Multiple sequence alignment - TraesCS2D01G387800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G387800 chr2D 100.000 5168 0 0 1 5168 493178322 493173155 0.000000e+00 9544.0
1 TraesCS2D01G387800 chr2D 90.580 828 58 12 2096 2915 245572941 245572126 0.000000e+00 1079.0
2 TraesCS2D01G387800 chr2D 85.526 304 36 7 4867 5165 469999268 469998968 1.400000e-80 311.0
3 TraesCS2D01G387800 chr2D 85.135 296 40 4 1180 1474 493082071 493081779 3.020000e-77 300.0
4 TraesCS2D01G387800 chr2B 90.065 4751 197 111 1 4666 581472274 581467714 0.000000e+00 5904.0
5 TraesCS2D01G387800 chr2B 86.792 212 28 0 1263 1474 579690420 579690209 2.410000e-58 237.0
6 TraesCS2D01G387800 chr2A 91.172 3908 178 77 726 4578 640269475 640273270 0.000000e+00 5151.0
7 TraesCS2D01G387800 chr2A 90.499 821 61 12 2099 2915 424538352 424537545 0.000000e+00 1068.0
8 TraesCS2D01G387800 chr2A 89.709 826 67 9 2096 2915 302436509 302437322 0.000000e+00 1038.0
9 TraesCS2D01G387800 chr2A 85.343 539 35 16 132 651 640268922 640269435 7.670000e-143 518.0
10 TraesCS2D01G387800 chr2A 84.300 293 42 4 1180 1471 640706564 640706853 3.050000e-72 283.0
11 TraesCS2D01G387800 chr2A 87.975 158 14 3 1829 1986 424538501 424538349 1.140000e-41 182.0
12 TraesCS2D01G387800 chr2A 82.682 179 14 8 2881 3059 348628145 348627984 5.390000e-30 143.0
13 TraesCS2D01G387800 chr5A 88.862 826 71 12 2096 2915 222769972 222769162 0.000000e+00 996.0
14 TraesCS2D01G387800 chr4A 88.808 822 76 11 2096 2915 535941611 535942418 0.000000e+00 994.0
15 TraesCS2D01G387800 chr4A 89.869 533 42 9 2154 2686 375968596 375968076 0.000000e+00 675.0
16 TraesCS2D01G387800 chr5B 88.606 825 67 11 2096 2915 291605778 291604976 0.000000e+00 977.0
17 TraesCS2D01G387800 chr5B 84.471 908 113 21 1369 2271 496648921 496648037 0.000000e+00 870.0
18 TraesCS2D01G387800 chr5B 92.857 70 4 1 1027 1095 496649424 496649355 3.290000e-17 100.0
19 TraesCS2D01G387800 chr5B 93.750 64 4 0 1032 1095 496649311 496649248 4.260000e-16 97.1
20 TraesCS2D01G387800 chr7B 87.726 831 67 13 2096 2915 428783798 428784604 0.000000e+00 937.0
21 TraesCS2D01G387800 chr7A 85.210 906 93 21 1365 2265 369895114 369894245 0.000000e+00 893.0
22 TraesCS2D01G387800 chr7A 89.908 327 21 6 1020 1341 369895419 369895100 1.340000e-110 411.0
23 TraesCS2D01G387800 chr7A 86.139 303 36 5 4867 5168 223686661 223686364 6.460000e-84 322.0
24 TraesCS2D01G387800 chr7A 85.893 319 19 6 1027 1341 705117590 705117294 3.000000e-82 316.0
25 TraesCS2D01G387800 chr7A 85.093 322 22 13 1024 1341 408599492 408599791 6.500000e-79 305.0
26 TraesCS2D01G387800 chr7A 93.642 173 6 3 1955 2127 320367651 320367484 2.390000e-63 254.0
27 TraesCS2D01G387800 chr7A 81.768 181 30 3 1629 1809 611728487 611728664 1.160000e-31 148.0
28 TraesCS2D01G387800 chr1A 83.703 902 103 22 1370 2265 382777870 382777007 0.000000e+00 811.0
29 TraesCS2D01G387800 chr1A 88.037 326 28 7 1020 1341 382778178 382777860 4.890000e-100 375.0
30 TraesCS2D01G387800 chr1B 82.812 896 113 20 1379 2271 82619649 82618792 0.000000e+00 763.0
31 TraesCS2D01G387800 chr1B 84.223 412 46 7 1831 2231 468218832 468218429 2.920000e-102 383.0
32 TraesCS2D01G387800 chr1B 85.032 314 38 7 4862 5168 17526822 17527133 1.400000e-80 311.0
33 TraesCS2D01G387800 chr1B 85.304 313 32 6 4865 5168 675986074 675985767 1.400000e-80 311.0
34 TraesCS2D01G387800 chr1B 83.699 319 30 11 1027 1341 82619949 82619649 1.100000e-71 281.0
35 TraesCS2D01G387800 chr6B 90.807 533 38 6 2154 2686 518610308 518610829 0.000000e+00 702.0
36 TraesCS2D01G387800 chr6B 87.166 374 30 7 1870 2231 637179454 637179821 4.820000e-110 409.0
37 TraesCS2D01G387800 chr6B 84.401 359 48 8 1137 1489 512234431 512234787 3.830000e-91 346.0
38 TraesCS2D01G387800 chr6B 94.220 173 6 2 1955 2127 518610139 518610307 1.430000e-65 261.0
39 TraesCS2D01G387800 chr5D 87.702 309 31 5 4865 5168 242919820 242920126 2.290000e-93 353.0
40 TraesCS2D01G387800 chr6A 85.938 320 40 5 1156 1471 452099978 452099660 2.310000e-88 337.0
41 TraesCS2D01G387800 chr6A 83.799 179 13 5 2881 3059 409745542 409745380 6.930000e-34 156.0
42 TraesCS2D01G387800 chr6D 83.844 359 50 8 1137 1489 315178662 315178306 8.290000e-88 335.0
43 TraesCS2D01G387800 chr6D 85.437 309 38 6 4865 5168 420556798 420557104 1.080000e-81 315.0
44 TraesCS2D01G387800 chr6D 85.397 315 29 10 4862 5168 223932709 223933014 1.400000e-80 311.0
45 TraesCS2D01G387800 chr3A 86.230 305 35 6 4867 5168 647457103 647456803 1.790000e-84 324.0
46 TraesCS2D01G387800 chr1D 85.669 314 35 8 4862 5168 423279040 423279350 6.460000e-84 322.0
47 TraesCS2D01G387800 chr4B 86.034 179 9 4 2881 3059 360899010 360898848 1.480000e-40 178.0
48 TraesCS2D01G387800 chr4B 90.756 119 7 3 2941 3059 205679043 205679157 6.930000e-34 156.0
49 TraesCS2D01G387800 chr7D 81.768 181 30 3 1629 1809 531439817 531439994 1.160000e-31 148.0
50 TraesCS2D01G387800 chr3B 88.793 116 9 2 2944 3059 397264567 397264456 6.980000e-29 139.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G387800 chr2D 493173155 493178322 5167 True 9544.0 9544 100.000000 1 5168 1 chr2D.!!$R4 5167
1 TraesCS2D01G387800 chr2D 245572126 245572941 815 True 1079.0 1079 90.580000 2096 2915 1 chr2D.!!$R1 819
2 TraesCS2D01G387800 chr2B 581467714 581472274 4560 True 5904.0 5904 90.065000 1 4666 1 chr2B.!!$R2 4665
3 TraesCS2D01G387800 chr2A 640268922 640273270 4348 False 2834.5 5151 88.257500 132 4578 2 chr2A.!!$F3 4446
4 TraesCS2D01G387800 chr2A 302436509 302437322 813 False 1038.0 1038 89.709000 2096 2915 1 chr2A.!!$F1 819
5 TraesCS2D01G387800 chr2A 424537545 424538501 956 True 625.0 1068 89.237000 1829 2915 2 chr2A.!!$R2 1086
6 TraesCS2D01G387800 chr5A 222769162 222769972 810 True 996.0 996 88.862000 2096 2915 1 chr5A.!!$R1 819
7 TraesCS2D01G387800 chr4A 535941611 535942418 807 False 994.0 994 88.808000 2096 2915 1 chr4A.!!$F1 819
8 TraesCS2D01G387800 chr4A 375968076 375968596 520 True 675.0 675 89.869000 2154 2686 1 chr4A.!!$R1 532
9 TraesCS2D01G387800 chr5B 291604976 291605778 802 True 977.0 977 88.606000 2096 2915 1 chr5B.!!$R1 819
10 TraesCS2D01G387800 chr5B 496648037 496649424 1387 True 355.7 870 90.359333 1027 2271 3 chr5B.!!$R2 1244
11 TraesCS2D01G387800 chr7B 428783798 428784604 806 False 937.0 937 87.726000 2096 2915 1 chr7B.!!$F1 819
12 TraesCS2D01G387800 chr7A 369894245 369895419 1174 True 652.0 893 87.559000 1020 2265 2 chr7A.!!$R4 1245
13 TraesCS2D01G387800 chr1A 382777007 382778178 1171 True 593.0 811 85.870000 1020 2265 2 chr1A.!!$R1 1245
14 TraesCS2D01G387800 chr1B 82618792 82619949 1157 True 522.0 763 83.255500 1027 2271 2 chr1B.!!$R3 1244
15 TraesCS2D01G387800 chr6B 518610139 518610829 690 False 481.5 702 92.513500 1955 2686 2 chr6B.!!$F3 731

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
736 776 0.391661 TCCGCTCTTTCCTGATGTGC 60.392 55.0 0.00 0.0 0.00 4.57 F
2206 2564 1.234821 TGAACTCACGATTTGGTGGC 58.765 50.0 0.00 0.0 38.46 5.01 F
2994 3367 0.037232 AAGGACTAGTTCAGGCGCAC 60.037 55.0 10.83 0.0 30.07 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2608 2970 0.308376 GGCGTTACGTTTGCTTCCAA 59.692 50.0 6.63 0.0 0.00 3.53 R
3186 3559 0.034186 TCAGCACCCATGGTTCATCC 60.034 55.0 11.73 0.0 33.06 3.51 R
4875 5271 0.029567 TTGTTTAGCGCGGTTGTTGG 59.970 50.0 19.09 0.0 0.00 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.296392 AATCACGCTAGGCTGTGCA 59.704 52.632 13.25 0.00 34.81 4.57
61 62 4.000988 ACTAACTGAACAAGGCAATACGG 58.999 43.478 0.00 0.00 0.00 4.02
84 85 2.620779 CTTCGTCGAAGCTTCAGAGA 57.379 50.000 25.47 16.93 32.78 3.10
85 86 2.935042 CTTCGTCGAAGCTTCAGAGAA 58.065 47.619 25.47 21.95 32.78 2.87
86 87 3.309388 CTTCGTCGAAGCTTCAGAGAAA 58.691 45.455 25.47 16.61 32.78 2.52
87 88 3.364889 TCGTCGAAGCTTCAGAGAAAA 57.635 42.857 25.47 4.66 0.00 2.29
88 89 3.309388 TCGTCGAAGCTTCAGAGAAAAG 58.691 45.455 25.47 7.27 0.00 2.27
89 90 3.053455 CGTCGAAGCTTCAGAGAAAAGT 58.947 45.455 25.47 0.00 0.00 2.66
90 91 3.491267 CGTCGAAGCTTCAGAGAAAAGTT 59.509 43.478 25.47 0.00 0.00 2.66
