Multiple sequence alignment - TraesCS2D01G385900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G385900 chr2D 100.000 4168 0 0 1 4168 490682242 490678075 0.000000e+00 7697.0
1 TraesCS2D01G385900 chr2D 100.000 1336 0 0 4635 5970 490677608 490676273 0.000000e+00 2468.0
2 TraesCS2D01G385900 chr2D 95.506 178 6 1 1936 2111 560959485 560959662 3.520000e-72 283.0
3 TraesCS2D01G385900 chr2D 94.505 182 8 1 1933 2112 386961608 386961427 4.560000e-71 279.0
4 TraesCS2D01G385900 chr2D 82.515 326 40 13 3488 3807 412849092 412849406 2.740000e-68 270.0
5 TraesCS2D01G385900 chr2D 92.233 103 6 2 4730 4831 49201080 49200979 1.730000e-30 145.0
6 TraesCS2D01G385900 chr2D 100.000 41 0 0 5492 5532 578641440 578641400 6.420000e-10 76.8
7 TraesCS2D01G385900 chr2B 95.051 1960 67 15 2 1938 575150372 575148420 0.000000e+00 3055.0
8 TraesCS2D01G385900 chr2B 92.585 917 67 1 2416 3332 575147986 575147071 0.000000e+00 1315.0
9 TraesCS2D01G385900 chr2B 94.911 393 11 5 4814 5199 575145890 575145500 1.840000e-169 606.0
10 TraesCS2D01G385900 chr2B 95.925 319 12 1 2097 2414 575148422 575148104 3.190000e-142 516.0
11 TraesCS2D01G385900 chr2B 93.697 238 14 1 3812 4049 575146843 575146607 7.360000e-94 355.0
12 TraesCS2D01G385900 chr2B 91.518 224 15 1 5266 5489 575145497 575145278 7.520000e-79 305.0
13 TraesCS2D01G385900 chr2B 85.714 301 22 10 5675 5970 575143305 575143021 1.260000e-76 298.0
14 TraesCS2D01G385900 chr2B 96.045 177 4 2 1939 2112 28427334 28427158 9.790000e-73 285.0
15 TraesCS2D01G385900 chr2B 86.538 208 17 6 5706 5912 574692029 574691832 1.010000e-52 219.0
16 TraesCS2D01G385900 chr2B 94.915 118 6 0 4051 4168 575146478 575146361 1.020000e-42 185.0
17 TraesCS2D01G385900 chr2B 95.455 66 3 0 5618 5683 575144822 575144757 8.180000e-19 106.0
18 TraesCS2D01G385900 chr2B 85.714 105 8 4 5649 5751 574692125 574692026 2.940000e-18 104.0
19 TraesCS2D01G385900 chr2A 94.294 1034 46 7 879 1910 634618747 634617725 0.000000e+00 1570.0
20 TraesCS2D01G385900 chr2A 90.373 1153 92 9 2097 3248 634617698 634616564 0.000000e+00 1496.0
21 TraesCS2D01G385900 chr2A 93.441 869 46 7 2 864 634619840 634618977 0.000000e+00 1279.0
22 TraesCS2D01G385900 chr2A 93.782 386 24 0 4814 5199 634615421 634615036 1.120000e-161 580.0
23 TraesCS2D01G385900 chr2A 92.011 363 17 9 3812 4166 634616256 634615898 3.210000e-137 499.0
24 TraesCS2D01G385900 chr2A 93.478 276 15 3 5616 5890 634614813 634614540 2.000000e-109 407.0
25 TraesCS2D01G385900 chr2A 92.411 224 12 3 5266 5489 634615033 634614815 1.250000e-81 315.0
26 TraesCS2D01G385900 chr2A 86.508 126 13 4 3285 3409 634616564 634616442 1.040000e-27 135.0
27 TraesCS2D01G385900 chr1A 87.425 334 24 6 3488 3805 546329766 546329435 9.450000e-98 368.0
28 TraesCS2D01G385900 chr1A 95.833 72 1 2 5195 5265 368368349 368368419 1.360000e-21 115.0
29 TraesCS2D01G385900 chr3D 88.411 302 27 7 3510 3806 437473369 437473071 2.050000e-94 357.0
30 TraesCS2D01G385900 chr3D 86.392 316 35 6 3506 3815 30369193 30368880 7.410000e-89 339.0
31 TraesCS2D01G385900 chr3D 97.101 69 2 0 5197 5265 598889894 598889826 3.780000e-22 117.0
32 TraesCS2D01G385900 chr3D 82.014 139 8 7 5490 5611 25542454 25542316 1.060000e-17 102.0
33 TraesCS2D01G385900 chr5D 86.103 331 34 11 3488 3814 263353225 263352903 4.430000e-91 346.0
34 TraesCS2D01G385900 chr5D 95.082 183 6 2 1933 2112 358173824 358174006 9.790000e-73 285.0
35 TraesCS2D01G385900 chr5D 84.291 261 34 5 3552 3807 3237743 3238001 1.280000e-61 248.0
36 TraesCS2D01G385900 chr5D 85.443 158 6 3 5488 5628 564950128 564950285 1.340000e-31 148.0
37 TraesCS2D01G385900 chr5D 86.301 146 3 1 5490 5618 44114900 44115045 6.240000e-30 143.0
38 TraesCS2D01G385900 chr5D 95.833 72 3 0 5194 5265 150835733 150835662 3.780000e-22 117.0
39 TraesCS2D01G385900 chr4B 85.630 341 32 11 3480 3805 658531324 658531662 5.730000e-90 342.0
40 TraesCS2D01G385900 chr4B 80.882 340 42 11 3485 3807 661170003 661169670 4.620000e-61 246.0
41 TraesCS2D01G385900 chr4B 78.571 336 49 9 3487 3805 17364694 17364365 3.650000e-47 200.0
42 TraesCS2D01G385900 chr4B 83.784 148 7 9 5484 5614 419584925 419584778 2.260000e-24 124.0
43 TraesCS2D01G385900 chr4B 97.059 68 2 0 5198 5265 28724304 28724237 1.360000e-21 115.0
44 TraesCS2D01G385900 chr7A 87.375 301 27 9 3480 3776 27865973 27866266 9.590000e-88 335.0
45 TraesCS2D01G385900 chr7A 93.902 82 5 0 5534 5615 55363572 55363653 2.260000e-24 124.0
46 TraesCS2D01G385900 chr7A 97.183 71 2 0 5195 5265 13233016 13232946 2.920000e-23 121.0
47 TraesCS2D01G385900 chr7A 97.183 71 2 0 5195 5265 13234478 13234408 2.920000e-23 121.0
48 TraesCS2D01G385900 chr7A 81.119 143 9 9 5492 5617 126482613 126482472 1.370000e-16 99.0
49 TraesCS2D01G385900 chr3A 85.321 327 36 11 3488 3809 166156161 166155842 1.600000e-85 327.0
50 TraesCS2D01G385900 chr3A 88.087 277 27 4 3531 3806 575481562 575481291 2.080000e-84 324.0
51 TraesCS2D01G385900 chr3A 93.182 88 6 0 5533 5620 643764791 643764878 4.860000e-26 130.0
52 TraesCS2D01G385900 chr3A 91.111 90 6 2 5534 5622 54664319 54664231 2.920000e-23 121.0
53 TraesCS2D01G385900 chr3A 95.652 46 1 1 5490 5535 643757367 643757411 8.300000e-09 73.1
54 TraesCS2D01G385900 chr5B 87.285 291 30 5 3488 3776 295943187 295942902 5.770000e-85 326.0
55 TraesCS2D01G385900 chr5B 85.959 292 27 10 3492 3776 103326115 103325831 3.500000e-77 300.0
56 TraesCS2D01G385900 chr5B 86.937 222 17 9 3487 3707 517231192 517230982 7.730000e-59 239.0
57 TraesCS2D01G385900 chr5B 82.879 257 40 4 3500 3754 111709040 111709294 1.670000e-55 228.0
58 TraesCS2D01G385900 chr5B 92.857 84 6 0 5534 5617 563604600 563604683 8.130000e-24 122.0
59 TraesCS2D01G385900 chr5B 82.143 140 8 7 5490 5612 103704701 103704562 2.940000e-18 104.0
60 TraesCS2D01G385900 chr6A 85.061 328 37 10 3488 3810 117417039 117416719 2.080000e-84 324.0
61 TraesCS2D01G385900 chr6A 81.126 302 32 10 3489 3776 580302611 580302901 1.010000e-52 219.0
62 TraesCS2D01G385900 chr6A 81.679 262 31 14 3512 3764 555978892 555978639 1.010000e-47 202.0
63 TraesCS2D01G385900 chr6A 82.805 221 30 8 3487 3703 30451262 30451046 2.200000e-44 191.0
64 TraesCS2D01G385900 chr6A 96.667 90 3 0 4731 4820 538048084 538047995 3.730000e-32 150.0
65 TraesCS2D01G385900 chr6A 84.722 144 5 8 5488 5614 188450131 188449988 1.750000e-25 128.0
66 TraesCS2D01G385900 chr1B 85.948 306 33 8 3506 3806 622600637 622600937 9.660000e-83 318.0
67 TraesCS2D01G385900 chr1B 98.837 86 1 0 4731 4816 154165147 154165062 2.880000e-33 154.0
68 TraesCS2D01G385900 chr5A 86.833 281 29 6 3488 3766 349493432 349493706 2.090000e-79 307.0
69 TraesCS2D01G385900 chr5A 86.477 281 31 6 3488 3766 349543544 349543819 9.720000e-78 302.0
70 TraesCS2D01G385900 chr5A 84.818 303 36 7 3507 3806 569077271 569076976 4.520000e-76 296.0
71 TraesCS2D01G385900 chr5A 91.388 209 10 7 1906 2109 206730822 206731027 4.560000e-71 279.0
72 TraesCS2D01G385900 chr5A 95.699 93 4 0 4724 4816 582630675 582630767 3.730000e-32 150.0
73 TraesCS2D01G385900 chr4D 96.089 179 5 1 1933 2109 42628905 42629083 2.100000e-74 291.0
74 TraesCS2D01G385900 chr4D 79.882 338 44 14 3488 3806 502043025 502043357 6.020000e-55 226.0
75 TraesCS2D01G385900 chr4D 80.714 280 42 11 3507 3782 20566950 20566679 2.180000e-49 207.0
76 TraesCS2D01G385900 chr4D 78.107 338 46 16 3488 3808 477408891 477409217 7.900000e-44 189.0
77 TraesCS2D01G385900 chr4D 78.947 304 36 17 3523 3806 502039857 502040152 1.320000e-41 182.0
78 TraesCS2D01G385900 chr4D 86.667 135 14 4 3488 3619 308390883 308390750 4.820000e-31 147.0
79 TraesCS2D01G385900 chr4D 93.000 100 5 1 4718 4815 245478437 245478338 1.730000e-30 145.0
80 TraesCS2D01G385900 chr4D 93.000 100 5 1 4718 4815 282079933 282080032 1.730000e-30 145.0
81 TraesCS2D01G385900 chr4D 90.000 90 9 0 5535 5624 52777215 52777304 3.780000e-22 117.0
82 TraesCS2D01G385900 chr3B 96.111 180 3 3 1927 2103 628473373 628473551 2.100000e-74 291.0
83 TraesCS2D01G385900 chr3B 88.889 117 9 4 4705 4819 802996086 802995972 2.240000e-29 141.0
84 TraesCS2D01G385900 chr7D 96.532 173 4 1 1935 2105 192936019 192936191 9.790000e-73 285.0
85 TraesCS2D01G385900 chr7D 81.121 339 48 14 3488 3816 603730921 603731253 2.130000e-64 257.0
