Multiple sequence alignment - TraesCS2D01G386700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G386700 chr2D 100.000 3609 0 0 2714 6322 491812760 491809152 0.000000e+00 6665.0
1 TraesCS2D01G386700 chr2D 100.000 2560 0 0 1 2560 491815473 491812914 0.000000e+00 4728.0
2 TraesCS2D01G386700 chr2D 92.891 633 29 7 1 619 86524627 86525257 0.000000e+00 905.0
3 TraesCS2D01G386700 chr2D 87.000 100 13 0 5654 5753 506172209 506172110 5.180000e-21 113.0
4 TraesCS2D01G386700 chr2D 78.824 170 23 7 5654 5810 290147 290316 1.120000e-17 102.0
5 TraesCS2D01G386700 chr2A 93.615 2412 93 33 2970 5338 636924526 636922133 0.000000e+00 3544.0
6 TraesCS2D01G386700 chr2A 89.804 1785 84 34 849 2560 636926538 636924779 0.000000e+00 2198.0
7 TraesCS2D01G386700 chr2A 90.452 398 27 10 5932 6322 636911349 636910956 1.220000e-141 514.0
8 TraesCS2D01G386700 chr2A 94.792 192 10 0 616 807 636926734 636926543 3.700000e-77 300.0
9 TraesCS2D01G386700 chr2A 89.806 206 7 6 5374 5566 636922125 636921921 1.050000e-62 252.0
10 TraesCS2D01G386700 chr2A 89.441 161 12 4 2781 2937 636924683 636924524 1.390000e-46 198.0
11 TraesCS2D01G386700 chr2A 80.000 170 21 7 5654 5810 218817 218648 5.180000e-21 113.0
12 TraesCS2D01G386700 chr2B 89.846 2019 116 47 2778 4771 576095353 576093399 0.000000e+00 2510.0
13 TraesCS2D01G386700 chr2B 89.653 1759 91 37 849 2560 576097159 576095445 0.000000e+00 2156.0
14 TraesCS2D01G386700 chr2B 89.205 880 50 22 4768 5626 576093294 576092439 0.000000e+00 1057.0
15 TraesCS2D01G386700 chr2B 92.600 473 15 3 5869 6322 576092440 576091969 0.000000e+00 662.0
16 TraesCS2D01G386700 chr2B 92.308 195 6 4 615 809 576097347 576097162 1.040000e-67 268.0
17 TraesCS2D01G386700 chr2B 100.000 46 0 0 2714 2759 576095383 576095338 1.130000e-12 86.1
18 TraesCS2D01G386700 chr2B 91.935 62 4 1 5749 5810 662899946 662900006 1.130000e-12 86.1
19 TraesCS2D01G386700 chr2B 95.349 43 2 0 2287 2329 392386176 392386218 1.140000e-07 69.4
20 TraesCS2D01G386700 chr1D 93.076 621 34 3 1 619 366248138 366248751 0.000000e+00 900.0
21 TraesCS2D01G386700 chr6D 91.892 629 39 2 1 617 472503299 472502671 0.000000e+00 869.0
22 TraesCS2D01G386700 chr6D 91.153 633 42 6 1 620 75890125 75889494 0.000000e+00 846.0
23 TraesCS2D01G386700 chr6D 83.200 250 35 7 5079 5323 312819930 312819683 8.250000e-54 222.0
24 TraesCS2D01G386700 chr6D 77.059 340 57 17 4666 4996 312820247 312819920 6.510000e-40 176.0
25 TraesCS2D01G386700 chr6D 87.755 98 12 0 1256 1353 313162166 313162263 1.440000e-21 115.0
26 TraesCS2D01G386700 chr6D 96.923 65 1 1 560 624 139307632 139307695 2.410000e-19 108.0
27 TraesCS2D01G386700 chr6D 79.310 145 30 0 1209 1353 312827090 312826946 1.120000e-17 102.0
28 TraesCS2D01G386700 chr3D 91.746 630 38 6 1 619 50542025 50542651 0.000000e+00 863.0
29 TraesCS2D01G386700 chr3D 90.840 131 9 2 2287 2417 478536831 478536704 8.430000e-39 172.0
30 TraesCS2D01G386700 chr3D 89.706 68 6 1 5749 5816 210615375 210615441 1.130000e-12 86.1
31 TraesCS2D01G386700 chr7D 91.456 632 42 3 1 620 170587348 170586717 0.000000e+00 857.0
32 TraesCS2D01G386700 chr7D 85.577 104 14 1 5654 5757 15232800 15232902 2.410000e-19 108.0
33 TraesCS2D01G386700 chr7D 85.577 104 14 1 5654 5757 15236820 15236922 2.410000e-19 108.0
34 TraesCS2D01G386700 chr7D 92.188 64 4 1 5748 5811 610805336 610805274 8.730000e-14 89.8
35 TraesCS2D01G386700 chr7D 89.583 48 4 1 2283 2329 418963090 418963137 6.840000e-05 60.2
36 TraesCS2D01G386700 chrUn 92.662 586 40 3 1 583 100847906 100847321 0.000000e+00 841.0
37 TraesCS2D01G386700 chrUn 89.691 97 10 0 5655 5751 96302063 96302159 2.390000e-24 124.0
38 TraesCS2D01G386700 chr7A 90.821 621 53 4 1 617 539397130 539397750 0.000000e+00 828.0
39 TraesCS2D01G386700 chr7A 79.191 173 17 5 5655 5808 128829351 128829523 1.120000e-17 102.0
40 TraesCS2D01G386700 chr5A 90.446 628 49 10 1 619 126266578 126267203 0.000000e+00 817.0
41 TraesCS2D01G386700 chr5A 90.385 52 3 2 2283 2334 31090483 31090434 4.090000e-07 67.6
42 TraesCS2D01G386700 chr6B 82.800 250 36 7 5079 5323 513691515 513691762 3.840000e-52 217.0
43 TraesCS2D01G386700 chr6B 84.277 159 22 3 4839 4996 513691369 513691525 1.100000e-32 152.0
44 TraesCS2D01G386700 chr6B 89.474 95 10 0 1259 1353 513145805 513145711 3.100000e-23 121.0
45 TraesCS2D01G386700 chr6B 79.310 145 30 0 1209 1353 513686598 513686742 1.120000e-17 102.0
46 TraesCS2D01G386700 chr6B 78.212 179 17 9 5655 5811 288654796 288654618 1.880000e-15 95.3
47 TraesCS2D01G386700 chr6B 91.667 60 4 1 5749 5808 459599673 459599615 1.460000e-11 82.4
48 TraesCS2D01G386700 chr6A 82.869 251 34 8 5079 5323 449692844 449692597 3.840000e-52 217.0
49 TraesCS2D01G386700 chr6A 86.667 135 14 3 2283 2417 201090121 201090251 5.110000e-31 147.0
50 TraesCS2D01G386700 chr6A 80.000 150 24 5 1207 1353 450089450 450089596 8.670000e-19 106.0
51 TraesCS2D01G386700 chr6A 77.241 145 33 0 1209 1353 449698595 449698451 1.130000e-12 86.1
52 TraesCS2D01G386700 chr5B 89.320 103 11 0 5655 5757 679327789 679327891 5.140000e-26 130.0
53 TraesCS2D01G386700 chr5B 92.982 57 4 0 5752 5808 588539136 588539080 4.060000e-12 84.2
54 TraesCS2D01G386700 chr5B 100.000 28 0 0 5623 5650 679327964 679327937 1.100000e-02 52.8
55 TraesCS2D01G386700 chr4A 79.581 191 17 15 5654 5831 12207456 12207275 4.000000e-22 117.0
56 TraesCS2D01G386700 chr4A 96.970 33 0 1 5623 5655 78288567 78288598 3.000000e-03 54.7
57 TraesCS2D01G386700 chr1A 98.361 61 1 0 560 620 369574591 369574651 2.410000e-19 108.0
58 TraesCS2D01G386700 chr7B 98.333 60 1 0 560 619 1399800 1399741 8.670000e-19 106.0
59 TraesCS2D01G386700 chr5D 91.139 79 3 4 560 636 477027124 477027200 3.120000e-18 104.0
60 TraesCS2D01G386700 chr4B 96.721 61 2 0 560 620 449193576 449193516 1.120000e-17 102.0
61 TraesCS2D01G386700 chr3A 84.536 97 11 3 5655 5749 555543386 555543292 6.750000e-15 93.5
62 TraesCS2D01G386700 chr3A 96.970 33 1 0 5620 5652 277517912 277517944 8.850000e-04 56.5
63 TraesCS2D01G386700 chr3B 86.486 74 4 6 2283 2353 486620749 486620679 6.800000e-10 76.8
64 TraesCS2D01G386700 chr3B 97.222 36 1 0 2295 2330 574002436 574002471 1.900000e-05 62.1
65 TraesCS2D01G386700 chr3B 97.143 35 1 0 2295 2329 641811106 641811140 6.840000e-05 60.2
66 TraesCS2D01G386700 chr3B 96.970 33 1 0 5618 5650 13407943 13407911 8.850000e-04 56.5
67 TraesCS2D01G386700 chr4D 100.000 29 0 0 5623 5651 506872335 506872307 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G386700 chr2D 491809152 491815473 6321 True 5696.500000 6665 100.000000 1 6322 2 chr2D.!!$R2 6321
1 TraesCS2D01G386700 chr2D 86524627 86525257 630 False 905.000000 905 92.891000 1 619 1 chr2D.!!$F2 618
2 TraesCS2D01G386700 chr2A 636921921 636926734 4813 True 1298.400000 3544 91.491600 616 5566 5 chr2A.!!$R3 4950
3 TraesCS2D01G386700 chr2B 576091969 576097347 5378 True 1123.183333 2510 92.268667 615 6322 6 chr2B.!!$R1 5707
4 TraesCS2D01G386700 chr1D 366248138 366248751 613 False 900.000000 900 93.076000 1 619 1 chr1D.!!$F1 618
5 TraesCS2D01G386700 chr6D 472502671 472503299 628 True 869.000000 869 91.892000 1 617 1 chr6D.!!$R3 616
6 TraesCS2D01G386700 chr6D 75889494 75890125 631 True 846.000000 846 91.153000 1 620 1 chr6D.!!$R1 619
7 TraesCS2D01G386700 chr3D 50542025 50542651 626 False 863.000000 863 91.746000 1 619 1 chr3D.!!$F1 618
8 TraesCS2D01G386700 chr7D 170586717 170587348 631 True 857.000000 857 91.456000 1 620 1 chr7D.!!$R1 619
9 TraesCS2D01G386700 chrUn 100847321 100847906 585 True 841.000000 841 92.662000 1 583 1 chrUn.!!$R1 582
10 TraesCS2D01G386700 chr7A 539397130 539397750 620 False 828.000000 828 90.821000 1 617 1 chr7A.!!$F2 616