91 92 4.025647 CGTCGAAGCTTCAGAGAAAAGTTT 60.026 41.667 25.47 0.00 30.99 2.66
156 162 4.278310 TCCGATCAGTGAGTCTAATCCAA 58.722 43.478 0.00 0.00 0.00 3.53
413 448 2.260869 GCAGCGCCCAAACTTCTCA 61.261 57.895 2.29 0.00 0.00 3.27
493 528 0.595567 TCGCGCCGCTCGTATAAATT 60.596 50.000 7.78 0.00 41.07 1.82
566 605 2.098680 CACGAGCCGAGTCGAGTC 59.901 66.667 15.64 10.37 42.85 3.36
567 606 3.488978 ACGAGCCGAGTCGAGTCG 61.489 66.667 30.99 30.99 42.85 4.18
568 607 3.186730 CGAGCCGAGTCGAGTCGA 61.187 66.667 37.30 12.09 42.85 4.20
569 608 2.737688 CGAGCCGAGTCGAGTCGAA 61.738 63.158 37.30 0.00 42.85 3.71
570 609 1.722677 GAGCCGAGTCGAGTCGAAT 59.277 57.895 37.30 26.43 42.85 3.34
687 727 4.285517 TCAGAGTTCTTGCCTTCATCTTCT 59.714 41.667 0.00 0.00 0.00 2.85
688 728 4.392445 CAGAGTTCTTGCCTTCATCTTCTG 59.608 45.833 0.00 0.00 0.00 3.02
691 731 1.632409 TCTTGCCTTCATCTTCTGGCT 59.368 47.619 0.00 0.00 45.11 4.75
698 738 0.972471 TCATCTTCTGGCTCGGCTCA 60.972 55.000 0.00 0.00 0.00 4.26
718 758 1.804748 AGACGCCTCGTTTCCATTTTC 59.195 47.619 0.00 0.00 41.37 2.29
724 764 2.076863 CTCGTTTCCATTTTCCGCTCT 58.923 47.619 0.00 0.00 0.00 4.09
727 767 3.058501 TCGTTTCCATTTTCCGCTCTTTC 60.059 43.478 0.00 0.00 0.00 2.62
728 768 3.575630 GTTTCCATTTTCCGCTCTTTCC 58.424 45.455 0.00 0.00 0.00 3.13
729 769 2.879103 TCCATTTTCCGCTCTTTCCT 57.121 45.000 0.00 0.00 0.00 3.36
730 770 2.436417 TCCATTTTCCGCTCTTTCCTG 58.564 47.619 0.00 0.00 0.00 3.86
731 771 2.039746 TCCATTTTCCGCTCTTTCCTGA 59.960 45.455 0.00 0.00 0.00 3.86
732 772 3.019564 CCATTTTCCGCTCTTTCCTGAT 58.980 45.455 0.00 0.00 0.00 2.90
735 775 2.099141 TTCCGCTCTTTCCTGATGTG 57.901 50.000 0.00 0.00 0.00 3.21
736 776 0.391661 TCCGCTCTTTCCTGATGTGC 60.392 55.000 0.00 0.00 0.00 4.57
781 857 2.757508 TCTGGAGCAGAGCGGAGG 60.758 66.667 0.00 0.00 35.39 4.30
782 858 3.847602 CTGGAGCAGAGCGGAGGG 61.848 72.222 0.00 0.00 32.44 4.30
868 957 9.796120 GGCAATTGTTTGTTTAATATGCTACTA 57.204 29.630 7.40 0.00 35.17 1.82
905 994 4.715534 TCATCCTGGGTTAGTCAACAAA 57.284 40.909 0.00 0.00 36.29 2.83
961 1053 2.359107 ACTGCACATGGACGCCTG 60.359 61.111 0.00 0.00 0.00 4.85
984 1076 9.209175 CCTGATGGCTAGTACTATATTTGTTTC 57.791 37.037 2.33 0.00 0.00 2.78
1017 1109 2.746277 ATGGGCTCACGGCGTTTC 60.746 61.111 11.19 1.55 42.94 2.78
1018 1110 3.254024 ATGGGCTCACGGCGTTTCT 62.254 57.895 11.19 0.00 42.94 2.52
1650 1990 2.350134 GTGGGTTCGGGTCCTTCC 59.650 66.667 0.00 0.00 0.00 3.46
1813 2153 4.601084 CTCCCTCTCAGAAAGGTACAGTA 58.399 47.826 0.00 0.00 31.51 2.74
1817 2157 4.381079 CCTCTCAGAAAGGTACAGTACAGC 60.381 50.000 12.89 0.00 0.00 4.40
1827 2167 3.367025 GGTACAGTACAGCACAAACGATC 59.633 47.826 12.89 0.00 0.00 3.69
2138 2491 8.866956 GTCTGCATTTTATTTTCTTCTTGATGG 58.133 33.333 0.00 0.00 0.00 3.51
2193 2548 3.120511 GCAATCGGTCTTCAGTTGAACTC 60.121 47.826 0.00 0.00 0.00 3.01
2206 2564 1.234821 TGAACTCACGATTTGGTGGC 58.765 50.000 0.00 0.00 38.46 5.01
2418 2779 9.445786 AATCAAATCGTGTTTTAACTGTGTAAG 57.554 29.630 0.00 0.00 0.00 2.34
2608 2970 0.322546 CCACCTTCGGGCTAAAAGCT 60.323 55.000 0.00 0.00 41.99 3.74
2640 3008 4.808558 ACGTAACGCCTACATGACTTTTA 58.191 39.130 0.00 0.00 0.00 1.52
2722 3094 3.749609 AGTTCACCGTTTTAAATCCTCGG 59.250 43.478 15.11 15.11 45.53 4.63
2727 3099 4.273005 CCGTTTTAAATCCTCGGTGATG 57.727 45.455 11.03 0.00 36.99 3.07
2879 3252 0.044855 AGCAGGAGGGGAAGTGGTAT 59.955 55.000 0.00 0.00 0.00 2.73
2891 3264 0.698238 AGTGGTATTCAGCCAAGGCA 59.302 50.000 14.40 0.00 44.88 4.75
2962 3335 6.596106 AGTGTGTGTGTGTGTTACTGAATTTA 59.404 34.615 0.00 0.00 0.00 1.40
2991 3364 1.272490 TGTCAAGGACTAGTTCAGGCG 59.728 52.381 3.42 0.00 30.07 5.52
2994 3367 0.037232 AAGGACTAGTTCAGGCGCAC 60.037 55.000 10.83 0.00 30.07 5.34
2995 3368 1.185618 AGGACTAGTTCAGGCGCACA 61.186 55.000 10.83 0.00 30.07 4.57
2996 3369 0.320421 GGACTAGTTCAGGCGCACAA 60.320 55.000 10.83 0.00 30.07 3.33
2997 3370 1.676014 GGACTAGTTCAGGCGCACAAT 60.676 52.381 10.83 0.00 30.07 2.71
2998 3371 2.418197 GGACTAGTTCAGGCGCACAATA 60.418 50.000 10.83 0.00 30.07 1.90
2999 3372 2.860735 GACTAGTTCAGGCGCACAATAG 59.139 50.000 10.83 5.05 0.00 1.73
3012 3385 3.549471 CGCACAATAGAGCTTAGACTGTG 59.451 47.826 10.72 10.72 36.60 3.66
3024 3397 2.789409 AGACTGTGCCCTCCATTTAC 57.211 50.000 0.00 0.00 0.00 2.01
3084 3457 2.996621 CGGCTTCTACAACTTCCTCAAG 59.003 50.000 0.00 0.00 35.50 3.02
3148 3521 1.592400 CGGCCGTCTCAACAGAGGTA 61.592 60.000 19.50 0.00 33.34 3.08
3151 3524 2.549349 GGCCGTCTCAACAGAGGTAAAA 60.549 50.000 0.00 0.00 33.34 1.52
3153 3526 3.125316 GCCGTCTCAACAGAGGTAAAATG 59.875 47.826 0.00 0.00 33.34 2.32
3154 3527 4.566004 CCGTCTCAACAGAGGTAAAATGA 58.434 43.478 0.00 0.00 33.34 2.57
3155 3528 4.994852 CCGTCTCAACAGAGGTAAAATGAA 59.005 41.667 0.00 0.00 33.34 2.57
3156 3529 5.643777 CCGTCTCAACAGAGGTAAAATGAAT 59.356 40.000 0.00 0.00 33.34 2.57
3157 3530 6.816640 CCGTCTCAACAGAGGTAAAATGAATA 59.183 38.462 0.00 0.00 33.34 1.75
3160 3533 8.669243 GTCTCAACAGAGGTAAAATGAATAAGG 58.331 37.037 0.00 0.00 0.00 2.69
3161 3534 8.383175 TCTCAACAGAGGTAAAATGAATAAGGT 58.617 33.333 0.00 0.00 0.00 3.50
3162 3535 8.934023 TCAACAGAGGTAAAATGAATAAGGTT 57.066 30.769 0.00 0.00 0.00 3.50
3163 3536 9.362151 TCAACAGAGGTAAAATGAATAAGGTTT 57.638 29.630 0.00 0.00 0.00 3.27
3164 3537 9.981114 CAACAGAGGTAAAATGAATAAGGTTTT 57.019 29.630 0.00 0.00 0.00 2.43
3167 3540 9.769093 CAGAGGTAAAATGAATAAGGTTTTACG 57.231 33.333 11.52 0.00 43.80 3.18
3168 3541 8.456471 AGAGGTAAAATGAATAAGGTTTTACGC 58.544 33.333 11.52 7.89 43.80 4.42
3169 3542 8.113173 AGGTAAAATGAATAAGGTTTTACGCA 57.887 30.769 11.52 0.00 43.80 5.24
3170 3543 8.745590 AGGTAAAATGAATAAGGTTTTACGCAT 58.254 29.630 11.52 0.00 43.80 4.73
3174 3547 9.705290 AAAATGAATAAGGTTTTACGCATTTCT 57.295 25.926 0.00 0.00 36.21 2.52
3175 3548 9.705290 AAATGAATAAGGTTTTACGCATTTCTT 57.295 25.926 0.00 0.00 34.32 2.52
3177 3550 7.877003 TGAATAAGGTTTTACGCATTTCTTGA 58.123 30.769 0.00 0.00 0.00 3.02
3179 3552 8.687824 AATAAGGTTTTACGCATTTCTTGATG 57.312 30.769 0.00 0.00 0.00 3.07
3180 3553 5.705609 AGGTTTTACGCATTTCTTGATGT 57.294 34.783 0.00 0.00 0.00 3.06
3181 3554 6.811253 AGGTTTTACGCATTTCTTGATGTA 57.189 33.333 0.00 0.00 0.00 2.29
3184 3557 8.952278 AGGTTTTACGCATTTCTTGATGTATTA 58.048 29.630 0.00 0.00 0.00 0.98
3185 3558 9.006215 GGTTTTACGCATTTCTTGATGTATTAC 57.994 33.333 0.00 0.00 0.00 1.89
3186 3559 8.721476 GTTTTACGCATTTCTTGATGTATTACG 58.279 33.333 0.00 0.00 0.00 3.18
3187 3560 5.403897 ACGCATTTCTTGATGTATTACGG 57.596 39.130 0.00 0.00 0.00 4.02
3198 3587 5.304778 TGATGTATTACGGATGAACCATGG 58.695 41.667 11.19 11.19 38.90 3.66
3199 3588 4.079980 TGTATTACGGATGAACCATGGG 57.920 45.455 18.09 0.00 38.90 4.00
3208 3597 0.250858 TGAACCATGGGTGCTGACAG 60.251 55.000 18.09 0.00 35.34 3.51
3209 3598 0.250901 GAACCATGGGTGCTGACAGT 60.251 55.000 18.09 0.00 35.34 3.55
3210 3599 1.003118 GAACCATGGGTGCTGACAGTA 59.997 52.381 18.09 0.00 35.34 2.74
3211 3600 0.615331 ACCATGGGTGCTGACAGTAG 59.385 55.000 18.09 0.00 32.98 2.57
3212 3601 0.745845 CCATGGGTGCTGACAGTAGC 60.746 60.000 13.62 13.62 43.95 3.58
3213 3602 0.251354 CATGGGTGCTGACAGTAGCT 59.749 55.000 19.92 1.14 44.01 3.32
3214 3603 0.251354 ATGGGTGCTGACAGTAGCTG 59.749 55.000 19.92 0.00 44.01 4.24
3215 3604 1.078848 GGGTGCTGACAGTAGCTGG 60.079 63.158 19.92 0.00 44.01 4.85
3216 3605 1.674057 GGTGCTGACAGTAGCTGGT 59.326 57.895 14.57 0.00 44.01 4.00
3217 3606 0.671781 GGTGCTGACAGTAGCTGGTG 60.672 60.000 14.57 0.00 44.01 4.17
3218 3607 1.004560 TGCTGACAGTAGCTGGTGC 60.005 57.895 3.99 3.01 44.01 5.01
3219 3608 1.004560 GCTGACAGTAGCTGGTGCA 60.005 57.895 3.99 0.00 42.74 4.57
3220 3609 1.294659 GCTGACAGTAGCTGGTGCAC 61.295 60.000 8.80 8.80 42.74 4.57
3226 3615 0.037303 AGTAGCTGGTGCACTGCATT 59.963 50.000 27.40 15.87 45.49 3.56
3354 3743 2.971413 CTGCTCAGCGCCATAGCC 60.971 66.667 19.71 6.34 38.05 3.93
3480 3869 0.980423 TGACCGACATGAACATGGGA 59.020 50.000 17.25 0.00 42.91 4.37
3861 4250 3.414700 CTCTGCGCGGCGTTCTTT 61.415 61.111 24.46 0.00 0.00 2.52
3924 4313 4.065281 CGGCTCGGGAGGTTCGTT 62.065 66.667 0.00 0.00 0.00 3.85