86 TraesCS2D01G385900 chr7B 95.531 179 6 1 1933 2109 30748172 30747994 9.790000e-73 285.0
87 TraesCS2D01G385900 chr7B 79.817 327 49 14 3488 3804 63125050 63125369 7.790000e-54 222.0
88 TraesCS2D01G385900 chr7B 97.753 89 1 1 4731 4819 740996240 740996153 1.040000e-32 152.0
89 TraesCS2D01G385900 chr7B 97.101 69 2 0 5197 5265 682239791 682239859 3.780000e-22 117.0
90 TraesCS2D01G385900 chr7B 86.538 104 10 4 5164 5265 140935716 140935615 1.760000e-20 111.0
91 TraesCS2D01G385900 chr6D 80.864 324 48 12 3488 3803 82639751 82640068 5.980000e-60 243.0
92 TraesCS2D01G385900 chr6D 81.173 324 39 15 3489 3804 73380281 73380590 2.150000e-59 241.0
93 TraesCS2D01G385900 chr6D 81.040 327 38 18 3488 3804 73407705 73408017 7.730000e-59 239.0
94 TraesCS2D01G385900 chr6D 80.427 281 40 9 3489 3756 307322 307044 3.650000e-47 200.0
95 TraesCS2D01G385900 chr1D 81.905 315 31 12 3506 3804 393731590 393731286 5.980000e-60 243.0
96 TraesCS2D01G385900 chr1D 80.240 334 43 15 3487 3806 329024954 329024630 4.650000e-56 230.0
97 TraesCS2D01G385900 chr1D 82.791 215 32 5 3488 3700 461202867 461202656 2.840000e-43 187.0
98 TraesCS2D01G385900 chr1D 93.617 94 5 1 4730 4823 462985147 462985055 8.070000e-29 139.0
99 TraesCS2D01G385900 chr1D 93.976 83 5 0 5534 5616 401359668 401359750 6.280000e-25 126.0
100 TraesCS2D01G385900 chr1D 93.976 83 5 0 5534 5616 401437123 401437205 6.280000e-25 126.0
101 TraesCS2D01G385900 chrUn 94.595 74 4 0 5191 5264 116432594 116432667 1.360000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G385900 chr2D 490676273 490682242 5969 True 5082.500 7697 100.000000 1 5970 2 chr2D.!!$R4 5969
1 TraesCS2D01G385900 chr2B 575143021 575150372 7351 True 749.000 3055 93.307889 2 5970 9 chr2B.!!$R3 5968
2 TraesCS2D01G385900 chr2A 634614540 634619840 5300 True 785.125 1570 92.037250 2 5890 8 chr2A.!!$R1 5888
3 TraesCS2D01G385900 chr4D 502039857 502043357 3500 False 204.000 226 79.414500 3488 3806 2 chr4D.!!$F5 318

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
701 709 0.321298 ACCCCAAAATCGGACGTCAG 60.321 55.000 18.91 14.28 0.00 3.51 F
993 1224 2.284847 CCCAAAGCCCCAAGCCAT 60.285 61.111 0.00 0.00 45.47 4.40 F
2592 2941 2.208431 GCAGTCACATAGATCAGGTGC 58.792 52.381 0.00 0.00 38.83 5.01 F
3604 4157 0.593128 GCAGTGCTTCGTTGGTGAAT 59.407 50.000 8.18 0.00 0.00 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2589 2938 0.405585 ATGTGGGGGCCATATAGCAC 59.594 55.000 4.39 0.00 33.62 4.40 R
2602 2951 1.542547 GGCCTACGGTTGATATGTGGG 60.543 57.143 0.00 0.00 37.32 4.61 R
3757 4325 0.411452 TGCTCCCAGGCCCAAAAATA 59.589 50.000 0.00 0.00 0.00 1.40 R
5599 6661 0.109723 TGCTTAAGGCCTTGTTCGGT 59.890 50.000 28.77 1.45 40.92 4.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
126 129 6.675413 ATGTTAGCACTATTTACCGGGATA 57.325 37.500 6.32 0.00 0.00 2.59
136 139 9.774413 CACTATTTACCGGGATAAATTAACTCT 57.226 33.333 13.50 0.00 36.42 3.24
261 264 0.842030 AGCCACCCCTGTCTCATGAA 60.842 55.000 0.00 0.00 0.00 2.57
307 314 0.601057 ACGGGCATTGTGCTAAAACC 59.399 50.000 1.64 0.00 44.28 3.27
436 444 8.254508 GGGATATCATCTACATTTAGACCAGAC 58.745 40.741 4.83 0.00 37.15 3.51
478 486 7.911343 ACAAAAATGTTAAAAATCCAACGTCC 58.089 30.769 0.00 0.00 0.00 4.79
701 709 0.321298 ACCCCAAAATCGGACGTCAG 60.321 55.000 18.91 14.28 0.00 3.51
993 1224 2.284847 CCCAAAGCCCCAAGCCAT 60.285 61.111 0.00 0.00 45.47 4.40
1449 1680 2.545731 GAGGAGCAATCGGAGAAAGAC 58.454 52.381 0.00 0.00 43.58 3.01
1469 1700 4.388499 GGCCGTTGCTTCCTCGGA 62.388 66.667 7.01 0.00 46.05 4.55
1484 1715 2.366570 GGAGGGAGAGGAGCAGGT 59.633 66.667 0.00 0.00 0.00 4.00
1701 1932 4.602340 AGAACCGATCAGTGTGTTACTT 57.398 40.909 0.00 0.00 37.60 2.24
1734 1965 7.566760 TGAAACTGATCAATGTGTTACTGTT 57.433 32.000 0.00 0.00 0.00 3.16
1791 2022 3.476552 TCTTGTTCGCCTGTTCTTGAAT 58.523 40.909 0.00 0.00 0.00 2.57
1942 2173 6.460103 AAGTGATCCTGCAATATATTCCCT 57.540 37.500 0.00 0.00 0.00 4.20
1943 2174 6.059787 AGTGATCCTGCAATATATTCCCTC 57.940 41.667 0.00 0.00 0.00 4.30
1946 2177 3.248024 TCCTGCAATATATTCCCTCCGT 58.752 45.455 0.00 0.00 0.00 4.69
1947 2178 3.650942 TCCTGCAATATATTCCCTCCGTT 59.349 43.478 0.00 0.00 0.00 4.44
1948 2179 4.003648 CCTGCAATATATTCCCTCCGTTC 58.996 47.826 0.00 0.00 0.00 3.95
1949 2180 4.003648 CTGCAATATATTCCCTCCGTTCC 58.996 47.826 0.00 0.00 0.00 3.62
1952 2183 5.308497 TGCAATATATTCCCTCCGTTCCTAA 59.692 40.000 0.00 0.00 0.00 2.69
1954 2185 6.884836 GCAATATATTCCCTCCGTTCCTAAAT 59.115 38.462 0.00 0.00 0.00 1.40
1955 2186 8.044908 GCAATATATTCCCTCCGTTCCTAAATA 58.955 37.037 0.00 0.00 0.00 1.40
1959 2190 8.863872 ATATTCCCTCCGTTCCTAAATATTTG 57.136 34.615 11.05 1.40 0.00 2.32
1960 2191 5.703730 TCCCTCCGTTCCTAAATATTTGT 57.296 39.130 11.05 0.00 0.00 2.83
1961 2192 6.069705 TCCCTCCGTTCCTAAATATTTGTT 57.930 37.500 11.05 0.00 0.00 2.83
1962 2193 6.486941 TCCCTCCGTTCCTAAATATTTGTTT 58.513 36.000 11.05 0.00 0.00 2.83
1964 2195 7.452189 TCCCTCCGTTCCTAAATATTTGTTTTT 59.548 33.333 11.05 0.00 0.00 1.94
2000 2231 3.900971 TGGACTACCACATACGGATGTA 58.099 45.455 14.23 0.00 44.82 2.29
2001 2232 4.476297 TGGACTACCACATACGGATGTAT 58.524 43.478 14.23 7.46 44.82 2.29
2002 2233 5.633117 TGGACTACCACATACGGATGTATA 58.367 41.667 14.23 8.27 44.82 1.47
2003 2234 5.708697 TGGACTACCACATACGGATGTATAG 59.291 44.000 21.61 21.61 44.82 1.31
2004 2235 5.942236 GGACTACCACATACGGATGTATAGA 59.058 44.000 26.74 9.83 44.82 1.98
2008 2239 8.105197 ACTACCACATACGGATGTATAGACATA 58.895 37.037 26.74 8.88 46.64 2.29
2009 2240 7.956328 ACCACATACGGATGTATAGACATAT 57.044 36.000 14.23 0.00 46.64 1.78
2010 2241 8.362464 ACCACATACGGATGTATAGACATATT 57.638 34.615 14.23 0.00 46.64 1.28
2011 2242 8.812972 ACCACATACGGATGTATAGACATATTT 58.187 33.333 14.23 0.00 46.64 1.40
2041 2272 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
2042 2273 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2045 2276 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
2046 2277 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
2047 2278 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
2048 2279 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
2050 2281 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
2051 2282 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
2052 2283 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
2053 2284 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
2055 2286 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
2056 2287 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
2057 2288 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
2058 2289 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
2059 2290 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
2060 2291 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
2061 2292 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
2062 2293 6.588756 TCCGTATGTAGTCACTTGTTGAAATC 59.411 38.462 0.00 0.00 35.39 2.17
2063 2294 6.590292 CCGTATGTAGTCACTTGTTGAAATCT 59.410 38.462 0.00 0.00 35.39 2.40
2064 2295 7.201444 CCGTATGTAGTCACTTGTTGAAATCTC 60.201 40.741 0.00 0.00 35.39 2.75
2065 2296 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
2066 2297 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
2067 2298 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
2069 2300 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
2070 2301 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
2071 2302 8.600449 AGTCACTTGTTGAAATCTCTAGAAAG 57.400 34.615 0.00 0.00 35.39 2.62
2072 2303 8.424918 AGTCACTTGTTGAAATCTCTAGAAAGA 58.575 33.333 0.00 0.00 35.39 2.52
2074 2305 8.204160 TCACTTGTTGAAATCTCTAGAAAGACA 58.796 33.333 0.00 0.00 0.00 3.41
2075 2306 8.830580 CACTTGTTGAAATCTCTAGAAAGACAA 58.169 33.333 0.00 0.00 0.00 3.18
2076 2307 9.396022 ACTTGTTGAAATCTCTAGAAAGACAAA 57.604 29.630 0.00 0.00 0.00 2.83
2094 2325 7.465900 AGACAAATATTTAGGAATGGAGGGA 57.534 36.000 0.00 0.00 0.00 4.20
2245 2478 5.002464 AGCATTTGTGATCAAACATAGCC 57.998 39.130 0.00 0.00 44.69 3.93
2326 2559 6.707440 AGTCATTCACTCTATCTACCTGTG 57.293 41.667 0.00 0.00 0.00 3.66
2327 2560 5.596361 AGTCATTCACTCTATCTACCTGTGG 59.404 44.000 0.00 0.00 0.00 4.17
2345 2578 4.673968 TGTGGAACAGTCTAGGAGTATGT 58.326 43.478 0.00 0.00 45.67 2.29
2350 2583 8.258708 GTGGAACAGTCTAGGAGTATGTTAATT 58.741 37.037 0.00 0.00 41.80 1.40