11 TraesCS2D01G386700 chr5A 126266578 126267203 625 False 817.000000 817 90.446000 1 619 1 chr5A.!!$F1 618

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
408 422 0.322322 TAATGTGGACTTTCGCCGGT 59.678 50.0 1.90 0.0 0.00 5.28 F
1941 2050 0.097674 CCGCGAGAAAAATGGCTCAG 59.902 55.0 8.23 0.0 0.00 3.35 F
3486 3680 1.087771 CCTATGGAACGGACGCAACC 61.088 60.0 0.00 0.0 0.00 3.77 F
4066 4269 0.099436 CAAGCGCTGCTAATTCCACC 59.901 55.0 12.58 0.0 38.25 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2070 2186 0.108585 ACCAGTGAGCGGAAATGTGT 59.891 50.0 0.00 0.0 0.00 3.72 R
3543 3737 0.726827 TCAATGCGATCTTTGGCGAC 59.273 50.0 0.00 0.0 0.00 5.19 R
4786 5111 0.036306 TCTTCTTCGCCCTTGGGTTC 59.964 55.0 7.61 0.0 0.00 3.62 R
5601 5955 0.179192 AATGTATGCAAGCACGCACG 60.179 50.0 1.79 0.0 46.56 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
408 422 0.322322 TAATGTGGACTTTCGCCGGT 59.678 50.000 1.90 0.00 0.00 5.28
640 668 2.104253 GTCCAATGCACGGGTACGG 61.104 63.158 4.22 0.00 46.48 4.02
648 676 1.315257 GCACGGGTACGGAGGAAGTA 61.315 60.000 0.00 0.00 46.48 2.24
761 789 2.490903 GCTCCATGCCCAATCATATCAC 59.509 50.000 0.00 0.00 35.15 3.06
803 831 2.109799 CCGCGGAATGAGGATGCT 59.890 61.111 24.07 0.00 40.56 3.79
809 837 1.958205 GAATGAGGATGCTCGCCCG 60.958 63.158 9.88 0.00 0.00 6.13
810 838 2.650813 GAATGAGGATGCTCGCCCGT 62.651 60.000 9.88 0.00 0.00 5.28
811 839 2.257409 AATGAGGATGCTCGCCCGTT 62.257 55.000 9.88 0.00 0.00 4.44
812 840 2.586357 GAGGATGCTCGCCCGTTC 60.586 66.667 0.00 0.00 0.00 3.95
813 841 4.514577 AGGATGCTCGCCCGTTCG 62.515 66.667 0.00 0.00 0.00 3.95
815 843 4.814294 GATGCTCGCCCGTTCGGT 62.814 66.667 10.36 0.00 0.00 4.69
816 844 4.388499 ATGCTCGCCCGTTCGGTT 62.388 61.111 10.36 0.00 0.00 4.44
819 847 4.065281 CTCGCCCGTTCGGTTCCT 62.065 66.667 10.36 0.00 0.00 3.36
820 848 3.984200 CTCGCCCGTTCGGTTCCTC 62.984 68.421 10.36 0.00 0.00 3.71
822 850 4.011517 GCCCGTTCGGTTCCTCCA 62.012 66.667 10.36 0.00 35.57 3.86
823 851 2.745037 CCCGTTCGGTTCCTCCAA 59.255 61.111 10.36 0.00 35.57 3.53
824 852 1.375523 CCCGTTCGGTTCCTCCAAG 60.376 63.158 10.36 0.00 35.57 3.61
825 853 1.375523 CCGTTCGGTTCCTCCAAGG 60.376 63.158 2.82 0.00 36.46 3.61
826 854 1.669440 CGTTCGGTTCCTCCAAGGA 59.331 57.895 0.00 0.00 44.10 3.36
836 864 4.618920 TTCCTCCAAGGAACAAGACTAC 57.381 45.455 4.30 0.00 46.88 2.73
837 865 3.583228 TCCTCCAAGGAACAAGACTACA 58.417 45.455 0.00 0.00 42.51 2.74
838 866 3.971305 TCCTCCAAGGAACAAGACTACAA 59.029 43.478 0.00 0.00 42.51 2.41
839 867 4.040461 TCCTCCAAGGAACAAGACTACAAG 59.960 45.833 0.00 0.00 42.51 3.16
840 868 4.040461 CCTCCAAGGAACAAGACTACAAGA 59.960 45.833 0.00 0.00 37.67 3.02
841 869 5.215252 TCCAAGGAACAAGACTACAAGAG 57.785 43.478 0.00 0.00 0.00 2.85
842 870 4.654262 TCCAAGGAACAAGACTACAAGAGT 59.346 41.667 0.00 0.00 42.90 3.24
843 871 5.836898 TCCAAGGAACAAGACTACAAGAGTA 59.163 40.000 0.00 0.00 39.06 2.59
844 872 6.497259 TCCAAGGAACAAGACTACAAGAGTAT 59.503 38.462 0.00 0.00 39.06 2.12
845 873 7.672660 TCCAAGGAACAAGACTACAAGAGTATA 59.327 37.037 0.00 0.00 39.06 1.47
846 874 7.760340 CCAAGGAACAAGACTACAAGAGTATAC 59.240 40.741 0.00 0.00 39.06 1.47
847 875 8.524487 CAAGGAACAAGACTACAAGAGTATACT 58.476 37.037 4.68 4.68 39.06 2.12
907 939 1.732941 TGCACTTACGGCAATGGTAG 58.267 50.000 0.00 0.00 38.54 3.18
1031 1080 1.671850 CGTCGCGATAAATGGGCCTAT 60.672 52.381 14.06 0.00 0.00 2.57
1129 1212 3.908081 GCATGGGCTCAATGGCGG 61.908 66.667 0.00 0.00 42.84 6.13
1370 1453 0.108756 GTTCTTCCCCCTTCGTCTCG 60.109 60.000 0.00 0.00 0.00 4.04
1441 1527 6.311445 GCCGTCCATATATACAATCTGAACTG 59.689 42.308 0.00 0.00 0.00 3.16
1569 1655 4.065088 TCACTATTTGGTCACTCTGCAAC 58.935 43.478 0.00 0.00 0.00 4.17
1587 1673 1.343821 CGCATACTGTTCGTTCGCC 59.656 57.895 0.00 0.00 0.00 5.54
1748 1835 3.526430 GGAACTTCCCCTTGGGTAAGTAT 59.474 47.826 15.54 7.54 44.74 2.12
1759 1853 6.768381 CCCTTGGGTAAGTATTCTCTTGATTC 59.232 42.308 0.00 0.00 31.80 2.52
1783 1877 7.874940 TCACAACCAATCTCTCATTTTAACTG 58.125 34.615 0.00 0.00 0.00 3.16
1784 1878 6.583806 CACAACCAATCTCTCATTTTAACTGC 59.416 38.462 0.00 0.00 0.00 4.40
1808 1905 8.489559 TGCAAGTAGTACGTTGTAATACTTTTG 58.510 33.333 20.70 15.07 36.55 2.44
1828 1925 3.881220 TGGCCAATTTAGCTACTGTACC 58.119 45.455 0.61 0.00 0.00 3.34
1831 1928 4.127907 GCCAATTTAGCTACTGTACCCTC 58.872 47.826 0.00 0.00 0.00 4.30
1853 1950 3.050619 TCGTTTCTCTTCTTGCGAGTTC 58.949 45.455 0.00 0.00 0.00 3.01
1890 1999 4.645588 CCTCAAGAACTAGGGTAGTACAGG 59.354 50.000 2.06 0.00 38.26 4.00
1891 2000 5.507637 CTCAAGAACTAGGGTAGTACAGGA 58.492 45.833 2.06 0.00 38.26 3.86
1892 2001 5.507637 TCAAGAACTAGGGTAGTACAGGAG 58.492 45.833 2.06 0.00 38.26 3.69
1941 2050 0.097674 CCGCGAGAAAAATGGCTCAG 59.902 55.000 8.23 0.00 0.00 3.35
1957 2066 2.745281 GCTCAGCTCCTATCGGTAGTAG 59.255 54.545 1.27 0.00 0.00 2.57
1958 2067 3.807913 GCTCAGCTCCTATCGGTAGTAGT 60.808 52.174 1.27 0.00 0.00 2.73
1992 2101 9.574516 AAGGTCCATTCCATTGAATTATACTAC 57.425 33.333 0.00 0.00 39.20 2.73
2030 2139 7.667219 AGTTTCACATTTCCACTGAGTGATATT 59.333 33.333 15.33 0.00 38.80 1.28
2054 2163 4.436584 CCTGAATTTCACATTCTCGCTCAC 60.437 45.833 0.00 0.00 0.00 3.51
2070 2186 2.490903 GCTCACGGGTCTACTGAAGTTA 59.509 50.000 0.00 0.00 0.00 2.24
2075 2191 3.830755 ACGGGTCTACTGAAGTTACACAT 59.169 43.478 0.00 0.00 0.00 3.21
2078 2194 5.347907 CGGGTCTACTGAAGTTACACATTTC 59.652 44.000 0.00 0.00 0.00 2.17
2137 2260 1.595382 CATGCGTACCAGCTAGGCC 60.595 63.158 0.00 0.00 43.14 5.19
2234 2365 1.534697 CTCTCGCCTAGGGAGTCCT 59.465 63.158 20.38 0.00 42.56 3.85
2293 2424 6.040391 TCAAAATGGGTCGATTTCTTTTCACT 59.960 34.615 0.00 0.00 0.00 3.41
2331 2467 7.796958 TGCGTATCATTTCGTTGATAGATAG 57.203 36.000 5.96 2.09 38.83 2.08
2332 2468 6.806739 TGCGTATCATTTCGTTGATAGATAGG 59.193 38.462 5.96 0.00 38.83 2.57
2333 2469 7.027760 GCGTATCATTTCGTTGATAGATAGGA 58.972 38.462 0.00 0.00 38.83 2.94
2334 2470 7.219154 GCGTATCATTTCGTTGATAGATAGGAG 59.781 40.741 0.00 0.00 38.83 3.69
2335 2471 8.451748 CGTATCATTTCGTTGATAGATAGGAGA 58.548 37.037 5.96 0.00 38.83 3.71
2336 2472 9.781834 GTATCATTTCGTTGATAGATAGGAGAG 57.218 37.037 5.96 0.00 38.83 3.20
2337 2473 7.220741 TCATTTCGTTGATAGATAGGAGAGG 57.779 40.000 0.00 0.00 0.00 3.69
2378 2514 2.182858 GAGGGGGAAGTGGGAGAGGA 62.183 65.000 0.00 0.00 0.00 3.71
2379 2515 1.690985 GGGGGAAGTGGGAGAGGAG 60.691 68.421 0.00 0.00 0.00 3.69
2380 2516 1.690985 GGGGAAGTGGGAGAGGAGG 60.691 68.421 0.00 0.00 0.00 4.30
2433 2569 3.891049 ACTCCTTACCTGAATTGCCATC 58.109 45.455 0.00 0.00 0.00 3.51
2475 2611 1.173913 AAAGCAGATTTACGGCCACC 58.826 50.000 2.24 0.00 40.39 4.61
2501 2637 1.136305 CCTTCTCAGCGGTCCGATAAA 59.864 52.381 17.49 3.20 0.00 1.40
2524 2660 4.038763 ACATCCGACGGCTGAAAGAATATA 59.961 41.667 23.67 0.00 34.07 0.86
2753 2919 6.114089 CCATGTCAACATTGATCTTCTCTCT 58.886 40.000 0.00 0.00 39.73 3.10
2754 2920 6.598457 CCATGTCAACATTGATCTTCTCTCTT 59.402 38.462 0.00 0.00 39.73 2.85
2755 2921 7.414208 CCATGTCAACATTGATCTTCTCTCTTG 60.414 40.741 0.00 0.00 39.73 3.02
2756 2922 6.528321 TGTCAACATTGATCTTCTCTCTTGT 58.472 36.000 0.00 0.00 39.73 3.16
2757 2923 6.994496 TGTCAACATTGATCTTCTCTCTTGTT 59.006 34.615 0.00 0.00 39.73 2.83
2758 2924 7.500227 TGTCAACATTGATCTTCTCTCTTGTTT 59.500 33.333 0.00 0.00 39.73 2.83
2759 2925 8.993121 GTCAACATTGATCTTCTCTCTTGTTTA 58.007 33.333 0.00 0.00 39.73 2.01
2760 2926 9.730705 TCAACATTGATCTTCTCTCTTGTTTAT 57.269 29.630 0.00 0.00 31.01 1.40
2770 2936 9.736023 TCTTCTCTCTTGTTTATTTTCTTTTGC 57.264 29.630 0.00 0.00 0.00 3.68
2771 2937 8.560576 TTCTCTCTTGTTTATTTTCTTTTGCG 57.439 30.769 0.00 0.00 0.00 4.85
