253 ACAATGTGATGGTTTGGTCCTAC 58.921 43.478 0.00 0.00 0.00 3.18
56 57 4.078537 CACAATGTGATGGTTTGGTCCTA 58.921 43.478 7.78 0.00 35.23 2.94
57 58 2.892852 CACAATGTGATGGTTTGGTCCT 59.107 45.455 7.78 0.00 35.23 3.85
58 59 2.890311 TCACAATGTGATGGTTTGGTCC 59.110 45.455 12.63 0.00 37.67 4.46
59 60 3.612479 GCTCACAATGTGATGGTTTGGTC 60.612 47.826 17.10 0.00 41.94 4.02
60 61 2.297033 GCTCACAATGTGATGGTTTGGT 59.703 45.455 17.10 0.00 41.94 3.67
61 62 2.296752 TGCTCACAATGTGATGGTTTGG 59.703 45.455 17.10 4.42 41.94 3.28
62 63 3.646611 TGCTCACAATGTGATGGTTTG 57.353 42.857 17.10 5.16 41.94 2.93
63 64 3.638160 ACTTGCTCACAATGTGATGGTTT 59.362 39.130 17.10 0.00 41.94 3.27
64 65 3.225104 ACTTGCTCACAATGTGATGGTT 58.775 40.909 17.10 0.00 41.94 3.67
65 66 2.867624 ACTTGCTCACAATGTGATGGT 58.132 42.857 17.10 10.03 41.94 3.55
66 67 3.928727 AACTTGCTCACAATGTGATGG 57.071 42.857 17.10 7.38 41.94 3.51
67 68 5.860182 CCTAAAACTTGCTCACAATGTGATG 59.140 40.000 17.10 11.72 41.94 3.07
68 69 5.769662 TCCTAAAACTTGCTCACAATGTGAT 59.230 36.000 17.10 1.82 41.94 3.06
69 70 5.008613 GTCCTAAAACTTGCTCACAATGTGA 59.991 40.000 15.88 15.88 40.50 3.58
70 71 5.215160 GTCCTAAAACTTGCTCACAATGTG 58.785 41.667 7.12 7.12 34.61 3.21
71 72 4.278419 GGTCCTAAAACTTGCTCACAATGT 59.722 41.667 0.00 0.00 34.61 2.71
72 73 4.321230 GGGTCCTAAAACTTGCTCACAATG 60.321 45.833 0.00 0.00 34.61 2.82
73 74 3.826729 GGGTCCTAAAACTTGCTCACAAT 59.173 43.478 0.00 0.00 34.61 2.71
74 75 3.219281 GGGTCCTAAAACTTGCTCACAA 58.781 45.455 0.00 0.00 0.00 3.33
75 76 2.488347 GGGGTCCTAAAACTTGCTCACA 60.488 50.000 0.00 0.00 0.00 3.58
76 77 2.160205 GGGGTCCTAAAACTTGCTCAC 58.840 52.381 0.00 0.00 0.00 3.51
77 78 1.074889 GGGGGTCCTAAAACTTGCTCA 59.925 52.381 0.00 0.00 0.00 4.26
78 79 1.835494 GGGGGTCCTAAAACTTGCTC 58.165 55.000 0.00 0.00 0.00 4.26
79 80 0.037734 CGGGGGTCCTAAAACTTGCT 59.962 55.000 0.00 0.00 0.00 3.91
80 81 0.963856 CCGGGGGTCCTAAAACTTGC 60.964 60.000 0.00 0.00 0.00 4.01
81 82 0.402887 ACCGGGGGTCCTAAAACTTG 59.597 55.000 6.32 0.00 0.00 3.16
82 83 0.402887 CACCGGGGGTCCTAAAACTT 59.597 55.000 6.32 0.00 31.02 2.66
83 84 2.072366 CACCGGGGGTCCTAAAACT 58.928 57.895 6.32 0.00 31.02 2.66
84 85 1.676635 GCACCGGGGGTCCTAAAAC 60.677 63.158 5.47 0.00 31.02 2.43
85 86 1.428718 AAGCACCGGGGGTCCTAAAA 61.429 55.000 9.89 0.00 31.02 1.52
86 87 1.428718 AAAGCACCGGGGGTCCTAAA 61.429 55.000 9.89 0.00 31.02 1.85
87 88 1.428718 AAAAGCACCGGGGGTCCTAA 61.429 55.000 9.89 0.00 31.02 2.69
88 89 0.547229 TAAAAGCACCGGGGGTCCTA 60.547 55.000 9.89 0.00 31.02 2.94
89 90 1.428718 TTAAAAGCACCGGGGGTCCT 61.429 55.000 9.89 1.01 31.02 3.85
90 91 1.075305 TTAAAAGCACCGGGGGTCC 59.925 57.895 9.89 0.00 31.02 4.46
91 92 0.251033 AGTTAAAAGCACCGGGGGTC 60.251 55.000 9.89 0.00 31.02 4.46
92 93 0.251033 GAGTTAAAAGCACCGGGGGT 60.251 55.000 0.21 0.21 35.62 4.95
93 94 0.037734 AGAGTTAAAAGCACCGGGGG 59.962 55.000 5.47 0.00 0.00 5.40
94 95 2.773993 TAGAGTTAAAAGCACCGGGG 57.226 50.000 6.32 0.84 0.00 5.73
95 96 4.142469 CCAAATAGAGTTAAAAGCACCGGG 60.142 45.833 6.32 0.00 0.00 5.73
96 97 4.698304 TCCAAATAGAGTTAAAAGCACCGG 59.302 41.667 0.00 0.00 0.00 5.28
97 98 5.873179 TCCAAATAGAGTTAAAAGCACCG 57.127 39.130 0.00 0.00 0.00 4.94
98 99 8.957466 ACTATTCCAAATAGAGTTAAAAGCACC 58.043 33.333 12.43 0.00 0.00 5.01
107 108 8.482128 CCTCTCAGAACTATTCCAAATAGAGTT 58.518 37.037 12.43 1.60 33.14 3.01
108 109 7.841729 TCCTCTCAGAACTATTCCAAATAGAGT 59.158 37.037 12.43 1.84 0.00 3.24
109 110 8.243961 TCCTCTCAGAACTATTCCAAATAGAG 57.756 38.462 12.43 0.00 0.00 2.43
110 111 8.478877 GTTCCTCTCAGAACTATTCCAAATAGA 58.521 37.037 12.43 0.00 42.37 1.98
111 112 8.655651 GTTCCTCTCAGAACTATTCCAAATAG 57.344 38.462 5.39 5.39 42.37 1.73
123 124 2.694213 GCTTCCAGTTCCTCTCAGAAC 58.306 52.381 0.00 0.00 45.34 3.01
