Multiple sequence alignment - TraesCS2D01G391600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G391600 chr2D 100.000 5793 0 0 1 5793 498773289 498767497 0.000000e+00 10698.0
1 TraesCS2D01G391600 chr2D 97.321 112 2 1 5419 5530 498767804 498767694 7.660000e-44 189.0
2 TraesCS2D01G391600 chr2D 97.321 112 2 1 5486 5596 498767871 498767760 7.660000e-44 189.0
3 TraesCS2D01G391600 chr2D 93.478 46 2 1 5419 5464 498767738 498767694 3.750000e-07 67.6
4 TraesCS2D01G391600 chr2D 93.478 46 2 1 5552 5596 498767871 498767826 3.750000e-07 67.6
5 TraesCS2D01G391600 chr2B 92.802 3001 147 24 2514 5483 585894045 585891083 0.000000e+00 4281.0
6 TraesCS2D01G391600 chr2B 94.598 1740 62 19 759 2481 585895923 585894199 0.000000e+00 2663.0
7 TraesCS2D01G391600 chr2B 95.575 226 4 2 4636 4861 768578014 768578233 1.990000e-94 357.0
8 TraesCS2D01G391600 chr2A 91.998 1787 78 20 712 2481 643444384 643442646 0.000000e+00 2447.0
9 TraesCS2D01G391600 chr2A 91.209 1729 80 26 2514 4236 643442492 643440830 0.000000e+00 2285.0
10 TraesCS2D01G391600 chr2A 95.764 897 26 4 4233 5126 643440750 643439863 0.000000e+00 1435.0
11 TraesCS2D01G391600 chr2A 90.305 361 30 4 5125 5483 643439737 643439380 8.790000e-128 468.0
12 TraesCS2D01G391600 chr2A 96.970 33 1 0 4922 4954 643439862 643439830 8.110000e-04 56.5
13 TraesCS2D01G391600 chr5A 90.385 1040 63 9 1699 2725 591602517 591603532 0.000000e+00 1332.0
14 TraesCS2D01G391600 chr5A 90.019 1032 65 10 1707 2725 296660149 296661155 0.000000e+00 1301.0
15 TraesCS2D01G391600 chr5A 87.811 763 79 9 1 752 382302526 382303285 0.000000e+00 881.0
16 TraesCS2D01G391600 chr5A 74.643 280 51 16 1503 1767 653717133 653716859 7.940000e-19 106.0
17 TraesCS2D01G391600 chr7D 89.050 758 72 6 1 748 170285150 170285906 0.000000e+00 929.0
18 TraesCS2D01G391600 chr7D 88.699 761 77 4 1 752 521714421 521713661 0.000000e+00 920.0
19 TraesCS2D01G391600 chr5D 88.654 758 74 7 1 748 480852436 480853191 0.000000e+00 913.0
20 TraesCS2D01G391600 chr5D 94.403 268 14 1 4021 4287 412253279 412253012 1.500000e-110 411.0
21 TraesCS2D01G391600 chr5D 95.536 224 4 2 4636 4859 533542567 533542784 2.570000e-93 353.0
22 TraesCS2D01G391600 chr5D 76.157 281 45 18 1503 1767 526572118 526571844 1.690000e-25 128.0
23 TraesCS2D01G391600 chr6D 88.289 760 81 5 1 752 97810452 97811211 0.000000e+00 904.0
24 TraesCS2D01G391600 chr3B 90.462 692 57 4 1 684 828542184 828541494 0.000000e+00 904.0
25 TraesCS2D01G391600 chr3B 86.905 84 9 2 1661 1743 228690629 228690547 6.180000e-15 93.5
26 TraesCS2D01G391600 chr3D 88.228 756 77 7 1 747 310695045 310694293 0.000000e+00 893.0
27 TraesCS2D01G391600 chr6B 87.122 761 88 5 1 752 182379036 182379795 0.000000e+00 854.0
28 TraesCS2D01G391600 chr6B 83.505 97 13 1 1648 1744 592464549 592464456 2.880000e-13 87.9
29 TraesCS2D01G391600 chr5B 87.059 765 87 7 1 754 427821106 427821869 0.000000e+00 854.0
30 TraesCS2D01G391600 chr5B 93.727 271 16 1 4018 4287 608634668 608634938 6.990000e-109 405.0
31 TraesCS2D01G391600 chr5B 95.575 226 4 2 4636 4861 608634452 608634671 1.990000e-94 357.0
32 TraesCS2D01G391600 chr5B 76.344 279 48 14 1503 1767 662036915 662036641 3.640000e-27 134.0
33 TraesCS2D01G391600 chr1D 94.403 268 14 1 4021 4287 111701867 111701600 1.500000e-110 411.0
34 TraesCS2D01G391600 chr1D 94.096 271 15 1 4018 4287 111710701 111710971 1.500000e-110 411.0
35 TraesCS2D01G391600 chr1D 95.133 226 5 2 4636 4861 111702086 111701867 9.240000e-93 351.0
36 TraesCS2D01G391600 chr1D 95.133 226 5 2 4636 4861 111710485 111710704 9.240000e-93 351.0
37 TraesCS2D01G391600 chr7A 93.727 271 16 1 4018 4287 16021562 16021832 6.990000e-109 405.0
38 TraesCS2D01G391600 chr7A 93.358 271 17 1 4018 4287 660478917 660479187 3.250000e-107 399.0
39 TraesCS2D01G391600 chr7A 95.575 226 4 2 4636 4861 660478701 660478920 1.990000e-94 357.0
40 TraesCS2D01G391600 chr4A 92.989 271 18 1 4018 4287 718031039 718031309 1.510000e-105 394.0
41 TraesCS2D01G391600 chr4A 95.575 226 4 2 4636 4861 718030823 718031042 1.990000e-94 357.0
42 TraesCS2D01G391600 chr4A 95.312 64 3 0 1628 1691 536323212 536323275 1.030000e-17 102.0
43 TraesCS2D01G391600 chr1B 75.342 219 44 9 1542 1756 533324618 533324406 4.780000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G391600 chr2D 498767497 498773289 5792 True 10698.0 10698 100.0000 1 5793 1 chr2D.!!$R1 5792
1 TraesCS2D01G391600 chr2B 585891083 585895923 4840 True 3472.0 4281 93.7000 759 5483 2 chr2B.!!$R1 4724
2 TraesCS2D01G391600 chr2A 643439380 643444384 5004 True 1338.3 2447 93.2492 712 5483 5 chr2A.!!$R1 4771
3 TraesCS2D01G391600 chr5A 591602517 591603532 1015 False 1332.0 1332 90.3850 1699 2725 1 chr5A.!!$F3 1026
4 TraesCS2D01G391600 chr5A 296660149 296661155 1006 False 1301.0 1301 90.0190 1707 2725 1 chr5A.!!$F1 1018
5 TraesCS2D01G391600 chr5A 382302526 382303285 759 False 881.0 881 87.8110 1 752 1 chr5A.!!$F2 751
6 TraesCS2D01G391600 chr7D 170285150 170285906 756 False 929.0 929 89.0500 1 748 1 chr7D.!!$F1 747
7 TraesCS2D01G391600 chr7D 521713661 521714421 760 True 920.0 920 88.6990 1 752 1 chr7D.!!$R1 751
8 TraesCS2D01G391600 chr5D 480852436 480853191 755 False 913.0 913 88.6540 1 748 1 chr5D.!!$F1 747
9 TraesCS2D01G391600 chr6D 97810452 97811211 759 False 904.0 904 88.2890 1 752 1 chr6D.!!$F1 751
10 TraesCS2D01G391600 chr3B 828541494 828542184 690 True 904.0 904 90.4620 1 684 1 chr3B.!!$R2 683
11 TraesCS2D01G391600 chr3D 310694293 310695045 752 True 893.0 893 88.2280 1 747 1 chr3D.!!$R1 746
12 TraesCS2D01G391600 chr6B 182379036 182379795 759 False 854.0 854 87.1220 1 752 1 chr6B.!!$F1 751
13 TraesCS2D01G391600 chr5B 427821106 427821869 763 False 854.0 854 87.0590 1 754 1 chr5B.!!$F1 753

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
967 990 0.249911 AGACAGAACACCGAAGCACC 60.250 55.000 0.00 0.0 0.00 5.01 F
1229 1256 0.804989 CATCAACAAACCTCGCCTCC 59.195 55.000 0.00 0.0 0.00 4.30 F
2130 2158 0.833287 TTATCTGCTGTCCTGGCCTC 59.167 55.000 3.32 0.0 0.00 4.70 F
2885 3058 1.002659 CCCGGTATCACCAAACTGTCA 59.997 52.381 0.00 0.0 38.47 3.58 F
3676 3853 0.890683 GACAATCAAACTGGCCCTGG 59.109 55.000 0.00 0.0 0.00 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2881 3054 0.472925 TTGTAGGGCCAGTCCTGACA 60.473 55.000 6.18 0.00 37.75 3.58 R
2882 3055 0.690762 TTTGTAGGGCCAGTCCTGAC 59.309 55.000 6.18 0.00 37.75 3.51 R
3560 3737 1.139163 GCATTTTTGCTGTTCCGTGG 58.861 50.000 0.00 0.00 0.00 4.94 R
4031 4209 1.912110 GCTACTAGACAACTTGACGCG 59.088 52.381 3.53 3.53 0.00 6.01 R
4958 5242 0.698238 ATCAAGCACTGGGGCAACTA 59.302 50.000 0.00 0.00 35.83 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 0.596600 CACCGTCGTGCAACTACACT 60.597 55.000 0.00 0.00 38.45 3.55
91 99 2.930562 GGTCCTCAGTGGGTGGCT 60.931 66.667 0.00 0.00 36.20 4.75
104 112 0.310854 GGTGGCTTTTGTGAAGACCG 59.689 55.000 0.00 0.00 0.00 4.79
196 205 0.609662 GGGCATTTGGTGTGCTTCAT 59.390 50.000 0.00 0.00 42.16 2.57
239 249 1.742831 GCGCTGTAATGATGTGGGAAA 59.257 47.619 0.00 0.00 0.00 3.13
241 251 3.009723 CGCTGTAATGATGTGGGAAACT 58.990 45.455 0.00 0.00 0.00 2.66
257 267 3.119137 GGAAACTGAAACTTTGTGGCAGT 60.119 43.478 0.00 0.00 41.19 4.40
271 281 1.887854 TGGCAGTTGATGACATGTTGG 59.112 47.619 0.00 0.00 44.15 3.77
283 293 4.148079 TGACATGTTGGGTTATTCTGCAA 58.852 39.130 0.00 0.00 0.00 4.08
341 351 3.119029 CCAAACCCATGATTTCGAAGCAT 60.119 43.478 9.10 9.10 38.18 3.79
368 378 4.407365 AGAACAAGTTGAAATCCCGGAAT 58.593 39.130 10.54 0.00 0.00 3.01
398 408 1.334869 CGGCTCAGCTTGTGAACTTTT 59.665 47.619 0.00 0.00 33.60 2.27