2772 2938 7.138736 TCTCTCTTGTTTATTTTCTTTTGCGG 58.861 34.615 0.00 0.00 0.00 5.69
2773 2939 6.212955 TCTCTTGTTTATTTTCTTTTGCGGG 58.787 36.000 0.00 0.00 0.00 6.13
2774 2940 5.293560 TCTTGTTTATTTTCTTTTGCGGGG 58.706 37.500 0.00 0.00 0.00 5.73
2775 2941 4.674281 TGTTTATTTTCTTTTGCGGGGT 57.326 36.364 0.00 0.00 0.00 4.95
2776 2942 5.786264 TGTTTATTTTCTTTTGCGGGGTA 57.214 34.783 0.00 0.00 0.00 3.69
2777 2943 6.158023 TGTTTATTTTCTTTTGCGGGGTAA 57.842 33.333 0.00 0.00 0.00 2.85
2778 2944 6.760291 TGTTTATTTTCTTTTGCGGGGTAAT 58.240 32.000 0.00 0.00 0.00 1.89
2779 2945 6.869388 TGTTTATTTTCTTTTGCGGGGTAATC 59.131 34.615 0.00 0.00 0.00 1.75
2780 2946 6.844097 TTATTTTCTTTTGCGGGGTAATCT 57.156 33.333 0.00 0.00 0.00 2.40
2781 2947 5.738619 ATTTTCTTTTGCGGGGTAATCTT 57.261 34.783 0.00 0.00 0.00 2.40
2782 2948 4.776795 TTTCTTTTGCGGGGTAATCTTC 57.223 40.909 0.00 0.00 0.00 2.87
2783 2949 3.713826 TCTTTTGCGGGGTAATCTTCT 57.286 42.857 0.00 0.00 0.00 2.85
2784 2950 3.606687 TCTTTTGCGGGGTAATCTTCTC 58.393 45.455 0.00 0.00 0.00 2.87
2785 2951 3.263425 TCTTTTGCGGGGTAATCTTCTCT 59.737 43.478 0.00 0.00 0.00 3.10
2786 2952 2.981859 TTGCGGGGTAATCTTCTCTC 57.018 50.000 0.00 0.00 0.00 3.20
2798 2964 6.881602 GGTAATCTTCTCTCTTGTTTGATGGT 59.118 38.462 0.00 0.00 0.00 3.55
2830 2996 3.433306 TGAGGGTTCGATGGTGATTTT 57.567 42.857 0.00 0.00 0.00 1.82
2915 3085 3.498082 GCAGTTTCGCGGAAAATATTGT 58.502 40.909 0.00 0.00 33.14 2.71
2916 3086 4.654015 GCAGTTTCGCGGAAAATATTGTA 58.346 39.130 0.00 0.00 33.14 2.41
2917 3087 4.728608 GCAGTTTCGCGGAAAATATTGTAG 59.271 41.667 0.00 0.00 33.14 2.74
2918 3088 5.672819 GCAGTTTCGCGGAAAATATTGTAGT 60.673 40.000 0.00 0.00 33.14 2.73
2919 3089 6.455913 GCAGTTTCGCGGAAAATATTGTAGTA 60.456 38.462 0.00 0.00 33.14 1.82
2920 3090 7.457868 CAGTTTCGCGGAAAATATTGTAGTAA 58.542 34.615 0.00 0.00 33.14 2.24
2921 3091 7.958567 CAGTTTCGCGGAAAATATTGTAGTAAA 59.041 33.333 0.00 0.00 33.14 2.01
2922 3092 8.671028 AGTTTCGCGGAAAATATTGTAGTAAAT 58.329 29.630 0.00 0.00 33.14 1.40
2923 3093 8.940924 GTTTCGCGGAAAATATTGTAGTAAATC 58.059 33.333 0.00 0.00 33.14 2.17
2924 3094 8.428186 TTCGCGGAAAATATTGTAGTAAATCT 57.572 30.769 6.13 0.00 0.00 2.40
2925 3095 9.531942 TTCGCGGAAAATATTGTAGTAAATCTA 57.468 29.630 6.13 0.00 0.00 1.98
2946 3116 6.615088 TCTAGCGTTGTAGTACTAGTTTTGG 58.385 40.000 1.87 0.00 34.89 3.28
3015 3185 2.729882 GACATGGTAATATGTCGCCGAC 59.270 50.000 10.96 10.96 45.08 4.79
3017 3187 6.840392 GACATGGTAATATGTCGCCGACGA 62.840 50.000 13.18 3.25 45.08 4.20
3083 3259 5.743636 TGTAGTACGACAAAGGGGTTTAT 57.256 39.130 6.32 0.00 0.00 1.40
3096 3275 1.473434 GGGTTTATCTCACCAGCGAGG 60.473 57.143 0.00 0.00 45.67 4.63
3127 3306 2.125766 AACGGAGGAGGCAAAGGACC 62.126 60.000 0.00 0.00 0.00 4.46
3128 3307 2.677848 GGAGGAGGCAAAGGACCC 59.322 66.667 0.00 0.00 0.00 4.46
3283 3462 1.186917 TGGTTGAGCCATGCCCTTTG 61.187 55.000 0.00 0.00 43.61 2.77
3289 3468 1.826720 GAGCCATGCCCTTTGAATGAA 59.173 47.619 0.00 0.00 0.00 2.57
3290 3469 1.829222 AGCCATGCCCTTTGAATGAAG 59.171 47.619 0.00 0.00 0.00 3.02
3394 3583 3.895041 TGTTATCGCATGGATCTACCTCA 59.105 43.478 0.00 0.00 39.86 3.86
3420 3609 2.027688 GCGACGTACATAAGCTTGTGTC 59.972 50.000 29.19 19.53 34.29 3.67
3422 3611 1.990563 ACGTACATAAGCTTGTGTCGC 59.009 47.619 29.19 21.48 34.29 5.19
3486 3680 1.087771 CCTATGGAACGGACGCAACC 61.088 60.000 0.00 0.00 0.00 3.77
3519 3713 4.498323 GTCGTAACTTTATCCTGTAGCACG 59.502 45.833 0.00 0.00 0.00 5.34
3637 3839 2.521958 AATTCCCGGTCTCACCAGCG 62.522 60.000 0.00 0.00 38.47 5.18
3670 3872 2.590821 GGCCATCCTAGAGTTACCGTA 58.409 52.381 0.00 0.00 0.00 4.02
3672 3874 2.295629 GCCATCCTAGAGTTACCGTACC 59.704 54.545 0.00 0.00 0.00 3.34
3682 3884 2.028385 AGTTACCGTACCTGCTCAAAGG 60.028 50.000 0.00 0.00 43.57 3.11
3703 3905 2.287915 GTCGTCAATGGAAATGGATCGG 59.712 50.000 0.00 0.00 0.00 4.18
3712 3914 2.288640 GGAAATGGATCGGTAGGGTACG 60.289 54.545 0.00 0.00 0.00 3.67
3790 3993 2.018515 TCGTCAATGCATGCATGATGT 58.981 42.857 32.79 15.29 36.68 3.06
4066 4269 0.099436 CAAGCGCTGCTAATTCCACC 59.901 55.000 12.58 0.00 38.25 4.61
4068 4271 2.823829 GCGCTGCTAATTCCACCGG 61.824 63.158 0.00 0.00 0.00 5.28
4321 4524 2.567049 CTCGTCGAGGAGCGGTTT 59.433 61.111 21.00 0.00 41.33 3.27
4337 4540 2.913117 TTTGCGCCCACCCTGGTAT 61.913 57.895 4.18 0.00 35.17 2.73
4338 4541 3.636929 TTGCGCCCACCCTGGTATG 62.637 63.158 4.18 0.00 35.17 2.39
4360 4567 1.368850 GCACGCACGGTTTTGTCTC 60.369 57.895 0.00 0.00 0.00 3.36
4365 4572 2.685364 CACGGTTTTGTCTCGTGGT 58.315 52.632 7.13 0.00 46.96 4.16
4369 4576 3.989167 CACGGTTTTGTCTCGTGGTTATA 59.011 43.478 7.13 0.00 46.96 0.98
4437 4651 4.224594 TCTCTTGGCTGATGAAGATCAAGT 59.775 41.667 0.00 0.00 38.17 3.16
4627 4844 7.451255 CCCTGAACCCATCTGCATATTAATTAA 59.549 37.037 0.00 0.00 0.00 1.40
4648 4865 1.303799 TTTCCTCGTCTCCGTCCTCG 61.304 60.000 0.00 0.00 35.01 4.63
4665 4882 5.502606 GTCCTCGTCAAAGAAAAACTTCAG 58.497 41.667 0.00 0.00 37.93 3.02
4786 5111 2.172851 TTACTGCTAACCCAACACCG 57.827 50.000 0.00 0.00 0.00 4.94
4826 5157 5.824421 AGATGAATGAAAATGGTGTCTCCT 58.176 37.500 0.00 0.00 37.07 3.69
4827 5158 6.251471 AGATGAATGAAAATGGTGTCTCCTT 58.749 36.000 0.00 0.00 37.07 3.36
4828 5159 5.964958 TGAATGAAAATGGTGTCTCCTTC 57.035 39.130 0.00 0.00 37.07 3.46
4829 5160 4.766891 TGAATGAAAATGGTGTCTCCTTCC 59.233 41.667 0.00 0.00 37.07 3.46
5035 5370 3.662247 ACGAGATTTTCTTCTGACCGT 57.338 42.857 0.00 0.00 0.00 4.83
5049 5384 3.068024 TCTGACCGTTAGTACGTGGTTTT 59.932 43.478 0.00 0.00 46.20 2.43
5156 5491 0.524862 AGTACCACGGCAAGTACTCG 59.475 55.000 0.00 0.00 44.54 4.18
5334 5669 1.543208 GGAGATGAATACGGCCATGCA 60.543 52.381 2.24 0.00 0.00 3.96
5336 5671 0.593128 GATGAATACGGCCATGCACC 59.407 55.000 2.24 0.00 0.00 5.01
5337 5672 0.106769 ATGAATACGGCCATGCACCA 60.107 50.000 2.24 0.00 0.00 4.17
5338 5673 1.029408 TGAATACGGCCATGCACCAC 61.029 55.000 2.24 0.00 0.00 4.16
5339 5674 2.047151 GAATACGGCCATGCACCACG 62.047 60.000 2.24 0.00 0.00 4.94
5340 5675 2.813226 AATACGGCCATGCACCACGT 62.813 55.000 2.24 11.40 41.10 4.49
5341 5676 3.943479 TACGGCCATGCACCACGTC 62.943 63.158 2.24 0.00 38.79 4.34
5343 5678 3.127533 GGCCATGCACCACGTCTC 61.128 66.667 0.00 0.00 0.00 3.36
5344 5679 3.490759 GCCATGCACCACGTCTCG 61.491 66.667 0.00 0.00 0.00 4.04
5345 5680 2.815211 CCATGCACCACGTCTCGG 60.815 66.667 0.00 0.00 0.00 4.63
5346 5681 2.815211 CATGCACCACGTCTCGGG 60.815 66.667 0.00 0.00 0.00 5.14
5347 5682 4.760047 ATGCACCACGTCTCGGGC 62.760 66.667 0.00 0.00 0.00 6.13
5363 5698 2.746277 GCGCGACTGGATGGGTTT 60.746 61.111 12.10 0.00 0.00 3.27
5365 5700 1.375396 CGCGACTGGATGGGTTTGA 60.375 57.895 0.00 0.00 0.00 2.69
5367 5702 1.635663 GCGACTGGATGGGTTTGACG 61.636 60.000 0.00 0.00 0.00 4.35
5368 5703 0.320421 CGACTGGATGGGTTTGACGT 60.320 55.000 0.00 0.00 0.00 4.34
5370 5705 2.610976 CGACTGGATGGGTTTGACGTAA 60.611 50.000 0.00 0.00 0.00 3.18
5377 5712 5.048364 TGGATGGGTTTGACGTAAGAAATTG 60.048 40.000 0.00 0.00 43.62 2.32
5420 5762 8.729756 TGGATGAACAAGTACATGAATAAACAG 58.270 33.333 4.87 0.00 0.00 3.16
5486 5835 4.258543 GGTACTTGCTAGTGTGCCAATAA 58.741 43.478 11.27 0.00 38.53 1.40
5487 5836 4.881850 GGTACTTGCTAGTGTGCCAATAAT 59.118 41.667 11.27 0.00 38.53 1.28
5492 5841 7.056635 ACTTGCTAGTGTGCCAATAATAGAAT 58.943 34.615 0.00 0.00 31.99 2.40
5559 5910 4.699637 TGTGTATTTGTTTGAGACGTCCT 58.300 39.130 13.01 0.00 0.00 3.85
5578 5932 4.023536 GTCCTGATTGCAACTCGGTAAAAA 60.024 41.667 0.00 0.00 0.00 1.94
5590 5944 4.583073 ACTCGGTAAAAATCCAAAAGTGCT 59.417 37.500 0.00 0.00 0.00 4.40
5601 5955 6.699575 ATCCAAAAGTGCTTCACATATACC 57.300 37.500 0.00 0.00 36.74 2.73
5610 5964 0.458260 TCACATATACCGTGCGTGCT 59.542 50.000 0.00 0.00 34.27 4.40