124 125 1.273606 CGCTTCCAGTTCCTCTCAGAA 59.726 52.381 0.00 0.00 0.00 3.02
125 126 0.891373 CGCTTCCAGTTCCTCTCAGA 59.109 55.000 0.00 0.00 0.00 3.27
126 127 0.605589 ACGCTTCCAGTTCCTCTCAG 59.394 55.000 0.00 0.00 0.00 3.35
127 128 1.048601 AACGCTTCCAGTTCCTCTCA 58.951 50.000 0.00 0.00 0.00 3.27
128 129 2.070028 GAAACGCTTCCAGTTCCTCTC 58.930 52.381 0.00 0.00 0.00 3.20
129 130 1.605712 CGAAACGCTTCCAGTTCCTCT 60.606 52.381 0.00 0.00 0.00 3.69
130 131 0.790814 CGAAACGCTTCCAGTTCCTC 59.209 55.000 0.00 0.00 0.00 3.71
131 132 0.391597 TCGAAACGCTTCCAGTTCCT 59.608 50.000 0.00 0.00 0.00 3.36
132 133 0.790814 CTCGAAACGCTTCCAGTTCC 59.209 55.000 0.00 0.00 0.00 3.62
133 134 0.790814 CCTCGAAACGCTTCCAGTTC 59.209 55.000 0.00 0.00 0.00 3.01
134 135 0.106149 ACCTCGAAACGCTTCCAGTT 59.894 50.000 0.00 0.00 0.00 3.16
135 136 0.319641 GACCTCGAAACGCTTCCAGT 60.320 55.000 0.00 0.00 0.00 4.00
136 137 0.319555 TGACCTCGAAACGCTTCCAG 60.320 55.000 0.00 0.00 0.00 3.86
137 138 0.599204 GTGACCTCGAAACGCTTCCA 60.599 55.000 0.00 0.00 0.00 3.53
138 139 1.289800 GGTGACCTCGAAACGCTTCC 61.290 60.000 0.00 0.00 0.00 3.46
139 140 1.615107 CGGTGACCTCGAAACGCTTC 61.615 60.000 0.00 0.00 0.00 3.86
140 141 1.663702 CGGTGACCTCGAAACGCTT 60.664 57.895 0.00 0.00 0.00 4.68
141 142 2.049433 CGGTGACCTCGAAACGCT 60.049 61.111 0.00 0.00 0.00 5.07
142 143 3.774702 GCGGTGACCTCGAAACGC 61.775 66.667 1.01 1.01 40.19 4.84
143 144 1.886861 CTTGCGGTGACCTCGAAACG 61.887 60.000 0.00 0.00 0.00 3.60
144 145 0.599204 TCTTGCGGTGACCTCGAAAC 60.599 55.000 0.00 0.00 0.00 2.78
145 146 0.319555 CTCTTGCGGTGACCTCGAAA 60.320 55.000 0.00 0.00 0.00 3.46
146 147 1.289066 CTCTTGCGGTGACCTCGAA 59.711 57.895 0.00 0.00 0.00 3.71
147 148 1.461091 AACTCTTGCGGTGACCTCGA 61.461 55.000 0.00 0.00 0.00 4.04
148 149 0.600255 AAACTCTTGCGGTGACCTCG 60.600 55.000 0.00 0.00 0.00 4.63
149 150 1.149148 GAAACTCTTGCGGTGACCTC 58.851 55.000 0.00 0.00 0.00 3.85
150 151 0.600255 CGAAACTCTTGCGGTGACCT 60.600 55.000 0.00 0.00 0.00 3.85
151 152 1.566018 CCGAAACTCTTGCGGTGACC 61.566 60.000 0.00 0.00 40.17 4.02
152 153 1.566018 CCCGAAACTCTTGCGGTGAC 61.566 60.000 0.00 0.00 43.35 3.67
153 154 1.301401 CCCGAAACTCTTGCGGTGA 60.301 57.895 0.00 0.00 43.35 4.02
154 155 2.325082 CCCCGAAACTCTTGCGGTG 61.325 63.158 0.00 0.00 43.35 4.94
155 156 2.032071 CCCCGAAACTCTTGCGGT 59.968 61.111 0.00 0.00 43.35 5.68
156 157 2.032071 ACCCCGAAACTCTTGCGG 59.968 61.111 0.00 0.00 44.42 5.69
157 158 0.245539 TAGACCCCGAAACTCTTGCG 59.754 55.000 0.00 0.00 0.00 4.85
158 159 2.093658 TGATAGACCCCGAAACTCTTGC 60.094 50.000 0.00 0.00 0.00 4.01
159 160 3.430929 CCTGATAGACCCCGAAACTCTTG 60.431 52.174 0.00 0.00 0.00 3.02
160 161 2.766828 CCTGATAGACCCCGAAACTCTT 59.233 50.000 0.00 0.00 0.00 2.85
161 162 2.389715 CCTGATAGACCCCGAAACTCT 58.610 52.381 0.00 0.00 0.00 3.24
162 163 1.202545 GCCTGATAGACCCCGAAACTC 60.203 57.143 0.00 0.00 0.00 3.01
163 164 0.831307 GCCTGATAGACCCCGAAACT 59.169 55.000 0.00 0.00 0.00 2.66
164 165 0.539986 TGCCTGATAGACCCCGAAAC 59.460 55.000 0.00 0.00 0.00 2.78
165 166 1.281419 TTGCCTGATAGACCCCGAAA 58.719 50.000 0.00 0.00 0.00 3.46
166 167 1.507140 ATTGCCTGATAGACCCCGAA 58.493 50.000 0.00 0.00 0.00 4.30
167 168 1.968493 GTATTGCCTGATAGACCCCGA 59.032 52.381 0.00 0.00 0.00 5.14
168 169 1.002087 GGTATTGCCTGATAGACCCCG 59.998 57.143 0.00 0.00 0.00 5.73
169 170 1.002087 CGGTATTGCCTGATAGACCCC 59.998 57.143 0.00 0.00 34.25 4.95
170 171 1.968493 TCGGTATTGCCTGATAGACCC 59.032 52.381 0.00 0.00 34.25 4.46
171 172 2.628657 ACTCGGTATTGCCTGATAGACC 59.371 50.000 0.00 0.00 34.25 3.85
172 173 5.646577 ATACTCGGTATTGCCTGATAGAC 57.353 43.478 0.00 0.00 34.25 2.59
173 174 6.295123 GGAAATACTCGGTATTGCCTGATAGA 60.295 42.308 19.19 0.00 45.90 1.98