2423 2772 5.813672 GACATTGTCAATTGGCATTAAGCAT 59.186 36.000 14.57 0.00 37.47 3.79
2475 2824 4.003648 AGATTCAGCCAAAGTTCGTAAGG 58.996 43.478 0.00 0.00 38.47 2.69
2493 2842 6.624204 TCGTAAGGTGTACATCACTACATGTG 60.624 42.308 9.11 0.93 45.50 3.21
2512 2861 6.149474 ACATGTGTGTAGTGGCTATCTTTTTC 59.851 38.462 0.00 0.00 36.63 2.29
2514 2863 5.001232 GTGTGTAGTGGCTATCTTTTTCCA 58.999 41.667 0.00 0.00 0.00 3.53
2519 2868 6.823689 TGTAGTGGCTATCTTTTTCCATTCTC 59.176 38.462 0.00 0.00 0.00 2.87
2525 2874 6.238869 GGCTATCTTTTTCCATTCTCCATGTC 60.239 42.308 0.00 0.00 0.00 3.06
2532 2881 5.497464 TTCCATTCTCCATGTCAACTACA 57.503 39.130 0.00 0.00 43.86 2.74
2535 2884 7.194112 TCCATTCTCCATGTCAACTACAATA 57.806 36.000 0.00 0.00 42.70 1.90
2536 2885 7.629157 TCCATTCTCCATGTCAACTACAATAA 58.371 34.615 0.00 0.00 42.70 1.40
2559 2908 7.588497 AAGTGATTTACTTCTCCTTTTTGCT 57.412 32.000 0.00 0.00 46.55 3.91
2573 2922 5.757808 TCCTTTTTGCTTCCTACAAATTTGC 59.242 36.000 18.12 2.83 36.91 3.68
2589 2938 6.127814 ACAAATTTGCAGTCACATAGATCAGG 60.128 38.462 18.12 0.00 0.00 3.86
2592 2941 2.208431 GCAGTCACATAGATCAGGTGC 58.792 52.381 0.00 0.00 38.83 5.01
2602 2951 1.912043 AGATCAGGTGCTATATGGCCC 59.088 52.381 8.76 9.25 0.00 5.80
2824 3173 3.459598 ACCCAGGTATGCTATCATGTGTT 59.540 43.478 0.00 0.00 34.22 3.32
2859 3208 6.827727 AGTACAGTATCTTTTGTGTCACCTT 58.172 36.000 0.00 0.00 0.00 3.50
2959 3308 8.947115 GGTAAAGTAAATTCTGCTGAACTGTAT 58.053 33.333 8.32 0.00 34.71 2.29
3030 3379 5.006746 GCTGTGTTGTTCTAATAATCCTCGG 59.993 44.000 0.00 0.00 0.00 4.63
3034 3383 8.262227 TGTGTTGTTCTAATAATCCTCGGTATT 58.738 33.333 0.00 0.00 0.00 1.89
3035 3384 8.548721 GTGTTGTTCTAATAATCCTCGGTATTG 58.451 37.037 0.00 0.00 0.00 1.90
3037 3386 7.062749 TGTTCTAATAATCCTCGGTATTGCT 57.937 36.000 0.00 0.00 0.00 3.91
3046 3395 5.416271 TCCTCGGTATTGCTAATTATCCC 57.584 43.478 0.00 0.00 0.00 3.85
3073 3422 3.441222 TGCTGAAATTCCAGTGCAGTATG 59.559 43.478 0.00 0.00 36.57 2.39
3080 3429 1.694150 TCCAGTGCAGTATGGGCTATC 59.306 52.381 11.56 0.00 37.19 2.08
3116 3465 9.778741 AAATGTATGTATTAGTATGGTGTGGAG 57.221 33.333 0.00 0.00 0.00 3.86
3145 3494 2.318908 ACTTTTGATGGGCAGCTCAAA 58.681 42.857 0.00 1.10 39.06 2.69
3209 3558 3.603532 ACTGTTGATGTGCCATAGTCAG 58.396 45.455 0.00 0.00 0.00 3.51
3263 3612 8.369218 ACAATTGTAATTTCCTTTTGCTTGAG 57.631 30.769 9.97 0.00 0.00 3.02
3296 3645 2.300152 CCCTCTGACAAGTCACTAAGCA 59.700 50.000 0.00 0.00 35.46 3.91
3344 3693 7.807687 AAGTATAAACTAGTAGCACAACACG 57.192 36.000 0.00 0.00 33.75 4.49
3345 3694 6.917533 AGTATAAACTAGTAGCACAACACGT 58.082 36.000 0.00 0.00 32.84 4.49
3347 3696 4.789095 AAACTAGTAGCACAACACGTTG 57.211 40.909 8.35 8.35 45.58 4.10
3351 3700 5.159209 ACTAGTAGCACAACACGTTGATAC 58.841 41.667 16.48 14.02 42.93 2.24
3354 3787 3.878086 AGCACAACACGTTGATACTTG 57.122 42.857 16.48 5.20 42.93 3.16
3401 3834 4.085733 TGATCCCAGGGTTTGTTAATGTG 58.914 43.478 5.01 0.00 0.00 3.21
3403 3836 3.761897 TCCCAGGGTTTGTTAATGTGAG 58.238 45.455 5.01 0.00 0.00 3.51
3432 3985 5.627499 TGTAACAGTTTGATGAAGGATGC 57.373 39.130 0.00 0.00 0.00 3.91
3465 4018 3.764885 AACAGTTCTGAGTTGTTGTGC 57.235 42.857 6.83 0.00 34.04 4.57
3475 4028 7.228314 TCTGAGTTGTTGTGCTTATAGTACT 57.772 36.000 0.00 0.00 31.77 2.73
3476 4029 8.344446 TCTGAGTTGTTGTGCTTATAGTACTA 57.656 34.615 4.77 4.77 31.77 1.82
3477 4030 8.799367 TCTGAGTTGTTGTGCTTATAGTACTAA 58.201 33.333 6.70 0.00 31.77 2.24
3478 4031 9.587772 CTGAGTTGTTGTGCTTATAGTACTAAT 57.412 33.333 6.70 0.00 31.77 1.73
3479 4032 9.938280 TGAGTTGTTGTGCTTATAGTACTAATT 57.062 29.630 6.70 0.00 31.77 1.40
3574 4127 3.482923 GCATGCTTGACAATTTTCATGCG 60.483 43.478 20.87 12.54 45.30 4.73
3579 4132 4.661402 GCTTGACAATTTTCATGCGAAACG 60.661 41.667 14.42 0.00 40.84 3.60
3604 4157 0.593128 GCAGTGCTTCGTTGGTGAAT 59.407 50.000 8.18 0.00 0.00 2.57
3609 4162 4.675114 CAGTGCTTCGTTGGTGAATAAAAC 59.325 41.667 0.00 0.00 0.00 2.43
3616 4180 7.582319 GCTTCGTTGGTGAATAAAACAAATTTG 59.418 33.333 16.67 16.67 32.27 2.32
3663 4231 1.307097 TTTTGCACAGGCCAAAATGC 58.693 45.000 5.01 9.66 40.13 3.56
3669 4237 2.547642 GCACAGGCCAAAATGCTTAACA 60.548 45.455 5.01 0.00 35.16 2.41
3692 4260 3.557228 TTTGCCTCAAAATTTGCAGGT 57.443 38.095 18.47 0.00 34.81 4.00
3694 4262 4.679373 TTGCCTCAAAATTTGCAGGTAA 57.321 36.364 16.79 16.79 34.81 2.85
3695 4263 3.988819 TGCCTCAAAATTTGCAGGTAAC 58.011 40.909 18.47 8.52 33.36 2.50
3698 4266 4.996758 GCCTCAAAATTTGCAGGTAACATT 59.003 37.500 18.47 0.00 41.41 2.71
3704 4272 3.634568 TTTGCAGGTAACATTTGGACG 57.365 42.857 0.00 0.00 41.41 4.79
3711 4279 4.992319 CAGGTAACATTTGGACGTGACTAA 59.008 41.667 0.00 0.00 41.41 2.24
3715 4283 5.668558 AACATTTGGACGTGACTAAGAAC 57.331 39.130 0.00 0.00 0.00 3.01
3724 4292 6.932400 TGGACGTGACTAAGAACACATAAAAT 59.068 34.615 0.00 0.00 36.91 1.82
3725 4293 7.442969 TGGACGTGACTAAGAACACATAAAATT 59.557 33.333 0.00 0.00 36.91 1.82
3802 4372 3.019564 CTCTGGGAGCCGAATTGAATTT 58.980 45.455 0.00 0.00 0.00 1.82
3804 4374 2.099405 TGGGAGCCGAATTGAATTTCC 58.901 47.619 0.00 0.00 0.00 3.13
3805 4375 1.065551 GGGAGCCGAATTGAATTTCCG 59.934 52.381 0.00 0.00 0.00 4.30
3806 4376 1.533965 GGAGCCGAATTGAATTTCCGC 60.534 52.381 0.00 0.00 32.29 5.54
3807 4377 1.401905 GAGCCGAATTGAATTTCCGCT 59.598 47.619 6.93 6.93 41.02 5.52
3808 4378 2.612212 GAGCCGAATTGAATTTCCGCTA 59.388 45.455 7.13 0.00 39.30 4.26
3809 4379 3.013921 AGCCGAATTGAATTTCCGCTAA 58.986 40.909 5.79 0.00 38.06 3.09
3810 4380 3.632145 AGCCGAATTGAATTTCCGCTAAT 59.368 39.130 5.79 0.00 38.06 1.73
3911 4481 4.138290 TGCGTGGATTTTTCTTCTGGTTA 58.862 39.130 0.00 0.00 0.00 2.85
4001 4578 6.867816 TGCAATGTTCACATTTCCATCTAAAC 59.132 34.615 2.25 0.00 43.48 2.01
4008 4585 6.074648 TCACATTTCCATCTAAACCCAAAGT 58.925 36.000 0.00 0.00 0.00 2.66
4009 4586 6.208599 TCACATTTCCATCTAAACCCAAAGTC 59.791 38.462 0.00 0.00 0.00 3.01
4012 4589 2.990284 TCCATCTAAACCCAAAGTCCCA 59.010 45.455 0.00 0.00 0.00 4.37
4019 4596 0.639943 ACCCAAAGTCCCAAACCCTT 59.360 50.000 0.00 0.00 0.00 3.95
4035 4612 7.119387 CCAAACCCTTAAATCTTCTAGGTCAT 58.881 38.462 0.00 0.00 0.00 3.06
4043 4620 9.770097 CTTAAATCTTCTAGGTCATCTGCAATA 57.230 33.333 0.00 0.00 0.00 1.90
4049 4626 8.198109 TCTTCTAGGTCATCTGCAATAAACTAC 58.802 37.037 0.00 0.00 0.00 2.73
4091 4795 1.972872 AAGTTTGTCACAGCTGGAGG 58.027 50.000 19.93 7.33 0.00 4.30
4151 4855 7.710907 GTGTCATGGATAGACTATTAGTTTGCA 59.289 37.037 0.00 0.00 36.94 4.08
4713 5418 7.390718 TCATCGCATGCTTCTTCTATACTACTA 59.609 37.037 17.13 0.00 0.00 1.82
4715 5420 5.790988 CGCATGCTTCTTCTATACTACTACG 59.209 44.000 17.13 0.00 0.00 3.51
4716 5421 5.569823 GCATGCTTCTTCTATACTACTACGC 59.430 44.000 11.37 0.00 0.00 4.42
4730 5785 6.516739 ACTACTACGCATATGCTATCACAT 57.483 37.500 24.56 6.94 39.32 3.21
4731 5786 7.625828 ACTACTACGCATATGCTATCACATA 57.374 36.000 24.56 7.66 39.32 2.29
4732 5787 7.473366 ACTACTACGCATATGCTATCACATAC 58.527 38.462 24.56 0.00 35.42 2.39
4733 5788 6.516739 ACTACGCATATGCTATCACATACT 57.483 37.500 24.56 0.00 35.42 2.12
4734 5789 6.556212 ACTACGCATATGCTATCACATACTC 58.444 40.000 24.56 0.00 35.42 2.59
4735 5790 4.748892 ACGCATATGCTATCACATACTCC 58.251 43.478 24.56 0.00 35.42 3.85
4736 5791 4.464244 ACGCATATGCTATCACATACTCCT 59.536 41.667 24.56 0.00 35.42 3.69
4737 5792 5.047021 ACGCATATGCTATCACATACTCCTT 60.047 40.000 24.56 0.00 35.42 3.36
4738 5793 5.518128 CGCATATGCTATCACATACTCCTTC 59.482 44.000 24.56 0.00 35.42 3.46
4739 5794 6.626844 CGCATATGCTATCACATACTCCTTCT 60.627 42.308 24.56 0.00 35.42 2.85
4740 5795 6.534436 GCATATGCTATCACATACTCCTTCTG 59.466 42.308 20.64 0.00 35.42 3.02
4741 5796 7.609960 CATATGCTATCACATACTCCTTCTGT 58.390 38.462 0.00 0.00 35.42 3.41
4742 5797 8.743714 CATATGCTATCACATACTCCTTCTGTA 58.256 37.037 0.00 0.00 35.42 2.74
4743 5798 7.603180 ATGCTATCACATACTCCTTCTGTAA 57.397 36.000 0.00 0.00 0.00 2.41
4744 5799 7.418337 TGCTATCACATACTCCTTCTGTAAA 57.582 36.000 0.00 0.00 0.00 2.01
4745 5800 7.492524 TGCTATCACATACTCCTTCTGTAAAG 58.507 38.462 0.00 0.00 0.00 1.85
4746 5801 7.342026 TGCTATCACATACTCCTTCTGTAAAGA 59.658 37.037 0.00 0.00 0.00 2.52
4747 5802 8.198109 GCTATCACATACTCCTTCTGTAAAGAA 58.802 37.037 0.00 0.00 0.00 2.52
4757 5812 9.825109 ACTCCTTCTGTAAAGAAATATAAGAGC 57.175 33.333 0.00 0.00 0.00 4.09