654 665 2.037641 TGAGATATGTGGATGCCCGAAG 59.962 50.000 0.00 0.00 34.29 3.79
668 679 3.454447 TGCCCGAAGAGAAATATGAAGGA 59.546 43.478 0.00 0.00 0.00 3.36
669 680 4.103153 TGCCCGAAGAGAAATATGAAGGAT 59.897 41.667 0.00 0.00 0.00 3.24
670 681 5.066593 GCCCGAAGAGAAATATGAAGGATT 58.933 41.667 0.00 0.00 0.00 3.01
687 699 1.184322 ATTGTCCAATGCGCCCACAA 61.184 50.000 4.18 7.06 0.00 3.33
710 722 2.970639 CCTGATCACGTCCGTGGT 59.029 61.111 18.64 12.70 45.43 4.16
720 733 1.147600 GTCCGTGGTGTTTGAGGGT 59.852 57.895 0.00 0.00 0.00 4.34
731 745 0.404040 TTTGAGGGTCCGGATTTGCT 59.596 50.000 7.81 0.00 0.00 3.91
741 755 3.478540 GGATTTGCTAGTCCGGCTT 57.521 52.632 0.00 0.00 0.00 4.35
748 762 1.412710 TGCTAGTCCGGCTTTAGATGG 59.587 52.381 0.00 0.00 0.00 3.51
754 768 3.132467 AGTCCGGCTTTAGATGGTCTAAC 59.868 47.826 0.00 0.00 38.56 2.34
757 771 3.871594 CCGGCTTTAGATGGTCTAACTTG 59.128 47.826 0.00 0.00 38.56 3.16
767 781 3.420893 TGGTCTAACTTGGCCATTTCAG 58.579 45.455 6.09 2.68 0.00 3.02
791 805 1.510480 GCAAGAAGCTGCGGTGAAGT 61.510 55.000 2.76 0.00 41.15 3.01
795 809 0.741221 GAAGCTGCGGTGAAGTAGGG 60.741 60.000 0.00 0.00 0.00 3.53
812 826 8.368668 TGAAGTAGGGAAGAAAACAAAACAAAA 58.631 29.630 0.00 0.00 0.00 2.44
834 848 2.604373 CGAGCAAATGCACTTTTTCCGA 60.604 45.455 8.28 0.00 45.16 4.55
877 900 3.505293 GCTGGAGCACTCAAGAAGAAAAT 59.495 43.478 6.22 0.00 41.59 1.82
900 923 4.573201 TCTGCACTAAAAATATACCCGTGC 59.427 41.667 0.00 0.00 44.58 5.34
910 933 0.808453 ATACCCGTGCGCACATGTAC 60.808 55.000 37.03 12.38 0.00 2.90
911 934 3.848830 CCCGTGCGCACATGTACG 61.849 66.667 37.03 23.17 36.39 3.67
967 990 0.249911 AGACAGAACACCGAAGCACC 60.250 55.000 0.00 0.00 0.00 5.01
973 996 3.777925 CACCGAAGCACCGAAGCG 61.778 66.667 0.00 0.00 40.15 4.68
1081 1108 3.213402 CGCTCCTCCTCCTCGTCC 61.213 72.222 0.00 0.00 0.00 4.79
1229 1256 0.804989 CATCAACAAACCTCGCCTCC 59.195 55.000 0.00 0.00 0.00 4.30
1301 1328 1.668151 AAACCGTCCTTGCGCTCTC 60.668 57.895 9.73 0.00 0.00 3.20
1302 1329 3.916392 AACCGTCCTTGCGCTCTCG 62.916 63.158 9.73 6.51 39.07 4.04
1313 1340 1.429423 CGCTCTCGCCAAAATTCCC 59.571 57.895 0.00 0.00 0.00 3.97
1900 1927 2.667470 TGTTCGGCTAGATCTAAGGCT 58.333 47.619 17.44 0.00 0.00 4.58
1916 1943 3.055209 AGGCTAAAGTTTCCTCGGTTC 57.945 47.619 0.00 0.00 0.00 3.62
2046 2074 3.321950 AGGAAAGTATGGAGGGGATCAG 58.678 50.000 0.00 0.00 0.00 2.90
2048 2076 3.318313 GAAAGTATGGAGGGGATCAGGA 58.682 50.000 0.00 0.00 0.00 3.86
2093 2121 3.636764 AGTGCAAGTTCTTTTGGTTAGGG 59.363 43.478 0.00 0.00 0.00 3.53
2130 2158 0.833287 TTATCTGCTGTCCTGGCCTC 59.167 55.000 3.32 0.00 0.00 4.70
2195 2230 7.042797 ACAAAGATGCATAGAACAAAGTGTT 57.957 32.000 0.00 0.00 44.37 3.32
2306 2352 1.136000 CACATGCTCGATTTGCGTGAA 60.136 47.619 20.42 0.00 46.85 3.18
2352 2401 4.078363 ACATTTTGGTTCAGTATTCGCG 57.922 40.909 0.00 0.00 0.00 5.87
2384 2433 4.901197 TGGTGTAAGCATTAGACTTCCA 57.099 40.909 0.00 0.00 43.63 3.53
2494 2544 9.408069 GATAACTAGTTGTATCATTCTAACCCG 57.592 37.037 18.56 0.00 0.00 5.28
2499 2549 4.054780 TGTATCATTCTAACCCGTGCTC 57.945 45.455 0.00 0.00 0.00 4.26
2585 2756 5.866633 GGTATGCTGAGCTATGATAACTCAC 59.133 44.000 5.83 1.39 35.58 3.51
2681 2854 8.213679 TGATAACTGAGGAATTCTAGGAAATGG 58.786 37.037 5.23 0.00 0.00 3.16
2767 2940 7.646314 CATATTAATGGAGAGGTTGCAAGAAG 58.354 38.462 0.00 0.00 0.00 2.85
2879 3052 1.555992 CCAGTACCCGGTATCACCAAA 59.444 52.381 0.00 0.00 38.47 3.28
2880 3053 2.624636 CAGTACCCGGTATCACCAAAC 58.375 52.381 0.00 0.00 38.47 2.93
2881 3054 2.235402 CAGTACCCGGTATCACCAAACT 59.765 50.000 0.00 0.00 38.47 2.66
2882 3055 2.235402 AGTACCCGGTATCACCAAACTG 59.765 50.000 0.00 0.00 38.47 3.16
2883 3056 1.061546 ACCCGGTATCACCAAACTGT 58.938 50.000 0.00 0.00 38.47 3.55
2884 3057 1.002773 ACCCGGTATCACCAAACTGTC 59.997 52.381 0.00 0.00 38.47 3.51
2885 3058 1.002659 CCCGGTATCACCAAACTGTCA 59.997 52.381 0.00 0.00 38.47 3.58
2886 3059 2.346803 CCGGTATCACCAAACTGTCAG 58.653 52.381 0.00 0.00 38.47 3.51
2887 3060 2.346803 CGGTATCACCAAACTGTCAGG 58.653 52.381 4.53 0.00 38.47 3.86
3220 3397 5.542616 CACTATTCTGGTGCTTTTCAGAG 57.457 43.478 0.00 0.00 40.55 3.35
3264 3441 8.445275 CATATATGCCACACTTAAAAGGTGTA 57.555 34.615 0.00 0.00 44.75 2.90
3279 3456 7.719871 AAAAGGTGTAGTAGCAGAGATCTAA 57.280 36.000 0.00 0.00 0.00 2.10
3280 3457 7.906199 AAAGGTGTAGTAGCAGAGATCTAAT 57.094 36.000 0.00 0.00 0.00 1.73
3346 3523 5.199024 TGAAATGTGCTGTTAATGTGCTT 57.801 34.783 0.00 0.00 0.00 3.91
3402 3579 3.776969 TCAGATGACAATTAGCCTGAGGT 59.223 43.478 0.00 0.00 0.00 3.85
3449 3626 2.282820 GTGCTCTGCGACTAAACTATGC 59.717 50.000 0.00 0.00 0.00 3.14
3496 3673 7.507956 TGTTATATAGCTCCCTTACTGTTAGCA 59.492 37.037 0.00 0.00 35.63 3.49
3557 3734 6.921486 TGTATGGTAGAGAACAAACCACTA 57.079 37.500 0.00 0.00 45.63 2.74
3560 3737 8.038944 TGTATGGTAGAGAACAAACCACTATTC 58.961 37.037 0.00 0.00 45.63 1.75
3590 3767 4.449743 ACAGCAAAAATGCACATCATCAAC 59.550 37.500 3.41 0.00 37.25 3.18
3676 3853 0.890683 GACAATCAAACTGGCCCTGG 59.109 55.000 0.00 0.00 0.00 4.45
3767 3944 2.303311 GTTGGTAGCTCTTTGAGGTCCT 59.697 50.000 2.41 0.00 40.94 3.85
3913 4091 8.709646 GTTAGTGTTCGAATTCAAACAGACTAT 58.290 33.333 12.18 0.36 36.14 2.12
4058 4237 6.129062 CGTCAAGTTGTCTAGTAGCTTGAAAG 60.129 42.308 20.95 16.53 44.44 2.62
4080 4259 4.287067 AGGTTGAGGTGCTTCTTTGAGATA 59.713 41.667 0.00 0.00 0.00 1.98
4103 4282 4.216257 AGTTTCCTGAATGACGGATTTGTG 59.784 41.667 0.00 0.00 0.00 3.33
4228 4422 7.801104 TCTATGTCAGGCCATTTCATTACTTA 58.199 34.615 5.01 0.00 0.00 2.24
4266 4543 2.661504 TCGCATGAGAACAAACAACG 57.338 45.000 0.00 0.00 0.00 4.10
4439 4716 1.599542 GTCCTAATCAGCAATGTCGGC 59.400 52.381 0.00 0.00 0.00 5.54
4496 4773 2.183046 GAGTCTGGCTGGCTCGAC 59.817 66.667 10.29 13.43 37.69 4.20
4791 5068 9.549984 AGGAAAGGAATATAATCTCTACCCTAC 57.450 37.037 0.00 0.00 0.00 3.18
4982 5266 1.005805 TGCCCCAGTGCTTGATGTATT 59.994 47.619 0.00 0.00 0.00 1.89
4994 5278 8.454106 AGTGCTTGATGTATTATTCAGAAACAC 58.546 33.333 0.00 0.00 0.00 3.32
5102 5390 8.783903 ACTAGATTATTTATACCCCACCAACAA 58.216 33.333 0.00 0.00 0.00 2.83
5120 5408 8.277713 CACCAACAATGAAACATTCAAGATTTC 58.722 33.333 0.00 0.00 43.95 2.17
5168 5585 7.651027 ATTTCAAGATTCATTCCCCAGTAAG 57.349 36.000 0.00 0.00 0.00 2.34
5178 5595 2.424793 TCCCCAGTAAGACCAAAACCT 58.575 47.619 0.00 0.00 0.00 3.50
5190 5607 4.661709 AGACCAAAACCTAACAGAAGGGTA 59.338 41.667 0.00 0.00 41.32 3.69
5234 5651 8.947940 GCAACGAGTGATAATTATTCATTCAAC 58.052 33.333 0.00 0.00 0.00 3.18
5237 5654 9.599866 ACGAGTGATAATTATTCATTCAACTGA 57.400 29.630 0.00 0.00 0.00 3.41
5325 5742 6.548441 AACATTGGTTCAATTGCATTTCAG 57.452 33.333 0.00 0.00 31.05 3.02
5334 5751 9.423061 GGTTCAATTGCATTTCAGTTATAACTT 57.577 29.630 15.60 0.00 37.08 2.66
5375 5792 6.244999 CAGTAGAGCTATACGATCTAAAGCG 58.755 44.000 12.62 0.00 41.86 4.68
5413 5830 9.490379 ACAGTAGAACAAATTAACCAGACTTAG 57.510 33.333 0.00 0.00 0.00 2.18
5441 5858 3.698539 TCAAAACCAGATTCAACACAGCA 59.301 39.130 0.00 0.00 0.00 4.41
5444 5861 4.734398 AACCAGATTCAACACAGCAAAA 57.266 36.364 0.00 0.00 0.00 2.44
5483 5900 4.038042 TCAGGAATAGGTATCTTGCGTCTG 59.962 45.833 0.00 0.00 0.00 3.51
5484 5901 3.961408 AGGAATAGGTATCTTGCGTCTGT 59.039 43.478 0.00 0.00 0.00 3.41
5485 5902 5.009710 CAGGAATAGGTATCTTGCGTCTGTA 59.990 44.000 0.00 0.00 0.00 2.74
5486 5903 5.775701 AGGAATAGGTATCTTGCGTCTGTAT 59.224 40.000 0.00 0.00 0.00 2.29
5487 5904 6.071840 AGGAATAGGTATCTTGCGTCTGTATC 60.072 42.308 0.00 0.00 0.00 2.24
5488 5905 6.294564 GGAATAGGTATCTTGCGTCTGTATCA 60.295 42.308 0.00 0.00 0.00 2.15
5489 5906 6.650427 ATAGGTATCTTGCGTCTGTATCAA 57.350 37.500 0.00 0.00 0.00 2.57