4038 4427 3.007973 GCTCGACGGGAAGAAGGCT 62.008 63.158 0.00 0.00 0.00 4.58
4180 4569 3.778265 GGAAGCTAGAGAGAGGATCCAT 58.222 50.000 15.82 0.99 33.66 3.41
4238 4627 5.573337 AGAAGCAAATAACCAGAGCATTC 57.427 39.130 0.00 0.00 0.00 2.67
4239 4628 4.400567 AGAAGCAAATAACCAGAGCATTCC 59.599 41.667 0.00 0.00 0.00 3.01
4240 4629 3.700538 AGCAAATAACCAGAGCATTCCA 58.299 40.909 0.00 0.00 0.00 3.53
4241 4630 4.284178 AGCAAATAACCAGAGCATTCCAT 58.716 39.130 0.00 0.00 0.00 3.41
4242 4631 4.713321 AGCAAATAACCAGAGCATTCCATT 59.287 37.500 0.00 0.00 0.00 3.16
4260 4654 0.900647 TTTTGGGGTGGCCATTACGG 60.901 55.000 9.72 0.00 38.11 4.02
4414 4808 6.480320 CCTACAGACTACAAAGAATATGGTGC 59.520 42.308 0.00 0.00 0.00 5.01
4509 4903 3.604582 AGAAGAGTACATTTGCTCCTGC 58.395 45.455 0.00 0.00 35.12 4.85
4510 4904 3.262915 AGAAGAGTACATTTGCTCCTGCT 59.737 43.478 0.00 0.00 40.48 4.24
4511 4905 3.258971 AGAGTACATTTGCTCCTGCTC 57.741 47.619 0.00 0.00 40.48 4.26
4512 4906 2.093235 AGAGTACATTTGCTCCTGCTCC 60.093 50.000 0.00 0.00 40.48 4.70
4513 4907 1.912043 AGTACATTTGCTCCTGCTCCT 59.088 47.619 0.00 0.00 40.48 3.69
4514 4908 2.093235 AGTACATTTGCTCCTGCTCCTC 60.093 50.000 0.00 0.00 40.48 3.71
4544 4938 0.585838 TCGTTTTTAACCGGTTCGCC 59.414 50.000 26.16 7.68 0.00 5.54
4582 4976 9.565213 AGTATAACTTACATTTGACTCGTACAC 57.435 33.333 0.00 0.00 0.00 2.90
4583 4977 9.565213 GTATAACTTACATTTGACTCGTACACT 57.435 33.333 0.00 0.00 0.00 3.55
4598 4992 3.362797 ACTTCGTCGAGGCGAGCA 61.363 61.111 3.99 0.00 42.10 4.26
4666 5062 3.706373 ATCACACTTCGGCCGCCT 61.706 61.111 23.51 0.84 0.00 5.52
4667 5063 3.665675 ATCACACTTCGGCCGCCTC 62.666 63.158 23.51 0.00 0.00 4.70
4668 5064 4.680237 CACACTTCGGCCGCCTCA 62.680 66.667 23.51 0.00 0.00 3.86
4669 5065 3.706373 ACACTTCGGCCGCCTCAT 61.706 61.111 23.51 2.14 0.00 2.90
4670 5066 2.892425 CACTTCGGCCGCCTCATC 60.892 66.667 23.51 0.00 0.00 2.92
4671 5067 3.390521 ACTTCGGCCGCCTCATCA 61.391 61.111 23.51 0.00 0.00 3.07
4672 5068 2.109799 CTTCGGCCGCCTCATCAT 59.890 61.111 23.51 0.00 0.00 2.45
4673 5069 2.203056 TTCGGCCGCCTCATCATG 60.203 61.111 23.51 0.00 0.00 3.07
4674 5070 2.930385 CTTCGGCCGCCTCATCATGT 62.930 60.000 23.51 0.00 0.00 3.21
4675 5071 2.514592 CGGCCGCCTCATCATGTT 60.515 61.111 14.67 0.00 0.00 2.71
4676 5072 2.827051 CGGCCGCCTCATCATGTTG 61.827 63.158 14.67 0.00 0.00 3.33
4677 5073 1.750399 GGCCGCCTCATCATGTTGT 60.750 57.895 0.71 0.00 0.00 3.32
4678 5074 1.315257 GGCCGCCTCATCATGTTGTT 61.315 55.000 0.71 0.00 0.00 2.83
4679 5075 0.527565 GCCGCCTCATCATGTTGTTT 59.472 50.000 3.76 0.00 0.00 2.83
4680 5076 1.468054 GCCGCCTCATCATGTTGTTTC 60.468 52.381 3.76 0.00 0.00 2.78
4681 5077 2.086869 CCGCCTCATCATGTTGTTTCT 58.913 47.619 3.76 0.00 0.00 2.52
4682 5078 2.096496 CCGCCTCATCATGTTGTTTCTC 59.904 50.000 3.76 0.00 0.00 2.87
4683 5079 2.222886 CGCCTCATCATGTTGTTTCTCG 60.223 50.000 3.76 0.00 0.00 4.04
4684 5080 2.476854 GCCTCATCATGTTGTTTCTCGC 60.477 50.000 3.76 0.00 0.00 5.03
4685 5081 3.005554 CCTCATCATGTTGTTTCTCGCT 58.994 45.455 3.76 0.00 0.00 4.93
4686 5082 3.181513 CCTCATCATGTTGTTTCTCGCTG 60.182 47.826 3.76 0.00 0.00 5.18
4687 5083 2.160219 TCATCATGTTGTTTCTCGCTGC 59.840 45.455 3.76 0.00 0.00 5.25
4688 5084 0.874390 TCATGTTGTTTCTCGCTGCC 59.126 50.000 0.00 0.00 0.00 4.85
4689 5085 0.453282 CATGTTGTTTCTCGCTGCCG 60.453 55.000 0.00 0.00 0.00 5.69
4690 5086 2.127232 GTTGTTTCTCGCTGCCGC 60.127 61.111 0.00 0.00 0.00 6.53
4691 5087 2.590291 TTGTTTCTCGCTGCCGCA 60.590 55.556 0.00 0.00 35.30 5.69
4692 5088 1.965930 TTGTTTCTCGCTGCCGCAT 60.966 52.632 0.00 0.00 35.30 4.73
4693 5089 2.099062 GTTTCTCGCTGCCGCATG 59.901 61.111 0.00 0.00 35.30 4.06
4694 5090 2.358615 TTTCTCGCTGCCGCATGT 60.359 55.556 0.00 0.00 35.30 3.21
4695 5091 2.679934 TTTCTCGCTGCCGCATGTG 61.680 57.895 0.00 0.00 35.30 3.21
4707 5103 3.716195 CATGTGCTCCCCGGGTGA 61.716 66.667 21.85 15.47 0.00 4.02
4708 5104 2.933287 ATGTGCTCCCCGGGTGAA 60.933 61.111 21.85 3.00 0.00 3.18
4709 5105 2.534396 ATGTGCTCCCCGGGTGAAA 61.534 57.895 21.85 4.92 0.00 2.69
4710 5106 2.359975 GTGCTCCCCGGGTGAAAG 60.360 66.667 21.85 12.20 0.00 2.62
4711 5107 2.528127 TGCTCCCCGGGTGAAAGA 60.528 61.111 21.85 8.09 0.00 2.52
4712 5108 2.046217 GCTCCCCGGGTGAAAGAC 60.046 66.667 21.85 4.25 0.00 3.01
4713 5109 2.264794 CTCCCCGGGTGAAAGACG 59.735 66.667 21.85 0.35 0.00 4.18
4714 5110 2.203669 TCCCCGGGTGAAAGACGA 60.204 61.111 21.85 3.32 0.00 4.20
4715 5111 2.227089 CTCCCCGGGTGAAAGACGAG 62.227 65.000 21.85 12.25 0.00 4.18
4716 5112 2.434359 CCCGGGTGAAAGACGAGC 60.434 66.667 14.18 0.00 0.00 5.03
4717 5113 2.434359 CCGGGTGAAAGACGAGCC 60.434 66.667 0.00 0.00 0.00 4.70
4718 5114 2.809601 CGGGTGAAAGACGAGCCG 60.810 66.667 0.00 0.00 45.82 5.52
4719 5115 3.119096 GGGTGAAAGACGAGCCGC 61.119 66.667 0.00 0.00 0.00 6.53
4720 5116 3.119096 GGTGAAAGACGAGCCGCC 61.119 66.667 0.00 0.00 0.00 6.13
4721 5117 3.119096 GTGAAAGACGAGCCGCCC 61.119 66.667 0.00 0.00 0.00 6.13
4722 5118 4.388499 TGAAAGACGAGCCGCCCC 62.388 66.667 0.00 0.00 0.00 5.80
4723 5119 4.083862 GAAAGACGAGCCGCCCCT 62.084 66.667 0.00 0.00 0.00 4.79
4724 5120 3.607370 GAAAGACGAGCCGCCCCTT 62.607 63.158 0.00 0.00 0.00 3.95
4725 5121 3.901797 AAAGACGAGCCGCCCCTTG 62.902 63.158 0.00 0.00 0.00 3.61
4750 5146 3.121030 CTTGGCGGACGCAAGGAG 61.121 66.667 18.95 6.29 44.11 3.69
4751 5147 4.697756 TTGGCGGACGCAAGGAGG 62.698 66.667 18.95 0.00 44.11 4.30
4753 5149 4.699522 GGCGGACGCAAGGAGGTT 62.700 66.667 18.95 0.00 44.11 3.50
4754 5150 3.423154 GCGGACGCAAGGAGGTTG 61.423 66.667 12.31 0.00 46.39 3.77
4755 5151 2.742372 CGGACGCAAGGAGGTTGG 60.742 66.667 0.00 0.00 46.39 3.77
4756 5152 3.056328 GGACGCAAGGAGGTTGGC 61.056 66.667 0.00 0.00 46.39 4.52
4757 5153 3.423154 GACGCAAGGAGGTTGGCG 61.423 66.667 3.11 3.11 46.39 5.69
4761 5157 4.697756 CAAGGAGGTTGGCGCCGA 62.698 66.667 23.90 19.26 31.82 5.54
4762 5158 3.948719 AAGGAGGTTGGCGCCGAA 61.949 61.111 20.60 12.78 0.00 4.30
4763 5159 3.901797 AAGGAGGTTGGCGCCGAAG 62.902 63.158 20.60 0.00 0.00 3.79
4764 5160 4.699522 GGAGGTTGGCGCCGAAGT 62.700 66.667 20.60 8.58 0.00 3.01
4765 5161 2.263540 GAGGTTGGCGCCGAAGTA 59.736 61.111 20.60 0.00 0.00 2.24
4766 5162 1.810030 GAGGTTGGCGCCGAAGTAG 60.810 63.158 20.60 0.00 0.00 2.57
4767 5163 2.221906 GAGGTTGGCGCCGAAGTAGA 62.222 60.000 20.60 0.00 0.00 2.59
4768 5164 1.153429 GGTTGGCGCCGAAGTAGAT 60.153 57.895 20.60 0.00 0.00 1.98
4769 5165 1.429148 GGTTGGCGCCGAAGTAGATG 61.429 60.000 20.60 0.00 0.00 2.90
4770 5166 1.813753 TTGGCGCCGAAGTAGATGC 60.814 57.895 23.90 0.00 0.00 3.91
4772 5168 3.330853 GCGCCGAAGTAGATGCGG 61.331 66.667 0.00 0.00 46.59 5.69
4775 5171 2.658593 CCGAAGTAGATGCGGCCG 60.659 66.667 24.05 24.05 38.46 6.13
4776 5172 2.411701 CGAAGTAGATGCGGCCGA 59.588 61.111 33.48 15.19 0.00 5.54
4777 5173 1.658717 CGAAGTAGATGCGGCCGAG 60.659 63.158 33.48 0.00 0.00 4.63
4778 5174 1.951631 GAAGTAGATGCGGCCGAGC 60.952 63.158 33.48 17.24 37.71 5.03
4779 5175 3.774959 AAGTAGATGCGGCCGAGCG 62.775 63.158 33.48 1.43 40.67 5.03
4780 5176 4.266070 GTAGATGCGGCCGAGCGA 62.266 66.667 33.48 10.58 40.67 4.93
4781 5177 3.295273 TAGATGCGGCCGAGCGAT 61.295 61.111 33.48 14.49 40.67 4.58
4782 5178 3.558099 TAGATGCGGCCGAGCGATG 62.558 63.158 33.48 0.00 40.67 3.84
4794 5190 4.240881 GCGATGGGCAAGAATGGA 57.759 55.556 0.00 0.00 42.87 3.41
4795 5191 2.028130 GCGATGGGCAAGAATGGAG 58.972 57.895 0.00 0.00 42.87 3.86
4796 5192 1.450531 GCGATGGGCAAGAATGGAGG 61.451 60.000 0.00 0.00 42.87 4.30
4797 5193 0.181114 CGATGGGCAAGAATGGAGGA 59.819 55.000 0.00 0.00 0.00 3.71
4798 5194 1.408683 CGATGGGCAAGAATGGAGGAA 60.409 52.381 0.00 0.00 0.00 3.36
4799 5195 2.738743 GATGGGCAAGAATGGAGGAAA 58.261 47.619 0.00 0.00 0.00 3.13
4800 5196 2.692709 TGGGCAAGAATGGAGGAAAA 57.307 45.000 0.00 0.00 0.00 2.29
4801 5197 2.969628 TGGGCAAGAATGGAGGAAAAA 58.030 42.857 0.00 0.00 0.00 1.94
4828 5224 2.787144 TGGAGAGGCCATGGAGGA 59.213 61.111 18.40 0.00 43.33 3.71
4829 5225 1.319443 TGGAGAGGCCATGGAGGAT 59.681 57.895 18.40 0.00 43.33 3.24