4758 5813 9.823647 CTCCTTCTGTAAAGAAATATAAGAGCA 57.176 33.333 0.00 0.00 0.00 4.26
4791 5846 7.393841 ACTACTTTAGTGATCTAAACGCTCT 57.606 36.000 0.00 0.00 40.05 4.09
4792 5847 7.828712 ACTACTTTAGTGATCTAAACGCTCTT 58.171 34.615 0.00 0.00 40.05 2.85
4793 5848 8.954350 ACTACTTTAGTGATCTAAACGCTCTTA 58.046 33.333 0.00 0.00 40.05 2.10
4794 5849 9.953697 CTACTTTAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 40.05 1.73
4806 5861 9.241317 TCTAAACGCTCTTATATTTCTTTACGG 57.759 33.333 0.00 0.00 0.00 4.02
4807 5862 9.241317 CTAAACGCTCTTATATTTCTTTACGGA 57.759 33.333 0.00 0.00 0.00 4.69
4808 5863 7.695869 AACGCTCTTATATTTCTTTACGGAG 57.304 36.000 0.00 0.00 0.00 4.63
4809 5864 6.214399 ACGCTCTTATATTTCTTTACGGAGG 58.786 40.000 0.00 0.00 0.00 4.30
4810 5865 5.634020 CGCTCTTATATTTCTTTACGGAGGG 59.366 44.000 0.00 0.00 0.00 4.30
4811 5866 6.516194 CGCTCTTATATTTCTTTACGGAGGGA 60.516 42.308 0.00 0.00 34.63 4.20
4812 5867 6.869388 GCTCTTATATTTCTTTACGGAGGGAG 59.131 42.308 0.00 0.00 0.00 4.30
4832 5887 2.429610 AGTACGTACCTTGGTAGCATGG 59.570 50.000 21.80 21.70 0.00 3.66
4979 6038 4.227300 ACCCATTGCCTTAGTTCACTCATA 59.773 41.667 0.00 0.00 0.00 2.15
5075 6134 8.757164 TTATATATGGAGTGTGCGAATAAGTG 57.243 34.615 0.00 0.00 0.00 3.16
5098 6157 1.526917 GGCAGTCTGCTTGTGTGGT 60.527 57.895 23.68 0.00 44.28 4.16
5183 6245 6.543465 CCTGTGAAATTGCATACATTCTAGGA 59.457 38.462 0.00 0.00 33.02 2.94
5199 6261 7.233757 ACATTCTAGGATACAACTGGGATCTAC 59.766 40.741 0.00 0.00 41.41 2.59
5200 6262 6.532119 TCTAGGATACAACTGGGATCTACT 57.468 41.667 0.00 0.00 41.41 2.57
5201 6263 6.544650 TCTAGGATACAACTGGGATCTACTC 58.455 44.000 0.00 0.00 41.41 2.59
5202 6264 4.484912 AGGATACAACTGGGATCTACTCC 58.515 47.826 0.00 0.00 41.23 3.85
5212 6274 3.163616 GGATCTACTCCCTCCGATTCT 57.836 52.381 0.00 0.00 38.19 2.40
5213 6275 4.304048 GGATCTACTCCCTCCGATTCTA 57.696 50.000 0.00 0.00 38.19 2.10
5214 6276 4.664392 GGATCTACTCCCTCCGATTCTAA 58.336 47.826 0.00 0.00 38.19 2.10
5215 6277 5.078256 GGATCTACTCCCTCCGATTCTAAA 58.922 45.833 0.00 0.00 38.19 1.85
5216 6278 5.717654 GGATCTACTCCCTCCGATTCTAAAT 59.282 44.000 0.00 0.00 38.19 1.40
5217 6279 6.890814 GGATCTACTCCCTCCGATTCTAAATA 59.109 42.308 0.00 0.00 38.19 1.40
5218 6280 7.562088 GGATCTACTCCCTCCGATTCTAAATAT 59.438 40.741 0.00 0.00 38.19 1.28
5219 6281 9.629878 GATCTACTCCCTCCGATTCTAAATATA 57.370 37.037 0.00 0.00 0.00 0.86
5220 6282 9.992442 ATCTACTCCCTCCGATTCTAAATATAA 57.008 33.333 0.00 0.00 0.00 0.98
5221 6283 9.463902 TCTACTCCCTCCGATTCTAAATATAAG 57.536 37.037 0.00 0.00 0.00 1.73
5222 6284 6.937392 ACTCCCTCCGATTCTAAATATAAGC 58.063 40.000 0.00 0.00 0.00 3.09
5223 6285 6.070710 ACTCCCTCCGATTCTAAATATAAGCC 60.071 42.308 0.00 0.00 0.00 4.35
5224 6286 6.023603 TCCCTCCGATTCTAAATATAAGCCT 58.976 40.000 0.00 0.00 0.00 4.58
5225 6287 6.500751 TCCCTCCGATTCTAAATATAAGCCTT 59.499 38.462 0.00 0.00 0.00 4.35
5226 6288 7.017254 TCCCTCCGATTCTAAATATAAGCCTTT 59.983 37.037 0.00 0.00 0.00 3.11
5227 6289 7.665974 CCCTCCGATTCTAAATATAAGCCTTTT 59.334 37.037 0.00 0.00 0.00 2.27
5228 6290 9.067986 CCTCCGATTCTAAATATAAGCCTTTTT 57.932 33.333 0.00 0.00 0.00 1.94
5244 6306 7.321745 AGCCTTTTTAGAGATTTCAATACGG 57.678 36.000 0.00 0.00 0.00 4.02
5245 6307 7.110155 AGCCTTTTTAGAGATTTCAATACGGA 58.890 34.615 0.00 0.00 0.00 4.69
5246 6308 7.065923 AGCCTTTTTAGAGATTTCAATACGGAC 59.934 37.037 0.00 0.00 0.00 4.79
5247 6309 7.065923 GCCTTTTTAGAGATTTCAATACGGACT 59.934 37.037 0.00 0.00 0.00 3.85
5248 6310 9.595823 CCTTTTTAGAGATTTCAATACGGACTA 57.404 33.333 0.00 0.00 0.00 2.59
5250 6312 9.932207 TTTTTAGAGATTTCAATACGGACTACA 57.068 29.630 0.00 0.00 0.00 2.74
5254 6316 7.361127 AGAGATTTCAATACGGACTACATACG 58.639 38.462 0.00 0.00 0.00 3.06
5255 6317 6.444633 AGATTTCAATACGGACTACATACGG 58.555 40.000 0.00 0.00 0.00 4.02
5256 6318 5.833406 TTTCAATACGGACTACATACGGA 57.167 39.130 0.00 0.00 0.00 4.69
5257 6319 6.395426 TTTCAATACGGACTACATACGGAT 57.605 37.500 0.00 0.00 31.40 4.18
5258 6320 5.366829 TCAATACGGACTACATACGGATG 57.633 43.478 5.94 5.94 39.16 3.51
5260 6322 5.997129 TCAATACGGACTACATACGGATGTA 59.003 40.000 19.32 19.32 44.77 2.29
5261 6323 6.656270 TCAATACGGACTACATACGGATGTAT 59.344 38.462 20.64 11.04 45.42 2.29
5262 6324 7.823799 TCAATACGGACTACATACGGATGTATA 59.176 37.037 20.64 10.32 45.42 1.47
5263 6325 8.618677 CAATACGGACTACATACGGATGTATAT 58.381 37.037 20.64 12.15 45.42 0.86
5264 6326 9.836864 AATACGGACTACATACGGATGTATATA 57.163 33.333 20.64 9.35 45.42 0.86
5300 6362 4.870221 TGATCAGTTGATGCATTTCTCG 57.130 40.909 0.00 0.00 34.37 4.04
5302 6364 5.418676 TGATCAGTTGATGCATTTCTCGTA 58.581 37.500 0.00 0.00 34.37 3.43
5316 6378 6.183360 GCATTTCTCGTATTGAAATTGAGGGA 60.183 38.462 0.00 0.00 40.76 4.20
5333 6395 6.070951 TGAGGGAATTGAATCTCACATTCT 57.929 37.500 0.00 0.00 32.10 2.40
5375 6437 2.190161 GCATCACATGACGTAGCGTTA 58.810 47.619 0.00 0.00 41.37 3.18
5376 6438 2.601314 GCATCACATGACGTAGCGTTAA 59.399 45.455 0.00 0.00 41.37 2.01
5377 6439 3.245284 GCATCACATGACGTAGCGTTAAT 59.755 43.478 0.00 0.00 41.37 1.40
5378 6440 4.260212 GCATCACATGACGTAGCGTTAATT 60.260 41.667 0.00 0.00 41.37 1.40
5425 6487 6.867519 TGTACTCTGAAAATGGATCTGGTA 57.132 37.500 0.00 0.00 0.00 3.25
5467 6529 4.682860 GCAATGTCACTTTCATCTTTGGTG 59.317 41.667 0.00 0.00 0.00 4.17
5489 6551 2.637382 TCATCAGGGCACAACTCTGTTA 59.363 45.455 0.00 0.00 31.64 2.41
5490 6552 2.839486 TCAGGGCACAACTCTGTTAG 57.161 50.000 0.00 0.00 31.64 2.34
5491 6553 1.347707 TCAGGGCACAACTCTGTTAGG 59.652 52.381 0.00 0.00 31.64 2.69
5492 6554 0.693049 AGGGCACAACTCTGTTAGGG 59.307 55.000 0.00 0.00 31.64 3.53
5493 6555 0.960861 GGGCACAACTCTGTTAGGGC 60.961 60.000 0.00 0.00 31.64 5.19
5494 6556 0.036875 GGCACAACTCTGTTAGGGCT 59.963 55.000 0.00 0.00 31.64 5.19
5495 6557 1.545651 GGCACAACTCTGTTAGGGCTT 60.546 52.381 0.00 0.00 31.64 4.35
5496 6558 1.537202 GCACAACTCTGTTAGGGCTTG 59.463 52.381 0.00 0.00 31.64 4.01
5497 6559 2.851195 CACAACTCTGTTAGGGCTTGT 58.149 47.619 0.00 0.00 31.64 3.16
5498 6560 3.214328 CACAACTCTGTTAGGGCTTGTT 58.786 45.455 0.00 0.00 31.64 2.83
5499 6561 3.251004 CACAACTCTGTTAGGGCTTGTTC 59.749 47.826 0.00 0.00 31.64 3.18
5500 6562 2.457366 ACTCTGTTAGGGCTTGTTCG 57.543 50.000 0.00 0.00 0.00 3.95
5501 6563 1.002087 ACTCTGTTAGGGCTTGTTCGG 59.998 52.381 0.00 0.00 0.00 4.30
5502 6564 1.002087 CTCTGTTAGGGCTTGTTCGGT 59.998 52.381 0.00 0.00 0.00 4.69
5503 6565 1.418637 TCTGTTAGGGCTTGTTCGGTT 59.581 47.619 0.00 0.00 0.00 4.44
5504 6566 2.633967 TCTGTTAGGGCTTGTTCGGTTA 59.366 45.455 0.00 0.00 0.00 2.85
5505 6567 3.071312 TCTGTTAGGGCTTGTTCGGTTAA 59.929 43.478 0.00 0.00 0.00 2.01
5506 6568 4.007659 CTGTTAGGGCTTGTTCGGTTAAT 58.992 43.478 0.00 0.00 0.00 1.40
5507 6569 4.004982 TGTTAGGGCTTGTTCGGTTAATC 58.995 43.478 0.00 0.00 0.00 1.75
5508 6570 2.124277 AGGGCTTGTTCGGTTAATCC 57.876 50.000 0.00 0.00 0.00 3.01
5509 6571 1.633945 AGGGCTTGTTCGGTTAATCCT 59.366 47.619 0.00 0.00 0.00 3.24
5510 6572 2.014857 GGGCTTGTTCGGTTAATCCTC 58.985 52.381 0.00 0.00 0.00 3.71
5511 6573 2.014857 GGCTTGTTCGGTTAATCCTCC 58.985 52.381 0.00 0.00 0.00 4.30
5512 6574 2.355818 GGCTTGTTCGGTTAATCCTCCT 60.356 50.000 0.00 0.00 0.00 3.69
5513 6575 2.937149 GCTTGTTCGGTTAATCCTCCTC 59.063 50.000 0.00 0.00 0.00 3.71
5514 6576 3.532542 CTTGTTCGGTTAATCCTCCTCC 58.467 50.000 0.00 0.00 0.00 4.30
5515 6577 1.835531 TGTTCGGTTAATCCTCCTCCC 59.164 52.381 0.00 0.00 0.00 4.30
5516 6578 1.835531 GTTCGGTTAATCCTCCTCCCA 59.164 52.381 0.00 0.00 0.00 4.37
5517 6579 2.237893 GTTCGGTTAATCCTCCTCCCAA 59.762 50.000 0.00 0.00 0.00 4.12
5518 6580 2.116238 TCGGTTAATCCTCCTCCCAAG 58.884 52.381 0.00 0.00 0.00 3.61
5519 6581 2.116238 CGGTTAATCCTCCTCCCAAGA 58.884 52.381 0.00 0.00 0.00 3.02
5520 6582 2.103263 CGGTTAATCCTCCTCCCAAGAG 59.897 54.545 0.00 0.00 40.09 2.85
5530 6592 0.842635 CTCCCAAGAGGATTGGAGGG 59.157 60.000 8.20 0.00 46.33 4.30
5531 6593 0.624500 TCCCAAGAGGATTGGAGGGG 60.625 60.000 8.20 0.00 40.93 4.79
5532 6594 0.921256 CCCAAGAGGATTGGAGGGGT 60.921 60.000 8.20 0.00 42.06 4.95
5533 6595 0.257039 CCAAGAGGATTGGAGGGGTG 59.743 60.000 0.12 0.00 42.06 4.61
5534 6596 0.995024 CAAGAGGATTGGAGGGGTGT 59.005 55.000 0.00 0.00 0.00 4.16
5535 6597 2.196595 CAAGAGGATTGGAGGGGTGTA 58.803 52.381 0.00 0.00 0.00 2.90
5536 6598 2.780010 CAAGAGGATTGGAGGGGTGTAT 59.220 50.000 0.00 0.00 0.00 2.29