5614 5968 0.461163 ATATACCGTGCGTGCTTGCA 60.461 50.000 0.00 0.00 43.95 4.08
5624 5978 4.466567 TGCGTGCTTGCATACATTATAC 57.533 40.909 0.00 0.00 40.62 1.47
5625 5979 4.126437 TGCGTGCTTGCATACATTATACT 58.874 39.130 0.00 0.00 40.62 2.12
5626 5980 4.211164 TGCGTGCTTGCATACATTATACTC 59.789 41.667 0.00 0.00 40.62 2.59
5627 5981 4.377431 GCGTGCTTGCATACATTATACTCC 60.377 45.833 0.00 0.00 34.15 3.85
5628 5982 4.152402 CGTGCTTGCATACATTATACTCCC 59.848 45.833 0.00 0.00 0.00 4.30
5629 5983 5.308825 GTGCTTGCATACATTATACTCCCT 58.691 41.667 0.00 0.00 0.00 4.20
5630 5984 5.409826 GTGCTTGCATACATTATACTCCCTC 59.590 44.000 0.00 0.00 0.00 4.30
5631 5985 4.938226 GCTTGCATACATTATACTCCCTCC 59.062 45.833 0.00 0.00 0.00 4.30
5632 5986 5.280215 GCTTGCATACATTATACTCCCTCCT 60.280 44.000 0.00 0.00 0.00 3.69
5633 5987 6.745474 GCTTGCATACATTATACTCCCTCCTT 60.745 42.308 0.00 0.00 0.00 3.36
5634 5988 6.763715 TGCATACATTATACTCCCTCCTTT 57.236 37.500 0.00 0.00 0.00 3.11
5635 5989 6.769512 TGCATACATTATACTCCCTCCTTTC 58.230 40.000 0.00 0.00 0.00 2.62
5636 5990 6.174049 GCATACATTATACTCCCTCCTTTCC 58.826 44.000 0.00 0.00 0.00 3.13
5637 5991 6.239887 GCATACATTATACTCCCTCCTTTCCA 60.240 42.308 0.00 0.00 0.00 3.53
5638 5992 7.691791 GCATACATTATACTCCCTCCTTTCCAA 60.692 40.741 0.00 0.00 0.00 3.53
5639 5993 6.652205 ACATTATACTCCCTCCTTTCCAAA 57.348 37.500 0.00 0.00 0.00 3.28
5640 5994 7.039722 ACATTATACTCCCTCCTTTCCAAAA 57.960 36.000 0.00 0.00 0.00 2.44
5641 5995 7.652554 ACATTATACTCCCTCCTTTCCAAAAT 58.347 34.615 0.00 0.00 0.00 1.82
5642 5996 8.787818 ACATTATACTCCCTCCTTTCCAAAATA 58.212 33.333 0.00 0.00 0.00 1.40
5643 5997 9.813826 CATTATACTCCCTCCTTTCCAAAATAT 57.186 33.333 0.00 0.00 0.00 1.28
5647 6001 6.673583 ACTCCCTCCTTTCCAAAATATAAGG 58.326 40.000 0.00 0.00 38.78 2.69
5648 6002 5.454966 TCCCTCCTTTCCAAAATATAAGGC 58.545 41.667 0.00 0.00 37.62 4.35
5649 6003 4.278419 CCCTCCTTTCCAAAATATAAGGCG 59.722 45.833 0.00 0.00 37.62 5.52
5650 6004 4.887655 CCTCCTTTCCAAAATATAAGGCGT 59.112 41.667 0.00 0.00 37.62 5.68
5651 6005 5.008712 CCTCCTTTCCAAAATATAAGGCGTC 59.991 44.000 0.00 0.00 37.62 5.19
5652 6006 4.573201 TCCTTTCCAAAATATAAGGCGTCG 59.427 41.667 0.00 0.00 37.62 5.12
5653 6007 4.261031 CCTTTCCAAAATATAAGGCGTCGG 60.261 45.833 0.00 0.00 31.59 4.79
5654 6008 3.547054 TCCAAAATATAAGGCGTCGGT 57.453 42.857 0.00 0.00 0.00 4.69
5655 6009 4.669206 TCCAAAATATAAGGCGTCGGTA 57.331 40.909 0.00 0.00 0.00 4.02
5656 6010 5.217978 TCCAAAATATAAGGCGTCGGTAT 57.782 39.130 0.00 0.00 0.00 2.73
5657 6011 4.992319 TCCAAAATATAAGGCGTCGGTATG 59.008 41.667 0.00 0.00 0.00 2.39
5658 6012 4.753107 CCAAAATATAAGGCGTCGGTATGT 59.247 41.667 0.00 0.00 0.00 2.29
5659 6013 5.107220 CCAAAATATAAGGCGTCGGTATGTC 60.107 44.000 0.00 0.00 0.00 3.06
5660 6014 5.464030 AAATATAAGGCGTCGGTATGTCT 57.536 39.130 0.00 0.00 0.00 3.41
5661 6015 6.579666 AAATATAAGGCGTCGGTATGTCTA 57.420 37.500 0.00 0.00 0.00 2.59
5662 6016 6.770746 AATATAAGGCGTCGGTATGTCTAT 57.229 37.500 0.00 0.00 0.00 1.98
5663 6017 7.870509 AATATAAGGCGTCGGTATGTCTATA 57.129 36.000 0.00 0.00 0.00 1.31
5664 6018 7.870509 ATATAAGGCGTCGGTATGTCTATAA 57.129 36.000 0.00 0.00 0.00 0.98
5665 6019 4.924305 AAGGCGTCGGTATGTCTATAAA 57.076 40.909 0.00 0.00 0.00 1.40
5666 6020 4.924305 AGGCGTCGGTATGTCTATAAAA 57.076 40.909 0.00 0.00 0.00 1.52
5667 6021 5.464030 AGGCGTCGGTATGTCTATAAAAT 57.536 39.130 0.00 0.00 0.00 1.82
5668 6022 5.850614 AGGCGTCGGTATGTCTATAAAATT 58.149 37.500 0.00 0.00 0.00 1.82
5669 6023 6.985117 AGGCGTCGGTATGTCTATAAAATTA 58.015 36.000 0.00 0.00 0.00 1.40
5670 6024 7.436118 AGGCGTCGGTATGTCTATAAAATTAA 58.564 34.615 0.00 0.00 0.00 1.40
5671 6025 8.092687 AGGCGTCGGTATGTCTATAAAATTAAT 58.907 33.333 0.00 0.00 0.00 1.40
5672 6026 9.357652 GGCGTCGGTATGTCTATAAAATTAATA 57.642 33.333 0.00 0.00 0.00 0.98
5722 6076 6.266203 TGCAAAACAAATACAACAATGTCG 57.734 33.333 0.00 0.00 41.05 4.35
5723 6077 5.807520 TGCAAAACAAATACAACAATGTCGT 59.192 32.000 0.00 0.00 41.05 4.34
5724 6078 6.972901 TGCAAAACAAATACAACAATGTCGTA 59.027 30.769 0.00 0.00 41.05 3.43
5725 6079 7.649705 TGCAAAACAAATACAACAATGTCGTAT 59.350 29.630 0.00 0.00 41.05 3.06
5726 6080 9.119329 GCAAAACAAATACAACAATGTCGTATA 57.881 29.630 0.00 0.00 41.05 1.47
5754 6108 7.919690 CATGTTTAATCCATGTACTTCGATGT 58.080 34.615 9.12 9.12 35.94 3.06
5755 6109 9.040939 CATGTTTAATCCATGTACTTCGATGTA 57.959 33.333 7.05 7.05 35.94 2.29
5756 6110 9.778741 ATGTTTAATCCATGTACTTCGATGTAT 57.221 29.630 13.59 0.00 0.00 2.29
5757 6111 9.256477 TGTTTAATCCATGTACTTCGATGTATC 57.744 33.333 13.59 8.62 0.00 2.24
5758 6112 9.256477 GTTTAATCCATGTACTTCGATGTATCA 57.744 33.333 13.59 12.99 0.00 2.15
5759 6113 9.825109 TTTAATCCATGTACTTCGATGTATCAA 57.175 29.630 13.59 4.65 0.00 2.57
5760 6114 9.825109 TTAATCCATGTACTTCGATGTATCAAA 57.175 29.630 13.59 2.53 0.00 2.69
5761 6115 7.953158 ATCCATGTACTTCGATGTATCAAAG 57.047 36.000 13.59 10.20 0.00 2.77
5762 6116 7.107639 TCCATGTACTTCGATGTATCAAAGA 57.892 36.000 13.59 10.99 0.00 2.52
5763 6117 6.978659 TCCATGTACTTCGATGTATCAAAGAC 59.021 38.462 13.59 3.42 0.00 3.01
5764 6118 6.980978 CCATGTACTTCGATGTATCAAAGACT 59.019 38.462 13.59 0.00 0.00 3.24
5765 6119 7.043125 CCATGTACTTCGATGTATCAAAGACTG 60.043 40.741 13.59 8.55 0.00 3.51
5766 6120 6.920817 TGTACTTCGATGTATCAAAGACTGT 58.079 36.000 13.59 0.00 0.00 3.55
5767 6121 6.806739 TGTACTTCGATGTATCAAAGACTGTG 59.193 38.462 13.59 0.00 0.00 3.66
5768 6122 4.627467 ACTTCGATGTATCAAAGACTGTGC 59.373 41.667 1.47 0.00 0.00 4.57
5769 6123 4.186856 TCGATGTATCAAAGACTGTGCA 57.813 40.909 0.00 0.00 0.00 4.57
5770 6124 3.926527 TCGATGTATCAAAGACTGTGCAC 59.073 43.478 10.75 10.75 0.00 4.57
5771 6125 3.679502 CGATGTATCAAAGACTGTGCACA 59.320 43.478 20.37 20.37 0.00 4.57
5782 6136 0.110509 CTGTGCACAGTCAATCACGC 60.111 55.000 34.04 0.00 39.09 5.34
5783 6137 1.207593 GTGCACAGTCAATCACGCC 59.792 57.895 13.17 0.00 0.00 5.68
5784 6138 1.071299 TGCACAGTCAATCACGCCT 59.929 52.632 0.00 0.00 0.00 5.52
5785 6139 0.534877 TGCACAGTCAATCACGCCTT 60.535 50.000 0.00 0.00 0.00 4.35
5786 6140 1.270571 TGCACAGTCAATCACGCCTTA 60.271 47.619 0.00 0.00 0.00 2.69
5787 6141 2.009774 GCACAGTCAATCACGCCTTAT 58.990 47.619 0.00 0.00 0.00 1.73
5788 6142 3.194861 GCACAGTCAATCACGCCTTATA 58.805 45.455 0.00 0.00 0.00 0.98
5789 6143 3.809832 GCACAGTCAATCACGCCTTATAT 59.190 43.478 0.00 0.00 0.00 0.86
5790 6144 4.273480 GCACAGTCAATCACGCCTTATATT 59.727 41.667 0.00 0.00 0.00 1.28
5791 6145 5.220854 GCACAGTCAATCACGCCTTATATTT 60.221 40.000 0.00 0.00 0.00 1.40
5792 6146 6.677920 GCACAGTCAATCACGCCTTATATTTT 60.678 38.462 0.00 0.00 0.00 1.82
5793 6147 6.688385 CACAGTCAATCACGCCTTATATTTTG 59.312 38.462 0.00 0.00 0.00 2.44
5794 6148 6.183360 ACAGTCAATCACGCCTTATATTTTGG 60.183 38.462 0.00 0.00 0.00 3.28
5795 6149 5.299279 AGTCAATCACGCCTTATATTTTGGG 59.701 40.000 0.00 0.00 0.00 4.12
5796 6150 5.298276 GTCAATCACGCCTTATATTTTGGGA 59.702 40.000 0.00 0.00 0.00 4.37
5797 6151 5.888724 TCAATCACGCCTTATATTTTGGGAA 59.111 36.000 0.00 0.00 0.00 3.97
5798 6152 6.039270 TCAATCACGCCTTATATTTTGGGAAG 59.961 38.462 0.00 0.00 0.00 3.46
5799 6153 4.204012 TCACGCCTTATATTTTGGGAAGG 58.796 43.478 0.00 0.00 41.26 3.46
5800 6154 4.080243 TCACGCCTTATATTTTGGGAAGGA 60.080 41.667 3.71 0.00 40.88 3.36
5801 6155 4.275936 CACGCCTTATATTTTGGGAAGGAG 59.724 45.833 3.71 2.94 40.88 3.69
5802 6156 3.821033 CGCCTTATATTTTGGGAAGGAGG 59.179 47.826 3.71 0.00 40.88 4.30
5803 6157 4.152647 GCCTTATATTTTGGGAAGGAGGG 58.847 47.826 3.71 0.00 40.88 4.30
5804 6158 4.141018 GCCTTATATTTTGGGAAGGAGGGA 60.141 45.833 3.71 0.00 40.88 4.20
5805 6159 5.635120 CCTTATATTTTGGGAAGGAGGGAG 58.365 45.833 0.00 0.00 40.88 4.30