174 175 5.869888 GGAAATACTCGGTATTGCCTGATAG 59.130 44.000 19.19 0.00 45.90 2.08
175 176 5.790593 GGAAATACTCGGTATTGCCTGATA 58.209 41.667 19.19 0.00 45.90 2.15
176 177 4.642429 GGAAATACTCGGTATTGCCTGAT 58.358 43.478 19.19 2.91 45.90 2.90
177 178 4.067972 GGAAATACTCGGTATTGCCTGA 57.932 45.455 19.19 0.00 45.90 3.86
227 228 4.502415 TCTAGGGCATATTTCCATCAGGA 58.498 43.478 0.00 0.00 43.93 3.86
228 229 4.324099 CCTCTAGGGCATATTTCCATCAGG 60.324 50.000 0.00 0.00 0.00 3.86
229 230 4.841422 CCTCTAGGGCATATTTCCATCAG 58.159 47.826 0.00 0.00 0.00 2.90
230 231 4.916041 CCTCTAGGGCATATTTCCATCA 57.084 45.455 0.00 0.00 0.00 3.07
243 244 6.647067 CGAGAACTTTATTATTGCCTCTAGGG 59.353 42.308 0.00 0.00 35.18 3.53
244 245 6.647067 CCGAGAACTTTATTATTGCCTCTAGG 59.353 42.308 0.00 0.00 38.53 3.02
245 246 6.647067 CCCGAGAACTTTATTATTGCCTCTAG 59.353 42.308 0.00 0.00 0.00 2.43
246 247 6.463897 CCCCGAGAACTTTATTATTGCCTCTA 60.464 42.308 0.00 0.00 0.00 2.43
247 248 5.368989 CCCGAGAACTTTATTATTGCCTCT 58.631 41.667 0.00 0.00 0.00 3.69
248 249 4.515567 CCCCGAGAACTTTATTATTGCCTC 59.484 45.833 0.00 0.00 0.00 4.70
249 250 4.461198 CCCCGAGAACTTTATTATTGCCT 58.539 43.478 0.00 0.00 0.00 4.75
250 251 3.568430 CCCCCGAGAACTTTATTATTGCC 59.432 47.826 0.00 0.00 0.00 4.52
251 252 4.830826 CCCCCGAGAACTTTATTATTGC 57.169 45.455 0.00 0.00 0.00 3.56
290 291 3.110178 GTCGTTCGCCGTCTTGGG 61.110 66.667 0.00 0.00 38.63 4.12
291 292 3.467119 CGTCGTTCGCCGTCTTGG 61.467 66.667 0.00 0.00 42.50 3.61
300 301 2.079941 TGTTTTTGAAGCGTCGTTCG 57.920 45.000 0.00 0.00 43.12 3.95
301 302 2.645647 CGATGTTTTTGAAGCGTCGTTC 59.354 45.455 9.88 0.00 43.33 3.95
302 303 2.601266 CCGATGTTTTTGAAGCGTCGTT 60.601 45.455 14.78 0.00 45.73 3.85
303 304 1.070175 CCGATGTTTTTGAAGCGTCGT 60.070 47.619 14.78 0.00 45.73 4.34
304 305 1.591248 CCGATGTTTTTGAAGCGTCG 58.409 50.000 10.78 10.78 46.42 5.12
305 306 1.401018 CCCCGATGTTTTTGAAGCGTC 60.401 52.381 0.00 0.00 0.00 5.19
306 307 0.596082 CCCCGATGTTTTTGAAGCGT 59.404 50.000 0.00 0.00 0.00 5.07
307 308 0.732538 GCCCCGATGTTTTTGAAGCG 60.733 55.000 0.00 0.00 0.00 4.68
308 309 0.389817 GGCCCCGATGTTTTTGAAGC 60.390 55.000 0.00 0.00 0.00 3.86
309 310 0.965439 TGGCCCCGATGTTTTTGAAG 59.035 50.000 0.00 0.00 0.00 3.02
310 311 0.965439 CTGGCCCCGATGTTTTTGAA 59.035 50.000 0.00 0.00 0.00 2.69
311 312 1.531739 GCTGGCCCCGATGTTTTTGA 61.532 55.000 0.00 0.00 0.00 2.69
312 313 1.079888 GCTGGCCCCGATGTTTTTG 60.080 57.895 0.00 0.00 0.00 2.44
313 314 1.118356 TTGCTGGCCCCGATGTTTTT 61.118 50.000 0.00 0.00 0.00 1.94
314 315 1.532794 TTGCTGGCCCCGATGTTTT 60.533 52.632 0.00 0.00 0.00 2.43
315 316 2.117206 TTGCTGGCCCCGATGTTT 59.883 55.556 0.00 0.00 0.00 2.83
316 317 2.676471 GTTGCTGGCCCCGATGTT 60.676 61.111 0.00 0.00 0.00 2.71
326 327 2.361610 ATTGAGGGGCGTTGCTGG 60.362 61.111 0.00 0.00 0.00 4.85
327 328 2.409870 GGATTGAGGGGCGTTGCTG 61.410 63.158 0.00 0.00 0.00 4.41
328 329 2.044946 GGATTGAGGGGCGTTGCT 60.045 61.111 0.00 0.00 0.00 3.91
329 330 3.508840 CGGATTGAGGGGCGTTGC 61.509 66.667 0.00 0.00 0.00 4.17
330 331 2.608970 ATCCGGATTGAGGGGCGTTG 62.609 60.000 12.38 0.00 0.00 4.10
331 332 2.325393 GATCCGGATTGAGGGGCGTT 62.325 60.000 20.22 0.00 0.00 4.84
332 333 2.768344 ATCCGGATTGAGGGGCGT 60.768 61.111 12.38 0.00 0.00 5.68
333 334 2.031163 GATCCGGATTGAGGGGCG 59.969 66.667 20.22 0.00 0.00 6.13
334 335 2.031163 CGATCCGGATTGAGGGGC 59.969 66.667 25.38 6.41 0.00 5.80
335 336 1.668294 CTCGATCCGGATTGAGGGG 59.332 63.158 38.85 23.62 42.83 4.79
353 354 2.939261 TTCGGCCGAGTTGAGGGAC 61.939 63.158 29.20 0.00 0.00 4.46
354 355 2.602267 TTCGGCCGAGTTGAGGGA 60.602 61.111 29.20 8.04 0.00 4.20
355 356 2.434359 GTTCGGCCGAGTTGAGGG 60.434 66.667 29.20 0.00 0.00 4.30
356 357 1.446272 GAGTTCGGCCGAGTTGAGG 60.446 63.158 29.20 0.00 0.00 3.86