5537 6599 3.151542 AGAGGATTGGAGGGGTGTATT 57.848 47.619 0.00 0.00 0.00 1.89
5538 6600 3.474920 AGAGGATTGGAGGGGTGTATTT 58.525 45.455 0.00 0.00 0.00 1.40
5539 6601 3.858638 AGAGGATTGGAGGGGTGTATTTT 59.141 43.478 0.00 0.00 0.00 1.82
5540 6602 5.043762 AGAGGATTGGAGGGGTGTATTTTA 58.956 41.667 0.00 0.00 0.00 1.52
5541 6603 5.494706 AGAGGATTGGAGGGGTGTATTTTAA 59.505 40.000 0.00 0.00 0.00 1.52
5542 6604 5.516044 AGGATTGGAGGGGTGTATTTTAAC 58.484 41.667 0.00 0.00 0.00 2.01
5543 6605 5.255443 AGGATTGGAGGGGTGTATTTTAACT 59.745 40.000 0.00 0.00 0.00 2.24
5544 6606 5.955959 GGATTGGAGGGGTGTATTTTAACTT 59.044 40.000 0.00 0.00 0.00 2.66
5545 6607 7.036425 AGGATTGGAGGGGTGTATTTTAACTTA 60.036 37.037 0.00 0.00 0.00 2.24
5546 6608 7.783119 GGATTGGAGGGGTGTATTTTAACTTAT 59.217 37.037 0.00 0.00 0.00 1.73
5547 6609 9.856162 GATTGGAGGGGTGTATTTTAACTTATA 57.144 33.333 0.00 0.00 0.00 0.98
5549 6611 9.689501 TTGGAGGGGTGTATTTTAACTTATAAG 57.310 33.333 11.05 11.05 0.00 1.73
5550 6612 9.060137 TGGAGGGGTGTATTTTAACTTATAAGA 57.940 33.333 19.38 0.00 0.00 2.10
5551 6613 9.557061 GGAGGGGTGTATTTTAACTTATAAGAG 57.443 37.037 19.38 0.00 0.00 2.85
5552 6614 9.557061 GAGGGGTGTATTTTAACTTATAAGAGG 57.443 37.037 19.38 0.00 0.00 3.69
5553 6615 9.065722 AGGGGTGTATTTTAACTTATAAGAGGT 57.934 33.333 19.38 6.43 0.00 3.85
5554 6616 9.690913 GGGGTGTATTTTAACTTATAAGAGGTT 57.309 33.333 19.38 6.65 0.00 3.50
5564 6626 9.925545 TTAACTTATAAGAGGTTTAAATCCCCC 57.074 33.333 19.38 0.00 0.00 5.40
5565 6627 7.782695 ACTTATAAGAGGTTTAAATCCCCCT 57.217 36.000 19.38 0.00 0.00 4.79
5566 6628 7.813331 ACTTATAAGAGGTTTAAATCCCCCTC 58.187 38.462 19.38 12.53 43.14 4.30
5567 6629 7.407918 ACTTATAAGAGGTTTAAATCCCCCTCA 59.592 37.037 19.38 5.60 44.85 3.86
5568 6630 6.668133 ATAAGAGGTTTAAATCCCCCTCAA 57.332 37.500 19.38 10.74 44.85 3.02
5569 6631 5.348259 AAGAGGTTTAAATCCCCCTCAAA 57.652 39.130 19.38 0.00 44.85 2.69
5570 6632 4.673968 AGAGGTTTAAATCCCCCTCAAAC 58.326 43.478 19.38 0.00 44.85 2.93
5571 6633 3.767673 GAGGTTTAAATCCCCCTCAAACC 59.232 47.826 14.63 6.45 45.48 3.27
5572 6634 2.835764 GGTTTAAATCCCCCTCAAACCC 59.164 50.000 3.66 0.00 41.38 4.11
5573 6635 2.835764 GTTTAAATCCCCCTCAAACCCC 59.164 50.000 0.00 0.00 0.00 4.95
5574 6636 2.084121 TAAATCCCCCTCAAACCCCT 57.916 50.000 0.00 0.00 0.00 4.79
5575 6637 1.176182 AAATCCCCCTCAAACCCCTT 58.824 50.000 0.00 0.00 0.00 3.95
5576 6638 0.710588 AATCCCCCTCAAACCCCTTC 59.289 55.000 0.00 0.00 0.00 3.46
5577 6639 0.479589 ATCCCCCTCAAACCCCTTCA 60.480 55.000 0.00 0.00 0.00 3.02
5578 6640 0.479589 TCCCCCTCAAACCCCTTCAT 60.480 55.000 0.00 0.00 0.00 2.57
5579 6641 0.413434 CCCCCTCAAACCCCTTCATT 59.587 55.000 0.00 0.00 0.00 2.57
5580 6642 1.619704 CCCCCTCAAACCCCTTCATTC 60.620 57.143 0.00 0.00 0.00 2.67
5581 6643 1.619704 CCCCTCAAACCCCTTCATTCC 60.620 57.143 0.00 0.00 0.00 3.01
5582 6644 1.619704 CCCTCAAACCCCTTCATTCCC 60.620 57.143 0.00 0.00 0.00 3.97
5583 6645 1.359130 CCTCAAACCCCTTCATTCCCT 59.641 52.381 0.00 0.00 0.00 4.20
5584 6646 2.225369 CCTCAAACCCCTTCATTCCCTT 60.225 50.000 0.00 0.00 0.00 3.95
5585 6647 3.092301 CTCAAACCCCTTCATTCCCTTC 58.908 50.000 0.00 0.00 0.00 3.46
5586 6648 1.818674 CAAACCCCTTCATTCCCTTCG 59.181 52.381 0.00 0.00 0.00 3.79
5587 6649 0.331616 AACCCCTTCATTCCCTTCGG 59.668 55.000 0.00 0.00 0.00 4.30
5588 6650 0.549169 ACCCCTTCATTCCCTTCGGA 60.549 55.000 0.00 0.00 35.88 4.55
5589 6651 0.846693 CCCCTTCATTCCCTTCGGAT 59.153 55.000 0.00 0.00 38.24 4.18
5590 6652 1.202818 CCCCTTCATTCCCTTCGGATC 60.203 57.143 0.00 0.00 38.24 3.36
5591 6653 1.202818 CCCTTCATTCCCTTCGGATCC 60.203 57.143 0.00 0.00 38.24 3.36
5592 6654 1.490490 CCTTCATTCCCTTCGGATCCA 59.510 52.381 13.41 0.00 38.24 3.41
5593 6655 2.565841 CTTCATTCCCTTCGGATCCAC 58.434 52.381 13.41 0.00 38.24 4.02
5594 6656 1.578897 TCATTCCCTTCGGATCCACA 58.421 50.000 13.41 0.00 38.24 4.17
5595 6657 1.209504 TCATTCCCTTCGGATCCACAC 59.790 52.381 13.41 0.00 38.24 3.82
5596 6658 0.178068 ATTCCCTTCGGATCCACACG 59.822 55.000 13.41 0.00 38.24 4.49
5597 6659 2.511600 CCCTTCGGATCCACACGC 60.512 66.667 13.41 0.00 0.00 5.34
5598 6660 2.264480 CCTTCGGATCCACACGCA 59.736 61.111 13.41 0.00 0.00 5.24
5599 6661 1.375396 CCTTCGGATCCACACGCAA 60.375 57.895 13.41 0.00 0.00 4.85
5600 6662 1.635663 CCTTCGGATCCACACGCAAC 61.636 60.000 13.41 0.00 0.00 4.17
5601 6663 1.635663 CTTCGGATCCACACGCAACC 61.636 60.000 13.41 0.00 0.00 3.77
5602 6664 3.487202 CGGATCCACACGCAACCG 61.487 66.667 13.41 0.00 41.14 4.44
5603 6665 2.047655 GGATCCACACGCAACCGA 60.048 61.111 6.95 0.00 38.29 4.69
5604 6666 1.669760 GGATCCACACGCAACCGAA 60.670 57.895 6.95 0.00 38.29 4.30
5605 6667 1.495951 GATCCACACGCAACCGAAC 59.504 57.895 0.00 0.00 38.29 3.95
5606 6668 1.225376 GATCCACACGCAACCGAACA 61.225 55.000 0.00 0.00 38.29 3.18
5607 6669 0.816018 ATCCACACGCAACCGAACAA 60.816 50.000 0.00 0.00 38.29 2.83
5608 6670 1.010125 CCACACGCAACCGAACAAG 60.010 57.895 0.00 0.00 38.29 3.16
5609 6671 1.010125 CACACGCAACCGAACAAGG 60.010 57.895 0.00 0.00 38.29 3.61
5610 6672 2.051345 CACGCAACCGAACAAGGC 60.051 61.111 0.00 0.00 38.29 4.35
5611 6673 3.284449 ACGCAACCGAACAAGGCC 61.284 61.111 0.00 0.00 38.29 5.19
5612 6674 2.978010 CGCAACCGAACAAGGCCT 60.978 61.111 0.00 0.00 36.29 5.19
5613 6675 2.551912 CGCAACCGAACAAGGCCTT 61.552 57.895 13.78 13.78 36.29 4.35
5614 6676 1.231958 CGCAACCGAACAAGGCCTTA 61.232 55.000 20.00 0.00 36.29 2.69
5652 7166 3.561725 GGTGCTAGAGAATTTGATTCCCG 59.438 47.826 0.00 0.00 40.13 5.14
5687 7201 9.914923 GTAAAAACTGATGAAAATTGTTTGTCC 57.085 29.630 0.00 0.00 32.20 4.02
5752 8724 8.842358 ATTTACGAGGAACTTTTCATTAGACA 57.158 30.769 0.00 0.00 41.55 3.41
5757 8731 8.129211 ACGAGGAACTTTTCATTAGACAAAAAG 58.871 33.333 0.00 5.52 41.55 2.27
5780 8754 1.070134 GGGGCTTATGTACAGCGATGA 59.930 52.381 8.12 0.00 38.24 2.92
5783 8757 3.194861 GGCTTATGTACAGCGATGACAA 58.805 45.455 8.12 0.00 38.24 3.18
5868 8843 1.903404 CCCTCGTTGGCTTGGCTTT 60.903 57.895 0.00 0.00 0.00 3.51
5872 8847 2.356194 GTTGGCTTGGCTTTGGCG 60.356 61.111 0.00 0.00 39.81 5.69
5873 8848 2.837291 TTGGCTTGGCTTTGGCGT 60.837 55.556 0.00 0.00 39.81 5.68
5898 8873 3.599343 CATAAGCCAGTCACACTGCTTA 58.401 45.455 16.15 16.15 44.63 3.09
5899 8874 2.638480 AAGCCAGTCACACTGCTTAA 57.362 45.000 9.96 0.00 44.63 1.85
5900 8875 2.867109 AGCCAGTCACACTGCTTAAT 57.133 45.000 0.00 0.00 44.63 1.40
5901 8876 2.430465 AGCCAGTCACACTGCTTAATG 58.570 47.619 0.00 0.00 44.63 1.90
5902 8877 2.154462 GCCAGTCACACTGCTTAATGT 58.846 47.619 0.00 0.00 44.63 2.71
5903 8878 2.160417 GCCAGTCACACTGCTTAATGTC 59.840 50.000 0.00 0.00 44.63 3.06
5904 8879 2.744202 CCAGTCACACTGCTTAATGTCC 59.256 50.000 0.00 0.00 44.63 4.02
5905 8880 3.557898 CCAGTCACACTGCTTAATGTCCT 60.558 47.826 0.00 0.00 44.63 3.85
5906 8881 3.681897 CAGTCACACTGCTTAATGTCCTC 59.318 47.826 0.00 0.00 39.62 3.71
5907 8882 2.668457 GTCACACTGCTTAATGTCCTCG 59.332 50.000 0.00 0.00 0.00 4.63
5913 8888 2.352960 CTGCTTAATGTCCTCGAAAGCC 59.647 50.000 11.96 0.00 41.41 4.35
5932 8907 0.033228 CAATGCCGGGCACTTGAAAA 59.967 50.000 26.48 0.00 43.04 2.29
5953 8928 4.011046 GCCATAAAAATGCGGCGG 57.989 55.556 9.78 0.00 34.26 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.312564 AGTAAGTGGACCAATCTAGAGTAAAAC 58.687 37.037 0.00 0.00 0.00 2.43
154 157 6.370166 GCTAGTGTTCTTCAAGACATTAGCTT 59.630 38.462 22.80 0.00 37.86 3.74
307 314 0.531657 TCCCATTTTGCGGCATTCTG 59.468 50.000 2.28 1.29 0.00 3.02
353 360 8.373981 GGGGAGAACTTTATATTACTAAGGGAC 58.626 40.741 0.00 0.00 0.00 4.46
478 486 5.260140 TCGGAATTTTAGCGCTAAAAATCG 58.740 37.500 42.44 38.83 44.92 3.34
636 644 1.999735 TCGGATTCTGATCAAACGCAC 59.000 47.619 0.00 0.00 33.77 5.34
693 701 8.937634 TTACTAAAAAGGATTATCTGACGTCC 57.062 34.615 14.12 0.00 0.00 4.79
864 876 3.612423 TGCGATTCGTCTTTCTGTACATG 59.388 43.478 8.03 0.00 0.00 3.21
866 878 3.291809 TGCGATTCGTCTTTCTGTACA 57.708 42.857 8.03 0.00 0.00 2.90
867 879 3.857665 TGATGCGATTCGTCTTTCTGTAC 59.142 43.478 8.03 0.00 0.00 2.90
937 1167 3.047877 GGTTGTGTCGCCTTCCCG 61.048 66.667 0.00 0.00 0.00 5.14
938 1168 3.047877 CGGTTGTGTCGCCTTCCC 61.048 66.667 0.00 0.00 0.00 3.97
1469 1700 2.040278 CCACCTGCTCCTCTCCCT 59.960 66.667 0.00 0.00 0.00 4.20
1484 1715 1.591703 GGCACATCTGAGTCGACCA 59.408 57.895 13.01 9.18 0.00 4.02