5806 6160 5.134509 CCTTATATTTTGGGAAGGAGGGAGT 59.865 44.000 0.00 0.00 40.88 3.85
5807 6161 6.331837 CCTTATATTTTGGGAAGGAGGGAGTA 59.668 42.308 0.00 0.00 40.88 2.59
5808 6162 7.018650 CCTTATATTTTGGGAAGGAGGGAGTAT 59.981 40.741 0.00 0.00 40.88 2.12
5809 6163 6.865651 ATATTTTGGGAAGGAGGGAGTATT 57.134 37.500 0.00 0.00 0.00 1.89
5810 6164 7.964730 ATATTTTGGGAAGGAGGGAGTATTA 57.035 36.000 0.00 0.00 0.00 0.98
5811 6165 5.446260 TTTTGGGAAGGAGGGAGTATTAC 57.554 43.478 0.00 0.00 0.00 1.89
5812 6166 3.056201 TGGGAAGGAGGGAGTATTACC 57.944 52.381 0.00 0.00 0.00 2.85
5813 6167 2.595380 TGGGAAGGAGGGAGTATTACCT 59.405 50.000 0.00 0.00 40.54 3.08
5814 6168 3.801317 TGGGAAGGAGGGAGTATTACCTA 59.199 47.826 0.00 0.00 37.18 3.08
5815 6169 4.235873 TGGGAAGGAGGGAGTATTACCTAA 59.764 45.833 0.00 0.00 37.18 2.69
5816 6170 5.222086 GGGAAGGAGGGAGTATTACCTAAA 58.778 45.833 0.00 0.00 37.18 1.85
5817 6171 5.071519 GGGAAGGAGGGAGTATTACCTAAAC 59.928 48.000 0.00 0.00 37.18 2.01
5818 6172 5.664457 GGAAGGAGGGAGTATTACCTAAACA 59.336 44.000 0.00 0.00 37.18 2.83
5819 6173 6.407865 GGAAGGAGGGAGTATTACCTAAACAC 60.408 46.154 0.00 0.00 37.18 3.32
5820 6174 5.596763 AGGAGGGAGTATTACCTAAACACA 58.403 41.667 0.00 0.00 37.18 3.72
5821 6175 6.027482 AGGAGGGAGTATTACCTAAACACAA 58.973 40.000 0.00 0.00 37.18 3.33
5822 6176 6.502863 AGGAGGGAGTATTACCTAAACACAAA 59.497 38.462 0.00 0.00 37.18 2.83
5823 6177 7.017850 AGGAGGGAGTATTACCTAAACACAAAA 59.982 37.037 0.00 0.00 37.18 2.44
5824 6178 7.832685 GGAGGGAGTATTACCTAAACACAAAAT 59.167 37.037 0.00 0.00 37.18 1.82
5825 6179 9.239551 GAGGGAGTATTACCTAAACACAAAATT 57.760 33.333 0.00 0.00 37.18 1.82
5826 6180 9.596308 AGGGAGTATTACCTAAACACAAAATTT 57.404 29.630 0.00 0.00 34.71 1.82
5854 6208 9.774742 GTTAAACATATACTTCTTGCTTTCTGG 57.225 33.333 0.00 0.00 0.00 3.86
5855 6209 9.515226 TTAAACATATACTTCTTGCTTTCTGGT 57.485 29.630 0.00 0.00 0.00 4.00
5856 6210 8.409358 AAACATATACTTCTTGCTTTCTGGTT 57.591 30.769 0.00 0.00 0.00 3.67
5857 6211 7.617041 ACATATACTTCTTGCTTTCTGGTTC 57.383 36.000 0.00 0.00 0.00 3.62
5858 6212 7.168219 ACATATACTTCTTGCTTTCTGGTTCA 58.832 34.615 0.00 0.00 0.00 3.18
5859 6213 7.335422 ACATATACTTCTTGCTTTCTGGTTCAG 59.665 37.037 0.00 0.00 0.00 3.02
5860 6214 2.620585 ACTTCTTGCTTTCTGGTTCAGC 59.379 45.455 0.00 0.00 0.00 4.26
5861 6215 2.645838 TCTTGCTTTCTGGTTCAGCT 57.354 45.000 0.00 0.00 34.42 4.24
5862 6216 2.936202 TCTTGCTTTCTGGTTCAGCTT 58.064 42.857 0.00 0.00 34.42 3.74
5863 6217 3.290710 TCTTGCTTTCTGGTTCAGCTTT 58.709 40.909 0.00 0.00 34.42 3.51
5864 6218 3.067180 TCTTGCTTTCTGGTTCAGCTTTG 59.933 43.478 0.00 0.00 34.42 2.77
5865 6219 2.653726 TGCTTTCTGGTTCAGCTTTGA 58.346 42.857 0.00 0.00 34.42 2.69
5866 6220 3.023119 TGCTTTCTGGTTCAGCTTTGAA 58.977 40.909 0.00 0.00 34.42 2.69
5867 6221 3.067180 TGCTTTCTGGTTCAGCTTTGAAG 59.933 43.478 0.00 0.00 34.42 3.02
5887 6241 6.631016 TGAAGCTATGAAACAGAATACGTCT 58.369 36.000 0.00 0.00 36.88 4.18
5937 6291 5.725822 TGGAATTTTTCATGAATTAGGCCCT 59.274 36.000 9.40 0.00 0.00 5.19
5938 6292 6.051074 GGAATTTTTCATGAATTAGGCCCTG 58.949 40.000 9.40 0.00 0.00 4.45
5984 6339 1.061857 CGCGCACTGCATATAACAACA 59.938 47.619 8.75 0.00 46.97 3.33
6082 6455 6.262944 AGTCTGCTTGTTTGTTGATGATACAA 59.737 34.615 0.00 0.00 33.92 2.41
6195 6568 0.677288 TGTACAACACTACAGCGGCT 59.323 50.000 0.00 0.00 0.00 5.52
6197 6570 1.459592 GTACAACACTACAGCGGCTTG 59.540 52.381 0.00 0.00 0.00 4.01
6217 6590 1.620323 GAAGCCTCCCTGCATTTTGTT 59.380 47.619 0.00 0.00 0.00 2.83
6235 6608 2.762887 TGTTTCAGGAATGTTTGCCACA 59.237 40.909 0.00 0.00 40.71 4.17
6236 6609 3.181477 TGTTTCAGGAATGTTTGCCACAG 60.181 43.478 0.00 0.00 39.40 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
188 191 2.756283 CCTCCTCTTCGGCCTCGT 60.756 66.667 0.00 0.00 37.69 4.18
329 333 2.439701 CCCTAGGCGTCCTCGTCA 60.440 66.667 2.05 0.00 44.74 4.35
351 361 6.892310 AAAACACTAAAAACTAGACGACGT 57.108 33.333 0.00 0.00 0.00 4.34
388 402 1.065709 ACCGGCGAAAGTCCACATTAT 60.066 47.619 9.30 0.00 0.00 1.28
408 422 0.035820 ATAAAAGCCGGCCACGAAGA 60.036 50.000 26.15 2.11 44.60 2.87
494 511 2.357034 CAACACTGGTCCGACCCG 60.357 66.667 15.24 11.21 37.50 5.28
531 548 3.649986 AAACGTCTGGCGCTGTGC 61.650 61.111 7.64 4.24 46.11 4.57
761 789 0.040514 TGCTTCGTTGGTTGAATGCG 60.041 50.000 0.00 0.00 0.00 4.73
803 831 4.060038 GAGGAACCGAACGGGCGA 62.060 66.667 17.44 0.00 40.62 5.54
816 844 3.583228 TGTAGTCTTGTTCCTTGGAGGA 58.417 45.455 0.00 0.00 44.10 3.71
817 845 4.040461 TCTTGTAGTCTTGTTCCTTGGAGG 59.960 45.833 0.00 0.00 36.46 4.30
818 846 5.215252 TCTTGTAGTCTTGTTCCTTGGAG 57.785 43.478 0.00 0.00 0.00 3.86
819 847 4.654262 ACTCTTGTAGTCTTGTTCCTTGGA 59.346 41.667 0.00 0.00 30.33 3.53
820 848 4.962155 ACTCTTGTAGTCTTGTTCCTTGG 58.038 43.478 0.00 0.00 30.33 3.61
821 849 8.524487 AGTATACTCTTGTAGTCTTGTTCCTTG 58.476 37.037 0.00 0.00 39.80 3.61
822 850 8.653036 AGTATACTCTTGTAGTCTTGTTCCTT 57.347 34.615 0.00 0.00 39.80 3.36
823 851 7.889073 TGAGTATACTCTTGTAGTCTTGTTCCT 59.111 37.037 28.53 0.00 43.25 3.36
824 852 8.053026 TGAGTATACTCTTGTAGTCTTGTTCC 57.947 38.462 28.53 2.50 43.25 3.62
825 853 9.562583 CTTGAGTATACTCTTGTAGTCTTGTTC 57.437 37.037 28.53 3.09 43.25 3.18
826 854 8.524487 CCTTGAGTATACTCTTGTAGTCTTGTT 58.476 37.037 28.53 0.00 43.25 2.83
827 855 7.889073 TCCTTGAGTATACTCTTGTAGTCTTGT 59.111 37.037 28.53 0.00 43.25 3.16
828 856 8.282455 TCCTTGAGTATACTCTTGTAGTCTTG 57.718 38.462 28.53 11.16 43.25 3.02
829 857 8.741841 GTTCCTTGAGTATACTCTTGTAGTCTT 58.258 37.037 28.53 0.00 43.25 3.01
830 858 7.889073 TGTTCCTTGAGTATACTCTTGTAGTCT 59.111 37.037 28.53 0.00 43.25 3.24
831 859 8.053026 TGTTCCTTGAGTATACTCTTGTAGTC 57.947 38.462 28.53 15.84 43.25 2.59
832 860 8.418597 TTGTTCCTTGAGTATACTCTTGTAGT 57.581 34.615 28.53 0.00 43.25 2.73
833 861 9.307121 CATTGTTCCTTGAGTATACTCTTGTAG 57.693 37.037 28.53 19.90 43.25 2.74
834 862 7.764443 GCATTGTTCCTTGAGTATACTCTTGTA 59.236 37.037 28.53 10.03 43.25 2.41
835 863 6.595716 GCATTGTTCCTTGAGTATACTCTTGT 59.404 38.462 28.53 0.00 43.25 3.16
836 864 6.037610 GGCATTGTTCCTTGAGTATACTCTTG 59.962 42.308 28.53 20.92 43.25 3.02
837 865 6.116126 GGCATTGTTCCTTGAGTATACTCTT 58.884 40.000 28.53 0.00 43.25 2.85
838 866 5.675538 GGCATTGTTCCTTGAGTATACTCT 58.324 41.667 28.53 7.00 43.25 3.24
839 867 4.508124 CGGCATTGTTCCTTGAGTATACTC 59.492 45.833 23.53 23.53 43.15 2.59
840 868 4.442706 CGGCATTGTTCCTTGAGTATACT 58.557 43.478 4.68 4.68 0.00 2.12
841 869 3.560068 CCGGCATTGTTCCTTGAGTATAC 59.440 47.826 0.00 0.00 0.00 1.47
842 870 3.804036 CCGGCATTGTTCCTTGAGTATA 58.196 45.455 0.00 0.00 0.00 1.47
843 871 2.643551 CCGGCATTGTTCCTTGAGTAT 58.356 47.619 0.00 0.00 0.00 2.12
844 872 1.948611 GCCGGCATTGTTCCTTGAGTA 60.949 52.381 24.80 0.00 0.00 2.59
845 873 1.244019 GCCGGCATTGTTCCTTGAGT 61.244 55.000 24.80 0.00 0.00 3.41
846 874 1.508088 GCCGGCATTGTTCCTTGAG 59.492 57.895 24.80 0.00 0.00 3.02
847 875 1.976474 GGCCGGCATTGTTCCTTGA 60.976 57.895 30.85 0.00 0.00 3.02
907 939 0.804989 CAGCTCGGGTTTGATTGGTC 59.195 55.000 0.00 0.00 0.00 4.02
1008 1055 1.068417 CCCATTTATCGCGACGGGA 59.932 57.895 12.93 17.41 35.57 5.14
1009 1056 2.604174 GCCCATTTATCGCGACGGG 61.604 63.158 12.93 17.40 36.71 5.28
1045 1094 2.103771 ACTGTGAGTGTGAGCAAGTGAT 59.896 45.455 0.00 0.00 0.00 3.06
1129 1212 2.107953 GATCTCCTCCACGCTGGC 59.892 66.667 0.00 0.00 37.47 4.85
1137 1220 4.593864 GCCGCACCGATCTCCTCC 62.594 72.222 0.00 0.00 0.00 4.30
1370 1453 2.161486 GCGACGGTGCAGATGAGAC 61.161 63.158 0.00 0.00 34.15 3.36
1411 1497 1.278238 GTATATATGGACGGCTGCGC 58.722 55.000 0.00 0.00 0.00 6.09
1441 1527 2.506957 CCCCCAAAACCACCAGCAC 61.507 63.158 0.00 0.00 0.00 4.40
1569 1655 1.076533 AGGCGAACGAACAGTATGCG 61.077 55.000 0.00 0.00 42.53 4.73