357 358 1.009389 GTGAGTTCGGCCGAGTTGAG 61.009 60.000 29.20 0.00 0.00 3.02
358 359 1.006571 GTGAGTTCGGCCGAGTTGA 60.007 57.895 29.20 11.12 0.00 3.18
359 360 2.027625 GGTGAGTTCGGCCGAGTTG 61.028 63.158 29.20 0.00 0.00 3.16
360 361 1.827399 ATGGTGAGTTCGGCCGAGTT 61.827 55.000 29.20 20.30 0.00 3.01
361 362 2.227089 GATGGTGAGTTCGGCCGAGT 62.227 60.000 29.20 20.01 0.00 4.18
362 363 1.519455 GATGGTGAGTTCGGCCGAG 60.519 63.158 29.20 0.00 0.00 4.63
363 364 2.577059 GATGGTGAGTTCGGCCGA 59.423 61.111 27.28 27.28 0.00 5.54
364 365 2.511600 GGATGGTGAGTTCGGCCG 60.512 66.667 22.12 22.12 0.00 6.13
365 366 2.124695 GGGATGGTGAGTTCGGCC 60.125 66.667 0.00 0.00 0.00 6.13
366 367 2.511600 CGGGATGGTGAGTTCGGC 60.512 66.667 0.00 0.00 0.00 5.54
367 368 2.186903 CCGGGATGGTGAGTTCGG 59.813 66.667 0.00 0.00 0.00 4.30
368 369 2.511600 GCCGGGATGGTGAGTTCG 60.512 66.667 2.18 0.00 41.21 3.95
369 370 2.124695 GGCCGGGATGGTGAGTTC 60.125 66.667 2.18 0.00 41.21 3.01
370 371 4.096003 CGGCCGGGATGGTGAGTT 62.096 66.667 20.10 0.00 41.21 3.01
394 395 4.749310 AGCAGCCGAACAGAGCCG 62.749 66.667 0.00 0.00 0.00 5.52
395 396 2.817396 GAGCAGCCGAACAGAGCC 60.817 66.667 0.00 0.00 0.00 4.70
396 397 2.817396 GGAGCAGCCGAACAGAGC 60.817 66.667 0.00 0.00 0.00 4.09
397 398 1.447489 CTGGAGCAGCCGAACAGAG 60.447 63.158 0.00 0.00 40.66 3.35
398 399 2.659016 CTGGAGCAGCCGAACAGA 59.341 61.111 0.00 0.00 40.66 3.41
410 411 3.554342 ATAGCAGGCCGGCTGGAG 61.554 66.667 36.67 14.62 45.44 3.86
411 412 3.865383 CATAGCAGGCCGGCTGGA 61.865 66.667 36.67 21.03 45.44 3.86
416 417 2.969238 CTTCGCATAGCAGGCCGG 60.969 66.667 0.00 0.00 0.00 6.13
417 418 2.202932 ACTTCGCATAGCAGGCCG 60.203 61.111 0.00 0.00 0.00 6.13
418 419 0.744414 TTGACTTCGCATAGCAGGCC 60.744 55.000 0.00 0.00 0.00 5.19
419 420 0.375106 GTTGACTTCGCATAGCAGGC 59.625 55.000 0.00 0.00 0.00 4.85
420 421 2.015736 AGTTGACTTCGCATAGCAGG 57.984 50.000 0.00 0.00 0.00 4.85
421 422 2.531912 CGTAGTTGACTTCGCATAGCAG 59.468 50.000 0.00 0.00 30.58 4.24
422 423 2.526077 CGTAGTTGACTTCGCATAGCA 58.474 47.619 0.00 0.00 30.58 3.49
423 424 1.852895 CCGTAGTTGACTTCGCATAGC 59.147 52.381 4.87 0.00 35.79 2.97
424 425 1.852895 GCCGTAGTTGACTTCGCATAG 59.147 52.381 4.87 0.00 35.79 2.23
425 426 1.796253 CGCCGTAGTTGACTTCGCATA 60.796 52.381 4.87 0.00 35.79 3.14
426 427 1.076533 CGCCGTAGTTGACTTCGCAT 61.077 55.000 4.87 0.00 35.79 4.73
427 428 1.731613 CGCCGTAGTTGACTTCGCA 60.732 57.895 4.87 0.00 35.79 5.10
428 429 1.671880 GACGCCGTAGTTGACTTCGC 61.672 60.000 0.00 1.13 35.79 4.70
429 430 0.109873 AGACGCCGTAGTTGACTTCG 60.110 55.000 0.00 3.57 36.67 3.79
430 431 1.068748 TGAGACGCCGTAGTTGACTTC 60.069 52.381 0.00 0.00 0.00 3.01
431 432 0.956633 TGAGACGCCGTAGTTGACTT 59.043 50.000 0.00 0.00 0.00 3.01
432 433 1.132643 GATGAGACGCCGTAGTTGACT 59.867 52.381 0.00 0.00 0.00 3.41
433 434 1.132643 AGATGAGACGCCGTAGTTGAC 59.867 52.381 0.00 0.00 0.00 3.18
434 435 1.132453 CAGATGAGACGCCGTAGTTGA 59.868 52.381 0.00 0.00 0.00 3.18
435 436 1.132453 TCAGATGAGACGCCGTAGTTG 59.868 52.381 0.00 0.00 0.00 3.16
436 437 1.132643 GTCAGATGAGACGCCGTAGTT 59.867 52.381 0.00 0.00 0.00 2.24
437 438 0.733729 GTCAGATGAGACGCCGTAGT 59.266 55.000 0.00 0.00 0.00 2.73
438 439 0.733150 TGTCAGATGAGACGCCGTAG 59.267 55.000 0.00 0.00 41.41 3.51
439 440 0.450583 GTGTCAGATGAGACGCCGTA 59.549 55.000 0.00 0.00 41.85 4.02
440 441 1.213013 GTGTCAGATGAGACGCCGT 59.787 57.895 0.00 0.00 41.85 5.68
441 442 4.079090 GTGTCAGATGAGACGCCG 57.921 61.111 0.00 0.00 41.85 6.46
445 446 1.729472 CGGTGTCGTGTCAGATGAGAC 60.729 57.143 0.20 0.20 38.99 3.36
446 447 0.521735 CGGTGTCGTGTCAGATGAGA 59.478 55.000 0.00 0.00 0.00 3.27
447 448 0.521735 TCGGTGTCGTGTCAGATGAG 59.478 55.000 0.00 0.00 37.69 2.90