1701 1932 7.830697 ACACATTGATCAGTTTCATTATCCAGA 59.169 33.333 0.00 0.00 0.00 3.86
1734 1965 5.711506 ACACATTGATCAGTTTTAGCATCCA 59.288 36.000 0.00 0.00 0.00 3.41
1938 2169 5.703730 ACAAATATTTAGGAACGGAGGGA 57.296 39.130 0.00 0.00 0.00 4.20
1939 2170 6.769134 AAACAAATATTTAGGAACGGAGGG 57.231 37.500 0.00 0.00 0.00 4.30
1962 2193 9.581289 TGGTAGTCCATTTGAAATCTCTAAAAA 57.419 29.630 0.00 0.00 39.03 1.94
1964 2195 8.160765 TGTGGTAGTCCATTTGAAATCTCTAAA 58.839 33.333 0.00 0.00 46.20 1.85
1966 2197 7.252612 TGTGGTAGTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
1967 2198 6.126863 TGTGGTAGTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
1968 2199 7.254455 CGTATGTGGTAGTCCATTTGAAATCTC 60.254 40.741 0.00 0.00 46.20 2.75
1970 2201 6.238374 CCGTATGTGGTAGTCCATTTGAAATC 60.238 42.308 0.00 0.00 46.20 2.17
1972 2203 4.938832 CCGTATGTGGTAGTCCATTTGAAA 59.061 41.667 0.00 0.00 46.20 2.69
1973 2204 4.223255 TCCGTATGTGGTAGTCCATTTGAA 59.777 41.667 0.00 0.00 46.20 2.69
1974 2205 3.770388 TCCGTATGTGGTAGTCCATTTGA 59.230 43.478 0.00 0.00 46.20 2.69
1975 2206 4.131649 TCCGTATGTGGTAGTCCATTTG 57.868 45.455 0.00 0.00 46.20 2.32
1977 2208 3.709653 ACATCCGTATGTGGTAGTCCATT 59.290 43.478 0.00 0.00 44.79 3.16
1978 2209 3.305720 ACATCCGTATGTGGTAGTCCAT 58.694 45.455 0.00 0.00 44.79 3.41
1979 2210 2.742348 ACATCCGTATGTGGTAGTCCA 58.258 47.619 0.00 0.00 44.79 4.02
1980 2211 5.942236 TCTATACATCCGTATGTGGTAGTCC 59.058 44.000 3.56 0.00 45.99 3.85
1982 2213 6.301486 TGTCTATACATCCGTATGTGGTAGT 58.699 40.000 3.56 0.00 45.99 2.73
1983 2214 6.812879 TGTCTATACATCCGTATGTGGTAG 57.187 41.667 3.56 6.48 45.99 3.18
1984 2215 9.470399 AATATGTCTATACATCCGTATGTGGTA 57.530 33.333 3.56 0.00 45.99 3.25
1985 2216 7.956328 ATATGTCTATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
2016 2247 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
2017 2248 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
2018 2249 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
2023 2254 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
2024 2255 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2026 2257 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2028 2259 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
2029 2260 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
2030 2261 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
2031 2262 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
2033 2264 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
2034 2265 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
2037 2268 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
2042 2273 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
2045 2276 9.698309 CTTTCTAGAGATTTCAACAAGTGACTA 57.302 33.333 0.00 0.00 35.39 2.59
2046 2277 8.424918 TCTTTCTAGAGATTTCAACAAGTGACT 58.575 33.333 0.00 0.00 35.39 3.41
2047 2278 8.491950 GTCTTTCTAGAGATTTCAACAAGTGAC 58.508 37.037 0.00 0.00 35.39 3.67
2048 2279 8.204160 TGTCTTTCTAGAGATTTCAACAAGTGA 58.796 33.333 0.00 0.00 0.00 3.41
2050 2281 8.964476 TTGTCTTTCTAGAGATTTCAACAAGT 57.036 30.769 0.00 0.00 0.00 3.16
2066 2297 9.413734 CCTCCATTCCTAAATATTTGTCTTTCT 57.586 33.333 11.05 0.00 0.00 2.52
2067 2298 8.633561 CCCTCCATTCCTAAATATTTGTCTTTC 58.366 37.037 11.05 0.00 0.00 2.62
2069 2300 7.882755 TCCCTCCATTCCTAAATATTTGTCTT 58.117 34.615 11.05 0.00 0.00 3.01
2070 2301 7.129504 ACTCCCTCCATTCCTAAATATTTGTCT 59.870 37.037 11.05 0.00 0.00 3.41
2071 2302 7.290813 ACTCCCTCCATTCCTAAATATTTGTC 58.709 38.462 11.05 0.00 0.00 3.18
2072 2303 7.226059 ACTCCCTCCATTCCTAAATATTTGT 57.774 36.000 11.05 0.00 0.00 2.83
2074 2305 8.960064 ACATACTCCCTCCATTCCTAAATATTT 58.040 33.333 5.89 5.89 0.00 1.40
2075 2306 8.525729 ACATACTCCCTCCATTCCTAAATATT 57.474 34.615 0.00 0.00 0.00 1.28
2076 2307 8.525729 AACATACTCCCTCCATTCCTAAATAT 57.474 34.615 0.00 0.00 0.00 1.28
2077 2308 7.947782 AACATACTCCCTCCATTCCTAAATA 57.052 36.000 0.00 0.00 0.00 1.40
2078 2309 6.848562 AACATACTCCCTCCATTCCTAAAT 57.151 37.500 0.00 0.00 0.00 1.40
2080 2311 6.652205 AAAACATACTCCCTCCATTCCTAA 57.348 37.500 0.00 0.00 0.00 2.69
2081 2312 7.136885 TCTAAAACATACTCCCTCCATTCCTA 58.863 38.462 0.00 0.00 0.00 2.94
2082 2313 5.970640 TCTAAAACATACTCCCTCCATTCCT 59.029 40.000 0.00 0.00 0.00 3.36
2083 2314 6.248569 TCTAAAACATACTCCCTCCATTCC 57.751 41.667 0.00 0.00 0.00 3.01
2084 2315 8.575649 TTTTCTAAAACATACTCCCTCCATTC 57.424 34.615 0.00 0.00 0.00 2.67
2245 2478 5.545063 AACAAAAATGACAAAGTAGGGGG 57.455 39.130 0.00 0.00 0.00 5.40
2282 2515 7.262048 TGACTATTGCGTTATATCAAGTGACA 58.738 34.615 0.00 0.00 0.00 3.58
2392 2625 6.587206 TGCCAATTGACAATGTCTCAATTA 57.413 33.333 14.97 0.00 43.45 1.40
2405 2638 5.839621 AGATGATGCTTAATGCCAATTGAC 58.160 37.500 7.12 0.00 42.00 3.18
2407 2640 7.599171 TCATAGATGATGCTTAATGCCAATTG 58.401 34.615 0.00 0.00 42.00 2.32
2445 2794 7.040409 ACGAACTTTGGCTGAATCTTTCTAATT 60.040 33.333 0.00 0.00 0.00 1.40
2493 2842 6.599638 AGAATGGAAAAAGATAGCCACTACAC 59.400 38.462 0.00 0.00 32.42 2.90
2504 2853 6.723052 AGTTGACATGGAGAATGGAAAAAGAT 59.277 34.615 0.00 0.00 40.94 2.40
2512 2861 7.554118 ACTTATTGTAGTTGACATGGAGAATGG 59.446 37.037 0.00 0.00 40.94 3.16
2514 2863 8.321353 TCACTTATTGTAGTTGACATGGAGAAT 58.679 33.333 0.00 0.00 38.07 2.40
2519 2868 9.988350 GTAAATCACTTATTGTAGTTGACATGG 57.012 33.333 0.00 0.00 38.07 3.66
2536 2885 7.255625 GGAAGCAAAAAGGAGAAGTAAATCACT 60.256 37.037 0.00 0.00 40.05 3.41
2555 2904 4.340666 TGACTGCAAATTTGTAGGAAGCAA 59.659 37.500 31.34 13.26 43.92 3.91
2556 2905 3.888323 TGACTGCAAATTTGTAGGAAGCA 59.112 39.130 31.34 22.23 43.92 3.91
2559 2908 6.939730 TCTATGTGACTGCAAATTTGTAGGAA 59.060 34.615 31.34 20.09 43.92 3.36
2573 2922 3.815856 AGCACCTGATCTATGTGACTG 57.184 47.619 12.14 0.00 31.66 3.51
2589 2938 0.405585 ATGTGGGGGCCATATAGCAC 59.594 55.000 4.39 0.00 33.62 4.40
2592 2941 4.526970 GTTGATATGTGGGGGCCATATAG 58.473 47.826 4.39 0.00 40.08 1.31
2602 2951 1.542547 GGCCTACGGTTGATATGTGGG 60.543 57.143 0.00 0.00 37.32 4.61
2824 3173 9.256477 CAAAAGATACTGTACTTGTCAGTGTAA 57.744 33.333 8.54 0.00 44.41 2.41
2931 3280 6.206634 CAGTTCAGCAGAATTTACTTTACCCA 59.793 38.462 0.00 0.00 35.92 4.51
2975 3324 4.508124 CGTCAAGCTCAGTACAGAAAAGTT 59.492 41.667 0.00 0.00 0.00 2.66
2978 3327 4.049186 GTCGTCAAGCTCAGTACAGAAAA 58.951 43.478 0.00 0.00 0.00 2.29
3021 3370 7.562135 GGGATAATTAGCAATACCGAGGATTA 58.438 38.462 2.72 0.00 0.00 1.75
3030 3379 6.090898 CAGCACTACGGGATAATTAGCAATAC 59.909 42.308 2.72 0.00 0.00 1.89
3034 3383 3.639561 TCAGCACTACGGGATAATTAGCA 59.360 43.478 2.72 0.00 0.00 3.49
3035 3384 4.252971 TCAGCACTACGGGATAATTAGC 57.747 45.455 0.00 0.00 0.00 3.09
3037 3386 6.708949 GGAATTTCAGCACTACGGGATAATTA 59.291 38.462 0.00 0.00 0.00 1.40
3046 3395 2.159653 GCACTGGAATTTCAGCACTACG 60.160 50.000 14.03 0.00 38.26 3.51
3073 3422 7.394359 ACATACATTTACAATGATGGATAGCCC 59.606 37.037 3.47 0.00 0.00 5.19
3109 3458 7.707035 CCATCAAAAGTATAGAGTACTCCACAC 59.293 40.741 19.38 13.56 0.00 3.82
3116 3465 5.467063 GCTGCCCATCAAAAGTATAGAGTAC 59.533 44.000 0.00 0.00 0.00 2.73
3179 3528 6.048732 TGGCACATCAACAGTCTTAGAATA 57.951 37.500 0.00 0.00 0.00 1.75
3237 3586 9.474920 CTCAAGCAAAAGGAAATTACAATTGTA 57.525 29.630 14.35 14.35 0.00 2.41
3263 3612 2.070028 GTCAGAGGGAACGAAAGCTTC 58.930 52.381 0.00 0.00 0.00 3.86
3296 3645 3.073062 AGTTCACTGCAATACCAAGGACT 59.927 43.478 0.00 0.00 0.00 3.85
3335 3684 2.307049 GCAAGTATCAACGTGTTGTGC 58.693 47.619 12.10 10.27 41.16 4.57
3337 3686 1.877443 GGGCAAGTATCAACGTGTTGT 59.123 47.619 12.10 3.48 41.16 3.32
3339 3688 1.530323 GGGGCAAGTATCAACGTGTT 58.470 50.000 0.00 0.00 37.41 3.32
3340 3689 0.322187 GGGGGCAAGTATCAACGTGT 60.322 55.000 0.00 0.00 37.41 4.49
3341 3690 0.035439 AGGGGGCAAGTATCAACGTG 60.035 55.000 0.00 0.00 38.04 4.49
3342 3691 0.252197 GAGGGGGCAAGTATCAACGT 59.748 55.000 0.00 0.00 0.00 3.99
3344 3693 0.539986 TCGAGGGGGCAAGTATCAAC 59.460 55.000 0.00 0.00 0.00 3.18
3345 3694 0.830648 CTCGAGGGGGCAAGTATCAA 59.169 55.000 3.91 0.00 0.00 2.57
3347 3696 1.120530 TTCTCGAGGGGGCAAGTATC 58.879 55.000 13.56 0.00 0.00 2.24
3351 3700 2.938956 AATATTCTCGAGGGGGCAAG 57.061 50.000 13.56 0.00 0.00 4.01
3354 3787 4.618920 TTTCTAATATTCTCGAGGGGGC 57.381 45.455 13.56 0.00 0.00 5.80