1587 1673 1.789078 AAAAGCAGCTGGTGTGCGAG 61.789 55.000 20.97 0.00 46.06 5.03
1748 1835 6.537355 AGAGATTGGTTGTGAATCAAGAGAA 58.463 36.000 0.00 0.00 36.66 2.87
1759 1853 6.583806 GCAGTTAAAATGAGAGATTGGTTGTG 59.416 38.462 0.00 0.00 0.00 3.33
1783 1877 7.953710 CCAAAAGTATTACAACGTACTACTTGC 59.046 37.037 14.10 0.00 33.98 4.01
1784 1878 7.953710 GCCAAAAGTATTACAACGTACTACTTG 59.046 37.037 14.10 6.88 33.98 3.16
1790 1887 5.610235 TGGCCAAAAGTATTACAACGTAC 57.390 39.130 0.61 0.00 0.00 3.67
1791 1888 6.821031 ATTGGCCAAAAGTATTACAACGTA 57.179 33.333 24.71 0.00 0.00 3.57
1792 1889 5.715434 ATTGGCCAAAAGTATTACAACGT 57.285 34.783 24.71 0.00 0.00 3.99
1793 1890 7.201401 GCTAAATTGGCCAAAAGTATTACAACG 60.201 37.037 24.71 6.61 0.00 4.10
1795 1892 7.902087 AGCTAAATTGGCCAAAAGTATTACAA 58.098 30.769 24.71 0.00 0.00 2.41
1796 1893 7.475137 AGCTAAATTGGCCAAAAGTATTACA 57.525 32.000 24.71 2.81 0.00 2.41
1797 1894 8.683615 AGTAGCTAAATTGGCCAAAAGTATTAC 58.316 33.333 24.71 19.35 0.00 1.89
1798 1895 8.682710 CAGTAGCTAAATTGGCCAAAAGTATTA 58.317 33.333 24.71 14.78 0.00 0.98
1799 1896 7.178451 ACAGTAGCTAAATTGGCCAAAAGTATT 59.822 33.333 24.71 9.06 0.00 1.89
1800 1897 6.663523 ACAGTAGCTAAATTGGCCAAAAGTAT 59.336 34.615 24.71 14.49 0.00 2.12
1808 1905 3.118000 AGGGTACAGTAGCTAAATTGGCC 60.118 47.826 9.62 0.00 0.00 5.36
1828 1925 1.989165 CGCAAGAAGAGAAACGAGAGG 59.011 52.381 0.00 0.00 43.02 3.69
1853 1950 4.873746 TCTTGAGGATTAATCGGGCTAG 57.126 45.455 9.32 7.42 0.00 3.42
1890 1999 2.351544 GGGAAGTCACTGTGTCGTACTC 60.352 54.545 7.79 0.41 0.00 2.59
1891 2000 1.612463 GGGAAGTCACTGTGTCGTACT 59.388 52.381 7.79 0.79 0.00 2.73
1892 2001 1.338973 TGGGAAGTCACTGTGTCGTAC 59.661 52.381 7.79 1.08 0.00 3.67
1967 2076 8.949421 AGTAGTATAATTCAATGGAATGGACCT 58.051 33.333 0.00 0.00 42.87 3.85
1992 2101 9.653287 TGGAAATGTGAAACTCAGTAATACTAG 57.347 33.333 0.00 0.00 38.04 2.57
2005 2114 5.695851 ATCACTCAGTGGAAATGTGAAAC 57.304 39.130 4.57 0.00 40.37 2.78
2030 2139 3.935203 GAGCGAGAATGTGAAATTCAGGA 59.065 43.478 0.00 0.00 0.00 3.86
2046 2155 1.025113 TCAGTAGACCCGTGAGCGAG 61.025 60.000 0.00 0.00 41.33 5.03
2047 2156 0.607217 TTCAGTAGACCCGTGAGCGA 60.607 55.000 0.00 0.00 41.33 4.93
2054 2163 3.928727 TGTGTAACTTCAGTAGACCCG 57.071 47.619 0.00 0.00 38.04 5.28
2070 2186 0.108585 ACCAGTGAGCGGAAATGTGT 59.891 50.000 0.00 0.00 0.00 3.72
2075 2191 1.070786 GTGGACCAGTGAGCGGAAA 59.929 57.895 0.00 0.00 0.00 3.13
2078 2194 0.320374 TTAAGTGGACCAGTGAGCGG 59.680 55.000 1.54 0.00 0.00 5.52
2137 2260 5.929697 ATTCATGCACGTATAGTTCCATG 57.070 39.130 0.00 0.00 0.00 3.66
2320 2451 6.775629 ACTCTTGTCCTCTCCTATCTATCAAC 59.224 42.308 0.00 0.00 0.00 3.18
2331 2467 6.969993 ATCTATGTTACTCTTGTCCTCTCC 57.030 41.667 0.00 0.00 0.00 3.71
2332 2468 9.344772 TCTTATCTATGTTACTCTTGTCCTCTC 57.655 37.037 0.00 0.00 0.00 3.20
2333 2469 9.349713 CTCTTATCTATGTTACTCTTGTCCTCT 57.650 37.037 0.00 0.00 0.00 3.69
2334 2470 9.344772 TCTCTTATCTATGTTACTCTTGTCCTC 57.655 37.037 0.00 0.00 0.00 3.71
2335 2471 9.349713 CTCTCTTATCTATGTTACTCTTGTCCT 57.650 37.037 0.00 0.00 0.00 3.85
2336 2472 8.573035 CCTCTCTTATCTATGTTACTCTTGTCC 58.427 40.741 0.00 0.00 0.00 4.02
2337 2473 8.573035 CCCTCTCTTATCTATGTTACTCTTGTC 58.427 40.741 0.00 0.00 0.00 3.18
2378 2514 4.826274 AGTGTATGCTGTGTTGTATCCT 57.174 40.909 0.00 0.00 0.00 3.24
2379 2515 4.437390 GCAAGTGTATGCTGTGTTGTATCC 60.437 45.833 0.00 0.00 43.06 2.59
2380 2516 4.437390 GGCAAGTGTATGCTGTGTTGTATC 60.437 45.833 0.00 0.00 45.68 2.24
2475 2611 1.294659 GACCGCTGAGAAGGCAAGTG 61.295 60.000 0.00 0.00 0.00 3.16
2501 2637 0.320374 TTCTTTCAGCCGTCGGATGT 59.680 50.000 27.41 2.26 40.37 3.06
2753 2919 5.024785 ACCCCGCAAAAGAAAATAAACAA 57.975 34.783 0.00 0.00 0.00 2.83
2754 2920 4.674281 ACCCCGCAAAAGAAAATAAACA 57.326 36.364 0.00 0.00 0.00 2.83
2755 2921 7.094631 AGATTACCCCGCAAAAGAAAATAAAC 58.905 34.615 0.00 0.00 0.00 2.01
2756 2922 7.234661 AGATTACCCCGCAAAAGAAAATAAA 57.765 32.000 0.00 0.00 0.00 1.40
2757 2923 6.844097 AGATTACCCCGCAAAAGAAAATAA 57.156 33.333 0.00 0.00 0.00 1.40
2758 2924 6.661805 AGAAGATTACCCCGCAAAAGAAAATA 59.338 34.615 0.00 0.00 0.00 1.40
2759 2925 5.480422 AGAAGATTACCCCGCAAAAGAAAAT 59.520 36.000 0.00 0.00 0.00 1.82
2760 2926 4.830600 AGAAGATTACCCCGCAAAAGAAAA 59.169 37.500 0.00 0.00 0.00 2.29
2761 2927 4.403734 AGAAGATTACCCCGCAAAAGAAA 58.596 39.130 0.00 0.00 0.00 2.52
2762 2928 4.007659 GAGAAGATTACCCCGCAAAAGAA 58.992 43.478 0.00 0.00 0.00 2.52
2763 2929 3.263425 AGAGAAGATTACCCCGCAAAAGA 59.737 43.478 0.00 0.00 0.00 2.52
2764 2930 3.610911 AGAGAAGATTACCCCGCAAAAG 58.389 45.455 0.00 0.00 0.00 2.27
2765 2931 3.263425 AGAGAGAAGATTACCCCGCAAAA 59.737 43.478 0.00 0.00 0.00 2.44
2766 2932 2.838202 AGAGAGAAGATTACCCCGCAAA 59.162 45.455 0.00 0.00 0.00 3.68
2767 2933 2.467880 AGAGAGAAGATTACCCCGCAA 58.532 47.619 0.00 0.00 0.00 4.85
2768 2934 2.160721 AGAGAGAAGATTACCCCGCA 57.839 50.000 0.00 0.00 0.00 5.69
2769 2935 2.168728 ACAAGAGAGAAGATTACCCCGC 59.831 50.000 0.00 0.00 0.00 6.13
2770 2936 4.473477 AACAAGAGAGAAGATTACCCCG 57.527 45.455 0.00 0.00 0.00 5.73
2771 2937 5.805728 TCAAACAAGAGAGAAGATTACCCC 58.194 41.667 0.00 0.00 0.00 4.95
2772 2938 6.317391 CCATCAAACAAGAGAGAAGATTACCC 59.683 42.308 0.00 0.00 0.00 3.69
2773 2939 6.881602 ACCATCAAACAAGAGAGAAGATTACC 59.118 38.462 0.00 0.00 0.00 2.85
2774 2940 7.604164 TCACCATCAAACAAGAGAGAAGATTAC 59.396 37.037 0.00 0.00 0.00 1.89
2775 2941 7.604164 GTCACCATCAAACAAGAGAGAAGATTA 59.396 37.037 0.00 0.00 0.00 1.75
2776 2942 6.429385 GTCACCATCAAACAAGAGAGAAGATT 59.571 38.462 0.00 0.00 0.00 2.40
2777 2943 5.936956 GTCACCATCAAACAAGAGAGAAGAT 59.063 40.000 0.00 0.00 0.00 2.40
2778 2944 5.070981 AGTCACCATCAAACAAGAGAGAAGA 59.929 40.000 0.00 0.00 0.00 2.87
2779 2945 5.303971 AGTCACCATCAAACAAGAGAGAAG 58.696 41.667 0.00 0.00 0.00 2.85
2780 2946 5.296151 AGTCACCATCAAACAAGAGAGAA 57.704 39.130 0.00 0.00 0.00 2.87
2781 2947 4.963318 AGTCACCATCAAACAAGAGAGA 57.037 40.909 0.00 0.00 0.00 3.10
2782 2948 6.382869 AAAAGTCACCATCAAACAAGAGAG 57.617 37.500 0.00 0.00 0.00 3.20
2783 2949 6.773976 AAAAAGTCACCATCAAACAAGAGA 57.226 33.333 0.00 0.00 0.00 3.10
2900 3070 9.188588 CTAGATTTACTACAATATTTTCCGCGA 57.811 33.333 8.23 0.00 0.00 5.87
2911 3081 9.727627 GTACTACAACGCTAGATTTACTACAAT 57.272 33.333 0.00 0.00 0.00 2.71
2913 3083 8.498054 AGTACTACAACGCTAGATTTACTACA 57.502 34.615 0.00 0.00 0.00 2.74
2915 3085 9.823647 ACTAGTACTACAACGCTAGATTTACTA 57.176 33.333 0.00 0.00 35.96 1.82
2916 3086 8.729805 ACTAGTACTACAACGCTAGATTTACT 57.270 34.615 0.00 0.00 35.96 2.24
2917 3087 9.780413 AAACTAGTACTACAACGCTAGATTTAC 57.220 33.333 0.00 0.00 35.96 2.01
2919 3089 9.136952 CAAAACTAGTACTACAACGCTAGATTT 57.863 33.333 0.00 0.00 37.16 2.17
2920 3090 7.758528 CCAAAACTAGTACTACAACGCTAGATT 59.241 37.037 0.00 0.00 35.96 2.40
2921 3091 7.094032 ACCAAAACTAGTACTACAACGCTAGAT 60.094 37.037 0.00 0.00 35.96 1.98
2922 3092 6.207417 ACCAAAACTAGTACTACAACGCTAGA 59.793 38.462 0.00 0.00 35.96 2.43
2923 3093 6.385033 ACCAAAACTAGTACTACAACGCTAG 58.615 40.000 0.00 0.00 37.52 3.42
2924 3094 6.331369 ACCAAAACTAGTACTACAACGCTA 57.669 37.500 0.00 0.00 0.00 4.26
2925 3095 5.205759 ACCAAAACTAGTACTACAACGCT 57.794 39.130 0.00 0.00 0.00 5.07
3015 3185 9.478019 GTTTTGTTTAGACTGATGATACAATCG 57.522 33.333 0.00 0.00 0.00 3.34
3019 3189 8.902540 AGTGTTTTGTTTAGACTGATGATACA 57.097 30.769 0.00 0.00 0.00 2.29
3020 3190 9.599322 CAAGTGTTTTGTTTAGACTGATGATAC 57.401 33.333 0.00 0.00 0.00 2.24
3021 3191 9.337396 ACAAGTGTTTTGTTTAGACTGATGATA 57.663 29.630 0.00 0.00 0.00 2.15
3022 3192 8.131100 CACAAGTGTTTTGTTTAGACTGATGAT 58.869 33.333 0.00 0.00 0.00 2.45