448 449 0.240145 GTCGGTGTCGTGTCAGATGA 59.760 55.000 0.00 0.00 37.69 2.92
449 450 0.039527 TGTCGGTGTCGTGTCAGATG 60.040 55.000 0.00 0.00 37.69 2.90
450 451 0.671796 TTGTCGGTGTCGTGTCAGAT 59.328 50.000 0.00 0.00 37.69 2.90
451 452 0.030235 CTTGTCGGTGTCGTGTCAGA 59.970 55.000 0.00 0.00 37.69 3.27
452 453 0.030235 TCTTGTCGGTGTCGTGTCAG 59.970 55.000 0.00 0.00 37.69 3.51
453 454 0.248743 GTCTTGTCGGTGTCGTGTCA 60.249 55.000 0.00 0.00 37.69 3.58
454 455 1.266786 CGTCTTGTCGGTGTCGTGTC 61.267 60.000 0.00 0.00 37.69 3.67
455 456 1.298863 CGTCTTGTCGGTGTCGTGT 60.299 57.895 0.00 0.00 37.69 4.49
456 457 2.014554 CCGTCTTGTCGGTGTCGTG 61.015 63.158 0.00 0.00 44.77 4.35
457 458 2.333938 CCGTCTTGTCGGTGTCGT 59.666 61.111 0.00 0.00 44.77 4.34
464 465 4.104143 GGTATGGCCGTCTTGTCG 57.896 61.111 0.00 0.00 0.00 4.35
473 474 4.157120 AGTGGTCGCGGTATGGCC 62.157 66.667 6.13 0.00 0.00 5.36
474 475 2.890474 CAGTGGTCGCGGTATGGC 60.890 66.667 6.13 0.00 0.00 4.40
475 476 1.079405 AACAGTGGTCGCGGTATGG 60.079 57.895 6.13 0.00 0.00 2.74
476 477 1.966493 GCAACAGTGGTCGCGGTATG 61.966 60.000 6.13 0.96 0.00 2.39
477 478 1.740296 GCAACAGTGGTCGCGGTAT 60.740 57.895 6.13 0.00 0.00 2.73
478 479 2.356553 GCAACAGTGGTCGCGGTA 60.357 61.111 6.13 0.00 0.00 4.02
479 480 4.235762 AGCAACAGTGGTCGCGGT 62.236 61.111 6.13 0.00 0.00 5.68
480 481 3.716006 CAGCAACAGTGGTCGCGG 61.716 66.667 6.13 0.00 31.53 6.46
481 482 0.735978 TATCAGCAACAGTGGTCGCG 60.736 55.000 0.00 0.00 31.53 5.87
482 483 1.438651 TTATCAGCAACAGTGGTCGC 58.561 50.000 0.00 0.00 31.53 5.19
483 484 3.729526 CTTTATCAGCAACAGTGGTCG 57.270 47.619 0.00 0.00 31.53 4.79
495 496 4.568359 AGCGAACAGTGTATGCTTTATCAG 59.432 41.667 14.56 0.00 30.27 2.90
496 497 4.503910 AGCGAACAGTGTATGCTTTATCA 58.496 39.130 14.56 0.00 30.27 2.15
497 498 4.317418 CGAGCGAACAGTGTATGCTTTATC 60.317 45.833 19.61 9.15 35.73 1.75
498 499 3.551890 CGAGCGAACAGTGTATGCTTTAT 59.448 43.478 19.61 2.12 35.73 1.40
499 500 2.921121 CGAGCGAACAGTGTATGCTTTA 59.079 45.455 19.61 0.00 35.73 1.85
500 501 1.726791 CGAGCGAACAGTGTATGCTTT 59.273 47.619 19.61 3.06 35.73 3.51
501 502 1.336887 ACGAGCGAACAGTGTATGCTT 60.337 47.619 19.61 5.98 35.73 3.91
502 503 0.243907 ACGAGCGAACAGTGTATGCT 59.756 50.000 18.93 18.93 38.89 3.79
503 504 0.640768 GACGAGCGAACAGTGTATGC 59.359 55.000 10.77 10.77 0.00 3.14
504 505 1.649171 GTGACGAGCGAACAGTGTATG 59.351 52.381 0.00 0.00 0.00 2.39
505 506 1.268625 TGTGACGAGCGAACAGTGTAT 59.731 47.619 0.00 0.00 0.00 2.29
506 507 0.664224 TGTGACGAGCGAACAGTGTA 59.336 50.000 0.00 0.00 0.00 2.90
507 508 0.870307 GTGTGACGAGCGAACAGTGT 60.870 55.000 0.00 0.00 0.00 3.55
508 509 1.846648 GTGTGACGAGCGAACAGTG 59.153 57.895 0.00 0.00 0.00 3.66
509 510 1.657487 CGTGTGACGAGCGAACAGT 60.657 57.895 0.00 0.00 46.05 3.55
510 511 2.988549 GCGTGTGACGAGCGAACAG 61.989 63.158 0.00 0.00 46.05 3.16
511 512 3.028019 GCGTGTGACGAGCGAACA 61.028 61.111 0.00 0.00 46.05 3.18
517 518 3.545481 GATGCCGCGTGTGACGAG 61.545 66.667 4.92 0.00 46.05 4.18
518 519 3.641159 ATGATGCCGCGTGTGACGA 62.641 57.895 4.92 0.00 46.05 4.20
519 520 3.142867 GATGATGCCGCGTGTGACG 62.143 63.158 4.92 0.00 45.88 4.35
520 521 0.527600 TAGATGATGCCGCGTGTGAC 60.528 55.000 4.92 0.00 0.00 3.67
521 522 0.527600 GTAGATGATGCCGCGTGTGA 60.528 55.000 4.92 0.00 0.00 3.58
522 523 0.805711 TGTAGATGATGCCGCGTGTG 60.806 55.000 4.92 0.00 0.00 3.82
523 524 0.108377 TTGTAGATGATGCCGCGTGT 60.108 50.000 4.92 0.00 0.00 4.49
524 525 1.070376 CATTGTAGATGATGCCGCGTG 60.070 52.381 4.92 0.00 0.00 5.34
525 526 1.220529 CATTGTAGATGATGCCGCGT 58.779 50.000 4.92 0.00 0.00 6.01
526 527 1.220529 ACATTGTAGATGATGCCGCG 58.779 50.000 0.00 0.00 0.00 6.46
527 528 3.393800 AGTACATTGTAGATGATGCCGC 58.606 45.455 0.00 0.00 0.00 6.53