3383 3816 2.231235 GCTCACATTAACAAACCCTGGG 59.769 50.000 12.28 12.28 0.00 4.45
3401 3834 7.421530 TCATCAAACTGTTACAAAGTAGCTC 57.578 36.000 0.00 0.00 0.00 4.09
3403 3836 7.041372 TCCTTCATCAAACTGTTACAAAGTAGC 60.041 37.037 0.00 0.00 0.00 3.58
3574 4127 2.558313 GCACTGCTGCTCCGTTTC 59.442 61.111 0.00 0.00 40.63 2.78
3586 4139 4.481930 TTTATTCACCAACGAAGCACTG 57.518 40.909 0.00 0.00 0.00 3.66
3591 4144 8.061268 CCAAATTTGTTTTATTCACCAACGAAG 58.939 33.333 16.73 0.00 29.33 3.79
3595 4148 6.016693 CCCCCAAATTTGTTTTATTCACCAAC 60.017 38.462 16.73 0.00 0.00 3.77
3604 4157 7.502561 CCAAATGTTACCCCCAAATTTGTTTTA 59.497 33.333 16.73 0.51 36.80 1.52
3609 4162 4.759183 CACCAAATGTTACCCCCAAATTTG 59.241 41.667 11.40 11.40 37.76 2.32
3663 4231 7.914346 TGCAAATTTTGAGGCAAAAATGTTAAG 59.086 29.630 13.26 3.28 44.68 1.85
3669 4237 4.888823 ACCTGCAAATTTTGAGGCAAAAAT 59.111 33.333 13.26 5.40 44.68 1.82
3676 4244 6.073112 CCAAATGTTACCTGCAAATTTTGAGG 60.073 38.462 13.26 16.41 35.46 3.86
3679 4247 6.563753 CGTCCAAATGTTACCTGCAAATTTTG 60.564 38.462 4.72 4.72 0.00 2.44
3681 4249 4.987912 CGTCCAAATGTTACCTGCAAATTT 59.012 37.500 0.00 0.00 0.00 1.82
3682 4250 4.038642 ACGTCCAAATGTTACCTGCAAATT 59.961 37.500 0.00 0.00 0.00 1.82
3683 4251 3.572255 ACGTCCAAATGTTACCTGCAAAT 59.428 39.130 0.00 0.00 0.00 2.32
3692 4260 6.201425 GTGTTCTTAGTCACGTCCAAATGTTA 59.799 38.462 0.00 0.00 0.00 2.41
3694 4262 4.510340 GTGTTCTTAGTCACGTCCAAATGT 59.490 41.667 0.00 0.00 0.00 2.71
3695 4263 4.509970 TGTGTTCTTAGTCACGTCCAAATG 59.490 41.667 0.00 0.00 37.38 2.32
3698 4266 3.804786 TGTGTTCTTAGTCACGTCCAA 57.195 42.857 0.00 0.00 37.38 3.53
3757 4325 0.411452 TGCTCCCAGGCCCAAAAATA 59.589 50.000 0.00 0.00 0.00 1.40
3784 4353 2.099405 GGAAATTCAATTCGGCTCCCA 58.901 47.619 0.00 0.00 0.00 4.37
3785 4354 1.065551 CGGAAATTCAATTCGGCTCCC 59.934 52.381 0.00 0.00 0.00 4.30
3792 4362 8.911247 AGTGTTAATTAGCGGAAATTCAATTC 57.089 30.769 0.00 0.00 31.63 2.17
3798 4368 6.370718 ACGAAGAGTGTTAATTAGCGGAAATT 59.629 34.615 0.00 1.35 33.69 1.82
3802 4372 4.445452 ACGAAGAGTGTTAATTAGCGGA 57.555 40.909 0.00 0.00 0.00 5.54
3842 4412 4.509915 AGTGTTTGTAACTTGTTCGACG 57.490 40.909 0.00 0.00 0.00 5.12
4001 4578 2.687003 TAAGGGTTTGGGACTTTGGG 57.313 50.000 0.00 0.00 0.00 4.12
4008 4585 5.554350 ACCTAGAAGATTTAAGGGTTTGGGA 59.446 40.000 0.00 0.00 33.16 4.37
4009 4586 5.827756 ACCTAGAAGATTTAAGGGTTTGGG 58.172 41.667 0.00 0.00 33.16 4.12
4012 4589 8.049721 CAGATGACCTAGAAGATTTAAGGGTTT 58.950 37.037 0.00 0.00 33.16 3.27
4116 4820 5.304101 AGTCTATCCATGACACATCTCCTTC 59.696 44.000 0.00 0.00 36.94 3.46
4688 5393 6.385843 AGTAGTATAGAAGAAGCATGCGATG 58.614 40.000 13.01 0.00 0.00 3.84
4715 5420 6.534436 CAGAAGGAGTATGTGATAGCATATGC 59.466 42.308 20.36 20.36 42.49 3.14
4716 5421 7.609960 ACAGAAGGAGTATGTGATAGCATATG 58.390 38.462 0.00 0.00 34.35 1.78
4731 5786 9.825109 GCTCTTATATTTCTTTACAGAAGGAGT 57.175 33.333 0.00 0.00 40.28 3.85
4732 5787 9.823647 TGCTCTTATATTTCTTTACAGAAGGAG 57.176 33.333 0.00 0.00 40.28 3.69
4767 5822 7.393841 AGAGCGTTTAGATCACTAAAGTAGT 57.606 36.000 0.00 0.00 45.42 2.73
4768 5823 9.953697 ATAAGAGCGTTTAGATCACTAAAGTAG 57.046 33.333 0.00 0.00 45.42 2.57
4780 5835 9.241317 CCGTAAAGAAATATAAGAGCGTTTAGA 57.759 33.333 0.00 0.00 0.00 2.10
4781 5836 9.241317 TCCGTAAAGAAATATAAGAGCGTTTAG 57.759 33.333 0.00 0.00 0.00 1.85
4782 5837 9.241317 CTCCGTAAAGAAATATAAGAGCGTTTA 57.759 33.333 0.00 0.00 0.00 2.01
4783 5838 7.224167 CCTCCGTAAAGAAATATAAGAGCGTTT 59.776 37.037 0.00 0.00 0.00 3.60
4784 5839 6.700520 CCTCCGTAAAGAAATATAAGAGCGTT 59.299 38.462 0.00 0.00 0.00 4.84
4785 5840 6.214399 CCTCCGTAAAGAAATATAAGAGCGT 58.786 40.000 0.00 0.00 0.00 5.07
4786 5841 5.634020 CCCTCCGTAAAGAAATATAAGAGCG 59.366 44.000 0.00 0.00 0.00 5.03
4787 5842 6.756221 TCCCTCCGTAAAGAAATATAAGAGC 58.244 40.000 0.00 0.00 0.00 4.09
4788 5843 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
4789 5844 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
4790 5845 7.806960 CGTACTCCCTCCGTAAAGAAATATAAG 59.193 40.741 0.00 0.00 0.00 1.73
4791 5846 7.285401 ACGTACTCCCTCCGTAAAGAAATATAA 59.715 37.037 0.00 0.00 32.22 0.98
4792 5847 6.772716 ACGTACTCCCTCCGTAAAGAAATATA 59.227 38.462 0.00 0.00 32.22 0.86
4793 5848 5.595952 ACGTACTCCCTCCGTAAAGAAATAT 59.404 40.000 0.00 0.00 32.22 1.28
4794 5849 4.949856 ACGTACTCCCTCCGTAAAGAAATA 59.050 41.667 0.00 0.00 32.22 1.40
4795 5850 3.766051 ACGTACTCCCTCCGTAAAGAAAT 59.234 43.478 0.00 0.00 32.22 2.17
4796 5851 3.157087 ACGTACTCCCTCCGTAAAGAAA 58.843 45.455 0.00 0.00 32.22 2.52
4797 5852 2.795329 ACGTACTCCCTCCGTAAAGAA 58.205 47.619 0.00 0.00 32.22 2.52
4798 5853 2.496899 ACGTACTCCCTCCGTAAAGA 57.503 50.000 0.00 0.00 32.22 2.52
4799 5854 2.356069 GGTACGTACTCCCTCCGTAAAG 59.644 54.545 24.07 0.00 38.62 1.85
4800 5855 2.026262 AGGTACGTACTCCCTCCGTAAA 60.026 50.000 24.07 0.00 38.62 2.01
4801 5856 1.559682 AGGTACGTACTCCCTCCGTAA 59.440 52.381 24.07 0.00 38.62 3.18
4802 5857 1.204146 AGGTACGTACTCCCTCCGTA 58.796 55.000 24.07 0.00 36.12 4.02
4803 5858 0.329596 AAGGTACGTACTCCCTCCGT 59.670 55.000 24.07 3.09 38.53 4.69
4804 5859 0.737219 CAAGGTACGTACTCCCTCCG 59.263 60.000 24.07 5.83 0.00 4.63
4805 5860 1.109609 CCAAGGTACGTACTCCCTCC 58.890 60.000 24.07 7.57 0.00 4.30
4806 5861 1.844687 ACCAAGGTACGTACTCCCTC 58.155 55.000 24.07 8.13 0.00 4.30
4807 5862 2.947695 GCTACCAAGGTACGTACTCCCT 60.948 54.545 24.07 11.30 0.00 4.20
4808 5863 1.406898 GCTACCAAGGTACGTACTCCC 59.593 57.143 24.07 9.06 0.00 4.30
4809 5864 2.094675 TGCTACCAAGGTACGTACTCC 58.905 52.381 24.07 9.81 0.00 3.85
4810 5865 3.490419 CCATGCTACCAAGGTACGTACTC 60.490 52.174 24.07 14.56 0.00 2.59
4811 5866 2.429610 CCATGCTACCAAGGTACGTACT 59.570 50.000 24.07 7.61 0.00 2.73
4812 5867 2.428171 TCCATGCTACCAAGGTACGTAC 59.572 50.000 17.56 17.56 31.81 3.67
5075 6134 3.060615 CAAGCAGACTGCCCCAGC 61.061 66.667 23.74 0.00 46.52 4.85
5199 6261 6.155393 AGGCTTATATTTAGAATCGGAGGGAG 59.845 42.308 0.00 0.00 0.00 4.30
5200 6262 6.023603 AGGCTTATATTTAGAATCGGAGGGA 58.976 40.000 0.00 0.00 0.00 4.20
5201 6263 6.301169 AGGCTTATATTTAGAATCGGAGGG 57.699 41.667 0.00 0.00 0.00 4.30
5202 6264 8.622948 AAAAGGCTTATATTTAGAATCGGAGG 57.377 34.615 0.00 0.00 0.00 4.30
5218 6280 8.889717 CCGTATTGAAATCTCTAAAAAGGCTTA 58.110 33.333 0.00 0.00 0.00 3.09
5219 6281 7.610305 TCCGTATTGAAATCTCTAAAAAGGCTT 59.390 33.333 0.00 0.00 0.00 4.35
5220 6282 7.065923 GTCCGTATTGAAATCTCTAAAAAGGCT 59.934 37.037 0.00 0.00 0.00 4.58
5221 6283 7.065923 AGTCCGTATTGAAATCTCTAAAAAGGC 59.934 37.037 0.00 0.00 0.00 4.35
5222 6284 8.494016 AGTCCGTATTGAAATCTCTAAAAAGG 57.506 34.615 0.00 0.00 0.00 3.11
5224 6286 9.932207 TGTAGTCCGTATTGAAATCTCTAAAAA 57.068 29.630 0.00 0.00 0.00 1.94
5228 6290 8.501580 CGTATGTAGTCCGTATTGAAATCTCTA 58.498 37.037 0.00 0.00 0.00 2.43
5229 6291 7.361127 CGTATGTAGTCCGTATTGAAATCTCT 58.639 38.462 0.00 0.00 0.00 3.10
5230 6292 6.581542 CCGTATGTAGTCCGTATTGAAATCTC 59.418 42.308 0.00 0.00 0.00 2.75
5231 6293 6.263842 TCCGTATGTAGTCCGTATTGAAATCT 59.736 38.462 0.00 0.00 0.00 2.40
5232 6294 6.441274 TCCGTATGTAGTCCGTATTGAAATC 58.559 40.000 0.00 0.00 0.00 2.17
5233 6295 6.395426 TCCGTATGTAGTCCGTATTGAAAT 57.605 37.500 0.00 0.00 0.00 2.17
5234 6296 5.833406 TCCGTATGTAGTCCGTATTGAAA 57.167 39.130 0.00 0.00 0.00 2.69
5235 6297 5.300034 ACATCCGTATGTAGTCCGTATTGAA 59.700 40.000 0.00 0.00 44.66 2.69
5236 6298 4.823442 ACATCCGTATGTAGTCCGTATTGA 59.177 41.667 0.00 0.00 44.66 2.57
5237 6299 5.117355 ACATCCGTATGTAGTCCGTATTG 57.883 43.478 0.00 0.00 44.66 1.90
5249 6311 9.186323 GCAGCTAGAATTATATACATCCGTATG 57.814 37.037 0.00 0.00 38.79 2.39
5250 6312 9.137459 AGCAGCTAGAATTATATACATCCGTAT 57.863 33.333 0.00 0.00 41.34 3.06
5251 6313 8.521170 AGCAGCTAGAATTATATACATCCGTA 57.479 34.615 0.00 0.00 0.00 4.02
5252 6314 7.411486 AGCAGCTAGAATTATATACATCCGT 57.589 36.000 0.00 0.00 0.00 4.69
5253 6315 9.973450 AATAGCAGCTAGAATTATATACATCCG 57.027 33.333 8.43 0.00 0.00 4.18
5262 6324 9.217278 CAACTGATCAATAGCAGCTAGAATTAT 57.783 33.333 8.43 0.00 43.10 1.28
5263 6325 8.424133 TCAACTGATCAATAGCAGCTAGAATTA 58.576 33.333 8.43 0.00 43.10 1.40
5264 6326 7.278135 TCAACTGATCAATAGCAGCTAGAATT 58.722 34.615 8.43 0.00 43.10 2.17
5300 6362 9.741647 GAGATTCAATTCCCTCAATTTCAATAC 57.258 33.333 0.00 0.00 31.79 1.89