5490 5907 4.683832 AGGTATCTTGCGTCTGTATCAAC 58.316 43.478 0.00 0.00 0.00 3.18
5491 5908 4.159693 AGGTATCTTGCGTCTGTATCAACA 59.840 41.667 0.00 0.00 0.00 3.33
5492 5909 4.267928 GGTATCTTGCGTCTGTATCAACAC 59.732 45.833 0.00 0.00 0.00 3.32
5493 5910 3.378911 TCTTGCGTCTGTATCAACACA 57.621 42.857 0.00 0.00 0.00 3.72
5494 5911 3.317150 TCTTGCGTCTGTATCAACACAG 58.683 45.455 0.00 0.00 46.04 3.66
5505 5922 6.544038 TGTATCAACACAGATTCAACACAG 57.456 37.500 0.00 0.00 0.00 3.66
5506 5923 3.969117 TCAACACAGATTCAACACAGC 57.031 42.857 0.00 0.00 0.00 4.40
5507 5924 3.277715 TCAACACAGATTCAACACAGCA 58.722 40.909 0.00 0.00 0.00 4.41
5508 5925 3.693578 TCAACACAGATTCAACACAGCAA 59.306 39.130 0.00 0.00 0.00 3.91
5509 5926 4.157472 TCAACACAGATTCAACACAGCAAA 59.843 37.500 0.00 0.00 0.00 3.68
5510 5927 4.717233 ACACAGATTCAACACAGCAAAA 57.283 36.364 0.00 0.00 0.00 2.44
5511 5928 4.423732 ACACAGATTCAACACAGCAAAAC 58.576 39.130 0.00 0.00 0.00 2.43
5512 5929 4.082300 ACACAGATTCAACACAGCAAAACA 60.082 37.500 0.00 0.00 0.00 2.83
5513 5930 4.266029 CACAGATTCAACACAGCAAAACAC 59.734 41.667 0.00 0.00 0.00 3.32
5514 5931 4.158394 ACAGATTCAACACAGCAAAACACT 59.842 37.500 0.00 0.00 0.00 3.55
5515 5932 5.104374 CAGATTCAACACAGCAAAACACTT 58.896 37.500 0.00 0.00 0.00 3.16
5516 5933 5.005012 CAGATTCAACACAGCAAAACACTTG 59.995 40.000 0.00 0.00 0.00 3.16
5517 5934 3.229276 TCAACACAGCAAAACACTTGG 57.771 42.857 0.00 0.00 0.00 3.61
5518 5935 2.560542 TCAACACAGCAAAACACTTGGT 59.439 40.909 0.00 0.00 0.00 3.67
5519 5936 2.923020 CAACACAGCAAAACACTTGGTC 59.077 45.455 0.00 0.00 0.00 4.02
5520 5937 2.166829 ACACAGCAAAACACTTGGTCA 58.833 42.857 0.00 0.00 0.00 4.02
5521 5938 2.164219 ACACAGCAAAACACTTGGTCAG 59.836 45.455 0.00 0.00 0.00 3.51
5522 5939 1.750778 ACAGCAAAACACTTGGTCAGG 59.249 47.619 0.00 0.00 0.00 3.86
5523 5940 2.023673 CAGCAAAACACTTGGTCAGGA 58.976 47.619 0.00 0.00 0.00 3.86
5524 5941 2.624838 CAGCAAAACACTTGGTCAGGAT 59.375 45.455 0.00 0.00 0.00 3.24
5525 5942 3.068590 CAGCAAAACACTTGGTCAGGATT 59.931 43.478 0.00 0.00 0.00 3.01
5526 5943 3.706086 AGCAAAACACTTGGTCAGGATTT 59.294 39.130 0.00 0.00 0.00 2.17
5527 5944 4.051237 GCAAAACACTTGGTCAGGATTTC 58.949 43.478 0.00 0.00 0.00 2.17
5528 5945 4.441356 GCAAAACACTTGGTCAGGATTTCA 60.441 41.667 0.00 0.00 0.00 2.69
5529 5946 5.284079 CAAAACACTTGGTCAGGATTTCAG 58.716 41.667 0.00 0.00 0.00 3.02
5530 5947 3.146104 ACACTTGGTCAGGATTTCAGG 57.854 47.619 0.00 0.00 0.00 3.86
5531 5948 2.711009 ACACTTGGTCAGGATTTCAGGA 59.289 45.455 0.00 0.00 0.00 3.86
5532 5949 3.138283 ACACTTGGTCAGGATTTCAGGAA 59.862 43.478 0.00 0.00 0.00 3.36
5533 5950 4.202609 ACACTTGGTCAGGATTTCAGGAAT 60.203 41.667 0.00 0.00 0.00 3.01
5534 5951 5.014123 ACACTTGGTCAGGATTTCAGGAATA 59.986 40.000 0.00 0.00 0.00 1.75
5535 5952 5.587844 CACTTGGTCAGGATTTCAGGAATAG 59.412 44.000 0.00 0.00 0.00 1.73
5536 5953 4.778213 TGGTCAGGATTTCAGGAATAGG 57.222 45.455 0.00 0.00 0.00 2.57
5537 5954 4.111577 TGGTCAGGATTTCAGGAATAGGT 58.888 43.478 0.00 0.00 0.00 3.08
5538 5955 5.285401 TGGTCAGGATTTCAGGAATAGGTA 58.715 41.667 0.00 0.00 0.00 3.08
5539 5956 5.911178 TGGTCAGGATTTCAGGAATAGGTAT 59.089 40.000 0.00 0.00 0.00 2.73
5540 5957 6.043243 TGGTCAGGATTTCAGGAATAGGTATC 59.957 42.308 0.00 0.00 0.00 2.24
5541 5958 6.271159 GGTCAGGATTTCAGGAATAGGTATCT 59.729 42.308 0.00 0.00 0.00 1.98
5542 5959 7.202139 GGTCAGGATTTCAGGAATAGGTATCTT 60.202 40.741 0.00 0.00 0.00 2.40
5543 5960 7.659390 GTCAGGATTTCAGGAATAGGTATCTTG 59.341 40.741 0.00 0.00 0.00 3.02
5544 5961 6.429385 CAGGATTTCAGGAATAGGTATCTTGC 59.571 42.308 0.00 0.00 0.00 4.01
5545 5962 5.409826 GGATTTCAGGAATAGGTATCTTGCG 59.590 44.000 0.00 0.00 0.00 4.85
5546 5963 5.353394 TTTCAGGAATAGGTATCTTGCGT 57.647 39.130 0.00 0.00 0.00 5.24
5547 5964 4.585955 TCAGGAATAGGTATCTTGCGTC 57.414 45.455 0.00 0.00 0.00 5.19
5548 5965 4.215908 TCAGGAATAGGTATCTTGCGTCT 58.784 43.478 0.00 0.00 0.00 4.18
5549 5966 4.038042 TCAGGAATAGGTATCTTGCGTCTG 59.962 45.833 0.00 0.00 0.00 3.51
5550 5967 3.961408 AGGAATAGGTATCTTGCGTCTGT 59.039 43.478 0.00 0.00 0.00 3.41
5551 5968 5.009710 CAGGAATAGGTATCTTGCGTCTGTA 59.990 44.000 0.00 0.00 0.00 2.74
5552 5969 5.775701 AGGAATAGGTATCTTGCGTCTGTAT 59.224 40.000 0.00 0.00 0.00 2.29
5553 5970 6.071840 AGGAATAGGTATCTTGCGTCTGTATC 60.072 42.308 0.00 0.00 0.00 2.24
5554 5971 6.294564 GGAATAGGTATCTTGCGTCTGTATCA 60.295 42.308 0.00 0.00 0.00 2.15
5555 5972 6.650427 ATAGGTATCTTGCGTCTGTATCAA 57.350 37.500 0.00 0.00 0.00 2.57
5556 5973 4.683832 AGGTATCTTGCGTCTGTATCAAC 58.316 43.478 0.00 0.00 0.00 3.18
5557 5974 4.159693 AGGTATCTTGCGTCTGTATCAACA 59.840 41.667 0.00 0.00 0.00 3.33
5558 5975 4.267928 GGTATCTTGCGTCTGTATCAACAC 59.732 45.833 0.00 0.00 0.00 3.32
5559 5976 3.378911 TCTTGCGTCTGTATCAACACA 57.621 42.857 0.00 0.00 0.00 3.72
5560 5977 3.317150 TCTTGCGTCTGTATCAACACAG 58.683 45.455 0.00 0.00 46.04 3.66
5571 5988 6.544038 TGTATCAACACAGATTCAACACAG 57.456 37.500 0.00 0.00 0.00 3.66
5572 5989 3.969117 TCAACACAGATTCAACACAGC 57.031 42.857 0.00 0.00 0.00 4.40
5573 5990 3.277715 TCAACACAGATTCAACACAGCA 58.722 40.909 0.00 0.00 0.00 4.41
5574 5991 3.693578 TCAACACAGATTCAACACAGCAA 59.306 39.130 0.00 0.00 0.00 3.91
5575 5992 4.157472 TCAACACAGATTCAACACAGCAAA 59.843 37.500 0.00 0.00 0.00 3.68
5576 5993 4.717233 ACACAGATTCAACACAGCAAAA 57.283 36.364 0.00 0.00 0.00 2.44
5577 5994 4.423732 ACACAGATTCAACACAGCAAAAC 58.576 39.130 0.00 0.00 0.00 2.43
5578 5995 4.082300 ACACAGATTCAACACAGCAAAACA 60.082 37.500 0.00 0.00 0.00 2.83
5579 5996 4.266029 CACAGATTCAACACAGCAAAACAC 59.734 41.667 0.00 0.00 0.00 3.32
5580 5997 4.158394 ACAGATTCAACACAGCAAAACACT 59.842 37.500 0.00 0.00 0.00 3.55
5581 5998 5.104374 CAGATTCAACACAGCAAAACACTT 58.896 37.500 0.00 0.00 0.00 3.16
5582 5999 5.005012 CAGATTCAACACAGCAAAACACTTG 59.995 40.000 0.00 0.00 0.00 3.16
5583 6000 3.229276 TCAACACAGCAAAACACTTGG 57.771 42.857 0.00 0.00 0.00 3.61
5584 6001 2.560542 TCAACACAGCAAAACACTTGGT 59.439 40.909 0.00 0.00 0.00 3.67
5585 6002 2.923020 CAACACAGCAAAACACTTGGTC 59.077 45.455 0.00 0.00 0.00 4.02
5586 6003 2.166829 ACACAGCAAAACACTTGGTCA 58.833 42.857 0.00 0.00 0.00 4.02
5587 6004 2.164219 ACACAGCAAAACACTTGGTCAG 59.836 45.455 0.00 0.00 0.00 3.51
5588 6005 1.750778 ACAGCAAAACACTTGGTCAGG 59.249 47.619 0.00 0.00 0.00 3.86
5589 6006 2.023673 CAGCAAAACACTTGGTCAGGA 58.976 47.619 0.00 0.00 0.00 3.86
5590 6007 2.624838 CAGCAAAACACTTGGTCAGGAT 59.375 45.455 0.00 0.00 0.00 3.24
5591 6008 3.068590 CAGCAAAACACTTGGTCAGGATT 59.931 43.478 0.00 0.00 0.00 3.01
5592 6009 3.706086 AGCAAAACACTTGGTCAGGATTT 59.294 39.130 0.00 0.00 0.00 2.17
5593 6010 4.162131 AGCAAAACACTTGGTCAGGATTTT 59.838 37.500 0.00 0.00 0.00 1.82
5594 6011 5.362430 AGCAAAACACTTGGTCAGGATTTTA 59.638 36.000 0.00 0.00 0.00 1.52
5595 6012 5.691754 GCAAAACACTTGGTCAGGATTTTAG 59.308 40.000 0.00 0.00 0.00 1.85
5596 6013 6.682861 GCAAAACACTTGGTCAGGATTTTAGT 60.683 38.462 0.00 0.00 0.00 2.24
5597 6014 7.264947 CAAAACACTTGGTCAGGATTTTAGTT 58.735 34.615 0.00 0.00 0.00 2.24
5598 6015 7.418337 AAACACTTGGTCAGGATTTTAGTTT 57.582 32.000 0.00 0.00 0.00 2.66
5599 6016 6.635030 ACACTTGGTCAGGATTTTAGTTTC 57.365 37.500 0.00 0.00 0.00 2.78
5600 6017 6.126409 ACACTTGGTCAGGATTTTAGTTTCA 58.874 36.000 0.00 0.00 0.00 2.69
5601 6018 6.039382 ACACTTGGTCAGGATTTTAGTTTCAC 59.961 38.462 0.00 0.00 0.00 3.18
5602 6019 6.039270 CACTTGGTCAGGATTTTAGTTTCACA 59.961 38.462 0.00 0.00 0.00 3.58
5603 6020 6.777580 ACTTGGTCAGGATTTTAGTTTCACAT 59.222 34.615 0.00 0.00 0.00 3.21
5604 6021 7.942341 ACTTGGTCAGGATTTTAGTTTCACATA 59.058 33.333 0.00 0.00 0.00 2.29
5605 6022 8.877864 TTGGTCAGGATTTTAGTTTCACATAT 57.122 30.769 0.00 0.00 0.00 1.78