4830 5226 1.058428 TGGAGAGGCCATGGAGGATG 61.058 60.000 18.40 0.00 43.33 3.51
4831 5227 0.765903 GGAGAGGCCATGGAGGATGA 60.766 60.000 18.40 0.00 41.22 2.92
4832 5228 1.135094 GAGAGGCCATGGAGGATGAA 58.865 55.000 18.40 0.00 41.22 2.57
4833 5229 1.704070 GAGAGGCCATGGAGGATGAAT 59.296 52.381 18.40 0.00 41.22 2.57
4834 5230 2.107901 GAGAGGCCATGGAGGATGAATT 59.892 50.000 18.40 0.00 41.22 2.17
4835 5231 3.328931 GAGAGGCCATGGAGGATGAATTA 59.671 47.826 18.40 0.00 41.22 1.40
4836 5232 3.921486 AGAGGCCATGGAGGATGAATTAT 59.079 43.478 18.40 0.00 41.22 1.28
4837 5233 4.018597 AGAGGCCATGGAGGATGAATTATC 60.019 45.833 18.40 0.00 41.22 1.75
4850 5246 5.855045 GATGAATTATCCTCCACTAACCGT 58.145 41.667 0.00 0.00 0.00 4.83
4851 5247 5.687166 TGAATTATCCTCCACTAACCGTT 57.313 39.130 0.00 0.00 0.00 4.44
4852 5248 6.795144 TGAATTATCCTCCACTAACCGTTA 57.205 37.500 0.00 0.00 0.00 3.18
4853 5249 7.369551 TGAATTATCCTCCACTAACCGTTAT 57.630 36.000 0.00 0.00 0.00 1.89
4854 5250 8.481492 TGAATTATCCTCCACTAACCGTTATA 57.519 34.615 0.00 0.00 0.00 0.98
4855 5251 8.926374 TGAATTATCCTCCACTAACCGTTATAA 58.074 33.333 0.00 0.00 0.00 0.98
4856 5252 9.420551 GAATTATCCTCCACTAACCGTTATAAG 57.579 37.037 0.00 0.00 0.00 1.73
4857 5253 4.660789 TCCTCCACTAACCGTTATAAGC 57.339 45.455 0.00 0.00 0.00 3.09
4858 5254 4.025360 TCCTCCACTAACCGTTATAAGCA 58.975 43.478 0.00 0.00 0.00 3.91
4859 5255 4.467082 TCCTCCACTAACCGTTATAAGCAA 59.533 41.667 0.00 0.00 0.00 3.91
4860 5256 5.129815 TCCTCCACTAACCGTTATAAGCAAT 59.870 40.000 0.00 0.00 0.00 3.56
4861 5257 5.465724 CCTCCACTAACCGTTATAAGCAATC 59.534 44.000 0.00 0.00 0.00 2.67
4862 5258 6.229936 TCCACTAACCGTTATAAGCAATCT 57.770 37.500 0.00 0.00 0.00 2.40
4863 5259 6.046593 TCCACTAACCGTTATAAGCAATCTG 58.953 40.000 0.00 0.00 0.00 2.90
4864 5260 5.815740 CCACTAACCGTTATAAGCAATCTGT 59.184 40.000 0.00 0.00 0.00 3.41
4865 5261 6.315393 CCACTAACCGTTATAAGCAATCTGTT 59.685 38.462 0.00 0.00 0.00 3.16
4866 5262 7.493320 CCACTAACCGTTATAAGCAATCTGTTA 59.507 37.037 0.00 0.00 0.00 2.41
4867 5263 8.540492 CACTAACCGTTATAAGCAATCTGTTAG 58.460 37.037 0.00 0.00 38.86 2.34
4868 5264 8.472413 ACTAACCGTTATAAGCAATCTGTTAGA 58.528 33.333 15.20 0.00 37.28 2.10
4869 5265 7.772332 AACCGTTATAAGCAATCTGTTAGAG 57.228 36.000 0.00 0.00 0.00 2.43
4870 5266 5.753921 ACCGTTATAAGCAATCTGTTAGAGC 59.246 40.000 0.00 0.00 0.00 4.09
4871 5267 5.753438 CCGTTATAAGCAATCTGTTAGAGCA 59.247 40.000 0.00 0.00 0.00 4.26
4872 5268 6.425114 CCGTTATAAGCAATCTGTTAGAGCAT 59.575 38.462 0.00 0.00 0.00 3.79
4873 5269 7.359598 CCGTTATAAGCAATCTGTTAGAGCATC 60.360 40.741 0.00 0.00 0.00 3.91
4885 5281 1.796796 GAGCATCTCCAACAACCGC 59.203 57.895 0.00 0.00 0.00 5.68
4886 5282 1.970917 GAGCATCTCCAACAACCGCG 61.971 60.000 0.00 0.00 0.00 6.46
4887 5283 2.480555 CATCTCCAACAACCGCGC 59.519 61.111 0.00 0.00 0.00 6.86
4888 5284 2.034879 CATCTCCAACAACCGCGCT 61.035 57.895 5.56 0.00 0.00 5.92
4889 5285 0.739462 CATCTCCAACAACCGCGCTA 60.739 55.000 5.56 0.00 0.00 4.26
4890 5286 0.036765 ATCTCCAACAACCGCGCTAA 60.037 50.000 5.56 0.00 0.00 3.09
4891 5287 0.249953 TCTCCAACAACCGCGCTAAA 60.250 50.000 5.56 0.00 0.00 1.85
4892 5288 0.110373 CTCCAACAACCGCGCTAAAC 60.110 55.000 5.56 0.00 0.00 2.01
4893 5289 0.814410 TCCAACAACCGCGCTAAACA 60.814 50.000 5.56 0.00 0.00 2.83
4894 5290 0.029567 CCAACAACCGCGCTAAACAA 59.970 50.000 5.56 0.00 0.00 2.83
4895 5291 1.394697 CAACAACCGCGCTAAACAAG 58.605 50.000 5.56 0.00 0.00 3.16
4903 5299 2.501865 GCTAAACAAGCGCCGCAC 60.502 61.111 13.36 0.00 42.53 5.34
4904 5300 2.175811 CTAAACAAGCGCCGCACC 59.824 61.111 13.36 0.00 0.00 5.01
4905 5301 3.645157 CTAAACAAGCGCCGCACCG 62.645 63.158 13.36 0.58 0.00 4.94
4913 5309 3.468841 CGCCGCACCGCAAAATTG 61.469 61.111 0.00 0.00 0.00 2.32
4914 5310 2.355718 GCCGCACCGCAAAATTGT 60.356 55.556 0.00 0.00 0.00 2.71
4915 5311 2.371923 GCCGCACCGCAAAATTGTC 61.372 57.895 0.00 0.00 0.00 3.18
4916 5312 1.732683 CCGCACCGCAAAATTGTCC 60.733 57.895 0.00 0.00 0.00 4.02
4917 5313 1.007964 CGCACCGCAAAATTGTCCA 60.008 52.632 0.00 0.00 0.00 4.02
4918 5314 0.388391 CGCACCGCAAAATTGTCCAT 60.388 50.000 0.00 0.00 0.00 3.41
4919 5315 1.794512 GCACCGCAAAATTGTCCATT 58.205 45.000 0.00 0.00 0.00 3.16
4920 5316 2.142319 GCACCGCAAAATTGTCCATTT 58.858 42.857 0.00 0.00 36.57 2.32
4921 5317 2.157474 GCACCGCAAAATTGTCCATTTC 59.843 45.455 0.00 0.00 33.60 2.17
4922 5318 3.388308 CACCGCAAAATTGTCCATTTCA 58.612 40.909 0.00 0.00 33.60 2.69
4923 5319 3.429543 CACCGCAAAATTGTCCATTTCAG 59.570 43.478 0.00 0.00 33.60 3.02
4924 5320 2.412770 CCGCAAAATTGTCCATTTCAGC 59.587 45.455 0.00 0.00 33.60 4.26
4925 5321 2.090967 CGCAAAATTGTCCATTTCAGCG 59.909 45.455 11.86 11.86 45.14 5.18
4926 5322 2.159801 GCAAAATTGTCCATTTCAGCGC 60.160 45.455 0.00 0.00 33.60 5.92
4927 5323 1.981254 AAATTGTCCATTTCAGCGCG 58.019 45.000 0.00 0.00 27.71 6.86
4928 5324 0.456653 AATTGTCCATTTCAGCGCGC 60.457 50.000 26.66 26.66 0.00 6.86
4929 5325 2.582202 ATTGTCCATTTCAGCGCGCG 62.582 55.000 28.44 28.44 0.00 6.86
4940 5336 2.022623 GCGCGCGCACAATTGATA 59.977 55.556 46.11 0.00 41.49 2.15
4941 5337 2.000323 GCGCGCGCACAATTGATAG 61.000 57.895 46.11 11.55 41.49 2.08
4942 5338 1.635810 CGCGCGCACAATTGATAGA 59.364 52.632 32.61 0.00 0.00 1.98
4943 5339 0.382272 CGCGCGCACAATTGATAGAG 60.382 55.000 32.61 5.56 0.00 2.43
4944 5340 0.652592 GCGCGCACAATTGATAGAGT 59.347 50.000 29.10 0.00 0.00 3.24
4945 5341 1.593070 GCGCGCACAATTGATAGAGTG 60.593 52.381 29.10 10.64 35.19 3.51
4946 5342 1.004610 CGCGCACAATTGATAGAGTGG 60.005 52.381 13.59 0.00 32.80 4.00
4947 5343 2.009774 GCGCACAATTGATAGAGTGGT 58.990 47.619 13.59 0.00 32.80 4.16
4948 5344 2.420022 GCGCACAATTGATAGAGTGGTT 59.580 45.455 13.59 0.00 32.80 3.67
4949 5345 3.485877 GCGCACAATTGATAGAGTGGTTC 60.486 47.826 13.59 0.00 32.80 3.62
4950 5346 3.063997 CGCACAATTGATAGAGTGGTTCC 59.936 47.826 13.59 0.00 32.80 3.62
4951 5347 4.009675 GCACAATTGATAGAGTGGTTCCA 58.990 43.478 13.59 0.00 32.80 3.53
4952 5348 4.095483 GCACAATTGATAGAGTGGTTCCAG 59.905 45.833 13.59 0.00 32.80 3.86
4953 5349 4.095483 CACAATTGATAGAGTGGTTCCAGC 59.905 45.833 13.59 0.00 0.00 4.85
4954 5350 2.672961 TTGATAGAGTGGTTCCAGCG 57.327 50.000 0.00 0.00 0.00 5.18
4955 5351 0.824109 TGATAGAGTGGTTCCAGCGG 59.176 55.000 0.00 0.00 0.00 5.52
4956 5352 0.105039 GATAGAGTGGTTCCAGCGGG 59.895 60.000 0.00 0.00 0.00 6.13
4957 5353 1.972660 ATAGAGTGGTTCCAGCGGGC 61.973 60.000 0.00 0.00 0.00 6.13
4966 5362 4.277593 CCAGCGGGCGCACAAAAA 62.278 61.111 11.77 0.00 44.88 1.94
4967 5363 3.029735 CAGCGGGCGCACAAAAAC 61.030 61.111 11.77 0.00 44.88 2.43
4968 5364 4.279043 AGCGGGCGCACAAAAACC 62.279 61.111 11.77 0.00 44.88 3.27
4987 5383 3.103289 CGCGCGCGGCAATATCTA 61.103 61.111 43.28 0.00 43.84 1.98
4988 5384 2.772189 GCGCGCGGCAATATCTAG 59.228 61.111 33.06 0.00 42.87 2.43
4989 5385 2.022129 GCGCGCGGCAATATCTAGT 61.022 57.895 33.06 0.00 42.87 2.57
4990 5386 1.557443 GCGCGCGGCAATATCTAGTT 61.557 55.000 33.06 0.00 42.87 2.24
4991 5387 0.435008 CGCGCGGCAATATCTAGTTC 59.565 55.000 24.84 0.00 0.00 3.01
4992 5388 1.497991 GCGCGGCAATATCTAGTTCA 58.502 50.000 8.83 0.00 0.00 3.18
4993 5389 1.457303 GCGCGGCAATATCTAGTTCAG 59.543 52.381 8.83 0.00 0.00 3.02
4994 5390 1.457303 CGCGGCAATATCTAGTTCAGC 59.543 52.381 0.00 0.00 0.00 4.26
4995 5391 1.457303 GCGGCAATATCTAGTTCAGCG 59.543 52.381 0.00 0.00 0.00 5.18
4996 5392 1.457303 CGGCAATATCTAGTTCAGCGC 59.543 52.381 0.00 0.00 0.00 5.92
4997 5393 1.457303 GGCAATATCTAGTTCAGCGCG 59.543 52.381 0.00 0.00 0.00 6.86
4998 5394 1.136502 GCAATATCTAGTTCAGCGCGC 60.137 52.381 26.66 26.66 0.00 6.86
4999 5395 1.123217 CAATATCTAGTTCAGCGCGCG 59.877 52.381 28.44 28.44 0.00 6.86
5000 5396 0.387367 ATATCTAGTTCAGCGCGCGG 60.387 55.000 33.06 26.50 0.00 6.46
5001 5397 2.402282 TATCTAGTTCAGCGCGCGGG 62.402 60.000 33.06 23.76 0.00 6.13
5002 5398 4.492160 CTAGTTCAGCGCGCGGGA 62.492 66.667 33.06 25.64 0.00 5.14
5003 5399 3.774959 CTAGTTCAGCGCGCGGGAT 62.775 63.158 33.06 19.66 0.00 3.85
5006 5402 4.751093 TTCAGCGCGCGGGATGAA 62.751 61.111 40.81 40.81 0.00 2.57