3096 3275 1.003718 CTCCGTTGGTCCCTTCACC 60.004 63.158 0.00 0.00 36.90 4.02
3127 3306 3.070018 GTCCATATGCGATCCAAGAAGG 58.930 50.000 0.00 0.00 39.47 3.46
3128 3307 3.070018 GGTCCATATGCGATCCAAGAAG 58.930 50.000 0.00 0.00 0.00 2.85
3266 3445 0.968405 TTCAAAGGGCATGGCTCAAC 59.032 50.000 19.78 1.88 0.00 3.18
3283 3462 4.907010 CGTAGCGTATGACTCTCTTCATTC 59.093 45.833 0.00 0.00 37.42 2.67
3394 3583 1.743958 AGCTTATGTACGTCGCTGACT 59.256 47.619 10.11 0.00 0.00 3.41
3420 3609 1.215647 GGATCTAGGGCATACCGCG 59.784 63.158 0.00 0.00 46.96 6.46
3422 3611 1.605058 CCGGGATCTAGGGCATACCG 61.605 65.000 6.59 6.59 46.96 4.02
3450 3644 3.054503 GCAGTGGACCAGCAGCTG 61.055 66.667 16.23 16.23 0.00 4.24
3519 3713 3.000727 CGGACAGGGTGTAATTTGAGAC 58.999 50.000 0.00 0.00 0.00 3.36
3543 3737 0.726827 TCAATGCGATCTTTGGCGAC 59.273 50.000 0.00 0.00 0.00 5.19
3672 3874 1.466167 CCATTGACGACCTTTGAGCAG 59.534 52.381 0.00 0.00 0.00 4.24
3682 3884 2.287915 CCGATCCATTTCCATTGACGAC 59.712 50.000 0.00 0.00 0.00 4.34
3684 3886 2.288666 ACCGATCCATTTCCATTGACG 58.711 47.619 0.00 0.00 0.00 4.35
3712 3914 7.126398 CGTTCAGTACGTTATAGGGTAAGTAC 58.874 42.308 0.00 0.00 45.14 2.73
3790 3993 5.561339 CGCACGTACATACATACTGACCATA 60.561 44.000 0.00 0.00 0.00 2.74
4066 4269 1.754803 TCTACCTGATTAGCACCACCG 59.245 52.381 0.00 0.00 0.00 4.94
4068 4271 3.532542 GGTTCTACCTGATTAGCACCAC 58.467 50.000 0.00 0.00 35.92 4.16
4143 4346 4.680237 CGGGCGTCAGGTGCTTCA 62.680 66.667 0.00 0.00 0.00 3.02
4318 4521 3.853698 TACCAGGGTGGGCGCAAAC 62.854 63.158 10.83 6.42 43.37 2.93
4321 4524 4.108299 CATACCAGGGTGGGCGCA 62.108 66.667 10.83 0.00 43.37 6.09
4338 4541 4.897856 AAAACCGTGCGTGCGTGC 62.898 61.111 0.00 0.00 0.00 5.34
4360 4567 9.914131 TCTTCTGATCAGAATTATATAACCACG 57.086 33.333 32.75 18.67 45.40 4.94
4384 4592 1.864435 GCGACGCGGTTAGAATGATCT 60.864 52.381 12.47 0.00 39.82 2.75
4385 4593 0.503117 GCGACGCGGTTAGAATGATC 59.497 55.000 12.47 0.00 0.00 2.92
4386 4594 2.589890 GCGACGCGGTTAGAATGAT 58.410 52.632 12.47 0.00 0.00 2.45
4398 4606 4.754818 GAAACGAGCACGCGACGC 62.755 66.667 15.93 15.80 43.96 5.19
4437 4651 0.249280 TTCAGCGTCGACTTGAGCAA 60.249 50.000 14.70 0.37 0.00 3.91
4517 4731 3.432378 GTCCTTGAGGAGGTTACTCAGA 58.568 50.000 0.00 0.00 46.49 3.27
4648 4865 4.998788 ACCTGCTGAAGTTTTTCTTTGAC 58.001 39.130 0.00 0.00 36.40 3.18
4665 4882 3.785859 TGGGCTCGATGGACCTGC 61.786 66.667 0.00 0.00 34.90 4.85
4786 5111 0.036306 TCTTCTTCGCCCTTGGGTTC 59.964 55.000 7.61 0.00 0.00 3.62
4826 5157 3.042682 TCTTCACCTGTACCACAAGGAA 58.957 45.455 4.07 0.00 38.69 3.36
4827 5158 2.684943 TCTTCACCTGTACCACAAGGA 58.315 47.619 4.07 0.00 38.69 3.36
4828 5159 3.071023 TCTTCTTCACCTGTACCACAAGG 59.929 47.826 0.00 0.00 42.21 3.61
4829 5160 4.336889 TCTTCTTCACCTGTACCACAAG 57.663 45.455 0.00 0.00 0.00 3.16
4933 5264 2.413765 GTCTCCTCCACGATCCGC 59.586 66.667 0.00 0.00 0.00 5.54
5007 5338 4.908156 CAGAAGAAAATCTCGTTTGTGCAG 59.092 41.667 0.00 0.00 0.00 4.41
5009 5340 4.906437 GTCAGAAGAAAATCTCGTTTGTGC 59.094 41.667 0.00 0.00 0.00 4.57
5011 5342 4.211374 CGGTCAGAAGAAAATCTCGTTTGT 59.789 41.667 0.00 0.00 0.00 2.83
5012 5343 4.211374 ACGGTCAGAAGAAAATCTCGTTTG 59.789 41.667 0.00 0.00 27.02 2.93
5014 5345 3.991367 ACGGTCAGAAGAAAATCTCGTT 58.009 40.909 0.00 0.00 27.02 3.85
5015 5346 3.662247 ACGGTCAGAAGAAAATCTCGT 57.338 42.857 0.00 0.00 0.00 4.18
5016 5347 5.162075 ACTAACGGTCAGAAGAAAATCTCG 58.838 41.667 0.00 0.00 0.00 4.04
5049 5384 0.846015 CCATCCAGGAGCCATGGTTA 59.154 55.000 14.67 0.00 41.22 2.85
5063 5398 1.226379 CACGCACGCAAATCCATCC 60.226 57.895 0.00 0.00 0.00 3.51
5156 5491 1.795768 TGTGGCTGAACATCTCGAAC 58.204 50.000 0.00 0.00 0.00 3.95
5345 5680 4.778143 AACCCATCCAGTCGCGCC 62.778 66.667 0.00 0.00 0.00 6.53
5346 5681 2.746277 AAACCCATCCAGTCGCGC 60.746 61.111 0.00 0.00 0.00 6.86
5347 5682 1.375396 TCAAACCCATCCAGTCGCG 60.375 57.895 0.00 0.00 0.00 5.87
5348 5683 1.635663 CGTCAAACCCATCCAGTCGC 61.636 60.000 0.00 0.00 0.00 5.19
5349 5684 0.320421 ACGTCAAACCCATCCAGTCG 60.320 55.000 0.00 0.00 0.00 4.18
5350 5685 2.754946 TACGTCAAACCCATCCAGTC 57.245 50.000 0.00 0.00 0.00 3.51
5351 5686 2.635915 TCTTACGTCAAACCCATCCAGT 59.364 45.455 0.00 0.00 0.00 4.00
5352 5687 3.328382 TCTTACGTCAAACCCATCCAG 57.672 47.619 0.00 0.00 0.00 3.86
5353 5688 3.773418 TTCTTACGTCAAACCCATCCA 57.227 42.857 0.00 0.00 0.00 3.41
5354 5689 5.182380 TCAATTTCTTACGTCAAACCCATCC 59.818 40.000 0.00 0.00 0.00 3.51
5355 5690 6.249035 TCAATTTCTTACGTCAAACCCATC 57.751 37.500 0.00 0.00 0.00 3.51
5356 5691 6.834168 ATCAATTTCTTACGTCAAACCCAT 57.166 33.333 0.00 0.00 0.00 4.00
5420 5762 7.675637 GCAATCCTTATACAAACTAACGTGGTC 60.676 40.741 0.00 0.00 0.00 4.02
5487 5836 9.023962 ACTGGATGCAAAAAGAACATTATTCTA 57.976 29.630 0.00 0.00 0.00 2.10
5492 5841 6.680810 CAGACTGGATGCAAAAAGAACATTA 58.319 36.000 0.00 0.00 0.00 1.90
5559 5910 4.520874 TGGATTTTTACCGAGTTGCAATCA 59.479 37.500 0.59 0.00 0.00 2.57
5578 5932 5.296780 CGGTATATGTGAAGCACTTTTGGAT 59.703 40.000 0.00 0.00 35.11 3.41
5590 5944 1.134936 AGCACGCACGGTATATGTGAA 60.135 47.619 11.11 0.00 39.73 3.18
5601 5955 0.179192 AATGTATGCAAGCACGCACG 60.179 50.000 1.79 0.00 46.56 5.34
5610 5964 6.763715 AAGGAGGGAGTATAATGTATGCAA 57.236 37.500 0.00 0.00 0.00 4.08
5614 5968 7.947782 TTGGAAAGGAGGGAGTATAATGTAT 57.052 36.000 0.00 0.00 0.00 2.29
5624 5978 5.536538 GCCTTATATTTTGGAAAGGAGGGAG 59.463 44.000 4.19 0.00 40.85 4.30
5625 5979 5.454966 GCCTTATATTTTGGAAAGGAGGGA 58.545 41.667 4.19 0.00 40.85 4.20
5626 5980 4.278419 CGCCTTATATTTTGGAAAGGAGGG 59.722 45.833 4.19 0.00 40.85 4.30
5627 5981 4.887655 ACGCCTTATATTTTGGAAAGGAGG 59.112 41.667 4.19 0.00 41.54 4.30
5628 5982 5.277345 CGACGCCTTATATTTTGGAAAGGAG 60.277 44.000 4.19 3.40 42.52 3.69
5629 5983 4.573201 CGACGCCTTATATTTTGGAAAGGA 59.427 41.667 4.19 0.00 40.85 3.36
5630 5984 4.261031 CCGACGCCTTATATTTTGGAAAGG 60.261 45.833 0.00 0.00 41.23 3.11
5631 5985 4.334481 ACCGACGCCTTATATTTTGGAAAG 59.666 41.667 0.00 0.00 0.00 2.62
5632 5986 4.263435 ACCGACGCCTTATATTTTGGAAA 58.737 39.130 0.00 0.00 0.00 3.13
5633 5987 3.876341 ACCGACGCCTTATATTTTGGAA 58.124 40.909 0.00 0.00 0.00 3.53
5634 5988 3.547054 ACCGACGCCTTATATTTTGGA 57.453 42.857 0.00 0.00 0.00 3.53
5635 5989 4.753107 ACATACCGACGCCTTATATTTTGG 59.247 41.667 0.00 0.00 0.00 3.28
5636 5990 5.694910 AGACATACCGACGCCTTATATTTTG 59.305 40.000 0.00 0.00 0.00 2.44
5637 5991 5.850614 AGACATACCGACGCCTTATATTTT 58.149 37.500 0.00 0.00 0.00 1.82
5638 5992 5.464030 AGACATACCGACGCCTTATATTT 57.536 39.130 0.00 0.00 0.00 1.40
5639 5993 6.770746 ATAGACATACCGACGCCTTATATT 57.229 37.500 0.00 0.00 0.00 1.28
5640 5994 7.870509 TTATAGACATACCGACGCCTTATAT 57.129 36.000 0.00 0.00 0.00 0.86
5641 5995 7.686438 TTTATAGACATACCGACGCCTTATA 57.314 36.000 0.00 0.00 0.00 0.98
5642 5996 6.579666 TTTATAGACATACCGACGCCTTAT 57.420 37.500 0.00 0.00 0.00 1.73
5643 5997 6.389830 TTTTATAGACATACCGACGCCTTA 57.610 37.500 0.00 0.00 0.00 2.69
5644 5998 4.924305 TTTATAGACATACCGACGCCTT 57.076 40.909 0.00 0.00 0.00 4.35
5645 5999 4.924305 TTTTATAGACATACCGACGCCT 57.076 40.909 0.00 0.00 0.00 5.52
5646 6000 7.642071 TTAATTTTATAGACATACCGACGCC 57.358 36.000 0.00 0.00 0.00 5.68
5695 6049 8.784176 GACATTGTTGTATTTGTTTTGCAAAAC 58.216 29.630 36.78 36.78 42.24 2.43
5696 6050 7.689812 CGACATTGTTGTATTTGTTTTGCAAAA 59.310 29.630 20.46 20.46 42.24 2.44
5697 6051 7.148573 ACGACATTGTTGTATTTGTTTTGCAAA 60.149 29.630 8.05 8.05 42.71 3.68
5698 6052 6.311445 ACGACATTGTTGTATTTGTTTTGCAA 59.689 30.769 7.95 0.00 35.79 4.08
5699 6053 5.807520 ACGACATTGTTGTATTTGTTTTGCA 59.192 32.000 7.95 0.00 35.79 4.08