5606 6023 8.877864 TGGTCAGGATTTTAGTTTCACATATT 57.122 30.769 0.00 0.00 0.00 1.28
5607 6024 9.308000 TGGTCAGGATTTTAGTTTCACATATTT 57.692 29.630 0.00 0.00 0.00 1.40
5629 6046 4.762289 ACAGAGAATTCATACCACTCCC 57.238 45.455 8.44 0.00 0.00 4.30
5630 6047 4.104086 ACAGAGAATTCATACCACTCCCA 58.896 43.478 8.44 0.00 0.00 4.37
5631 6048 4.536090 ACAGAGAATTCATACCACTCCCAA 59.464 41.667 8.44 0.00 0.00 4.12
5632 6049 4.878397 CAGAGAATTCATACCACTCCCAAC 59.122 45.833 8.44 0.00 0.00 3.77
5633 6050 4.536090 AGAGAATTCATACCACTCCCAACA 59.464 41.667 8.44 0.00 0.00 3.33
5634 6051 5.014123 AGAGAATTCATACCACTCCCAACAA 59.986 40.000 8.44 0.00 0.00 2.83
5635 6052 5.831103 AGAATTCATACCACTCCCAACAAT 58.169 37.500 8.44 0.00 0.00 2.71
5636 6053 5.653769 AGAATTCATACCACTCCCAACAATG 59.346 40.000 8.44 0.00 0.00 2.82
5637 6054 4.649267 TTCATACCACTCCCAACAATGA 57.351 40.909 0.00 0.00 0.00 2.57
5638 6055 4.649267 TCATACCACTCCCAACAATGAA 57.351 40.909 0.00 0.00 0.00 2.57
5639 6056 5.191727 TCATACCACTCCCAACAATGAAT 57.808 39.130 0.00 0.00 0.00 2.57
5640 6057 5.192927 TCATACCACTCCCAACAATGAATC 58.807 41.667 0.00 0.00 0.00 2.52
5641 6058 2.807676 ACCACTCCCAACAATGAATCC 58.192 47.619 0.00 0.00 0.00 3.01
5642 6059 2.379907 ACCACTCCCAACAATGAATCCT 59.620 45.455 0.00 0.00 0.00 3.24
5643 6060 3.019564 CCACTCCCAACAATGAATCCTC 58.980 50.000 0.00 0.00 0.00 3.71
5644 6061 3.308688 CCACTCCCAACAATGAATCCTCT 60.309 47.826 0.00 0.00 0.00 3.69
5645 6062 3.693085 CACTCCCAACAATGAATCCTCTG 59.307 47.826 0.00 0.00 0.00 3.35
5646 6063 2.686915 CTCCCAACAATGAATCCTCTGC 59.313 50.000 0.00 0.00 0.00 4.26
5647 6064 2.041485 TCCCAACAATGAATCCTCTGCA 59.959 45.455 0.00 0.00 0.00 4.41
5648 6065 3.028850 CCCAACAATGAATCCTCTGCAT 58.971 45.455 0.00 0.00 0.00 3.96
5649 6066 3.067742 CCCAACAATGAATCCTCTGCATC 59.932 47.826 0.00 0.00 0.00 3.91
5650 6067 3.952323 CCAACAATGAATCCTCTGCATCT 59.048 43.478 0.00 0.00 0.00 2.90
5651 6068 4.202020 CCAACAATGAATCCTCTGCATCTG 60.202 45.833 0.00 0.00 0.00 2.90
5652 6069 4.232188 ACAATGAATCCTCTGCATCTGT 57.768 40.909 0.00 0.00 0.00 3.41
5653 6070 5.363562 ACAATGAATCCTCTGCATCTGTA 57.636 39.130 0.00 0.00 0.00 2.74
5654 6071 5.366460 ACAATGAATCCTCTGCATCTGTAG 58.634 41.667 0.00 0.00 0.00 2.74
5655 6072 5.129980 ACAATGAATCCTCTGCATCTGTAGA 59.870 40.000 0.00 0.00 35.51 2.59
5656 6073 6.183361 ACAATGAATCCTCTGCATCTGTAGAT 60.183 38.462 0.00 0.00 36.24 1.98
5657 6074 5.465532 TGAATCCTCTGCATCTGTAGATC 57.534 43.478 0.00 0.00 36.24 2.75
5658 6075 5.146298 TGAATCCTCTGCATCTGTAGATCT 58.854 41.667 0.00 0.00 36.24 2.75
5659 6076 5.010820 TGAATCCTCTGCATCTGTAGATCTG 59.989 44.000 5.18 0.00 36.24 2.90
5660 6077 2.627221 TCCTCTGCATCTGTAGATCTGC 59.373 50.000 5.18 4.30 36.24 4.26
5661 6078 2.364647 CCTCTGCATCTGTAGATCTGCA 59.635 50.000 13.21 13.21 37.62 4.41
5662 6079 3.382855 CTCTGCATCTGTAGATCTGCAC 58.617 50.000 9.69 0.00 35.76 4.57
5663 6080 2.762327 TCTGCATCTGTAGATCTGCACA 59.238 45.455 9.69 3.73 35.76 4.57
5664 6081 3.124560 CTGCATCTGTAGATCTGCACAG 58.875 50.000 16.52 16.52 42.88 3.66
5670 6087 5.728637 TCTGTAGATCTGCACAGAAAGAA 57.271 39.130 21.05 3.62 46.13 2.52
5671 6088 6.101650 TCTGTAGATCTGCACAGAAAGAAA 57.898 37.500 21.05 3.02 46.13 2.52
5672 6089 6.524734 TCTGTAGATCTGCACAGAAAGAAAA 58.475 36.000 21.05 2.43 46.13 2.29
5673 6090 6.992123 TCTGTAGATCTGCACAGAAAGAAAAA 59.008 34.615 21.05 1.83 46.13 1.94
5674 6091 6.959361 TGTAGATCTGCACAGAAAGAAAAAC 58.041 36.000 9.69 0.00 41.36 2.43
5675 6092 5.444663 AGATCTGCACAGAAAGAAAAACC 57.555 39.130 4.14 0.00 41.36 3.27
5676 6093 4.889409 AGATCTGCACAGAAAGAAAAACCA 59.111 37.500 4.14 0.00 41.36 3.67
5677 6094 5.360714 AGATCTGCACAGAAAGAAAAACCAA 59.639 36.000 4.14 0.00 41.36 3.67
5678 6095 4.997565 TCTGCACAGAAAGAAAAACCAAG 58.002 39.130 0.00 0.00 33.91 3.61
5679 6096 4.704540 TCTGCACAGAAAGAAAAACCAAGA 59.295 37.500 0.00 0.00 33.91 3.02
5680 6097 5.360714 TCTGCACAGAAAGAAAAACCAAGAT 59.639 36.000 0.00 0.00 33.91 2.40
5681 6098 5.976458 TGCACAGAAAGAAAAACCAAGATT 58.024 33.333 0.00 0.00 0.00 2.40
5682 6099 6.042143 TGCACAGAAAGAAAAACCAAGATTC 58.958 36.000 0.00 0.00 0.00 2.52
5683 6100 5.173854 GCACAGAAAGAAAAACCAAGATTCG 59.826 40.000 0.00 0.00 0.00 3.34
5684 6101 6.265577 CACAGAAAGAAAAACCAAGATTCGT 58.734 36.000 0.00 0.00 0.00 3.85
5685 6102 6.751888 CACAGAAAGAAAAACCAAGATTCGTT 59.248 34.615 0.00 0.00 0.00 3.85
5686 6103 6.972901 ACAGAAAGAAAAACCAAGATTCGTTC 59.027 34.615 0.00 0.00 39.93 3.95
5687 6104 6.417930 CAGAAAGAAAAACCAAGATTCGTTCC 59.582 38.462 8.91 0.00 40.25 3.62
5688 6105 4.848562 AGAAAAACCAAGATTCGTTCCC 57.151 40.909 0.00 0.00 0.00 3.97
5689 6106 3.572682 AGAAAAACCAAGATTCGTTCCCC 59.427 43.478 0.00 0.00 0.00 4.81
5690 6107 2.668144 AAACCAAGATTCGTTCCCCA 57.332 45.000 0.00 0.00 0.00 4.96
5691 6108 2.200373 AACCAAGATTCGTTCCCCAG 57.800 50.000 0.00 0.00 0.00 4.45
5692 6109 1.064825 ACCAAGATTCGTTCCCCAGT 58.935 50.000 0.00 0.00 0.00 4.00
5693 6110 1.271379 ACCAAGATTCGTTCCCCAGTG 60.271 52.381 0.00 0.00 0.00 3.66
5694 6111 1.003118 CCAAGATTCGTTCCCCAGTGA 59.997 52.381 0.00 0.00 0.00 3.41
5695 6112 2.552155 CCAAGATTCGTTCCCCAGTGAA 60.552 50.000 0.00 0.00 0.00 3.18
5696 6113 3.146066 CAAGATTCGTTCCCCAGTGAAA 58.854 45.455 0.00 0.00 0.00 2.69
5697 6114 2.779506 AGATTCGTTCCCCAGTGAAAC 58.220 47.619 0.00 0.00 0.00 2.78
5698 6115 1.810755 GATTCGTTCCCCAGTGAAACC 59.189 52.381 0.00 0.00 37.80 3.27
5699 6116 0.533308 TTCGTTCCCCAGTGAAACCG 60.533 55.000 0.00 0.00 37.80 4.44
5700 6117 1.070105 CGTTCCCCAGTGAAACCGA 59.930 57.895 0.00 0.00 37.80 4.69
5701 6118 0.533308 CGTTCCCCAGTGAAACCGAA 60.533 55.000 0.00 0.00 37.80 4.30
5702 6119 0.949397 GTTCCCCAGTGAAACCGAAC 59.051 55.000 0.00 0.00 37.80 3.95
5703 6120 0.841289 TTCCCCAGTGAAACCGAACT 59.159 50.000 0.00 0.00 37.80 3.01
5704 6121 1.719529 TCCCCAGTGAAACCGAACTA 58.280 50.000 0.00 0.00 37.80 2.24
5705 6122 2.048601 TCCCCAGTGAAACCGAACTAA 58.951 47.619 0.00 0.00 37.80 2.24
5706 6123 2.438763 TCCCCAGTGAAACCGAACTAAA 59.561 45.455 0.00 0.00 37.80 1.85
5707 6124 3.073356 TCCCCAGTGAAACCGAACTAAAT 59.927 43.478 0.00 0.00 37.80 1.40
5708 6125 3.439129 CCCCAGTGAAACCGAACTAAATC 59.561 47.826 0.00 0.00 37.80 2.17
5709 6126 4.069304 CCCAGTGAAACCGAACTAAATCA 58.931 43.478 0.00 0.00 37.80 2.57
5710 6127 4.517453 CCCAGTGAAACCGAACTAAATCAA 59.483 41.667 0.00 0.00 37.80 2.57
5711 6128 5.009210 CCCAGTGAAACCGAACTAAATCAAA 59.991 40.000 0.00 0.00 37.80 2.69
5712 6129 6.460399 CCCAGTGAAACCGAACTAAATCAAAA 60.460 38.462 0.00 0.00 37.80 2.44
5713 6130 6.636850 CCAGTGAAACCGAACTAAATCAAAAG 59.363 38.462 0.00 0.00 37.80 2.27
5714 6131 6.636850 CAGTGAAACCGAACTAAATCAAAAGG 59.363 38.462 0.00 0.00 37.80 3.11
5715 6132 6.544564 AGTGAAACCGAACTAAATCAAAAGGA 59.455 34.615 0.00 0.00 37.80 3.36
5716 6133 7.230712 AGTGAAACCGAACTAAATCAAAAGGAT 59.769 33.333 0.00 0.00 37.80 3.24
5717 6134 7.326063 GTGAAACCGAACTAAATCAAAAGGATG 59.674 37.037 0.00 0.00 36.02 3.51
5718 6135 5.310720 ACCGAACTAAATCAAAAGGATGC 57.689 39.130 0.00 0.00 36.02 3.91
5719 6136 4.764823 ACCGAACTAAATCAAAAGGATGCA 59.235 37.500 0.00 0.00 36.02 3.96
5720 6137 5.418840 ACCGAACTAAATCAAAAGGATGCAT 59.581 36.000 0.00 0.00 36.02 3.96
5721 6138 5.973565 CCGAACTAAATCAAAAGGATGCATC 59.026 40.000 18.81 18.81 36.02 3.91
5722 6139 6.183360 CCGAACTAAATCAAAAGGATGCATCT 60.183 38.462 25.28 9.51 36.02 2.90
5723 6140 6.909357 CGAACTAAATCAAAAGGATGCATCTC 59.091 38.462 25.28 15.54 36.02 2.75
5724 6141 7.201679 CGAACTAAATCAAAAGGATGCATCTCT 60.202 37.037 25.28 17.44 36.02 3.10
5725 6142 7.951347 ACTAAATCAAAAGGATGCATCTCTT 57.049 32.000 25.28 21.65 36.02 2.85