5302 6364 8.255905 GTGAGATTCAATTCCCTCAATTTCAAT 58.744 33.333 0.00 0.00 37.40 2.57
5333 6395 5.733226 CATTGTGATGCGGACATAAAGTA 57.267 39.130 0.00 0.00 36.35 2.24
5420 6482 1.560923 GTGCAGCACGACTATACCAG 58.439 55.000 10.47 0.00 0.00 4.00
5425 6487 0.391661 CAAGGGTGCAGCACGACTAT 60.392 55.000 19.42 8.18 34.83 2.12
5449 6511 5.239306 TGATGACACCAAAGATGAAAGTGAC 59.761 40.000 0.00 0.00 32.76 3.67
5467 6529 1.271054 ACAGAGTTGTGCCCTGATGAC 60.271 52.381 0.00 0.00 35.83 3.06
5489 6551 1.633945 AGGATTAACCGAACAAGCCCT 59.366 47.619 0.00 0.00 44.74 5.19
5490 6552 2.014857 GAGGATTAACCGAACAAGCCC 58.985 52.381 0.00 0.00 44.74 5.19
5491 6553 2.014857 GGAGGATTAACCGAACAAGCC 58.985 52.381 0.00 0.00 44.74 4.35
5492 6554 2.937149 GAGGAGGATTAACCGAACAAGC 59.063 50.000 0.00 0.00 44.74 4.01
5493 6555 3.532542 GGAGGAGGATTAACCGAACAAG 58.467 50.000 0.00 0.00 44.74 3.16
5494 6556 2.237893 GGGAGGAGGATTAACCGAACAA 59.762 50.000 0.00 0.00 44.74 2.83
5495 6557 1.835531 GGGAGGAGGATTAACCGAACA 59.164 52.381 0.00 0.00 44.74 3.18
5496 6558 1.835531 TGGGAGGAGGATTAACCGAAC 59.164 52.381 0.00 0.00 44.74 3.95
5497 6559 2.257391 TGGGAGGAGGATTAACCGAA 57.743 50.000 0.00 0.00 44.74 4.30
5498 6560 2.116238 CTTGGGAGGAGGATTAACCGA 58.884 52.381 0.00 0.00 44.74 4.69
5499 6561 2.103263 CTCTTGGGAGGAGGATTAACCG 59.897 54.545 0.00 0.00 38.58 4.44
5500 6562 3.847671 CTCTTGGGAGGAGGATTAACC 57.152 52.381 0.00 0.00 36.03 2.85
5513 6575 0.921256 ACCCCTCCAATCCTCTTGGG 60.921 60.000 4.28 0.00 39.96 4.12
5514 6576 0.257039 CACCCCTCCAATCCTCTTGG 59.743 60.000 0.00 0.00 40.87 3.61
5515 6577 0.995024 ACACCCCTCCAATCCTCTTG 59.005 55.000 0.00 0.00 0.00 3.02
5516 6578 2.661176 TACACCCCTCCAATCCTCTT 57.339 50.000 0.00 0.00 0.00 2.85
5517 6579 2.897823 ATACACCCCTCCAATCCTCT 57.102 50.000 0.00 0.00 0.00 3.69
5518 6580 3.953542 AAATACACCCCTCCAATCCTC 57.046 47.619 0.00 0.00 0.00 3.71
5519 6581 5.255443 AGTTAAAATACACCCCTCCAATCCT 59.745 40.000 0.00 0.00 0.00 3.24
5520 6582 5.516044 AGTTAAAATACACCCCTCCAATCC 58.484 41.667 0.00 0.00 0.00 3.01
5521 6583 8.762481 ATAAGTTAAAATACACCCCTCCAATC 57.238 34.615 0.00 0.00 0.00 2.67
5523 6585 9.689501 CTTATAAGTTAAAATACACCCCTCCAA 57.310 33.333 4.18 0.00 0.00 3.53
5524 6586 9.060137 TCTTATAAGTTAAAATACACCCCTCCA 57.940 33.333 12.19 0.00 0.00 3.86
5525 6587 9.557061 CTCTTATAAGTTAAAATACACCCCTCC 57.443 37.037 12.19 0.00 0.00 4.30
5526 6588 9.557061 CCTCTTATAAGTTAAAATACACCCCTC 57.443 37.037 12.19 0.00 0.00 4.30
5527 6589 9.065722 ACCTCTTATAAGTTAAAATACACCCCT 57.934 33.333 12.19 0.00 0.00 4.79
5528 6590 9.690913 AACCTCTTATAAGTTAAAATACACCCC 57.309 33.333 12.19 0.00 0.00 4.95
5538 6600 9.925545 GGGGGATTTAAACCTCTTATAAGTTAA 57.074 33.333 12.19 7.05 0.00 2.01
5539 6601 9.300187 AGGGGGATTTAAACCTCTTATAAGTTA 57.700 33.333 12.19 1.35 32.28 2.24
5540 6602 8.183571 AGGGGGATTTAAACCTCTTATAAGTT 57.816 34.615 12.19 2.27 32.28 2.66
5541 6603 7.782695 AGGGGGATTTAAACCTCTTATAAGT 57.217 36.000 12.19 0.00 32.28 2.24
5549 6611 5.359484 GGGTTTGAGGGGGATTTAAACCTC 61.359 50.000 13.24 13.24 45.86 3.85
5550 6612 3.503412 GGGTTTGAGGGGGATTTAAACCT 60.503 47.826 14.54 0.00 45.86 3.50
5551 6613 2.835764 GGGTTTGAGGGGGATTTAAACC 59.164 50.000 0.00 0.00 45.86 3.27
5552 6614 2.835764 GGGGTTTGAGGGGGATTTAAAC 59.164 50.000 0.00 0.00 0.00 2.01
5553 6615 2.730816 AGGGGTTTGAGGGGGATTTAAA 59.269 45.455 0.00 0.00 0.00 1.52
5554 6616 2.374179 AGGGGTTTGAGGGGGATTTAA 58.626 47.619 0.00 0.00 0.00 1.52
5555 6617 2.084121 AGGGGTTTGAGGGGGATTTA 57.916 50.000 0.00 0.00 0.00 1.40
5556 6618 1.078823 GAAGGGGTTTGAGGGGGATTT 59.921 52.381 0.00 0.00 0.00 2.17
5557 6619 0.710588 GAAGGGGTTTGAGGGGGATT 59.289 55.000 0.00 0.00 0.00 3.01
5558 6620 0.479589 TGAAGGGGTTTGAGGGGGAT 60.480 55.000 0.00 0.00 0.00 3.85
5559 6621 0.479589 ATGAAGGGGTTTGAGGGGGA 60.480 55.000 0.00 0.00 0.00 4.81
5560 6622 0.413434 AATGAAGGGGTTTGAGGGGG 59.587 55.000 0.00 0.00 0.00 5.40
5561 6623 1.619704 GGAATGAAGGGGTTTGAGGGG 60.620 57.143 0.00 0.00 0.00 4.79
5562 6624 1.619704 GGGAATGAAGGGGTTTGAGGG 60.620 57.143 0.00 0.00 0.00 4.30
5563 6625 1.359130 AGGGAATGAAGGGGTTTGAGG 59.641 52.381 0.00 0.00 0.00 3.86
5564 6626 2.907458 AGGGAATGAAGGGGTTTGAG 57.093 50.000 0.00 0.00 0.00 3.02
5565 6627 2.554344 CGAAGGGAATGAAGGGGTTTGA 60.554 50.000 0.00 0.00 0.00 2.69
5566 6628 1.818674 CGAAGGGAATGAAGGGGTTTG 59.181 52.381 0.00 0.00 0.00 2.93
5567 6629 2.215942 CGAAGGGAATGAAGGGGTTT 57.784 50.000 0.00 0.00 0.00 3.27
5568 6630 3.978876 CGAAGGGAATGAAGGGGTT 57.021 52.632 0.00 0.00 0.00 4.11
5582 6644 1.635663 GGTTGCGTGTGGATCCGAAG 61.636 60.000 7.39 0.00 0.00 3.79
5583 6645 1.669760 GGTTGCGTGTGGATCCGAA 60.670 57.895 7.39 0.00 0.00 4.30
5584 6646 2.047655 GGTTGCGTGTGGATCCGA 60.048 61.111 7.39 0.00 0.00 4.55
5585 6647 3.487202 CGGTTGCGTGTGGATCCG 61.487 66.667 7.39 0.00 41.41 4.18
5586 6648 1.669760 TTCGGTTGCGTGTGGATCC 60.670 57.895 4.20 4.20 0.00 3.36
5587 6649 1.225376 TGTTCGGTTGCGTGTGGATC 61.225 55.000 0.00 0.00 0.00 3.36
5588 6650 0.816018 TTGTTCGGTTGCGTGTGGAT 60.816 50.000 0.00 0.00 0.00 3.41
5589 6651 1.433053 CTTGTTCGGTTGCGTGTGGA 61.433 55.000 0.00 0.00 0.00 4.02
5590 6652 1.010125 CTTGTTCGGTTGCGTGTGG 60.010 57.895 0.00 0.00 0.00 4.17
5591 6653 1.010125 CCTTGTTCGGTTGCGTGTG 60.010 57.895 0.00 0.00 0.00 3.82
5592 6654 2.830285 GCCTTGTTCGGTTGCGTGT 61.830 57.895 0.00 0.00 0.00 4.49
5593 6655 2.051345 GCCTTGTTCGGTTGCGTG 60.051 61.111 0.00 0.00 0.00 5.34
5594 6656 3.284449 GGCCTTGTTCGGTTGCGT 61.284 61.111 0.00 0.00 0.00 5.24
5595 6657 1.231958 TAAGGCCTTGTTCGGTTGCG 61.232 55.000 28.77 0.00 0.00 4.85
5596 6658 0.955905 TTAAGGCCTTGTTCGGTTGC 59.044 50.000 28.77 0.00 0.00 4.17
5597 6659 1.068541 GCTTAAGGCCTTGTTCGGTTG 60.069 52.381 28.77 9.39 34.27 3.77
5598 6660 1.244816 GCTTAAGGCCTTGTTCGGTT 58.755 50.000 28.77 0.57 34.27 4.44
5599 6661 0.109723 TGCTTAAGGCCTTGTTCGGT 59.890 50.000 28.77 1.45 40.92 4.69
5600 6662 1.463674 ATGCTTAAGGCCTTGTTCGG 58.536 50.000 28.77 13.32 40.92 4.30
5601 6663 3.191371 AGAAATGCTTAAGGCCTTGTTCG 59.809 43.478 28.77 13.64 40.92 3.95
5602 6664 4.790765 AGAAATGCTTAAGGCCTTGTTC 57.209 40.909 28.77 18.53 40.92 3.18
5603 6665 4.886579 CAAGAAATGCTTAAGGCCTTGTT 58.113 39.130 28.77 11.53 40.92 2.83
5604 6666 4.525912 CAAGAAATGCTTAAGGCCTTGT 57.474 40.909 28.77 4.97 40.92 3.16
5652 7166 8.856490 TTTTCATCAGTTTTTACTTCTGCTTC 57.144 30.769 0.00 0.00 0.00 3.86
5687 7201 6.031751 ACTCTAGCTCCAAACTACAAAGAG 57.968 41.667 0.00 0.00 0.00 2.85
5727 8699 8.842358 TGTCTAATGAAAAGTTCCTCGTAAAT 57.158 30.769 0.00 0.00 0.00 1.40
5751 8723 5.622233 GCTGTACATAAGCCCCTTCTTTTTG 60.622 44.000 0.00 0.00 34.45 2.44
5752 8724 4.462834 GCTGTACATAAGCCCCTTCTTTTT 59.537 41.667 0.00 0.00 34.45 1.94
5757 8731 1.138266 TCGCTGTACATAAGCCCCTTC 59.862 52.381 0.00 0.00 37.37 3.46
5760 8734 1.070134 TCATCGCTGTACATAAGCCCC 59.930 52.381 0.00 0.00 37.37 5.80
5780 8754 6.099557 TCCATGAGTTCCCTTCAAAAATTTGT 59.900 34.615 5.84 0.00 39.18 2.83
5783 8757 6.745794 TTCCATGAGTTCCCTTCAAAAATT 57.254 33.333 0.00 0.00 0.00 1.82
5898 8873 1.474077 GCATTGGCTTTCGAGGACATT 59.526 47.619 0.00 0.00 36.96 2.71
5899 8874 1.098050 GCATTGGCTTTCGAGGACAT 58.902 50.000 0.00 0.00 36.96 3.06
5900 8875 0.960364 GGCATTGGCTTTCGAGGACA 60.960 55.000 2.42 0.00 40.87 4.02
5901 8876 1.803289 GGCATTGGCTTTCGAGGAC 59.197 57.895 2.42 0.00 40.87 3.85
5902 8877 1.745115 CGGCATTGGCTTTCGAGGA 60.745 57.895 8.71 0.00 40.87 3.71
5903 8878 2.764314 CCGGCATTGGCTTTCGAGG 61.764 63.158 8.71 0.00 40.87 4.63
5904 8879 2.764314 CCCGGCATTGGCTTTCGAG 61.764 63.158 8.71 0.00 40.87 4.04
5905 8880 2.749839 CCCGGCATTGGCTTTCGA 60.750 61.111 8.71 0.00 40.87 3.71
5906 8881 4.496927 GCCCGGCATTGGCTTTCG 62.497 66.667 3.91 0.00 45.70 3.46
5913 8888 0.033228 TTTTCAAGTGCCCGGCATTG 59.967 50.000 16.96 19.04 41.91 2.82
5932 8907 0.175531 GCCGCATTTTTATGGCACCT 59.824 50.000 0.00 0.00 46.76 4.00
5936 8911 0.869880 GACCGCCGCATTTTTATGGC 60.870 55.000 0.00 0.00 44.09 4.40
5938 8913 2.559998 AAGACCGCCGCATTTTTATG 57.440 45.000 0.00 0.00 0.00 1.90
5939 8914 3.942748 TCTAAAGACCGCCGCATTTTTAT 59.057 39.130 0.00 0.00 0.00 1.40
5940 8915 3.336468 TCTAAAGACCGCCGCATTTTTA 58.664 40.909 0.00 0.00 0.00 1.52
5945 8920 0.753262 AGATCTAAAGACCGCCGCAT 59.247 50.000 0.00 0.00 0.00 4.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.