528 529 5.294306 ACAAAGTACATTGTAGATGATGCCG 59.706 40.000 14.47 0.00 41.56 5.69
529 530 6.238484 GGACAAAGTACATTGTAGATGATGCC 60.238 42.308 15.89 7.26 43.31 4.40
530 531 6.238484 GGGACAAAGTACATTGTAGATGATGC 60.238 42.308 15.89 2.12 43.31 3.91
531 532 6.260936 GGGGACAAAGTACATTGTAGATGATG 59.739 42.308 15.89 0.00 43.31 3.07
532 533 6.158695 AGGGGACAAAGTACATTGTAGATGAT 59.841 38.462 15.89 0.00 43.31 2.45
533 534 5.487488 AGGGGACAAAGTACATTGTAGATGA 59.513 40.000 15.89 0.00 43.31 2.92
534 535 5.745227 AGGGGACAAAGTACATTGTAGATG 58.255 41.667 15.89 0.02 43.31 2.90
535 536 6.180472 CAAGGGGACAAAGTACATTGTAGAT 58.820 40.000 15.89 1.36 43.31 1.98
536 537 5.514136 CCAAGGGGACAAAGTACATTGTAGA 60.514 44.000 15.89 0.00 43.31 2.59
537 538 4.700213 CCAAGGGGACAAAGTACATTGTAG 59.300 45.833 15.89 3.58 43.31 2.74
538 539 4.658063 CCAAGGGGACAAAGTACATTGTA 58.342 43.478 15.89 0.00 43.31 2.41
539 540 3.496331 CCAAGGGGACAAAGTACATTGT 58.504 45.455 15.86 15.86 45.82 2.71
540 541 2.231235 GCCAAGGGGACAAAGTACATTG 59.769 50.000 9.21 9.21 35.59 2.82
541 542 2.158385 TGCCAAGGGGACAAAGTACATT 60.158 45.455 0.00 0.00 35.59 2.71
542 543 1.427368 TGCCAAGGGGACAAAGTACAT 59.573 47.619 0.00 0.00 35.59 2.29
543 544 0.847373 TGCCAAGGGGACAAAGTACA 59.153 50.000 0.00 0.00 35.59 2.90
544 545 1.073284 TCTGCCAAGGGGACAAAGTAC 59.927 52.381 0.00 0.00 35.59 2.73
545 546 1.073284 GTCTGCCAAGGGGACAAAGTA 59.927 52.381 0.00 0.00 35.59 2.24
546 547 0.178990 GTCTGCCAAGGGGACAAAGT 60.179 55.000 0.00 0.00 35.59 2.66
547 548 0.895559 GGTCTGCCAAGGGGACAAAG 60.896 60.000 0.00 0.00 35.59 2.77
548 549 1.152830 GGTCTGCCAAGGGGACAAA 59.847 57.895 0.00 0.00 35.59 2.83
549 550 2.840753 GGGTCTGCCAAGGGGACAA 61.841 63.158 0.00 0.00 35.59 3.18
550 551 3.256960 GGGTCTGCCAAGGGGACA 61.257 66.667 0.00 0.00 35.59 4.02
551 552 3.256960 TGGGTCTGCCAAGGGGAC 61.257 66.667 0.00 0.00 35.59 4.46
552 553 2.935481 CTGGGTCTGCCAAGGGGA 60.935 66.667 0.00 0.00 35.59 4.81
556 557 2.045536 GCTCCTGGGTCTGCCAAG 60.046 66.667 0.00 0.00 35.49 3.61
557 558 1.792757 ATTGCTCCTGGGTCTGCCAA 61.793 55.000 0.00 0.00 36.17 4.52
558 559 0.913934 TATTGCTCCTGGGTCTGCCA 60.914 55.000 0.00 0.00 36.17 4.92
559 560 0.464554 GTATTGCTCCTGGGTCTGCC 60.465 60.000 0.00 0.00 0.00 4.85
560 561 0.464554 GGTATTGCTCCTGGGTCTGC 60.465 60.000 0.00 0.00 0.00 4.26
561 562 1.207791 AGGTATTGCTCCTGGGTCTG 58.792 55.000 0.00 0.00 33.62 3.51
562 563 2.683768 CTAGGTATTGCTCCTGGGTCT 58.316 52.381 0.00 0.00 36.60 3.85
563 564 1.070914 GCTAGGTATTGCTCCTGGGTC 59.929 57.143 0.00 0.00 36.60 4.46
564 565 1.132500 GCTAGGTATTGCTCCTGGGT 58.868 55.000 0.00 0.00 36.60 4.51
565 566 0.398318 GGCTAGGTATTGCTCCTGGG 59.602 60.000 0.00 0.00 36.60 4.45
566 567 1.428869 AGGCTAGGTATTGCTCCTGG 58.571 55.000 0.00 0.00 36.60 4.45
567 568 2.028567 GCTAGGCTAGGTATTGCTCCTG 60.029 54.545 22.40 0.00 36.60 3.86
568 569 2.158234 AGCTAGGCTAGGTATTGCTCCT 60.158 50.000 23.84 5.65 36.99 3.69
569 570 2.252714 AGCTAGGCTAGGTATTGCTCC 58.747 52.381 23.84 3.35 36.99 4.70
570 571 4.707448 TGATAGCTAGGCTAGGTATTGCTC 59.293 45.833 34.44 26.24 46.26 4.26
571 572 4.678256 TGATAGCTAGGCTAGGTATTGCT 58.322 43.478 34.44 22.63 46.26 3.91
572 573 5.407407 TTGATAGCTAGGCTAGGTATTGC 57.593 43.478 34.44 26.13 46.26 3.56
573 574 5.047021 TGCTTGATAGCTAGGCTAGGTATTG 60.047 44.000 34.44 27.96 46.26 1.90
574 575 5.087323 TGCTTGATAGCTAGGCTAGGTATT 58.913 41.667 34.44 23.28 46.26 1.89
576 577 7.017778 GCTTGCTTGATAGCTAGGCTAGGTA 62.018 48.000 29.51 29.51 46.24 3.08
577 578 6.310910 GCTTGCTTGATAGCTAGGCTAGGT 62.311 50.000 27.36 27.36 46.24 3.08
578 579 3.864160 GCTTGCTTGATAGCTAGGCTAGG 60.864 52.174 22.40 5.59 46.24 3.02
579 580 3.244009 TGCTTGCTTGATAGCTAGGCTAG 60.244 47.826 17.33 17.33 46.24 3.42