5726 6143 7.994194 ACTAAATCAAAAGGATGCATCTCTTC 58.006 34.615 25.28 9.46 36.02 2.87
5727 6144 7.833183 ACTAAATCAAAAGGATGCATCTCTTCT 59.167 33.333 25.28 11.65 36.02 2.85
5728 6145 6.452494 AATCAAAAGGATGCATCTCTTCTG 57.548 37.500 25.28 20.95 36.02 3.02
5729 6146 3.693085 TCAAAAGGATGCATCTCTTCTGC 59.307 43.478 25.28 7.64 40.10 4.26
5736 6153 2.014857 TGCATCTCTTCTGCAGATTGC 58.985 47.619 19.04 19.83 44.30 3.56
5749 6166 4.921470 GCAGATTGCAACGAGTAGTAAA 57.079 40.909 0.00 0.00 44.26 2.01
5750 6167 5.470845 GCAGATTGCAACGAGTAGTAAAT 57.529 39.130 0.00 0.00 44.26 1.40
5751 6168 5.493735 GCAGATTGCAACGAGTAGTAAATC 58.506 41.667 0.00 0.00 44.26 2.17
5752 6169 5.718246 CAGATTGCAACGAGTAGTAAATCG 58.282 41.667 0.00 4.85 44.36 3.34
5753 6170 8.082850 GCAGATTGCAACGAGTAGTAAATCGT 62.083 42.308 0.00 5.98 44.22 3.73
5764 6181 8.739193 CGAGTAGTAAATCGTTCATTCAATTG 57.261 34.615 0.00 0.00 34.30 2.32
5765 6182 7.370836 CGAGTAGTAAATCGTTCATTCAATTGC 59.629 37.037 0.00 0.00 34.30 3.56
5766 6183 8.039603 AGTAGTAAATCGTTCATTCAATTGCA 57.960 30.769 0.00 0.00 0.00 4.08
5767 6184 8.677300 AGTAGTAAATCGTTCATTCAATTGCAT 58.323 29.630 0.00 0.00 0.00 3.96
5768 6185 9.289303 GTAGTAAATCGTTCATTCAATTGCATT 57.711 29.630 0.00 0.00 0.00 3.56
5769 6186 8.761575 AGTAAATCGTTCATTCAATTGCATTT 57.238 26.923 0.00 0.00 0.00 2.32
5770 6187 8.863049 AGTAAATCGTTCATTCAATTGCATTTC 58.137 29.630 0.00 0.00 0.00 2.17
5771 6188 7.655236 AAATCGTTCATTCAATTGCATTTCA 57.345 28.000 0.00 0.00 0.00 2.69
5772 6189 6.880822 ATCGTTCATTCAATTGCATTTCAG 57.119 33.333 0.00 0.00 0.00 3.02
5773 6190 4.622313 TCGTTCATTCAATTGCATTTCAGC 59.378 37.500 0.00 0.00 0.00 4.26
5774 6191 4.624024 CGTTCATTCAATTGCATTTCAGCT 59.376 37.500 0.00 0.00 34.99 4.24
5775 6192 5.801444 CGTTCATTCAATTGCATTTCAGCTA 59.199 36.000 0.00 0.00 34.99 3.32
5776 6193 6.308524 CGTTCATTCAATTGCATTTCAGCTAA 59.691 34.615 0.00 0.00 34.99 3.09
5777 6194 7.462331 CGTTCATTCAATTGCATTTCAGCTAAG 60.462 37.037 0.00 0.00 34.99 2.18
5778 6195 6.927416 TCATTCAATTGCATTTCAGCTAAGT 58.073 32.000 0.00 0.00 34.99 2.24
5779 6196 7.031372 TCATTCAATTGCATTTCAGCTAAGTC 58.969 34.615 0.00 0.00 34.99 3.01
5780 6197 5.963176 TCAATTGCATTTCAGCTAAGTCA 57.037 34.783 0.00 0.00 34.99 3.41
5781 6198 6.330004 TCAATTGCATTTCAGCTAAGTCAA 57.670 33.333 0.00 0.00 34.99 3.18
5782 6199 6.747125 TCAATTGCATTTCAGCTAAGTCAAA 58.253 32.000 0.00 0.00 34.99 2.69
5783 6200 7.380536 TCAATTGCATTTCAGCTAAGTCAAAT 58.619 30.769 0.00 0.00 34.99 2.32
5784 6201 7.543172 TCAATTGCATTTCAGCTAAGTCAAATC 59.457 33.333 0.00 0.00 34.99 2.17
5785 6202 5.963176 TGCATTTCAGCTAAGTCAAATCA 57.037 34.783 0.00 0.00 34.99 2.57
5786 6203 6.330004 TGCATTTCAGCTAAGTCAAATCAA 57.670 33.333 0.00 0.00 34.99 2.57
5787 6204 6.927416 TGCATTTCAGCTAAGTCAAATCAAT 58.073 32.000 0.00 0.00 34.99 2.57
5788 6205 7.380536 TGCATTTCAGCTAAGTCAAATCAATT 58.619 30.769 0.00 0.00 34.99 2.32
5789 6206 7.329962 TGCATTTCAGCTAAGTCAAATCAATTG 59.670 33.333 0.00 0.00 36.50 2.32
5790 6207 7.672738 CATTTCAGCTAAGTCAAATCAATTGC 58.327 34.615 0.00 0.00 38.98 3.56
5791 6208 5.963176 TCAGCTAAGTCAAATCAATTGCA 57.037 34.783 0.00 0.00 38.98 4.08
5792 6209 5.702865 TCAGCTAAGTCAAATCAATTGCAC 58.297 37.500 0.00 0.00 38.98 4.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 2.601067 TAGTCCCGGCCGTTGACA 60.601 61.111 33.33 21.95 0.00 3.58
196 205 0.313672 GCACAATTTCCCAACGAGCA 59.686 50.000 0.00 0.00 0.00 4.26
239 249 3.088532 TCAACTGCCACAAAGTTTCAGT 58.911 40.909 2.65 2.65 39.42 3.41
241 251 3.698539 TCATCAACTGCCACAAAGTTTCA 59.301 39.130 0.00 0.00 35.70 2.69
257 267 5.105797 GCAGAATAACCCAACATGTCATCAA 60.106 40.000 0.00 0.00 0.00 2.57
271 281 8.128582 TCGACAATCATATTTTGCAGAATAACC 58.871 33.333 13.13 0.00 0.00 2.85
283 293 5.072329 ACCCTCATCCTCGACAATCATATTT 59.928 40.000 0.00 0.00 0.00 1.40
341 351 3.818773 GGGATTTCAACTTGTTCTTCGGA 59.181 43.478 0.00 0.00 0.00 4.55
368 378 0.755079 AGCTGAGCCGCATCTTGATA 59.245 50.000 0.00 0.00 0.00 2.15
398 408 5.422145 TCGAAGATTCTGATGCATCTGAAA 58.578 37.500 37.00 25.85 44.28 2.69
400 410 4.340381 TCTCGAAGATTCTGATGCATCTGA 59.660 41.667 26.87 26.87 33.89 3.27
482 492 0.681175 GCATTGCCTCCTTGGTTGTT 59.319 50.000 0.00 0.00 38.35 2.83
604 615 6.998074 TCGGACTCTTAAATCCATGCAAATAT 59.002 34.615 0.00 0.00 34.35 1.28
654 665 7.144000 GCATTGGACAATCCTTCATATTTCTC 58.856 38.462 0.00 0.00 37.46 2.87
668 679 1.184322 TTGTGGGCGCATTGGACAAT 61.184 50.000 10.83 0.00 0.00 2.71
669 680 1.395045 TTTGTGGGCGCATTGGACAA 61.395 50.000 10.83 7.27 0.00 3.18
670 681 1.829970 TTTGTGGGCGCATTGGACA 60.830 52.632 10.83 0.43 0.00 4.02
710 722 1.904287 CAAATCCGGACCCTCAAACA 58.096 50.000 6.12 0.00 0.00 2.83
731 745 3.028094 AGACCATCTAAAGCCGGACTA 57.972 47.619 5.05 0.00 0.00 2.59
741 755 5.450818 AATGGCCAAGTTAGACCATCTAA 57.549 39.130 10.96 0.00 42.06 2.10
748 762 2.159517 CGCTGAAATGGCCAAGTTAGAC 60.160 50.000 10.96 2.75 0.00 2.59
754 768 0.457337 GCTTCGCTGAAATGGCCAAG 60.457 55.000 10.96 2.94 32.56 3.61
757 771 0.457337 CTTGCTTCGCTGAAATGGCC 60.457 55.000 0.00 0.00 0.00 5.36
788 802 7.329962 CGTTTTGTTTTGTTTTCTTCCCTACTT 59.670 33.333 0.00 0.00 0.00 2.24
791 805 6.921914 TCGTTTTGTTTTGTTTTCTTCCCTA 58.078 32.000 0.00 0.00 0.00 3.53
795 809 6.147038 TGCTCGTTTTGTTTTGTTTTCTTC 57.853 33.333 0.00 0.00 0.00 2.87
812 826 2.742774 GGAAAAAGTGCATTTGCTCGT 58.257 42.857 3.94 0.00 42.66 4.18
843 858 1.002430 TGCTCCAGCTTTTGATCGACT 59.998 47.619 0.00 0.00 42.66 4.18
844 859 1.129437 GTGCTCCAGCTTTTGATCGAC 59.871 52.381 0.00 0.00 42.66 4.20
900 923 0.515127 TTGCCTTTCGTACATGTGCG 59.485 50.000 27.63 27.63 40.03 5.34
973 996 0.895100 TGAAATGGTGGTGGAGCTGC 60.895 55.000 0.00 0.00 0.00 5.25
984 1007 1.352352 CAGGGGAGAGTGTGAAATGGT 59.648 52.381 0.00 0.00 0.00 3.55
1208 1235 1.212751 GGCGAGGTTTGTTGATGCC 59.787 57.895 0.00 0.00 0.00 4.40
1212 1239 1.072505 GGGAGGCGAGGTTTGTTGA 59.927 57.895 0.00 0.00 0.00 3.18
1248 1275 2.821366 GACTGCTGCCATGACGGG 60.821 66.667 0.00 0.00 34.06 5.28
1302 1329 2.180769 GACGCGGGGAATTTTGGC 59.819 61.111 12.47 0.00 0.00 4.52
1916 1943 3.276857 CTCCACACAGATTGAATCAGGG 58.723 50.000 8.03 2.88 0.00 4.45
1962 1989 0.599728 TGCGCAAACCAAAGCAATCC 60.600 50.000 8.16 0.00 36.60 3.01
2046 2074 0.545548 ACAGTGGAAGAGGGTCCTCC 60.546 60.000 12.99 1.46 43.70 4.30
2048 2076 0.838122 CCACAGTGGAAGAGGGTCCT 60.838 60.000 15.35 0.00 40.96 3.85
2093 2121 7.494952 AGCAGATAAAACTACCCTAATTCGAAC 59.505 37.037 0.00 0.00 0.00 3.95
2130 2158 5.046014 AGGAAGGCCACATTAGAGCATATAG 60.046 44.000 5.01 0.00 36.29 1.31
2329 2378 5.179742 ACGCGAATACTGAACCAAAATGTAA 59.820 36.000 15.93 0.00 0.00 2.41
2334 2383 2.481185 GGACGCGAATACTGAACCAAAA 59.519 45.455 15.93 0.00 0.00 2.44
2349 2398 1.651987 ACACCAATGAATAGGACGCG 58.348 50.000 3.53 3.53 0.00 6.01
2352 2401 6.699575 AATGCTTACACCAATGAATAGGAC 57.300 37.500 0.00 0.00 0.00 3.85
2494 2544 4.649088 AAAAACCCTTACTGTTGAGCAC 57.351 40.909 0.00 0.00 0.00 4.40
2523 2694 4.801330 AACCATAGACTGTCGTGAATCA 57.199 40.909 14.88 0.00 0.00 2.57
2602 2775 6.205658 AGAGGTGCTTACTTTCTTGATGTTTC 59.794 38.462 0.00 0.00 0.00 2.78
2609 2782 7.099764 TCAGATAAGAGGTGCTTACTTTCTTG 58.900 38.462 0.00 0.00 41.64 3.02
2616 2789 5.584253 TCACTCAGATAAGAGGTGCTTAC 57.416 43.478 0.00 0.00 41.64 2.34
2681 2854 5.675538 AGCACTAACTGTCAATAAGATCCC 58.324 41.667 0.00 0.00 0.00 3.85
2787 2960 4.679106 CGGTGCAGATCAACAACTCTAGAT 60.679 45.833 0.00 0.00 31.06 1.98
2788 2961 3.367395 CGGTGCAGATCAACAACTCTAGA 60.367 47.826 0.00 0.00 31.06 2.43
2789 2962 2.926200 CGGTGCAGATCAACAACTCTAG 59.074 50.000 0.00 0.00 31.06 2.43
2790 2963 2.560981 TCGGTGCAGATCAACAACTCTA 59.439 45.455 0.00 0.00 31.06 2.43