5007 5403 4.751093 TCAGCGCGCGGGATGAAA 62.751 61.111 36.69 19.22 0.00 2.69
5008 5404 4.520846 CAGCGCGCGGGATGAAAC 62.521 66.667 34.11 12.08 0.00 2.78
5009 5405 4.760047 AGCGCGCGGGATGAAACT 62.760 61.111 33.06 14.45 0.00 2.66
5010 5406 3.799755 GCGCGCGGGATGAAACTT 61.800 61.111 33.06 0.00 0.00 2.66
5011 5407 2.399611 CGCGCGGGATGAAACTTC 59.600 61.111 24.84 0.00 0.00 3.01
5012 5408 2.387445 CGCGCGGGATGAAACTTCA 61.387 57.895 24.84 0.00 42.14 3.02
5020 5416 1.715585 ATGAAACTTCATCGCGCCG 59.284 52.632 0.00 0.00 44.17 6.46
5021 5417 2.276680 GAAACTTCATCGCGCCGC 60.277 61.111 0.00 0.00 0.00 6.53
5022 5418 2.740714 GAAACTTCATCGCGCCGCT 61.741 57.895 7.78 0.00 0.00 5.52
5023 5419 2.240612 GAAACTTCATCGCGCCGCTT 62.241 55.000 7.78 0.00 0.00 4.68
5024 5420 1.017177 AAACTTCATCGCGCCGCTTA 61.017 50.000 7.78 0.00 0.00 3.09
5025 5421 0.810031 AACTTCATCGCGCCGCTTAT 60.810 50.000 7.78 0.00 0.00 1.73
5026 5422 0.810031 ACTTCATCGCGCCGCTTATT 60.810 50.000 7.78 0.00 0.00 1.40
5027 5423 0.304705 CTTCATCGCGCCGCTTATTT 59.695 50.000 7.78 0.00 0.00 1.40
5028 5424 0.027455 TTCATCGCGCCGCTTATTTG 59.973 50.000 7.78 0.00 0.00 2.32
5029 5425 1.087202 TCATCGCGCCGCTTATTTGT 61.087 50.000 7.78 0.00 0.00 2.83
5030 5426 0.248054 CATCGCGCCGCTTATTTGTT 60.248 50.000 7.78 0.00 0.00 2.83
5031 5427 0.248054 ATCGCGCCGCTTATTTGTTG 60.248 50.000 7.78 0.00 0.00 3.33
5032 5428 2.496257 CGCGCCGCTTATTTGTTGC 61.496 57.895 7.78 0.00 0.00 4.17
5036 5432 4.071374 CGCTTATTTGTTGCGCCC 57.929 55.556 4.18 0.00 43.08 6.13
5037 5433 1.867373 CGCTTATTTGTTGCGCCCG 60.867 57.895 4.18 0.00 43.08 6.13
5038 5434 2.158330 GCTTATTTGTTGCGCCCGC 61.158 57.895 4.18 5.60 42.35 6.13
5039 5435 1.506262 CTTATTTGTTGCGCCCGCT 59.494 52.632 14.13 0.00 42.51 5.52
5040 5436 0.523335 CTTATTTGTTGCGCCCGCTC 60.523 55.000 14.13 7.68 42.51 5.03
5041 5437 1.928706 TTATTTGTTGCGCCCGCTCC 61.929 55.000 14.13 4.89 42.51 4.70
5060 5456 3.184683 GCGCGCTGGACTCTCAAG 61.185 66.667 26.67 0.00 0.00 3.02
5061 5457 3.184683 CGCGCTGGACTCTCAAGC 61.185 66.667 5.56 0.00 0.00 4.01
5063 5459 3.184683 CGCTGGACTCTCAAGCGC 61.185 66.667 8.04 0.00 41.94 5.92
5064 5460 2.264166 GCTGGACTCTCAAGCGCT 59.736 61.111 2.64 2.64 0.00 5.92
5065 5461 1.809209 GCTGGACTCTCAAGCGCTC 60.809 63.158 12.06 0.00 0.00 5.03
5066 5462 1.515952 CTGGACTCTCAAGCGCTCG 60.516 63.158 12.06 0.00 0.00 5.03
5067 5463 2.883253 GGACTCTCAAGCGCTCGC 60.883 66.667 12.06 6.09 42.33 5.03
5079 5475 3.482783 GCTCGCTCGCAACTCCAC 61.483 66.667 0.00 0.00 0.00 4.02
5080 5476 3.175240 CTCGCTCGCAACTCCACG 61.175 66.667 0.00 0.00 0.00 4.94
5081 5477 3.898627 CTCGCTCGCAACTCCACGT 62.899 63.158 0.00 0.00 0.00 4.49
5082 5478 3.470567 CGCTCGCAACTCCACGTC 61.471 66.667 0.00 0.00 0.00 4.34
5083 5479 2.049063 GCTCGCAACTCCACGTCT 60.049 61.111 0.00 0.00 0.00 4.18
5084 5480 2.089349 GCTCGCAACTCCACGTCTC 61.089 63.158 0.00 0.00 0.00 3.36
5085 5481 1.444553 CTCGCAACTCCACGTCTCC 60.445 63.158 0.00 0.00 0.00 3.71
5086 5482 2.142357 CTCGCAACTCCACGTCTCCA 62.142 60.000 0.00 0.00 0.00 3.86
5087 5483 2.022129 CGCAACTCCACGTCTCCAC 61.022 63.158 0.00 0.00 0.00 4.02
5088 5484 1.668151 GCAACTCCACGTCTCCACC 60.668 63.158 0.00 0.00 0.00 4.61
5089 5485 1.004918 CAACTCCACGTCTCCACCC 60.005 63.158 0.00 0.00 0.00 4.61
5090 5486 2.214920 AACTCCACGTCTCCACCCC 61.215 63.158 0.00 0.00 0.00 4.95
5091 5487 3.391382 CTCCACGTCTCCACCCCC 61.391 72.222 0.00 0.00 0.00 5.40
5092 5488 3.907027 CTCCACGTCTCCACCCCCT 62.907 68.421 0.00 0.00 0.00 4.79
5093 5489 3.391382 CCACGTCTCCACCCCCTC 61.391 72.222 0.00 0.00 0.00 4.30
5094 5490 3.391382 CACGTCTCCACCCCCTCC 61.391 72.222 0.00 0.00 0.00 4.30
5095 5491 3.923645 ACGTCTCCACCCCCTCCA 61.924 66.667 0.00 0.00 0.00 3.86
5096 5492 2.365635 CGTCTCCACCCCCTCCAT 60.366 66.667 0.00 0.00 0.00 3.41
5097 5493 2.435693 CGTCTCCACCCCCTCCATC 61.436 68.421 0.00 0.00 0.00 3.51
5098 5494 2.073101 GTCTCCACCCCCTCCATCC 61.073 68.421 0.00 0.00 0.00 3.51
5099 5495 2.042762 CTCCACCCCCTCCATCCA 59.957 66.667 0.00 0.00 0.00 3.41
5100 5496 2.042762 TCCACCCCCTCCATCCAG 59.957 66.667 0.00 0.00 0.00 3.86
5101 5497 3.813724 CCACCCCCTCCATCCAGC 61.814 72.222 0.00 0.00 0.00 4.85
5102 5498 3.813724 CACCCCCTCCATCCAGCC 61.814 72.222 0.00 0.00 0.00 4.85
5149 5545 4.990553 GCGCTTCCCCGGCCTATC 62.991 72.222 0.00 0.00 0.00 2.08
5150 5546 4.315941 CGCTTCCCCGGCCTATCC 62.316 72.222 0.00 0.00 0.00 2.59
5151 5547 3.955044 GCTTCCCCGGCCTATCCC 61.955 72.222 0.00 0.00 0.00 3.85
5152 5548 3.249961 CTTCCCCGGCCTATCCCC 61.250 72.222 0.00 0.00 0.00 4.81
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 3.406361 CCGTCGTGTCTGCACAGC 61.406 66.667 0.00 0.00 45.50 4.40
24 25 3.884581 TAGTCGTGCGTGTGCCGTC 62.885 63.158 0.00 0.00 41.78 4.79
28 29 0.937699 TCAGTTAGTCGTGCGTGTGC 60.938 55.000 0.00 0.00 43.20 4.57
116 117 2.426738 CGGATGTAGTACCACCCGTAAA 59.573 50.000 13.63 0.00 33.02 2.01
234 264 0.643820 GGATCGCGACGTTCGAAATT 59.356 50.000 12.93 0.00 43.74 1.82
263 293 1.484240 GATCCACTTGACCTCTCTGGG 59.516 57.143 0.00 0.00 41.11 4.45
413 448 1.834458 GCGCGGAAGTACAAAACGGT 61.834 55.000 8.83 0.00 0.00 4.83
445 480 1.444672 GTGGGGATGTACTACCGCC 59.555 63.158 17.68 13.13 38.15 6.13
448 483 0.688749 ACGGGTGGGGATGTACTACC 60.689 60.000 0.00 0.00 0.00 3.18
478 513 0.163146 GCGGAATTTATACGAGCGGC 59.837 55.000 0.00 0.00 0.00 6.53
479 514 0.433492 CGCGGAATTTATACGAGCGG 59.567 55.000 0.00 0.00 42.04 5.52
480 515 0.433492 CCGCGGAATTTATACGAGCG 59.567 55.000 24.07 0.00 44.82 5.03
481 516 0.163146 GCCGCGGAATTTATACGAGC 59.837 55.000 33.48 3.97 0.00 5.03
482 517 0.788391 GGCCGCGGAATTTATACGAG 59.212 55.000 33.48 0.00 0.00 4.18
483 518 0.600782 GGGCCGCGGAATTTATACGA 60.601 55.000 33.48 0.00 0.00 3.43
484 519 1.864176 GGGCCGCGGAATTTATACG 59.136 57.895 33.48 0.00 0.00 3.06
485 520 1.864176 CGGGCCGCGGAATTTATAC 59.136 57.895 33.48 8.16 0.00 1.47
516 551 3.276846 GGACACACACACCCACGC 61.277 66.667 0.00 0.00 0.00 5.34
550 589 3.488978 CGACTCGACTCGGCTCGT 61.489 66.667 6.58 0.00 35.10 4.18
567 606 4.873129 TGCCCGCTCGCTCGATTC 62.873 66.667 0.00 0.00 0.00 2.52
568 607 4.880537 CTGCCCGCTCGCTCGATT 62.881 66.667 0.00 0.00 0.00 3.34
600 640 2.362329 CTGGTTGCCAAAACCCACCG 62.362 60.000 4.86 0.00 39.54 4.94
653 693 1.206610 AGAACTCTGACGAGCATGCAT 59.793 47.619 21.98 4.40 41.09 3.96
654 694 0.605083 AGAACTCTGACGAGCATGCA 59.395 50.000 21.98 0.00 41.09 3.96
655 695 1.392853 CAAGAACTCTGACGAGCATGC 59.607 52.381 10.51 10.51 41.09 4.06
656 696 1.392853 GCAAGAACTCTGACGAGCATG 59.607 52.381 0.00 0.00 41.09 4.06
698 738 1.804748 GAAAATGGAAACGAGGCGTCT 59.195 47.619 4.69 0.00 39.99 4.18
704 744 2.076863 AGAGCGGAAAATGGAAACGAG 58.923 47.619 0.00 0.00 0.00 4.18
705 745 2.178912 AGAGCGGAAAATGGAAACGA 57.821 45.000 0.00 0.00 0.00 3.85
718 758 0.392193 AGCACATCAGGAAAGAGCGG 60.392 55.000 0.00 0.00 0.00 5.52
724 764 2.842496 AGAGGATCAGCACATCAGGAAA 59.158 45.455 0.00 0.00 37.82 3.13
727 767 1.761198 TGAGAGGATCAGCACATCAGG 59.239 52.381 0.00 0.00 37.82 3.86
728 768 2.431419 AGTGAGAGGATCAGCACATCAG 59.569 50.000 0.00 0.00 42.63 2.90
729 769 2.429971 GAGTGAGAGGATCAGCACATCA 59.570 50.000 0.00 0.00 42.63 3.07
730 770 2.543445 CGAGTGAGAGGATCAGCACATC 60.543 54.545 0.00 0.00 42.63 3.06
731 771 1.408340 CGAGTGAGAGGATCAGCACAT 59.592 52.381 0.00 0.00 42.63 3.21
732 772 0.813821 CGAGTGAGAGGATCAGCACA 59.186 55.000 0.00 0.00 42.63 4.57
735 775 2.165437 AGAAACGAGTGAGAGGATCAGC 59.835 50.000 0.00 0.00 39.07 4.26
736 776 4.172505 CAAGAAACGAGTGAGAGGATCAG 58.827 47.826 0.00 0.00 39.07 2.90
781 857 3.853475 CAAAGAAAGAATGGGTGCATCC 58.147 45.455 9.82 9.82 0.00 3.51
782 858 3.256558 GCAAAGAAAGAATGGGTGCATC 58.743 45.455 0.00 0.00 0.00 3.91
868 957 3.323979 AGGATGAACGTACTCCAACTGTT 59.676 43.478 12.04 0.00 0.00 3.16
905 994 0.756903 AGCAGTGGTAACGTGAAGGT 59.243 50.000 0.00 0.00 42.51 3.50
944 1033 2.189191 ATCAGGCGTCCATGTGCAGT 62.189 55.000 0.00 0.00 0.00 4.40
961 1053 8.713271 GCAGAAACAAATATAGTACTAGCCATC 58.287 37.037 8.85 0.00 0.00 3.51
972 1064 3.029074 GTGCGCGCAGAAACAAATATAG 58.971 45.455 37.44 0.00 0.00 1.31