580 581 2.700371 TGCTTGCTTGATAGCTAGGCTA 59.300 45.455 0.00 1.64 46.24 3.93
581 582 1.487976 TGCTTGCTTGATAGCTAGGCT 59.512 47.619 0.00 0.00 46.24 4.58
582 583 1.959042 TGCTTGCTTGATAGCTAGGC 58.041 50.000 0.00 1.95 46.24 3.93
583 584 3.683822 GCTATGCTTGCTTGATAGCTAGG 59.316 47.826 12.97 0.00 46.24 3.02
586 587 3.488778 AGCTATGCTTGCTTGATAGCT 57.511 42.857 15.60 15.60 46.52 3.32
604 605 9.440597 CTACAACGTGTAGCTTACATCACAAGC 62.441 44.444 10.73 0.00 43.11 4.01
605 606 4.447724 ACAACGTGTAGCTTACATCACAAG 59.552 41.667 0.00 0.00 41.34 3.16
606 607 4.373527 ACAACGTGTAGCTTACATCACAA 58.626 39.130 0.00 0.00 41.34 3.33
607 608 3.985008 ACAACGTGTAGCTTACATCACA 58.015 40.909 0.00 0.00 41.34 3.58
608 609 5.682049 CTACAACGTGTAGCTTACATCAC 57.318 43.478 10.73 0.00 43.11 3.06
619 620 3.510753 TGGGATGTAAGCTACAACGTGTA 59.489 43.478 0.00 0.00 42.76 2.90
620 621 2.300723 TGGGATGTAAGCTACAACGTGT 59.699 45.455 0.00 0.00 42.76 4.49
621 622 2.967362 TGGGATGTAAGCTACAACGTG 58.033 47.619 0.00 0.00 42.76 4.49
622 623 3.596214 CTTGGGATGTAAGCTACAACGT 58.404 45.455 0.00 0.00 42.76 3.99
623 624 2.351726 GCTTGGGATGTAAGCTACAACG 59.648 50.000 0.00 0.00 45.34 4.10
631 632 1.812571 GGTGTGTGCTTGGGATGTAAG 59.187 52.381 0.00 0.00 0.00 2.34
632 633 1.546773 GGGTGTGTGCTTGGGATGTAA 60.547 52.381 0.00 0.00 0.00 2.41
633 634 0.037590 GGGTGTGTGCTTGGGATGTA 59.962 55.000 0.00 0.00 0.00 2.29
634 635 1.228552 GGGTGTGTGCTTGGGATGT 60.229 57.895 0.00 0.00 0.00 3.06
635 636 0.612732 ATGGGTGTGTGCTTGGGATG 60.613 55.000 0.00 0.00 0.00 3.51
636 637 0.612732 CATGGGTGTGTGCTTGGGAT 60.613 55.000 0.00 0.00 0.00 3.85
637 638 1.228521 CATGGGTGTGTGCTTGGGA 60.229 57.895 0.00 0.00 0.00 4.37
638 639 2.934570 GCATGGGTGTGTGCTTGGG 61.935 63.158 0.00 0.00 38.30 4.12
639 640 2.652530 GCATGGGTGTGTGCTTGG 59.347 61.111 0.00 0.00 38.30 3.61
640 641 2.652530 GGCATGGGTGTGTGCTTG 59.347 61.111 0.00 0.00 41.04 4.01
641 642 2.601367 GGGCATGGGTGTGTGCTT 60.601 61.111 0.00 0.00 41.04 3.91
642 643 3.900862 TGGGCATGGGTGTGTGCT 61.901 61.111 0.00 0.00 41.04 4.40
643 644 3.683937 GTGGGCATGGGTGTGTGC 61.684 66.667 0.00 0.00 40.55 4.57
644 645 2.135903 TAGGTGGGCATGGGTGTGTG 62.136 60.000 0.00 0.00 0.00 3.82
645 646 1.850289 TAGGTGGGCATGGGTGTGT 60.850 57.895 0.00 0.00 0.00 3.72
646 647 1.077501 CTAGGTGGGCATGGGTGTG 60.078 63.158 0.00 0.00 0.00 3.82
647 648 2.983879 GCTAGGTGGGCATGGGTGT 61.984 63.158 0.00 0.00 0.00 4.16
648 649 2.124151 GCTAGGTGGGCATGGGTG 60.124 66.667 0.00 0.00 0.00 4.61
649 650 1.509548 AAAGCTAGGTGGGCATGGGT 61.510 55.000 0.00 0.00 0.00 4.51
650 651 0.550914 TAAAGCTAGGTGGGCATGGG 59.449 55.000 0.00 0.00 0.00 4.00
651 652 1.477558 CCTAAAGCTAGGTGGGCATGG 60.478 57.143 0.00 0.00 40.10 3.66
652 653 1.972872 CCTAAAGCTAGGTGGGCATG 58.027 55.000 0.00 0.00 40.10 4.06
665 666 5.073311 TGTGAGCTAGCTTACACCTAAAG 57.927 43.478 31.92 0.00 37.58 1.85
672 673 5.010719 ACTTTGTAGTGTGAGCTAGCTTACA 59.989 40.000 31.92 31.92 39.68 2.41
673 674 5.471257 ACTTTGTAGTGTGAGCTAGCTTAC 58.529 41.667 27.87 27.87 31.99 2.34
674 675 5.243060 TGACTTTGTAGTGTGAGCTAGCTTA 59.757 40.000 20.42 12.72 33.84 3.09
675 676 4.039245 TGACTTTGTAGTGTGAGCTAGCTT 59.961 41.667 20.42 4.72 33.84 3.74
676 677 3.574396 TGACTTTGTAGTGTGAGCTAGCT 59.426 43.478 19.45 19.45 33.84 3.32
677 678 3.914312 TGACTTTGTAGTGTGAGCTAGC 58.086 45.455 6.62 6.62 33.84 3.42
678 679 5.289595 TGTTGACTTTGTAGTGTGAGCTAG 58.710 41.667 0.00 0.00 33.84 3.42
679 680 5.270893 TGTTGACTTTGTAGTGTGAGCTA 57.729 39.130 0.00 0.00 33.84 3.32
680 681 4.137116 TGTTGACTTTGTAGTGTGAGCT 57.863 40.909 0.00 0.00 33.84 4.09
681 682 4.083802 GGATGTTGACTTTGTAGTGTGAGC 60.084 45.833 0.00 0.00 33.84 4.26
682 683 5.056480 TGGATGTTGACTTTGTAGTGTGAG 58.944 41.667 0.00 0.00 33.84 3.51
683 684 5.029807 TGGATGTTGACTTTGTAGTGTGA 57.970 39.130 0.00 0.00 33.84 3.58