2791 2964 1.344438 TCGGTGCAGATCAACAACTCT 59.656 47.619 0.00 0.00 31.06 3.24
2792 2965 1.795768 TCGGTGCAGATCAACAACTC 58.204 50.000 0.00 0.00 31.06 3.01
2793 2966 1.873591 GTTCGGTGCAGATCAACAACT 59.126 47.619 0.00 0.00 31.06 3.16
2879 3052 0.905337 GTAGGGCCAGTCCTGACAGT 60.905 60.000 6.18 0.00 37.75 3.55
2880 3053 0.904865 TGTAGGGCCAGTCCTGACAG 60.905 60.000 6.18 0.00 37.75 3.51
2881 3054 0.472925 TTGTAGGGCCAGTCCTGACA 60.473 55.000 6.18 0.00 37.75 3.58
2882 3055 0.690762 TTTGTAGGGCCAGTCCTGAC 59.309 55.000 6.18 0.00 37.75 3.51
2883 3056 1.668826 ATTTGTAGGGCCAGTCCTGA 58.331 50.000 6.18 0.00 37.75 3.86
2884 3057 2.505819 ACTATTTGTAGGGCCAGTCCTG 59.494 50.000 6.18 0.00 37.75 3.86
2885 3058 2.846950 ACTATTTGTAGGGCCAGTCCT 58.153 47.619 6.18 0.00 40.79 3.85
2886 3059 4.338379 CTACTATTTGTAGGGCCAGTCC 57.662 50.000 6.18 0.00 43.63 3.85
3213 3390 6.655003 CAGGTTCCTAACTTTATGCTCTGAAA 59.345 38.462 0.00 0.00 0.00 2.69
3220 3397 6.884280 ATATGCAGGTTCCTAACTTTATGC 57.116 37.500 0.00 0.00 0.00 3.14
3262 3439 8.398878 ACCTGTTATTAGATCTCTGCTACTAC 57.601 38.462 0.00 0.00 0.00 2.73
3263 3440 9.504708 GTACCTGTTATTAGATCTCTGCTACTA 57.495 37.037 0.00 0.00 0.00 1.82
3264 3441 8.221944 AGTACCTGTTATTAGATCTCTGCTACT 58.778 37.037 0.00 0.00 0.00 2.57
3313 3490 6.160576 ACAGCACATTTCATTAAACCTGTT 57.839 33.333 0.00 0.00 0.00 3.16
3402 3579 3.146066 GGGTCGATATTGCTGCCAATTA 58.854 45.455 0.00 0.00 41.68 1.40
3484 3661 6.473455 GCCAATTGCTATTTGCTAACAGTAAG 59.527 38.462 9.21 0.00 43.37 2.34
3496 3673 6.543430 TGGAAATAGTGCCAATTGCTATTT 57.457 33.333 20.42 20.42 43.74 1.40
3507 3684 6.765915 ATTCTTTCTCTTGGAAATAGTGCC 57.234 37.500 0.00 0.00 42.25 5.01
3557 3734 3.652274 CATTTTTGCTGTTCCGTGGAAT 58.348 40.909 4.36 0.00 36.45 3.01
3560 3737 1.139163 GCATTTTTGCTGTTCCGTGG 58.861 50.000 0.00 0.00 0.00 4.94
3646 3823 2.488153 GTTTGATTGTCACCAGGTAGGC 59.512 50.000 0.00 0.00 43.14 3.93
3676 3853 6.677913 ACAATTAATGTGCCACTACAACTTC 58.322 36.000 0.00 0.00 41.93 3.01
3814 3991 5.825151 AGACGGTCCTAGTAGTACCAATAAC 59.175 44.000 12.04 0.00 32.55 1.89
3913 4091 7.041721 ACTTCACTAATTTACAGATGCGATCA 58.958 34.615 0.00 0.00 0.00 2.92
4031 4209 1.912110 GCTACTAGACAACTTGACGCG 59.088 52.381 3.53 3.53 0.00 6.01
4058 4237 2.851195 TCTCAAAGAAGCACCTCAACC 58.149 47.619 0.00 0.00 0.00 3.77
4080 4259 4.216257 CACAAATCCGTCATTCAGGAAACT 59.784 41.667 0.00 0.00 46.44 2.66
4103 4282 3.795101 GCACATTGATAGCAGAATGTTGC 59.205 43.478 0.00 1.44 40.12 4.17
4228 4422 4.941263 TGCGAATCCTGCAAACTACTTAAT 59.059 37.500 0.00 0.00 39.87 1.40
4317 4594 6.010294 ACAAGTCAATCTCAGCAAAGAATG 57.990 37.500 0.00 0.00 0.00 2.67
4787 5064 4.537751 TCCTCAGAGGAATGTACAGTAGG 58.462 47.826 17.67 1.26 42.51 3.18
4847 5124 6.552445 ATGTAGAACAACTATCTGAGGCTT 57.448 37.500 0.00 0.00 33.39 4.35
4958 5242 0.698238 ATCAAGCACTGGGGCAACTA 59.302 50.000 0.00 0.00 35.83 2.24
4994 5278 2.871022 GCATGTGGAGCAACTATCAGAG 59.129 50.000 0.00 0.00 0.00 3.35
5133 5548 9.367444 GAATGAATCTTGAAATTTCTTCTGCAT 57.633 29.630 18.64 11.79 0.00 3.96
5141 5556 6.939622 ACTGGGGAATGAATCTTGAAATTTC 58.060 36.000 11.41 11.41 0.00 2.17
5145 5560 6.659242 GTCTTACTGGGGAATGAATCTTGAAA 59.341 38.462 0.00 0.00 0.00 2.69
5157 5574 2.787035 AGGTTTTGGTCTTACTGGGGAA 59.213 45.455 0.00 0.00 0.00 3.97
5168 5585 3.828921 ACCCTTCTGTTAGGTTTTGGTC 58.171 45.455 0.00 0.00 33.17 4.02
5178 5595 7.179966 TGTAGAAGAGATGTACCCTTCTGTTA 58.820 38.462 18.81 8.61 44.30 2.41
5190 5607 4.867047 CGTTGCAATCTGTAGAAGAGATGT 59.133 41.667 0.59 0.00 38.67 3.06
5234 5651 6.477688 ACATTTGAGTTGTTGCTGAAATTCAG 59.522 34.615 18.02 18.02 46.90 3.02
5237 5654 6.817641 TGAACATTTGAGTTGTTGCTGAAATT 59.182 30.769 0.00 0.00 37.43 1.82
5254 5671 6.154877 TGCAATGGATCCAGTATTGAACATTT 59.845 34.615 24.50 6.83 34.55 2.32
5325 5742 9.968743 GCTGTGACTGTACATTTAAGTTATAAC 57.031 33.333 7.57 7.57 0.00 1.89
5334 5751 6.584185 TCTACTGCTGTGACTGTACATTTA 57.416 37.500 6.48 0.00 0.00 1.40
5347 5764 4.647611 AGATCGTATAGCTCTACTGCTGT 58.352 43.478 7.57 0.66 43.87 4.40
5413 5830 8.195617 TGTGTTGAATCTGGTTTTGATTTTTC 57.804 30.769 0.00 0.00 34.67 2.29
5441 5858 4.342092 CCTGAAATCCTGACCAAGTGTTTT 59.658 41.667 0.00 0.00 0.00 2.43
5444 5861 2.711009 TCCTGAAATCCTGACCAAGTGT 59.289 45.455 0.00 0.00 0.00 3.55
5483 5900 5.049474 TGCTGTGTTGAATCTGTGTTGATAC 60.049 40.000 0.00 0.00 0.00 2.24
5484 5901 5.062528 TGCTGTGTTGAATCTGTGTTGATA 58.937 37.500 0.00 0.00 0.00 2.15
5485 5902 3.884693 TGCTGTGTTGAATCTGTGTTGAT 59.115 39.130 0.00 0.00 0.00 2.57
5486 5903 3.277715 TGCTGTGTTGAATCTGTGTTGA 58.722 40.909 0.00 0.00 0.00 3.18
5487 5904 3.696281 TGCTGTGTTGAATCTGTGTTG 57.304 42.857 0.00 0.00 0.00 3.33
5488 5905 4.717233 TTTGCTGTGTTGAATCTGTGTT 57.283 36.364 0.00 0.00 0.00 3.32
5489 5906 4.082300 TGTTTTGCTGTGTTGAATCTGTGT 60.082 37.500 0.00 0.00 0.00 3.72
5490 5907 4.266029 GTGTTTTGCTGTGTTGAATCTGTG 59.734 41.667 0.00 0.00 0.00 3.66
5491 5908 4.158394 AGTGTTTTGCTGTGTTGAATCTGT 59.842 37.500 0.00 0.00 0.00 3.41
5492 5909 4.675510 AGTGTTTTGCTGTGTTGAATCTG 58.324 39.130 0.00 0.00 0.00 2.90
5493 5910 4.989279 AGTGTTTTGCTGTGTTGAATCT 57.011 36.364 0.00 0.00 0.00 2.40
5494 5911 4.268405 CCAAGTGTTTTGCTGTGTTGAATC 59.732 41.667 0.00 0.00 0.00 2.52
5495 5912 4.183101 CCAAGTGTTTTGCTGTGTTGAAT 58.817 39.130 0.00 0.00 0.00 2.57
5496 5913 3.006323 ACCAAGTGTTTTGCTGTGTTGAA 59.994 39.130 0.00 0.00 0.00 2.69
5497 5914 2.560542 ACCAAGTGTTTTGCTGTGTTGA 59.439 40.909 0.00 0.00 0.00 3.18
5498 5915 2.923020 GACCAAGTGTTTTGCTGTGTTG 59.077 45.455 0.00 0.00 0.00 3.33
5499 5916 2.560542 TGACCAAGTGTTTTGCTGTGTT 59.439 40.909 0.00 0.00 0.00 3.32
5500 5917 2.164219 CTGACCAAGTGTTTTGCTGTGT 59.836 45.455 0.00 0.00 0.00 3.72
5501 5918 2.480073 CCTGACCAAGTGTTTTGCTGTG 60.480 50.000 0.00 0.00 0.00 3.66
5502 5919 1.750778 CCTGACCAAGTGTTTTGCTGT 59.249 47.619 0.00 0.00 0.00 4.40
5503 5920 2.023673 TCCTGACCAAGTGTTTTGCTG 58.976 47.619 0.00 0.00 0.00 4.41
5504 5921 2.435372 TCCTGACCAAGTGTTTTGCT 57.565 45.000 0.00 0.00 0.00 3.91
5505 5922 3.733443 AATCCTGACCAAGTGTTTTGC 57.267 42.857 0.00 0.00 0.00 3.68
5506 5923 5.261209 TGAAATCCTGACCAAGTGTTTTG 57.739 39.130 0.00 0.00 0.00 2.44
5507 5924 4.342092 CCTGAAATCCTGACCAAGTGTTTT 59.658 41.667 0.00 0.00 0.00 2.43
5508 5925 3.891366 CCTGAAATCCTGACCAAGTGTTT 59.109 43.478 0.00 0.00 0.00 2.83
5509 5926 3.138283 TCCTGAAATCCTGACCAAGTGTT 59.862 43.478 0.00 0.00 0.00 3.32
5510 5927 2.711009 TCCTGAAATCCTGACCAAGTGT 59.289 45.455 0.00 0.00 0.00 3.55
5511 5928 3.423539 TCCTGAAATCCTGACCAAGTG 57.576 47.619 0.00 0.00 0.00 3.16
5512 5929 4.664688 ATTCCTGAAATCCTGACCAAGT 57.335 40.909 0.00 0.00 0.00 3.16
5513 5930 5.128919 CCTATTCCTGAAATCCTGACCAAG 58.871 45.833 0.00 0.00 0.00 3.61
5514 5931 4.540099 ACCTATTCCTGAAATCCTGACCAA 59.460 41.667 0.00 0.00 0.00 3.67
5515 5932 4.111577 ACCTATTCCTGAAATCCTGACCA 58.888 43.478 0.00 0.00 0.00 4.02
5516 5933 4.779993 ACCTATTCCTGAAATCCTGACC 57.220 45.455 0.00 0.00 0.00 4.02
5517 5934 7.309770 AGATACCTATTCCTGAAATCCTGAC 57.690 40.000 0.00 0.00 0.00 3.51
5518 5935 7.690301 GCAAGATACCTATTCCTGAAATCCTGA 60.690 40.741 0.00 0.00 0.00 3.86
5519 5936 6.429385 GCAAGATACCTATTCCTGAAATCCTG 59.571 42.308 0.00 0.00 0.00 3.86
5520 5937 6.538263 GCAAGATACCTATTCCTGAAATCCT 58.462 40.000 0.00 0.00 0.00 3.24
5521 5938 5.409826 CGCAAGATACCTATTCCTGAAATCC 59.590 44.000 0.00 0.00 43.02 3.01
5522 5939 5.992217 ACGCAAGATACCTATTCCTGAAATC 59.008 40.000 0.00 0.00 43.62 2.17
5523 5940 5.930135 ACGCAAGATACCTATTCCTGAAAT 58.070 37.500 0.00 0.00 43.62 2.17
5524 5941 5.128827 AGACGCAAGATACCTATTCCTGAAA 59.871 40.000 0.00 0.00 43.62 2.69