5700 6054 6.267500 ACGACATTGTTGTATTTGTTTTGC 57.733 33.333 7.95 0.00 35.79 3.68
5730 6084 9.778741 ATACATCGAAGTACATGGATTAAACAT 57.221 29.630 2.07 0.00 0.00 2.71
5731 6085 9.256477 GATACATCGAAGTACATGGATTAAACA 57.744 33.333 2.07 0.00 0.00 2.83
5732 6086 9.256477 TGATACATCGAAGTACATGGATTAAAC 57.744 33.333 2.07 0.00 0.00 2.01
5733 6087 9.825109 TTGATACATCGAAGTACATGGATTAAA 57.175 29.630 2.07 0.00 0.00 1.52
5734 6088 9.825109 TTTGATACATCGAAGTACATGGATTAA 57.175 29.630 2.07 0.00 0.00 1.40
5735 6089 9.476202 CTTTGATACATCGAAGTACATGGATTA 57.524 33.333 2.07 0.00 41.38 1.75
5736 6090 8.204160 TCTTTGATACATCGAAGTACATGGATT 58.796 33.333 15.64 0.00 44.82 3.01
5737 6091 7.653713 GTCTTTGATACATCGAAGTACATGGAT 59.346 37.037 15.64 0.00 44.82 3.41
5738 6092 6.978659 GTCTTTGATACATCGAAGTACATGGA 59.021 38.462 15.64 0.00 44.82 3.41
5739 6093 6.980978 AGTCTTTGATACATCGAAGTACATGG 59.019 38.462 15.64 1.47 44.82 3.66
5740 6094 7.489435 ACAGTCTTTGATACATCGAAGTACATG 59.511 37.037 15.64 12.73 44.82 3.21
5741 6095 7.489435 CACAGTCTTTGATACATCGAAGTACAT 59.511 37.037 15.64 0.00 44.82 2.29
5742 6096 6.806739 CACAGTCTTTGATACATCGAAGTACA 59.193 38.462 15.64 1.38 44.82 2.90
5743 6097 6.237595 GCACAGTCTTTGATACATCGAAGTAC 60.238 42.308 15.64 12.83 44.82 2.73
5744 6098 5.805486 GCACAGTCTTTGATACATCGAAGTA 59.195 40.000 15.64 2.58 44.82 2.24
5745 6099 4.627467 GCACAGTCTTTGATACATCGAAGT 59.373 41.667 15.64 0.00 44.82 3.01
5746 6100 4.627035 TGCACAGTCTTTGATACATCGAAG 59.373 41.667 11.53 11.53 45.55 3.79
5747 6101 4.388773 GTGCACAGTCTTTGATACATCGAA 59.611 41.667 13.17 0.00 0.00 3.71
5748 6102 3.926527 GTGCACAGTCTTTGATACATCGA 59.073 43.478 13.17 0.00 0.00 3.59
5749 6103 3.679502 TGTGCACAGTCTTTGATACATCG 59.320 43.478 17.42 0.00 0.00 3.84
5750 6104 5.213913 CTGTGCACAGTCTTTGATACATC 57.786 43.478 34.04 0.00 39.09 3.06
5764 6118 1.506309 GGCGTGATTGACTGTGCACA 61.506 55.000 20.37 20.37 0.00 4.57
5765 6119 1.207593 GGCGTGATTGACTGTGCAC 59.792 57.895 10.75 10.75 0.00 4.57
5766 6120 0.534877 AAGGCGTGATTGACTGTGCA 60.535 50.000 0.00 0.00 0.00 4.57
5767 6121 1.438651 TAAGGCGTGATTGACTGTGC 58.561 50.000 0.00 0.00 0.00 4.57
5768 6122 5.991328 AATATAAGGCGTGATTGACTGTG 57.009 39.130 0.00 0.00 0.00 3.66
5769 6123 6.183360 CCAAAATATAAGGCGTGATTGACTGT 60.183 38.462 0.00 0.00 0.00 3.55
5770 6124 6.201517 CCAAAATATAAGGCGTGATTGACTG 58.798 40.000 0.00 0.00 0.00 3.51
5771 6125 5.299279 CCCAAAATATAAGGCGTGATTGACT 59.701 40.000 0.00 0.00 0.00 3.41
5772 6126 5.298276 TCCCAAAATATAAGGCGTGATTGAC 59.702 40.000 0.00 0.00 0.00 3.18
5773 6127 5.441500 TCCCAAAATATAAGGCGTGATTGA 58.558 37.500 0.00 0.00 0.00 2.57
5774 6128 5.766150 TCCCAAAATATAAGGCGTGATTG 57.234 39.130 0.00 0.00 0.00 2.67
5775 6129 5.301805 CCTTCCCAAAATATAAGGCGTGATT 59.698 40.000 0.00 0.00 32.66 2.57
5776 6130 4.827284 CCTTCCCAAAATATAAGGCGTGAT 59.173 41.667 0.00 0.00 32.66 3.06
5777 6131 4.080243 TCCTTCCCAAAATATAAGGCGTGA 60.080 41.667 0.00 0.00 38.70 4.35
5778 6132 4.204012 TCCTTCCCAAAATATAAGGCGTG 58.796 43.478 0.00 0.00 38.70 5.34
5779 6133 4.461198 CTCCTTCCCAAAATATAAGGCGT 58.539 43.478 0.00 0.00 38.70 5.68
5780 6134 3.821033 CCTCCTTCCCAAAATATAAGGCG 59.179 47.826 0.00 0.00 38.70 5.52
5781 6135 4.141018 TCCCTCCTTCCCAAAATATAAGGC 60.141 45.833 0.00 0.00 38.70 4.35
5782 6136 5.134509 ACTCCCTCCTTCCCAAAATATAAGG 59.865 44.000 0.00 0.00 39.93 2.69
5783 6137 6.267492 ACTCCCTCCTTCCCAAAATATAAG 57.733 41.667 0.00 0.00 0.00 1.73
5784 6138 7.964730 ATACTCCCTCCTTCCCAAAATATAA 57.035 36.000 0.00 0.00 0.00 0.98
5785 6139 7.964730 AATACTCCCTCCTTCCCAAAATATA 57.035 36.000 0.00 0.00 0.00 0.86
5786 6140 6.865651 AATACTCCCTCCTTCCCAAAATAT 57.134 37.500 0.00 0.00 0.00 1.28
5787 6141 6.102174 GGTAATACTCCCTCCTTCCCAAAATA 59.898 42.308 0.00 0.00 0.00 1.40
5788 6142 5.103643 GGTAATACTCCCTCCTTCCCAAAAT 60.104 44.000 0.00 0.00 0.00 1.82
5789 6143 4.228895 GGTAATACTCCCTCCTTCCCAAAA 59.771 45.833 0.00 0.00 0.00 2.44
5790 6144 3.784202 GGTAATACTCCCTCCTTCCCAAA 59.216 47.826 0.00 0.00 0.00 3.28
5791 6145 3.014807 AGGTAATACTCCCTCCTTCCCAA 59.985 47.826 0.00 0.00 0.00 4.12
5792 6146 2.595380 AGGTAATACTCCCTCCTTCCCA 59.405 50.000 0.00 0.00 0.00 4.37
5793 6147 3.347759 AGGTAATACTCCCTCCTTCCC 57.652 52.381 0.00 0.00 0.00 3.97
5794 6148 5.664457 TGTTTAGGTAATACTCCCTCCTTCC 59.336 44.000 0.00 0.00 32.08 3.46
5795 6149 6.155737 TGTGTTTAGGTAATACTCCCTCCTTC 59.844 42.308 0.00 0.00 32.08 3.46
5796 6150 6.027482 TGTGTTTAGGTAATACTCCCTCCTT 58.973 40.000 0.00 0.00 32.08 3.36
5797 6151 5.596763 TGTGTTTAGGTAATACTCCCTCCT 58.403 41.667 0.00 0.00 32.08 3.69
5798 6152 5.945144 TGTGTTTAGGTAATACTCCCTCC 57.055 43.478 0.00 0.00 32.08 4.30
5799 6153 8.803397 ATTTTGTGTTTAGGTAATACTCCCTC 57.197 34.615 0.00 0.00 32.08 4.30
5800 6154 9.596308 AAATTTTGTGTTTAGGTAATACTCCCT 57.404 29.630 0.00 0.00 34.74 4.20
5828 6182 9.774742 CCAGAAAGCAAGAAGTATATGTTTAAC 57.225 33.333 0.00 0.00 0.00 2.01
5829 6183 9.515226 ACCAGAAAGCAAGAAGTATATGTTTAA 57.485 29.630 0.00 0.00 0.00 1.52
5830 6184 9.515226 AACCAGAAAGCAAGAAGTATATGTTTA 57.485 29.630 0.00 0.00 0.00 2.01
5831 6185 8.409358 AACCAGAAAGCAAGAAGTATATGTTT 57.591 30.769 0.00 0.00 0.00 2.83
5832 6186 7.665559 TGAACCAGAAAGCAAGAAGTATATGTT 59.334 33.333 0.00 0.00 0.00 2.71
5833 6187 7.168219 TGAACCAGAAAGCAAGAAGTATATGT 58.832 34.615 0.00 0.00 0.00 2.29
5834 6188 7.615582 TGAACCAGAAAGCAAGAAGTATATG 57.384 36.000 0.00 0.00 0.00 1.78
5835 6189 6.317391 GCTGAACCAGAAAGCAAGAAGTATAT 59.683 38.462 0.00 0.00 36.91 0.86
5836 6190 5.643777 GCTGAACCAGAAAGCAAGAAGTATA 59.356 40.000 0.00 0.00 36.91 1.47
5837 6191 4.457257 GCTGAACCAGAAAGCAAGAAGTAT 59.543 41.667 0.00 0.00 36.91 2.12
5838 6192 3.815401 GCTGAACCAGAAAGCAAGAAGTA 59.185 43.478 0.00 0.00 36.91 2.24
5839 6193 2.620585 GCTGAACCAGAAAGCAAGAAGT 59.379 45.455 0.00 0.00 36.91 3.01
5840 6194 2.883386 AGCTGAACCAGAAAGCAAGAAG 59.117 45.455 0.00 0.00 39.47 2.85
5841 6195 2.936202 AGCTGAACCAGAAAGCAAGAA 58.064 42.857 0.00 0.00 39.47 2.52
5842 6196 2.645838 AGCTGAACCAGAAAGCAAGA 57.354 45.000 0.00 0.00 39.47 3.02
5843 6197 3.067180 TCAAAGCTGAACCAGAAAGCAAG 59.933 43.478 0.00 0.00 39.47 4.01
5844 6198 3.023119 TCAAAGCTGAACCAGAAAGCAA 58.977 40.909 0.00 0.00 39.47 3.91
5845 6199 2.653726 TCAAAGCTGAACCAGAAAGCA 58.346 42.857 0.00 0.00 39.47 3.91
5846 6200 3.636381 CTTCAAAGCTGAACCAGAAAGC 58.364 45.455 0.00 0.00 36.62 3.51
5860 6214 7.743104 ACGTATTCTGTTTCATAGCTTCAAAG 58.257 34.615 0.00 0.00 0.00 2.77
5861 6215 7.602644 AGACGTATTCTGTTTCATAGCTTCAAA 59.397 33.333 0.00 0.00 31.12 2.69
5862 6216 7.063426 CAGACGTATTCTGTTTCATAGCTTCAA 59.937 37.037 0.00 0.00 46.12 2.69
5863 6217 6.531594 CAGACGTATTCTGTTTCATAGCTTCA 59.468 38.462 0.00 0.00 46.12 3.02
5864 6218 6.927746 CAGACGTATTCTGTTTCATAGCTTC 58.072 40.000 0.00 0.00 46.12 3.86
5865 6219 6.893958 CAGACGTATTCTGTTTCATAGCTT 57.106 37.500 0.00 0.00 46.12 3.74
5921 6275 3.386932 AAGCAGGGCCTAATTCATGAA 57.613 42.857 11.26 11.26 0.00 2.57
5937 6291 1.339055 GGATGTGTCTGGTGCTAAGCA 60.339 52.381 0.00 0.00 35.60 3.91
5938 6292 1.065854 AGGATGTGTCTGGTGCTAAGC 60.066 52.381 0.00 0.00 0.00 3.09
6177 6550 1.459592 CAAGCCGCTGTAGTGTTGTAC 59.540 52.381 0.00 0.00 0.00 2.90
6195 6568 1.619827 CAAAATGCAGGGAGGCTTCAA 59.380 47.619 0.00 0.00 34.04 2.69
6197 6570 1.260544 ACAAAATGCAGGGAGGCTTC 58.739 50.000 0.00 0.00 34.04 3.86
6217 6590 2.622942 GTCTGTGGCAAACATTCCTGAA 59.377 45.455 0.00 0.00 38.39 3.02
6235 6608 1.682684 CTCACTAGCGGGTGGGTCT 60.683 63.158 11.10 0.00 37.75 3.85
6236 6609 1.255667 TTCTCACTAGCGGGTGGGTC 61.256 60.000 10.78 0.00 38.69 4.46
6264 6637 3.962021 GCGGTTTGCAAGCTAAGGAACT 61.962 50.000 13.27 0.00 45.45 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.