1110 1429 1.160946 TCTTCTCGATCTCGCCGGAG 61.161 60.000 5.05 0.00 41.89 4.63
1515 1843 5.775268 TGAATTGGGGGTGATTGATTGATA 58.225 37.500 0.00 0.00 0.00 2.15
1650 1990 2.360852 CTTGTCCAGCCCCAGCAG 60.361 66.667 0.00 0.00 43.56 4.24
1813 2153 1.909700 AATGGGATCGTTTGTGCTGT 58.090 45.000 0.00 0.00 0.00 4.40
1817 2157 3.772932 CATGGAAATGGGATCGTTTGTG 58.227 45.455 0.00 0.00 32.71 3.33
1827 2167 1.731433 CGCAGGAGCATGGAAATGGG 61.731 60.000 0.00 0.00 42.27 4.00
2193 2548 0.386731 GGTTTCGCCACCAAATCGTG 60.387 55.000 0.00 0.00 36.73 4.35
2206 2564 3.775661 ACCTGAAAGTGTTTGGTTTCG 57.224 42.857 0.00 0.00 35.75 3.46
2290 2649 2.338809 TCTCCTTGAGGTGTGTGGAAT 58.661 47.619 0.00 0.00 36.34 3.01
2418 2779 2.475685 GCCATCCGTTTCTAAAGCGTTC 60.476 50.000 0.00 0.00 0.00 3.95
2608 2970 0.308376 GGCGTTACGTTTGCTTCCAA 59.692 50.000 6.63 0.00 0.00 3.53
2640 3008 6.738114 TGAAAATTGTTCAGCGAGAGAAAAT 58.262 32.000 0.00 0.00 0.00 1.82
2722 3094 1.369091 AAATCTGGCGACGGCATCAC 61.369 55.000 25.20 0.00 42.47 3.06
2727 3099 0.521735 AAGAAAAATCTGGCGACGGC 59.478 50.000 15.43 15.43 36.33 5.68
2879 3252 2.042259 CGCAGATGCCTTGGCTGAA 61.042 57.895 13.18 0.00 37.91 3.02
2962 3335 3.643792 ACTAGTCCTTGACAAGAACAGCT 59.356 43.478 16.99 8.88 34.60 4.24
2994 3367 3.133721 AGGGCACAGTCTAAGCTCTATTG 59.866 47.826 0.00 0.00 37.32 1.90
2995 3368 3.379452 AGGGCACAGTCTAAGCTCTATT 58.621 45.455 0.00 0.00 37.32 1.73
2996 3369 2.962421 GAGGGCACAGTCTAAGCTCTAT 59.038 50.000 0.00 0.00 39.65 1.98
2997 3370 2.379972 GAGGGCACAGTCTAAGCTCTA 58.620 52.381 0.00 0.00 39.65 2.43
2998 3371 1.190643 GAGGGCACAGTCTAAGCTCT 58.809 55.000 0.00 0.00 42.90 4.09
2999 3372 0.176910 GGAGGGCACAGTCTAAGCTC 59.823 60.000 0.00 0.00 0.00 4.09
3012 3385 0.463833 CCTGGACGTAAATGGAGGGC 60.464 60.000 0.00 0.00 0.00 5.19
3084 3457 0.970937 TGAGGGTGACGAGGATGACC 60.971 60.000 0.00 0.00 0.00 4.02
3148 3521 9.705290 AGAAATGCGTAAAACCTTATTCATTTT 57.295 25.926 0.00 0.00 34.94 1.82
3151 3524 8.519526 TCAAGAAATGCGTAAAACCTTATTCAT 58.480 29.630 0.00 0.00 0.00 2.57
3153 3526 8.798153 CATCAAGAAATGCGTAAAACCTTATTC 58.202 33.333 0.00 0.00 0.00 1.75
3154 3527 8.303876 ACATCAAGAAATGCGTAAAACCTTATT 58.696 29.630 0.00 0.00 0.00 1.40
3155 3528 7.826690 ACATCAAGAAATGCGTAAAACCTTAT 58.173 30.769 0.00 0.00 0.00 1.73
3156 3529 7.209471 ACATCAAGAAATGCGTAAAACCTTA 57.791 32.000 0.00 0.00 0.00 2.69
3157 3530 6.084326 ACATCAAGAAATGCGTAAAACCTT 57.916 33.333 0.00 0.00 0.00 3.50
3160 3533 8.721476 CGTAATACATCAAGAAATGCGTAAAAC 58.279 33.333 0.00 0.00 0.00 2.43
3161 3534 7.906010 CCGTAATACATCAAGAAATGCGTAAAA 59.094 33.333 0.00 0.00 0.00 1.52
3162 3535 7.278203 TCCGTAATACATCAAGAAATGCGTAAA 59.722 33.333 0.00 0.00 0.00 2.01
3163 3536 6.757478 TCCGTAATACATCAAGAAATGCGTAA 59.243 34.615 0.00 0.00 0.00 3.18
3164 3537 6.274579 TCCGTAATACATCAAGAAATGCGTA 58.725 36.000 0.00 0.00 0.00 4.42
3165 3538 5.113383 TCCGTAATACATCAAGAAATGCGT 58.887 37.500 0.00 0.00 0.00 5.24
3166 3539 5.651172 TCCGTAATACATCAAGAAATGCG 57.349 39.130 0.00 0.00 0.00 4.73
3167 3540 7.189693 TCATCCGTAATACATCAAGAAATGC 57.810 36.000 0.00 0.00 0.00 3.56
3168 3541 8.070171 GGTTCATCCGTAATACATCAAGAAATG 58.930 37.037 0.00 0.00 0.00 2.32
3169 3542 7.773224 TGGTTCATCCGTAATACATCAAGAAAT 59.227 33.333 0.00 0.00 39.52 2.17
3170 3543 7.106890 TGGTTCATCCGTAATACATCAAGAAA 58.893 34.615 0.00 0.00 39.52 2.52
3174 3547 5.762711 CCATGGTTCATCCGTAATACATCAA 59.237 40.000 2.57 0.00 39.52 2.57
3175 3548 5.304778 CCATGGTTCATCCGTAATACATCA 58.695 41.667 2.57 0.00 39.52 3.07
3177 3550 4.104102 ACCCATGGTTCATCCGTAATACAT 59.896 41.667 11.73 0.00 39.52 2.29
3179 3552 3.813166 CACCCATGGTTCATCCGTAATAC 59.187 47.826 11.73 0.00 39.52 1.89
3180 3553 3.746114 GCACCCATGGTTCATCCGTAATA 60.746 47.826 11.73 0.00 39.52 0.98
3181 3554 2.930950 CACCCATGGTTCATCCGTAAT 58.069 47.619 11.73 0.00 39.52 1.89
3184 3557 1.378514 GCACCCATGGTTCATCCGT 60.379 57.895 11.73 0.00 39.52 4.69
3185 3558 1.077501 AGCACCCATGGTTCATCCG 60.078 57.895 11.73 0.00 39.52 4.18
3186 3559 0.034186 TCAGCACCCATGGTTCATCC 60.034 55.000 11.73 0.00 33.06 3.51
3187 3560 1.098050 GTCAGCACCCATGGTTCATC 58.902 55.000 11.73 0.00 33.06 2.92
3198 3587 0.671781 CACCAGCTACTGTCAGCACC 60.672 60.000 0.00 0.00 44.35 5.01
3199 3588 1.294659 GCACCAGCTACTGTCAGCAC 61.295 60.000 0.00 0.00 44.35 4.40
3208 3597 0.169672 CAATGCAGTGCACCAGCTAC 59.830 55.000 22.44 7.28 43.04 3.58
3209 3598 0.961857 CCAATGCAGTGCACCAGCTA 60.962 55.000 22.44 16.07 43.04 3.32
3210 3599 2.273179 CCAATGCAGTGCACCAGCT 61.273 57.895 22.44 0.00 43.04 4.24
3211 3600 2.260434 CCAATGCAGTGCACCAGC 59.740 61.111 22.44 21.28 43.04 4.85
3212 3601 2.260434 GCCAATGCAGTGCACCAG 59.740 61.111 22.44 12.72 43.04 4.00
3213 3602 2.521224 TGCCAATGCAGTGCACCA 60.521 55.556 22.44 12.40 44.23 4.17
3226 3615 3.672447 CGCCACTGCACAATGCCA 61.672 61.111 0.00 0.00 44.23 4.92
3235 3624 2.512515 GTCCTCATCCGCCACTGC 60.513 66.667 0.00 0.00 0.00 4.40
3236 3625 1.142748 GAGTCCTCATCCGCCACTG 59.857 63.158 0.00 0.00 0.00 3.66
3312 3701 4.143333 CCGGCGTAGGTCACCCAG 62.143 72.222 6.01 0.00 0.00 4.45
3428 3817 2.664851 CGTTGCAGAACCCGAGCA 60.665 61.111 0.00 0.00 36.32 4.26
3462 3851 2.332063 ATCCCATGTTCATGTCGGTC 57.668 50.000 11.13 0.00 0.00 4.79
3480 3869 1.677820 GCCACCTTGCCGTAGTTGTAT 60.678 52.381 0.00 0.00 0.00 2.29
3879 4268 1.262640 GGAAGTCCCTCGCCAGGTTA 61.263 60.000 0.00 0.00 38.30 2.85
4095 4484 3.909258 GAGCAGCGACGACGGGAAA 62.909 63.158 9.67 0.00 40.15 3.13
4180 4569 4.498513 CCGCCTATGTAATCTGACGTTGTA 60.499 45.833 0.00 0.00 0.00 2.41
4260 4654 1.687123 ACCCGGCATCACTCTATGTAC 59.313 52.381 0.00 0.00 0.00 2.90
4352 4746 3.807622 TGTTCTCGTCGCTCTGAAAATTT 59.192 39.130 0.00 0.00 0.00 1.82
4414 4808 9.458374 GAGATTCTCTAAGAAACGAAGATAAGG 57.542 37.037 6.42 0.00 37.82 2.69
4544 4938 6.029607 TGTAAGTTATACTCCGTTAAGTGCG 58.970 40.000 0.00 0.00 0.00 5.34
4566 4960 3.973657 ACGAAGTGTACGAGTCAAATGT 58.026 40.909 0.00 0.00 42.51 2.71
4582 4976 2.578178 CTGCTCGCCTCGACGAAG 60.578 66.667 0.00 0.00 42.39 3.79
4583 4977 4.116328 CCTGCTCGCCTCGACGAA 62.116 66.667 0.00 0.00 42.39 3.85
4666 5062 2.160219 GCAGCGAGAAACAACATGATGA 59.840 45.455 10.29 0.00 0.00 2.92
4667 5063 2.512885 GCAGCGAGAAACAACATGATG 58.487 47.619 0.00 0.00 0.00 3.07
4668 5064 1.470098 GGCAGCGAGAAACAACATGAT 59.530 47.619 0.00 0.00 0.00 2.45
4669 5065 0.874390 GGCAGCGAGAAACAACATGA 59.126 50.000 0.00 0.00 0.00 3.07
4670 5066 0.453282 CGGCAGCGAGAAACAACATG 60.453 55.000 0.00 0.00 0.00 3.21
4671 5067 1.868997 CGGCAGCGAGAAACAACAT 59.131 52.632 0.00 0.00 0.00 2.71
4672 5068 2.892334 GCGGCAGCGAGAAACAACA 61.892 57.895 0.00 0.00 0.00 3.33
4673 5069 2.127232 GCGGCAGCGAGAAACAAC 60.127 61.111 0.00 0.00 0.00 3.32
4690 5086 2.762969 TTTCACCCGGGGAGCACATG 62.763 60.000 27.92 12.45 0.00 3.21
4691 5087 2.484287 CTTTCACCCGGGGAGCACAT 62.484 60.000 27.92 0.00 0.00 3.21
4692 5088 3.172106 TTTCACCCGGGGAGCACA 61.172 61.111 27.92 0.00 0.00 4.57
4693 5089 2.359975 CTTTCACCCGGGGAGCAC 60.360 66.667 27.92 0.00 0.00 4.40
4694 5090 2.528127 TCTTTCACCCGGGGAGCA 60.528 61.111 27.92 4.08 0.00 4.26
4695 5091 2.046217 GTCTTTCACCCGGGGAGC 60.046 66.667 27.92 9.30 0.00 4.70
4696 5092 2.227089 CTCGTCTTTCACCCGGGGAG 62.227 65.000 27.92 17.66 0.00 4.30
4697 5093 2.203669 TCGTCTTTCACCCGGGGA 60.204 61.111 27.92 16.78 0.00 4.81
4698 5094 2.264794 CTCGTCTTTCACCCGGGG 59.735 66.667 27.92 12.73 0.00 5.73
4699 5095 2.434359 GCTCGTCTTTCACCCGGG 60.434 66.667 22.25 22.25 0.00 5.73
4700 5096 2.434359 GGCTCGTCTTTCACCCGG 60.434 66.667 0.00 0.00 0.00 5.73
4701 5097 2.809601 CGGCTCGTCTTTCACCCG 60.810 66.667 0.00 0.00 0.00 5.28
4702 5098 3.119096 GCGGCTCGTCTTTCACCC 61.119 66.667 0.00 0.00 0.00 4.61
4703 5099 3.119096 GGCGGCTCGTCTTTCACC 61.119 66.667 0.00 0.00 0.00 4.02
4704 5100 3.119096 GGGCGGCTCGTCTTTCAC 61.119 66.667 9.56 0.00 0.00 3.18
4705 5101 4.388499 GGGGCGGCTCGTCTTTCA 62.388 66.667 9.56 0.00 0.00 2.69
4706 5102 3.607370 AAGGGGCGGCTCGTCTTTC 62.607 63.158 9.56 0.00 0.00 2.62
4707 5103 3.637273 AAGGGGCGGCTCGTCTTT 61.637 61.111 9.56 0.00 0.00 2.52