5525 5942 4.649674 AGACGCAAGATACCTATTCCTGAA 59.350 41.667 0.00 0.00 43.62 3.02
5526 5943 4.038042 CAGACGCAAGATACCTATTCCTGA 59.962 45.833 0.00 0.00 43.62 3.86
5527 5944 4.202161 ACAGACGCAAGATACCTATTCCTG 60.202 45.833 0.00 0.00 43.62 3.86
5528 5945 3.961408 ACAGACGCAAGATACCTATTCCT 59.039 43.478 0.00 0.00 43.62 3.36
5529 5946 4.323553 ACAGACGCAAGATACCTATTCC 57.676 45.455 0.00 0.00 43.62 3.01
5530 5947 6.678878 TGATACAGACGCAAGATACCTATTC 58.321 40.000 0.00 0.00 43.62 1.75
5531 5948 6.650427 TGATACAGACGCAAGATACCTATT 57.350 37.500 0.00 0.00 43.62 1.73
5532 5949 6.040504 TGTTGATACAGACGCAAGATACCTAT 59.959 38.462 0.00 0.00 43.62 2.57
5533 5950 5.358725 TGTTGATACAGACGCAAGATACCTA 59.641 40.000 0.00 0.00 43.62 3.08
5534 5951 4.159693 TGTTGATACAGACGCAAGATACCT 59.840 41.667 0.00 0.00 43.62 3.08
5535 5952 4.267928 GTGTTGATACAGACGCAAGATACC 59.732 45.833 0.00 0.00 36.19 2.73
5536 5953 4.862574 TGTGTTGATACAGACGCAAGATAC 59.137 41.667 0.00 0.00 36.19 2.24
5537 5954 5.066968 TGTGTTGATACAGACGCAAGATA 57.933 39.130 0.00 0.00 36.19 1.98
5538 5955 3.925379 TGTGTTGATACAGACGCAAGAT 58.075 40.909 0.00 0.00 36.19 2.40
5539 5956 3.378911 TGTGTTGATACAGACGCAAGA 57.621 42.857 0.00 0.00 36.19 3.02
5548 5965 5.049474 GCTGTGTTGAATCTGTGTTGATACA 60.049 40.000 0.00 0.00 0.00 2.29
5549 5966 5.049474 TGCTGTGTTGAATCTGTGTTGATAC 60.049 40.000 0.00 0.00 0.00 2.24
5550 5967 5.062528 TGCTGTGTTGAATCTGTGTTGATA 58.937 37.500 0.00 0.00 0.00 2.15
5551 5968 3.884693 TGCTGTGTTGAATCTGTGTTGAT 59.115 39.130 0.00 0.00 0.00 2.57
5552 5969 3.277715 TGCTGTGTTGAATCTGTGTTGA 58.722 40.909 0.00 0.00 0.00 3.18
5553 5970 3.696281 TGCTGTGTTGAATCTGTGTTG 57.304 42.857 0.00 0.00 0.00 3.33
5554 5971 4.717233 TTTGCTGTGTTGAATCTGTGTT 57.283 36.364 0.00 0.00 0.00 3.32
5555 5972 4.082300 TGTTTTGCTGTGTTGAATCTGTGT 60.082 37.500 0.00 0.00 0.00 3.72
5556 5973 4.266029 GTGTTTTGCTGTGTTGAATCTGTG 59.734 41.667 0.00 0.00 0.00 3.66
5557 5974 4.158394 AGTGTTTTGCTGTGTTGAATCTGT 59.842 37.500 0.00 0.00 0.00 3.41
5558 5975 4.675510 AGTGTTTTGCTGTGTTGAATCTG 58.324 39.130 0.00 0.00 0.00 2.90
5559 5976 4.989279 AGTGTTTTGCTGTGTTGAATCT 57.011 36.364 0.00 0.00 0.00 2.40
5560 5977 4.268405 CCAAGTGTTTTGCTGTGTTGAATC 59.732 41.667 0.00 0.00 0.00 2.52
5561 5978 4.183101 CCAAGTGTTTTGCTGTGTTGAAT 58.817 39.130 0.00 0.00 0.00 2.57
5562 5979 3.006323 ACCAAGTGTTTTGCTGTGTTGAA 59.994 39.130 0.00 0.00 0.00 2.69
5563 5980 2.560542 ACCAAGTGTTTTGCTGTGTTGA 59.439 40.909 0.00 0.00 0.00 3.18
5564 5981 2.923020 GACCAAGTGTTTTGCTGTGTTG 59.077 45.455 0.00 0.00 0.00 3.33
5565 5982 2.560542 TGACCAAGTGTTTTGCTGTGTT 59.439 40.909 0.00 0.00 0.00 3.32
5566 5983 2.164219 CTGACCAAGTGTTTTGCTGTGT 59.836 45.455 0.00 0.00 0.00 3.72
5567 5984 2.480073 CCTGACCAAGTGTTTTGCTGTG 60.480 50.000 0.00 0.00 0.00 3.66
5568 5985 1.750778 CCTGACCAAGTGTTTTGCTGT 59.249 47.619 0.00 0.00 0.00 4.40
5569 5986 2.023673 TCCTGACCAAGTGTTTTGCTG 58.976 47.619 0.00 0.00 0.00 4.41
5570 5987 2.435372 TCCTGACCAAGTGTTTTGCT 57.565 45.000 0.00 0.00 0.00 3.91
5571 5988 3.733443 AATCCTGACCAAGTGTTTTGC 57.267 42.857 0.00 0.00 0.00 3.68
5572 5989 6.805713 ACTAAAATCCTGACCAAGTGTTTTG 58.194 36.000 0.00 0.00 0.00 2.44
5573 5990 7.418337 AACTAAAATCCTGACCAAGTGTTTT 57.582 32.000 0.00 0.00 0.00 2.43
5574 5991 7.123547 TGAAACTAAAATCCTGACCAAGTGTTT 59.876 33.333 0.00 0.00 0.00 2.83
5575 5992 6.605594 TGAAACTAAAATCCTGACCAAGTGTT 59.394 34.615 0.00 0.00 0.00 3.32
5576 5993 6.039382 GTGAAACTAAAATCCTGACCAAGTGT 59.961 38.462 0.00 0.00 0.00 3.55
5577 5994 6.039270 TGTGAAACTAAAATCCTGACCAAGTG 59.961 38.462 0.00 0.00 38.04 3.16
5578 5995 6.126409 TGTGAAACTAAAATCCTGACCAAGT 58.874 36.000 0.00 0.00 38.04 3.16
5579 5996 6.633500 TGTGAAACTAAAATCCTGACCAAG 57.367 37.500 0.00 0.00 38.04 3.61
5580 5997 8.877864 ATATGTGAAACTAAAATCCTGACCAA 57.122 30.769 0.00 0.00 38.04 3.67
5581 5998 8.877864 AATATGTGAAACTAAAATCCTGACCA 57.122 30.769 0.00 0.00 38.04 4.02
5603 6020 8.429641 GGGAGTGGTATGAATTCTCTGTAAATA 58.570 37.037 7.05 0.00 0.00 1.40
5604 6021 7.092444 TGGGAGTGGTATGAATTCTCTGTAAAT 60.092 37.037 7.05 0.00 0.00 1.40
5605 6022 6.214615 TGGGAGTGGTATGAATTCTCTGTAAA 59.785 38.462 7.05 0.00 0.00 2.01
5606 6023 5.724370 TGGGAGTGGTATGAATTCTCTGTAA 59.276 40.000 7.05 0.00 0.00 2.41
5607 6024 5.277250 TGGGAGTGGTATGAATTCTCTGTA 58.723 41.667 7.05 0.00 0.00 2.74
5608 6025 4.104086 TGGGAGTGGTATGAATTCTCTGT 58.896 43.478 7.05 0.00 0.00 3.41
5609 6026 4.760530 TGGGAGTGGTATGAATTCTCTG 57.239 45.455 7.05 0.00 0.00 3.35
5610 6027 4.536090 TGTTGGGAGTGGTATGAATTCTCT 59.464 41.667 7.05 0.00 0.00 3.10
5611 6028 4.843728 TGTTGGGAGTGGTATGAATTCTC 58.156 43.478 7.05 0.00 0.00 2.87
5612 6029 4.927267 TGTTGGGAGTGGTATGAATTCT 57.073 40.909 7.05 0.00 0.00 2.40
5613 6030 5.652014 TCATTGTTGGGAGTGGTATGAATTC 59.348 40.000 0.00 0.00 0.00 2.17
5614 6031 5.579047 TCATTGTTGGGAGTGGTATGAATT 58.421 37.500 0.00 0.00 0.00 2.17
5615 6032 5.191727 TCATTGTTGGGAGTGGTATGAAT 57.808 39.130 0.00 0.00 0.00 2.57
5616 6033 4.649267 TCATTGTTGGGAGTGGTATGAA 57.351 40.909 0.00 0.00 0.00 2.57
5617 6034 4.649267 TTCATTGTTGGGAGTGGTATGA 57.351 40.909 0.00 0.00 0.00 2.15
5618 6035 4.339247 GGATTCATTGTTGGGAGTGGTATG 59.661 45.833 0.00 0.00 0.00 2.39
5619 6036 4.230502 AGGATTCATTGTTGGGAGTGGTAT 59.769 41.667 0.00 0.00 0.00 2.73
5620 6037 3.591527 AGGATTCATTGTTGGGAGTGGTA 59.408 43.478 0.00 0.00 0.00 3.25
5621 6038 2.379907 AGGATTCATTGTTGGGAGTGGT 59.620 45.455 0.00 0.00 0.00 4.16
5622 6039 3.019564 GAGGATTCATTGTTGGGAGTGG 58.980 50.000 0.00 0.00 0.00 4.00
5623 6040 3.693085 CAGAGGATTCATTGTTGGGAGTG 59.307 47.826 0.00 0.00 0.00 3.51
5624 6041 3.875369 GCAGAGGATTCATTGTTGGGAGT 60.875 47.826 0.00 0.00 0.00 3.85
5625 6042 2.686915 GCAGAGGATTCATTGTTGGGAG 59.313 50.000 0.00 0.00 0.00 4.30
5626 6043 2.041485 TGCAGAGGATTCATTGTTGGGA 59.959 45.455 0.00 0.00 0.00 4.37
5627 6044 2.449464 TGCAGAGGATTCATTGTTGGG 58.551 47.619 0.00 0.00 0.00 4.12
5628 6045 3.952323 AGATGCAGAGGATTCATTGTTGG 59.048 43.478 0.00 0.00 0.00 3.77
5629 6046 4.398358 ACAGATGCAGAGGATTCATTGTTG 59.602 41.667 0.00 0.00 0.00 3.33
5630 6047 4.597004 ACAGATGCAGAGGATTCATTGTT 58.403 39.130 0.00 0.00 0.00 2.83
5631 6048 4.232188 ACAGATGCAGAGGATTCATTGT 57.768 40.909 0.00 0.00 0.00 2.71
5632 6049 5.608449 TCTACAGATGCAGAGGATTCATTG 58.392 41.667 0.00 0.00 0.00 2.82
5633 6050 5.883685 TCTACAGATGCAGAGGATTCATT 57.116 39.130 0.00 0.00 0.00 2.57
5634 6051 5.781306 AGATCTACAGATGCAGAGGATTCAT 59.219 40.000 0.00 0.00 34.37 2.57
5635 6052 5.010820 CAGATCTACAGATGCAGAGGATTCA 59.989 44.000 0.00 0.00 34.37 2.57
5636 6053 5.472148 CAGATCTACAGATGCAGAGGATTC 58.528 45.833 0.00 0.00 34.37 2.52
5637 6054 4.262549 GCAGATCTACAGATGCAGAGGATT 60.263 45.833 0.00 0.00 34.37 3.01
5638 6055 3.258872 GCAGATCTACAGATGCAGAGGAT 59.741 47.826 0.00 0.00 34.37 3.24
5639 6056 2.627221 GCAGATCTACAGATGCAGAGGA 59.373 50.000 0.00 0.00 34.37 3.71
5640 6057 2.364647 TGCAGATCTACAGATGCAGAGG 59.635 50.000 0.00 0.00 34.37 3.69
5641 6058 3.181478 TGTGCAGATCTACAGATGCAGAG 60.181 47.826 7.57 0.00 35.17 3.35
5642 6059 2.762327 TGTGCAGATCTACAGATGCAGA 59.238 45.455 7.57 4.59 35.17 4.26
5643 6060 3.124560 CTGTGCAGATCTACAGATGCAG 58.875 50.000 17.40 8.03 45.46 4.41
5644 6061 2.762327 TCTGTGCAGATCTACAGATGCA 59.238 45.455 19.93 11.65 45.97 3.96
5645 6062 3.449528 TCTGTGCAGATCTACAGATGC 57.550 47.619 19.93 9.35 45.97 3.91
5649 6066 6.791887 TTTTCTTTCTGTGCAGATCTACAG 57.208 37.500 16.52 16.52 44.31 2.74
5650 6067 6.017109 GGTTTTTCTTTCTGTGCAGATCTACA 60.017 38.462 2.47 0.00 37.29 2.74
5651 6068 6.017109 TGGTTTTTCTTTCTGTGCAGATCTAC 60.017 38.462 2.47 0.00 37.29 2.59