684 685 5.106555 GGATGGATGTTGACTTTGTAGTGTG 60.107 44.000 0.00 0.00 33.84 3.82
685 686 5.003804 GGATGGATGTTGACTTTGTAGTGT 58.996 41.667 0.00 0.00 33.84 3.55
686 687 5.003160 TGGATGGATGTTGACTTTGTAGTG 58.997 41.667 0.00 0.00 33.84 2.74
687 688 5.241403 TGGATGGATGTTGACTTTGTAGT 57.759 39.130 0.00 0.00 37.31 2.73
688 689 6.375174 TGAATGGATGGATGTTGACTTTGTAG 59.625 38.462 0.00 0.00 0.00 2.74
689 690 6.244654 TGAATGGATGGATGTTGACTTTGTA 58.755 36.000 0.00 0.00 0.00 2.41
690 691 5.078949 TGAATGGATGGATGTTGACTTTGT 58.921 37.500 0.00 0.00 0.00 2.83
691 692 5.648178 TGAATGGATGGATGTTGACTTTG 57.352 39.130 0.00 0.00 0.00 2.77
692 693 5.953548 TGATGAATGGATGGATGTTGACTTT 59.046 36.000 0.00 0.00 0.00 2.66
693 694 5.512298 TGATGAATGGATGGATGTTGACTT 58.488 37.500 0.00 0.00 0.00 3.01
694 695 5.120054 TGATGAATGGATGGATGTTGACT 57.880 39.130 0.00 0.00 0.00 3.41
695 696 5.533528 TCATGATGAATGGATGGATGTTGAC 59.466 40.000 0.00 0.00 36.86 3.18
696 697 5.697067 TCATGATGAATGGATGGATGTTGA 58.303 37.500 0.00 0.00 36.86 3.18
697 698 5.535030 ACTCATGATGAATGGATGGATGTTG 59.465 40.000 0.00 0.00 36.86 3.33
698 699 5.702266 ACTCATGATGAATGGATGGATGTT 58.298 37.500 0.00 0.00 36.86 2.71
699 700 5.320488 ACTCATGATGAATGGATGGATGT 57.680 39.130 0.00 0.00 36.86 3.06
700 701 7.754851 TTAACTCATGATGAATGGATGGATG 57.245 36.000 0.00 0.00 36.86 3.51
701 702 8.803235 CAATTAACTCATGATGAATGGATGGAT 58.197 33.333 0.00 0.00 36.86 3.41
702 703 7.255695 GCAATTAACTCATGATGAATGGATGGA 60.256 37.037 0.00 0.00 36.86 3.41
703 704 6.866770 GCAATTAACTCATGATGAATGGATGG 59.133 38.462 0.00 0.00 36.86 3.51
704 705 7.381408 GTGCAATTAACTCATGATGAATGGATG 59.619 37.037 0.00 0.00 36.86 3.51
705 706 7.068962 TGTGCAATTAACTCATGATGAATGGAT 59.931 33.333 0.00 0.00 36.86 3.41
706 707 6.377712 TGTGCAATTAACTCATGATGAATGGA 59.622 34.615 0.00 0.00 36.86 3.41
707 708 6.566141 TGTGCAATTAACTCATGATGAATGG 58.434 36.000 0.00 0.00 36.86 3.16
708 709 7.477494 TCTGTGCAATTAACTCATGATGAATG 58.523 34.615 0.00 0.00 37.66 2.67
709 710 7.634671 TCTGTGCAATTAACTCATGATGAAT 57.365 32.000 0.00 0.00 0.00 2.57
710 711 7.175467 ACTTCTGTGCAATTAACTCATGATGAA 59.825 33.333 0.00 0.00 0.00 2.57
711 712 6.656270 ACTTCTGTGCAATTAACTCATGATGA 59.344 34.615 0.00 0.00 0.00 2.92
712 713 6.849502 ACTTCTGTGCAATTAACTCATGATG 58.150 36.000 0.00 0.00 0.00 3.07
713 714 8.743085 ATACTTCTGTGCAATTAACTCATGAT 57.257 30.769 0.00 0.00 0.00 2.45
714 715 7.823799 TGATACTTCTGTGCAATTAACTCATGA 59.176 33.333 0.00 0.00 0.00 3.07
1110 1111 1.076923 GGGAGGCTAGACTGGTCGA 60.077 63.158 0.42 0.00 34.09 4.20
1185 1186 4.210724 TCCCAAATCTGTAACCCTAACG 57.789 45.455 0.00 0.00 0.00 3.18
1282 1283 5.339530 CCCTTGTAATCTGGATCTTCAAGGT 60.340 44.000 22.90 0.00 44.85 3.50
1777 1782 1.681780 GCCACAATTGCTACCTGCCTA 60.682 52.381 5.05 0.00 42.00 3.93
1848 1853 2.381911 ACCATTGCCCATAGCTTCAAG 58.618 47.619 0.00 0.00 44.23 3.02
1941 1946 1.999648 TGGCATCCAGCTTGTTCTTT 58.000 45.000 0.00 0.00 44.79 2.52
1989 1994 3.808466 TCCTGGAAGTTCATCATCTCG 57.192 47.619 5.01 0.00 0.00 4.04
1993 1998 6.159398 ACCTTATCTTCCTGGAAGTTCATCAT 59.841 38.462 30.15 19.57 40.24 2.45
2301 2306 3.245443 ACTCTAGCTTCTCTTGGGTGAGA 60.245 47.826 0.00 0.00 40.87 3.27
2911 3000 6.238731 GCAGCCAATCTAAATGCAATGTACTA 60.239 38.462 0.00 0.00 36.88 1.82
3252 3341 2.169561 TGCATCTTAATAGCACGGTGGA 59.830 45.455 10.60 0.00 32.55 4.02
3349 3440 2.305635 TGGATGCTATGGTGAGTGTTGT 59.694 45.455 0.00 0.00 0.00 3.32
3520 3612 1.018226 CGTCAAGCTGCAGGAAGGAG 61.018 60.000 17.12 0.00 38.96 3.69
3535 3627 1.218047 CCGCTCCCAGATTTCGTCA 59.782 57.895 0.00 0.00 0.00 4.35
3596 3688 4.115199 GGAGGCGCTGAATGGGGT 62.115 66.667 7.64 0.00 0.00 4.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.