4708 5104 4.394712 CAAGGGGCGGCTCGTCTT 62.395 66.667 9.56 5.33 0.00 3.01
4733 5129 3.121030 CTCCTTGCGTCCGCCAAG 61.121 66.667 9.43 11.85 41.09 3.61
4734 5130 4.697756 CCTCCTTGCGTCCGCCAA 62.698 66.667 9.43 3.17 41.09 4.52
4736 5132 4.699522 AACCTCCTTGCGTCCGCC 62.700 66.667 9.43 0.00 41.09 6.13
4737 5133 3.423154 CAACCTCCTTGCGTCCGC 61.423 66.667 4.42 4.42 42.35 5.54
4738 5134 2.742372 CCAACCTCCTTGCGTCCG 60.742 66.667 0.00 0.00 0.00 4.79
4739 5135 3.056328 GCCAACCTCCTTGCGTCC 61.056 66.667 0.00 0.00 0.00 4.79
4740 5136 3.423154 CGCCAACCTCCTTGCGTC 61.423 66.667 0.00 0.00 0.00 5.19
4744 5140 4.697756 TCGGCGCCAACCTCCTTG 62.698 66.667 28.98 6.54 0.00 3.61
4745 5141 3.901797 CTTCGGCGCCAACCTCCTT 62.902 63.158 28.98 0.00 0.00 3.36
4746 5142 4.394712 CTTCGGCGCCAACCTCCT 62.395 66.667 28.98 0.00 0.00 3.69
4747 5143 3.305177 TACTTCGGCGCCAACCTCC 62.305 63.158 28.98 0.00 0.00 4.30
4748 5144 1.810030 CTACTTCGGCGCCAACCTC 60.810 63.158 28.98 0.00 0.00 3.85
4749 5145 1.614241 ATCTACTTCGGCGCCAACCT 61.614 55.000 28.98 8.15 0.00 3.50
4750 5146 1.153429 ATCTACTTCGGCGCCAACC 60.153 57.895 28.98 0.00 0.00 3.77
4751 5147 2.006772 CATCTACTTCGGCGCCAAC 58.993 57.895 28.98 0.00 0.00 3.77
4752 5148 1.813753 GCATCTACTTCGGCGCCAA 60.814 57.895 28.98 18.27 0.00 4.52
4753 5149 2.202878 GCATCTACTTCGGCGCCA 60.203 61.111 28.98 11.20 0.00 5.69
4754 5150 3.330853 CGCATCTACTTCGGCGCC 61.331 66.667 19.07 19.07 43.14 6.53
4758 5154 2.658593 CGGCCGCATCTACTTCGG 60.659 66.667 14.67 0.00 45.46 4.30
4759 5155 1.658717 CTCGGCCGCATCTACTTCG 60.659 63.158 23.51 0.00 0.00 3.79
4760 5156 1.951631 GCTCGGCCGCATCTACTTC 60.952 63.158 23.51 0.00 0.00 3.01
4761 5157 2.107141 GCTCGGCCGCATCTACTT 59.893 61.111 23.51 0.00 0.00 2.24
4762 5158 4.271816 CGCTCGGCCGCATCTACT 62.272 66.667 23.51 0.00 0.00 2.57
4763 5159 3.559657 ATCGCTCGGCCGCATCTAC 62.560 63.158 23.51 4.49 0.00 2.59
4764 5160 3.295273 ATCGCTCGGCCGCATCTA 61.295 61.111 23.51 0.55 0.00 1.98
4765 5161 4.957684 CATCGCTCGGCCGCATCT 62.958 66.667 23.51 0.00 0.00 2.90
4772 5168 4.838152 TCTTGCCCATCGCTCGGC 62.838 66.667 0.00 0.00 45.92 5.54
4773 5169 1.524621 ATTCTTGCCCATCGCTCGG 60.525 57.895 0.00 0.00 38.78 4.63
4774 5170 1.645455 CATTCTTGCCCATCGCTCG 59.355 57.895 0.00 0.00 38.78 5.03
4775 5171 0.464373 TCCATTCTTGCCCATCGCTC 60.464 55.000 0.00 0.00 38.78 5.03
4776 5172 0.465097 CTCCATTCTTGCCCATCGCT 60.465 55.000 0.00 0.00 38.78 4.93
4777 5173 1.450531 CCTCCATTCTTGCCCATCGC 61.451 60.000 0.00 0.00 38.31 4.58
4778 5174 0.181114 TCCTCCATTCTTGCCCATCG 59.819 55.000 0.00 0.00 0.00 3.84
4779 5175 2.442236 TTCCTCCATTCTTGCCCATC 57.558 50.000 0.00 0.00 0.00 3.51
4780 5176 2.925966 TTTCCTCCATTCTTGCCCAT 57.074 45.000 0.00 0.00 0.00 4.00
4781 5177 2.692709 TTTTCCTCCATTCTTGCCCA 57.307 45.000 0.00 0.00 0.00 5.36
4812 5208 0.765903 TCATCCTCCATGGCCTCTCC 60.766 60.000 6.96 0.00 35.26 3.71
4813 5209 1.135094 TTCATCCTCCATGGCCTCTC 58.865 55.000 6.96 0.00 35.26 3.20
4814 5210 1.830486 ATTCATCCTCCATGGCCTCT 58.170 50.000 6.96 0.00 35.26 3.69
4815 5211 2.671896 AATTCATCCTCCATGGCCTC 57.328 50.000 6.96 0.00 35.26 4.70
4816 5212 4.313020 GATAATTCATCCTCCATGGCCT 57.687 45.455 6.96 0.00 35.26 5.19
4827 5223 5.855045 ACGGTTAGTGGAGGATAATTCATC 58.145 41.667 0.00 0.00 31.87 2.92
4828 5224 5.888982 ACGGTTAGTGGAGGATAATTCAT 57.111 39.130 0.00 0.00 0.00 2.57
4829 5225 5.687166 AACGGTTAGTGGAGGATAATTCA 57.313 39.130 0.00 0.00 0.00 2.57
4830 5226 9.420551 CTTATAACGGTTAGTGGAGGATAATTC 57.579 37.037 6.74 0.00 0.00 2.17
4831 5227 7.876582 GCTTATAACGGTTAGTGGAGGATAATT 59.123 37.037 6.74 0.00 0.00 1.40
4832 5228 7.015877 TGCTTATAACGGTTAGTGGAGGATAAT 59.984 37.037 6.74 0.00 0.00 1.28
4833 5229 6.324512 TGCTTATAACGGTTAGTGGAGGATAA 59.675 38.462 6.74 0.00 0.00 1.75
4834 5230 5.834742 TGCTTATAACGGTTAGTGGAGGATA 59.165 40.000 6.74 0.00 0.00 2.59
4835 5231 4.652421 TGCTTATAACGGTTAGTGGAGGAT 59.348 41.667 6.74 0.00 0.00 3.24
4836 5232 4.025360 TGCTTATAACGGTTAGTGGAGGA 58.975 43.478 6.74 0.86 0.00 3.71
4837 5233 4.395959 TGCTTATAACGGTTAGTGGAGG 57.604 45.455 6.74 0.00 0.00 4.30
4838 5234 6.201044 CAGATTGCTTATAACGGTTAGTGGAG 59.799 42.308 6.74 3.26 0.00 3.86
4839 5235 6.046593 CAGATTGCTTATAACGGTTAGTGGA 58.953 40.000 6.74 0.00 0.00 4.02
4840 5236 5.815740 ACAGATTGCTTATAACGGTTAGTGG 59.184 40.000 6.74 0.60 0.00 4.00
4841 5237 6.903883 ACAGATTGCTTATAACGGTTAGTG 57.096 37.500 6.74 0.89 0.00 2.74
4842 5238 8.472413 TCTAACAGATTGCTTATAACGGTTAGT 58.528 33.333 15.78 0.00 37.50 2.24
4843 5239 8.867112 TCTAACAGATTGCTTATAACGGTTAG 57.133 34.615 6.74 12.67 37.55 2.34
4844 5240 7.437267 GCTCTAACAGATTGCTTATAACGGTTA 59.563 37.037 2.62 2.62 0.00 2.85
4845 5241 6.258068 GCTCTAACAGATTGCTTATAACGGTT 59.742 38.462 0.00 0.00 0.00 4.44
4846 5242 5.753921 GCTCTAACAGATTGCTTATAACGGT 59.246 40.000 0.00 0.00 0.00 4.83
4847 5243 5.753438 TGCTCTAACAGATTGCTTATAACGG 59.247 40.000 0.00 0.00 0.00 4.44
4848 5244 6.828502 TGCTCTAACAGATTGCTTATAACG 57.171 37.500 0.00 0.00 0.00 3.18
4849 5245 8.600449 AGATGCTCTAACAGATTGCTTATAAC 57.400 34.615 0.00 0.00 0.00 1.89
4850 5246 7.875041 GGAGATGCTCTAACAGATTGCTTATAA 59.125 37.037 0.00 0.00 0.00 0.98
4851 5247 7.015584 TGGAGATGCTCTAACAGATTGCTTATA 59.984 37.037 0.00 0.00 0.00 0.98
4852 5248 6.183361 TGGAGATGCTCTAACAGATTGCTTAT 60.183 38.462 0.00 0.00 0.00 1.73
4853 5249 5.129320 TGGAGATGCTCTAACAGATTGCTTA 59.871 40.000 0.00 0.00 0.00 3.09
4854 5250 4.080695 TGGAGATGCTCTAACAGATTGCTT 60.081 41.667 0.00 0.00 0.00 3.91
4855 5251 3.453717 TGGAGATGCTCTAACAGATTGCT 59.546 43.478 0.00 0.00 0.00 3.91
4856 5252 3.801698 TGGAGATGCTCTAACAGATTGC 58.198 45.455 0.00 0.00 0.00 3.56
4857 5253 5.731599 GTTGGAGATGCTCTAACAGATTG 57.268 43.478 15.79 0.00 46.43 2.67
4864 5260 2.935238 GCGGTTGTTGGAGATGCTCTAA 60.935 50.000 0.00 0.00 0.00 2.10
4865 5261 1.405526 GCGGTTGTTGGAGATGCTCTA 60.406 52.381 0.00 0.00 0.00 2.43
4866 5262 0.674895 GCGGTTGTTGGAGATGCTCT 60.675 55.000 0.00 0.00 0.00 4.09
4867 5263 1.796796 GCGGTTGTTGGAGATGCTC 59.203 57.895 0.00 0.00 0.00 4.26
4868 5264 2.034879 CGCGGTTGTTGGAGATGCT 61.035 57.895 0.00 0.00 0.00 3.79
4869 5265 2.480555 CGCGGTTGTTGGAGATGC 59.519 61.111 0.00 0.00 0.00 3.91
4870 5266 0.739462 TAGCGCGGTTGTTGGAGATG 60.739 55.000 19.09 0.00 0.00 2.90
4871 5267 0.036765 TTAGCGCGGTTGTTGGAGAT 60.037 50.000 19.09 0.00 0.00 2.75
4872 5268 0.249953 TTTAGCGCGGTTGTTGGAGA 60.250 50.000 19.09 0.00 0.00 3.71
4873 5269 0.110373 GTTTAGCGCGGTTGTTGGAG 60.110 55.000 19.09 0.00 0.00 3.86
4874 5270 0.814410 TGTTTAGCGCGGTTGTTGGA 60.814 50.000 19.09 0.00 0.00 3.53
4875 5271 0.029567 TTGTTTAGCGCGGTTGTTGG 59.970 50.000 19.09 0.00 0.00 3.77
4876 5272 1.394697 CTTGTTTAGCGCGGTTGTTG 58.605 50.000 19.09 0.00 0.00 3.33
4877 5273 0.317519 GCTTGTTTAGCGCGGTTGTT 60.318 50.000 19.09 0.00 40.71 2.83
4878 5274 1.281656 GCTTGTTTAGCGCGGTTGT 59.718 52.632 19.09 0.00 40.71 3.32
4879 5275 4.130857 GCTTGTTTAGCGCGGTTG 57.869 55.556 19.09 1.47 40.71 3.77
4886 5282 2.501865 GTGCGGCGCTTGTTTAGC 60.502 61.111 33.26 8.72 46.83 3.09
4887 5283 2.175811 GGTGCGGCGCTTGTTTAG 59.824 61.111 33.26 0.00 0.00 1.85
4888 5284 3.718097 CGGTGCGGCGCTTGTTTA 61.718 61.111 33.26 8.58 0.00 2.01
4896 5292 3.468841 CAATTTTGCGGTGCGGCG 61.469 61.111 0.51 0.51 35.06 6.46
4897 5293 2.355718 ACAATTTTGCGGTGCGGC 60.356 55.556 0.00 0.00 0.00 6.53
4898 5294 1.732683 GGACAATTTTGCGGTGCGG 60.733 57.895 0.00 0.00 0.00 5.69
4899 5295 0.388391 ATGGACAATTTTGCGGTGCG 60.388 50.000 0.00 0.00 0.00 5.34
4900 5296 1.794512 AATGGACAATTTTGCGGTGC 58.205 45.000 0.00 0.00 0.00 5.01
4901 5297 3.388308 TGAAATGGACAATTTTGCGGTG 58.612 40.909 0.00 0.00 38.64 4.94
4902 5298 3.652274 CTGAAATGGACAATTTTGCGGT 58.348 40.909 0.00 0.00 38.64 5.68
4903 5299 2.412770 GCTGAAATGGACAATTTTGCGG 59.587 45.455 0.00 0.00 38.64 5.69
4904 5300 2.090967 CGCTGAAATGGACAATTTTGCG 59.909 45.455 16.58 16.58 45.55 4.85
4905 5301 2.159801 GCGCTGAAATGGACAATTTTGC 60.160 45.455 0.00 0.00 38.64 3.68
4906 5302 2.090967 CGCGCTGAAATGGACAATTTTG 59.909 45.455 5.56 0.00 38.64 2.44