5652 6069 6.061441 TGGTTTTTCTTTCTGTGCAGATCTA 58.939 36.000 2.47 0.00 37.29 1.98
5653 6070 4.889409 TGGTTTTTCTTTCTGTGCAGATCT 59.111 37.500 2.47 0.00 37.29 2.75
5654 6071 5.186996 TGGTTTTTCTTTCTGTGCAGATC 57.813 39.130 2.47 0.00 37.29 2.75
5655 6072 5.360714 TCTTGGTTTTTCTTTCTGTGCAGAT 59.639 36.000 2.47 0.00 37.29 2.90
5656 6073 4.704540 TCTTGGTTTTTCTTTCTGTGCAGA 59.295 37.500 0.00 0.00 35.27 4.26
5657 6074 4.997565 TCTTGGTTTTTCTTTCTGTGCAG 58.002 39.130 0.00 0.00 0.00 4.41
5658 6075 5.596836 ATCTTGGTTTTTCTTTCTGTGCA 57.403 34.783 0.00 0.00 0.00 4.57
5659 6076 5.173854 CGAATCTTGGTTTTTCTTTCTGTGC 59.826 40.000 0.00 0.00 0.00 4.57
5660 6077 6.265577 ACGAATCTTGGTTTTTCTTTCTGTG 58.734 36.000 0.00 0.00 0.00 3.66
5661 6078 6.451064 ACGAATCTTGGTTTTTCTTTCTGT 57.549 33.333 0.00 0.00 0.00 3.41
5662 6079 6.417930 GGAACGAATCTTGGTTTTTCTTTCTG 59.582 38.462 0.00 0.00 31.80 3.02
5663 6080 6.461092 GGGAACGAATCTTGGTTTTTCTTTCT 60.461 38.462 0.00 0.00 31.80 2.52
5664 6081 5.690409 GGGAACGAATCTTGGTTTTTCTTTC 59.310 40.000 0.00 0.00 30.88 2.62
5665 6082 5.452776 GGGGAACGAATCTTGGTTTTTCTTT 60.453 40.000 0.00 0.00 0.00 2.52
5666 6083 4.038763 GGGGAACGAATCTTGGTTTTTCTT 59.961 41.667 0.00 0.00 0.00 2.52
5667 6084 3.572682 GGGGAACGAATCTTGGTTTTTCT 59.427 43.478 0.00 0.00 0.00 2.52
5668 6085 3.319689 TGGGGAACGAATCTTGGTTTTTC 59.680 43.478 0.00 0.00 0.00 2.29
5669 6086 3.301274 TGGGGAACGAATCTTGGTTTTT 58.699 40.909 0.00 0.00 0.00 1.94
5670 6087 2.890945 CTGGGGAACGAATCTTGGTTTT 59.109 45.455 0.00 0.00 0.00 2.43
5671 6088 2.158519 ACTGGGGAACGAATCTTGGTTT 60.159 45.455 0.00 0.00 0.00 3.27
5672 6089 1.423921 ACTGGGGAACGAATCTTGGTT 59.576 47.619 0.00 0.00 0.00 3.67
5673 6090 1.064825 ACTGGGGAACGAATCTTGGT 58.935 50.000 0.00 0.00 0.00 3.67
5674 6091 1.003118 TCACTGGGGAACGAATCTTGG 59.997 52.381 0.00 0.00 0.00 3.61
5675 6092 2.472695 TCACTGGGGAACGAATCTTG 57.527 50.000 0.00 0.00 0.00 3.02
5676 6093 3.146847 GTTTCACTGGGGAACGAATCTT 58.853 45.455 0.00 0.00 0.00 2.40
5677 6094 2.552373 GGTTTCACTGGGGAACGAATCT 60.552 50.000 0.00 0.00 0.00 2.40
5678 6095 1.810755 GGTTTCACTGGGGAACGAATC 59.189 52.381 0.00 0.00 0.00 2.52
5679 6096 1.880646 CGGTTTCACTGGGGAACGAAT 60.881 52.381 0.00 0.00 0.00 3.34
5680 6097 0.533308 CGGTTTCACTGGGGAACGAA 60.533 55.000 0.00 0.00 0.00 3.85
5681 6098 1.070105 CGGTTTCACTGGGGAACGA 59.930 57.895 0.00 0.00 0.00 3.85
5682 6099 0.533308 TTCGGTTTCACTGGGGAACG 60.533 55.000 0.00 0.00 0.00 3.95
5683 6100 0.949397 GTTCGGTTTCACTGGGGAAC 59.051 55.000 0.00 0.00 0.00 3.62
5684 6101 0.841289 AGTTCGGTTTCACTGGGGAA 59.159 50.000 0.00 0.00 0.00 3.97
5685 6102 1.719529 TAGTTCGGTTTCACTGGGGA 58.280 50.000 0.00 0.00 0.00 4.81
5686 6103 2.554370 TTAGTTCGGTTTCACTGGGG 57.446 50.000 0.00 0.00 0.00 4.96
5687 6104 4.069304 TGATTTAGTTCGGTTTCACTGGG 58.931 43.478 0.00 0.00 0.00 4.45
5688 6105 5.682943 TTGATTTAGTTCGGTTTCACTGG 57.317 39.130 0.00 0.00 0.00 4.00
5689 6106 6.636850 CCTTTTGATTTAGTTCGGTTTCACTG 59.363 38.462 0.00 0.00 0.00 3.66
5690 6107 6.544564 TCCTTTTGATTTAGTTCGGTTTCACT 59.455 34.615 0.00 0.00 0.00 3.41
5691 6108 6.731164 TCCTTTTGATTTAGTTCGGTTTCAC 58.269 36.000 0.00 0.00 0.00 3.18
5692 6109 6.945938 TCCTTTTGATTTAGTTCGGTTTCA 57.054 33.333 0.00 0.00 0.00 2.69
5693 6110 6.308041 GCATCCTTTTGATTTAGTTCGGTTTC 59.692 38.462 0.00 0.00 0.00 2.78
5694 6111 6.156519 GCATCCTTTTGATTTAGTTCGGTTT 58.843 36.000 0.00 0.00 0.00 3.27
5695 6112 5.242838 TGCATCCTTTTGATTTAGTTCGGTT 59.757 36.000 0.00 0.00 0.00 4.44
5696 6113 4.764823 TGCATCCTTTTGATTTAGTTCGGT 59.235 37.500 0.00 0.00 0.00 4.69
5697 6114 5.309323 TGCATCCTTTTGATTTAGTTCGG 57.691 39.130 0.00 0.00 0.00 4.30
5698 6115 6.789262 AGATGCATCCTTTTGATTTAGTTCG 58.211 36.000 23.06 0.00 0.00 3.95
5699 6116 7.994194 AGAGATGCATCCTTTTGATTTAGTTC 58.006 34.615 23.06 8.68 0.00 3.01
5700 6117 7.951347 AGAGATGCATCCTTTTGATTTAGTT 57.049 32.000 23.06 0.00 0.00 2.24
5701 6118 7.833183 AGAAGAGATGCATCCTTTTGATTTAGT 59.167 33.333 23.06 0.00 0.00 2.24
5702 6119 8.129840 CAGAAGAGATGCATCCTTTTGATTTAG 58.870 37.037 26.74 11.39 29.26 1.85
5703 6120 7.415989 GCAGAAGAGATGCATCCTTTTGATTTA 60.416 37.037 30.74 0.00 43.31 1.40
5704 6121 6.627508 GCAGAAGAGATGCATCCTTTTGATTT 60.628 38.462 30.74 13.25 43.31 2.17
5705 6122 5.163540 GCAGAAGAGATGCATCCTTTTGATT 60.164 40.000 30.74 16.55 43.31 2.57
5706 6123 4.338682 GCAGAAGAGATGCATCCTTTTGAT 59.661 41.667 30.74 14.38 43.31 2.57
5707 6124 3.693085 GCAGAAGAGATGCATCCTTTTGA 59.307 43.478 30.74 0.00 43.31 2.69
5708 6125 4.030134 GCAGAAGAGATGCATCCTTTTG 57.970 45.455 26.61 26.61 43.31 2.44
5717 6134 2.759538 GCAATCTGCAGAAGAGATGC 57.240 50.000 22.50 20.30 44.26 3.91
5728 6145 4.921470 TTTACTACTCGTTGCAATCTGC 57.079 40.909 0.59 0.00 45.29 4.26
5729 6146 5.288712 ACGATTTACTACTCGTTGCAATCTG 59.711 40.000 0.59 0.00 45.15 2.90
5730 6147 5.408356 ACGATTTACTACTCGTTGCAATCT 58.592 37.500 0.59 0.00 45.15 2.40
5731 6148 5.697848 ACGATTTACTACTCGTTGCAATC 57.302 39.130 0.59 0.00 45.15 2.67
5739 6156 7.370836 GCAATTGAATGAACGATTTACTACTCG 59.629 37.037 10.34 0.00 40.62 4.18
5740 6157 8.175069 TGCAATTGAATGAACGATTTACTACTC 58.825 33.333 10.34 0.00 0.00 2.59
5741 6158 8.039603 TGCAATTGAATGAACGATTTACTACT 57.960 30.769 10.34 0.00 0.00 2.57
5742 6159 8.841444 ATGCAATTGAATGAACGATTTACTAC 57.159 30.769 10.34 0.00 0.00 2.73
5743 6160 9.853555 AAATGCAATTGAATGAACGATTTACTA 57.146 25.926 10.34 0.00 36.10 1.82
5744 6161 8.761575 AAATGCAATTGAATGAACGATTTACT 57.238 26.923 10.34 0.00 36.10 2.24
5745 6162 8.646356 TGAAATGCAATTGAATGAACGATTTAC 58.354 29.630 10.34 0.00 36.10 2.01
5746 6163 8.754230 TGAAATGCAATTGAATGAACGATTTA 57.246 26.923 10.34 0.00 36.10 1.40
5747 6164 7.622672 GCTGAAATGCAATTGAATGAACGATTT 60.623 33.333 10.34 0.00 36.10 2.17
5748 6165 6.183360 GCTGAAATGCAATTGAATGAACGATT 60.183 34.615 10.34 0.00 36.10 3.34
5749 6166 5.290158 GCTGAAATGCAATTGAATGAACGAT 59.710 36.000 10.34 0.00 36.10 3.73
5750 6167 4.622313 GCTGAAATGCAATTGAATGAACGA 59.378 37.500 10.34 0.00 36.10 3.85
5751 6168 4.624024 AGCTGAAATGCAATTGAATGAACG 59.376 37.500 10.34 0.00 36.10 3.95
5752 6169 7.330208 ACTTAGCTGAAATGCAATTGAATGAAC 59.670 33.333 10.34 0.45 36.10 3.18
5753 6170 7.380536 ACTTAGCTGAAATGCAATTGAATGAA 58.619 30.769 10.34 0.00 36.10 2.57
5754 6171 6.927416 ACTTAGCTGAAATGCAATTGAATGA 58.073 32.000 10.34 0.00 36.10 2.57
5755 6172 6.809689 TGACTTAGCTGAAATGCAATTGAATG 59.190 34.615 10.34 0.00 36.10 2.67
5756 6173 6.927416 TGACTTAGCTGAAATGCAATTGAAT 58.073 32.000 10.34 0.00 36.10 2.57
5757 6174 6.330004 TGACTTAGCTGAAATGCAATTGAA 57.670 33.333 10.34 0.00 36.10 2.69
5758 6175 5.963176 TGACTTAGCTGAAATGCAATTGA 57.037 34.783 10.34 0.00 36.10 2.57
5759 6176 7.329962 TGATTTGACTTAGCTGAAATGCAATTG 59.670 33.333 0.00 0.00 36.10 2.32
5760 6177 7.380536 TGATTTGACTTAGCTGAAATGCAATT 58.619 30.769 0.00 0.00 38.98 2.32
5761 6178 6.927416 TGATTTGACTTAGCTGAAATGCAAT 58.073 32.000 0.00 0.00 34.99 3.56
5762 6179 6.330004 TGATTTGACTTAGCTGAAATGCAA 57.670 33.333 0.00 0.00 34.99 4.08
5763 6180 5.963176 TGATTTGACTTAGCTGAAATGCA 57.037 34.783 0.00 0.00 34.99 3.96
5764 6181 7.672738 CAATTGATTTGACTTAGCTGAAATGC 58.327 34.615 0.00 0.00 37.53 3.56
5765 6182 7.329962 TGCAATTGATTTGACTTAGCTGAAATG 59.670 33.333 10.34 0.00 37.53 2.32
5766 6183 7.330208 GTGCAATTGATTTGACTTAGCTGAAAT 59.670 33.333 10.34 0.00 37.53 2.17
5767 6184 6.642131 GTGCAATTGATTTGACTTAGCTGAAA 59.358 34.615 10.34 0.00 37.53 2.69
5768 6185 6.151691 GTGCAATTGATTTGACTTAGCTGAA 58.848 36.000 10.34 0.00 37.53 3.02
5769 6186 5.702865 GTGCAATTGATTTGACTTAGCTGA 58.297 37.500 10.34 0.00 37.53 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.