4907 5303 2.327568 CGCGCTGAAATGGACAATTTT 58.672 42.857 5.56 0.00 38.64 1.82
4908 5304 1.981254 CGCGCTGAAATGGACAATTT 58.019 45.000 5.56 0.00 41.33 1.82
4909 5305 0.456653 GCGCGCTGAAATGGACAATT 60.457 50.000 26.67 0.00 0.00 2.32
4910 5306 1.137404 GCGCGCTGAAATGGACAAT 59.863 52.632 26.67 0.00 0.00 2.71
4911 5307 2.560861 GCGCGCTGAAATGGACAA 59.439 55.556 26.67 0.00 0.00 3.18
4912 5308 3.787676 CGCGCGCTGAAATGGACA 61.788 61.111 30.48 0.00 0.00 4.02
4923 5319 2.000323 CTATCAATTGTGCGCGCGC 61.000 57.895 45.02 45.02 42.35 6.86
4924 5320 0.382272 CTCTATCAATTGTGCGCGCG 60.382 55.000 28.44 28.44 0.00 6.86
4925 5321 0.652592 ACTCTATCAATTGTGCGCGC 59.347 50.000 27.26 27.26 0.00 6.86
4926 5322 1.004610 CCACTCTATCAATTGTGCGCG 60.005 52.381 0.00 0.00 0.00 6.86
4927 5323 2.009774 ACCACTCTATCAATTGTGCGC 58.990 47.619 0.00 0.00 0.00 6.09
4928 5324 3.063997 GGAACCACTCTATCAATTGTGCG 59.936 47.826 5.13 0.00 0.00 5.34
4929 5325 4.009675 TGGAACCACTCTATCAATTGTGC 58.990 43.478 5.13 0.00 0.00 4.57
4930 5326 4.095483 GCTGGAACCACTCTATCAATTGTG 59.905 45.833 5.13 0.00 0.00 3.33
4931 5327 4.265073 GCTGGAACCACTCTATCAATTGT 58.735 43.478 5.13 0.00 0.00 2.71
4932 5328 3.310774 CGCTGGAACCACTCTATCAATTG 59.689 47.826 0.00 0.00 0.00 2.32
4933 5329 3.535561 CGCTGGAACCACTCTATCAATT 58.464 45.455 0.00 0.00 0.00 2.32
4934 5330 2.158900 CCGCTGGAACCACTCTATCAAT 60.159 50.000 0.00 0.00 0.00 2.57
4935 5331 1.207089 CCGCTGGAACCACTCTATCAA 59.793 52.381 0.00 0.00 0.00 2.57
4936 5332 0.824109 CCGCTGGAACCACTCTATCA 59.176 55.000 0.00 0.00 0.00 2.15
4937 5333 0.105039 CCCGCTGGAACCACTCTATC 59.895 60.000 0.00 0.00 0.00 2.08
4938 5334 1.972660 GCCCGCTGGAACCACTCTAT 61.973 60.000 0.00 0.00 0.00 1.98
4939 5335 2.656069 GCCCGCTGGAACCACTCTA 61.656 63.158 0.00 0.00 0.00 2.43
4940 5336 4.021925 GCCCGCTGGAACCACTCT 62.022 66.667 0.00 0.00 0.00 3.24
4949 5345 4.277593 TTTTTGTGCGCCCGCTGG 62.278 61.111 14.13 0.00 42.51 4.85
4950 5346 3.029735 GTTTTTGTGCGCCCGCTG 61.030 61.111 14.13 0.00 42.51 5.18
4951 5347 4.279043 GGTTTTTGTGCGCCCGCT 62.279 61.111 14.13 0.00 42.51 5.52
4970 5366 3.059472 CTAGATATTGCCGCGCGCG 62.059 63.158 43.73 43.73 42.08 6.86
4971 5367 1.557443 AACTAGATATTGCCGCGCGC 61.557 55.000 27.36 23.91 38.31 6.86
4972 5368 0.435008 GAACTAGATATTGCCGCGCG 59.565 55.000 25.67 25.67 0.00 6.86
4973 5369 1.457303 CTGAACTAGATATTGCCGCGC 59.543 52.381 0.00 0.00 0.00 6.86
4974 5370 1.457303 GCTGAACTAGATATTGCCGCG 59.543 52.381 0.00 0.00 0.00 6.46
4975 5371 1.457303 CGCTGAACTAGATATTGCCGC 59.543 52.381 0.00 0.00 0.00 6.53
4976 5372 1.457303 GCGCTGAACTAGATATTGCCG 59.543 52.381 0.00 0.00 0.00 5.69
4977 5373 1.457303 CGCGCTGAACTAGATATTGCC 59.543 52.381 5.56 0.00 0.00 4.52
4978 5374 1.136502 GCGCGCTGAACTAGATATTGC 60.137 52.381 26.67 0.00 0.00 3.56
4979 5375 1.123217 CGCGCGCTGAACTAGATATTG 59.877 52.381 30.48 3.74 0.00 1.90
4980 5376 1.409412 CGCGCGCTGAACTAGATATT 58.591 50.000 30.48 0.00 0.00 1.28
4981 5377 0.387367 CCGCGCGCTGAACTAGATAT 60.387 55.000 30.48 0.00 0.00 1.63
4982 5378 1.008881 CCGCGCGCTGAACTAGATA 60.009 57.895 30.48 0.00 0.00 1.98
4983 5379 2.278857 CCGCGCGCTGAACTAGAT 60.279 61.111 30.48 0.00 0.00 1.98
4984 5380 4.492160 CCCGCGCGCTGAACTAGA 62.492 66.667 30.48 0.00 0.00 2.43
4985 5381 3.774959 ATCCCGCGCGCTGAACTAG 62.775 63.158 30.48 11.45 0.00 2.57
4986 5382 3.833645 ATCCCGCGCGCTGAACTA 61.834 61.111 30.48 9.27 0.00 2.24
4989 5385 4.751093 TTCATCCCGCGCGCTGAA 62.751 61.111 30.48 26.89 0.00 3.02
4990 5386 4.751093 TTTCATCCCGCGCGCTGA 62.751 61.111 30.48 24.72 0.00 4.26
4991 5387 4.520846 GTTTCATCCCGCGCGCTG 62.521 66.667 30.48 23.42 0.00 5.18
4992 5388 4.760047 AGTTTCATCCCGCGCGCT 62.760 61.111 30.48 10.73 0.00 5.92
4993 5389 3.718480 GAAGTTTCATCCCGCGCGC 62.718 63.158 27.36 23.91 0.00 6.86
4994 5390 1.705337 ATGAAGTTTCATCCCGCGCG 61.705 55.000 25.67 25.67 44.17 6.86
4995 5391 2.098293 ATGAAGTTTCATCCCGCGC 58.902 52.632 0.00 0.00 44.17 6.86
5003 5399 3.022401 GCGGCGCGATGAAGTTTCA 62.022 57.895 19.09 0.00 42.14 2.69
5004 5400 2.240612 AAGCGGCGCGATGAAGTTTC 62.241 55.000 27.59 0.00 0.00 2.78
5005 5401 1.017177 TAAGCGGCGCGATGAAGTTT 61.017 50.000 27.59 14.87 0.00 2.66
5006 5402 0.810031 ATAAGCGGCGCGATGAAGTT 60.810 50.000 27.59 15.64 0.00 2.66
5007 5403 0.810031 AATAAGCGGCGCGATGAAGT 60.810 50.000 27.59 3.49 0.00 3.01
5008 5404 0.304705 AAATAAGCGGCGCGATGAAG 59.695 50.000 27.59 0.00 0.00 3.02
5009 5405 0.027455 CAAATAAGCGGCGCGATGAA 59.973 50.000 27.59 11.57 0.00 2.57
5010 5406 1.087202 ACAAATAAGCGGCGCGATGA 61.087 50.000 27.59 13.32 0.00 2.92
5011 5407 0.248054 AACAAATAAGCGGCGCGATG 60.248 50.000 27.59 22.02 0.00 3.84
5012 5408 0.248054 CAACAAATAAGCGGCGCGAT 60.248 50.000 27.59 20.73 0.00 4.58
5013 5409 1.133664 CAACAAATAAGCGGCGCGA 59.866 52.632 27.59 19.26 0.00 5.87
5014 5410 2.496257 GCAACAAATAAGCGGCGCG 61.496 57.895 27.59 13.64 0.00 6.86
5015 5411 3.373278 GCAACAAATAAGCGGCGC 58.627 55.556 26.86 26.86 0.00 6.53
5020 5416 2.158330 GCGGGCGCAACAAATAAGC 61.158 57.895 10.83 0.00 41.49 3.09
5021 5417 0.523335 GAGCGGGCGCAACAAATAAG 60.523 55.000 10.83 0.00 44.88 1.73
5022 5418 1.504446 GAGCGGGCGCAACAAATAA 59.496 52.632 10.83 0.00 44.88 1.40
5023 5419 2.403378 GGAGCGGGCGCAACAAATA 61.403 57.895 10.83 0.00 44.88 1.40
5024 5420 3.747976 GGAGCGGGCGCAACAAAT 61.748 61.111 10.83 0.00 44.88 2.32
5043 5439 3.184683 CTTGAGAGTCCAGCGCGC 61.185 66.667 26.66 26.66 0.00 6.86
5044 5440 3.184683 GCTTGAGAGTCCAGCGCG 61.185 66.667 0.00 0.00 0.00 6.86
5045 5441 3.184683 CGCTTGAGAGTCCAGCGC 61.185 66.667 14.04 0.00 41.94 5.92
5047 5443 1.809209 GAGCGCTTGAGAGTCCAGC 60.809 63.158 13.26 0.00 0.00 4.85
5048 5444 1.515952 CGAGCGCTTGAGAGTCCAG 60.516 63.158 20.57 0.00 0.00 3.86
5049 5445 2.568612 CGAGCGCTTGAGAGTCCA 59.431 61.111 20.57 0.00 0.00 4.02
5050 5446 2.883253 GCGAGCGCTTGAGAGTCC 60.883 66.667 29.00 5.35 38.26 3.85
5062 5458 3.482783 GTGGAGTTGCGAGCGAGC 61.483 66.667 0.00 0.00 37.71 5.03
5063 5459 3.175240 CGTGGAGTTGCGAGCGAG 61.175 66.667 0.00 0.00 0.00 5.03
5064 5460 3.891586 GACGTGGAGTTGCGAGCGA 62.892 63.158 0.00 0.00 0.00 4.93
5065 5461 3.470567 GACGTGGAGTTGCGAGCG 61.471 66.667 0.00 0.00 0.00 5.03
5066 5462 2.049063 AGACGTGGAGTTGCGAGC 60.049 61.111 0.00 0.00 0.00 5.03
5067 5463 1.444553 GGAGACGTGGAGTTGCGAG 60.445 63.158 0.00 0.00 0.00 5.03
5068 5464 2.197605 TGGAGACGTGGAGTTGCGA 61.198 57.895 0.00 0.00 0.00 5.10
5069 5465 2.022129 GTGGAGACGTGGAGTTGCG 61.022 63.158 0.00 0.00 0.00 4.85
5070 5466 1.668151 GGTGGAGACGTGGAGTTGC 60.668 63.158 0.00 0.00 0.00 4.17
5071 5467 1.004918 GGGTGGAGACGTGGAGTTG 60.005 63.158 0.00 0.00 0.00 3.16
5072 5468 2.214920 GGGGTGGAGACGTGGAGTT 61.215 63.158 0.00 0.00 0.00 3.01
5073 5469 2.603776 GGGGTGGAGACGTGGAGT 60.604 66.667 0.00 0.00 0.00 3.85
5074 5470 3.391382 GGGGGTGGAGACGTGGAG 61.391 72.222 0.00 0.00 0.00 3.86
5075 5471 3.899545 GAGGGGGTGGAGACGTGGA 62.900 68.421 0.00 0.00 0.00 4.02
5076 5472 3.391382 GAGGGGGTGGAGACGTGG 61.391 72.222 0.00 0.00 0.00 4.94
5077 5473 3.391382 GGAGGGGGTGGAGACGTG 61.391 72.222 0.00 0.00 0.00 4.49
5078 5474 3.254035 ATGGAGGGGGTGGAGACGT 62.254 63.158 0.00 0.00 0.00 4.34
5079 5475 2.365635 ATGGAGGGGGTGGAGACG 60.366 66.667 0.00 0.00 0.00 4.18
5080 5476 2.073101 GGATGGAGGGGGTGGAGAC 61.073 68.421 0.00 0.00 0.00 3.36
5081 5477 2.372688 GGATGGAGGGGGTGGAGA 59.627 66.667 0.00 0.00 0.00 3.71
5082 5478 2.042762 TGGATGGAGGGGGTGGAG 59.957 66.667 0.00 0.00 0.00 3.86
5083 5479 2.042762 CTGGATGGAGGGGGTGGA 59.957 66.667 0.00 0.00 0.00 4.02
5084 5480 3.813724 GCTGGATGGAGGGGGTGG 61.814 72.222 0.00 0.00 0.00 4.61
5085 5481 3.813724 GGCTGGATGGAGGGGGTG 61.814 72.222 0.00 0.00 0.00 4.61
5132 5528 4.990553 GATAGGCCGGGGAAGCGC 62.991 72.222 2.18 0.00 0.00 5.92
5133 5529 4.315941 GGATAGGCCGGGGAAGCG 62.316 72.222 2.18 0.00 0.00 4.68
5134 5530 3.955044 GGGATAGGCCGGGGAAGC 61.955 72.222 2.18 0.00 37.63 3.86
5135 5531 3.249961 GGGGATAGGCCGGGGAAG 61.250 72.222 2.18 0.00 37.63 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.