Multiple sequence alignment - TraesCS2D01G379800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G379800 chr2D 100.000 1778 0 0 865 2642 484357813 484359590 0.000000e+00 3284.0
1 TraesCS2D01G379800 chr2D 100.000 465 0 0 1 465 484356949 484357413 0.000000e+00 859.0
2 TraesCS2D01G379800 chr2D 90.957 376 31 3 26 400 325987065 325986692 1.090000e-138 503.0
3 TraesCS2D01G379800 chr2D 91.033 368 27 3 28 395 223903143 223903504 2.360000e-135 492.0
4 TraesCS2D01G379800 chr2B 95.455 946 32 4 865 1803 569062803 569063744 0.000000e+00 1498.0
5 TraesCS2D01G379800 chr2B 95.935 369 14 1 2090 2458 569140947 569140580 4.870000e-167 597.0
6 TraesCS2D01G379800 chr2A 95.823 838 25 7 876 1713 628638098 628638925 0.000000e+00 1345.0
7 TraesCS2D01G379800 chr2A 92.553 846 40 9 1711 2546 628639028 628639860 0.000000e+00 1192.0
8 TraesCS2D01G379800 chr2A 89.877 405 34 7 1 400 564622724 564622322 5.040000e-142 514.0
9 TraesCS2D01G379800 chr2A 93.069 101 7 0 2541 2641 628663830 628663930 5.890000e-32 148.0
10 TraesCS2D01G379800 chr4D 94.118 357 17 4 26 380 72433058 72432704 8.320000e-150 540.0
11 TraesCS2D01G379800 chr3A 90.576 382 28 7 26 400 439461206 439460826 1.410000e-137 499.0
12 TraesCS2D01G379800 chr6B 90.501 379 30 4 26 403 641524945 641524572 1.830000e-136 496.0
13 TraesCS2D01G379800 chr6B 89.870 385 30 9 26 403 671869235 671868853 1.100000e-133 486.0
14 TraesCS2D01G379800 chr4A 90.691 376 26 7 23 391 611605972 611606345 2.360000e-135 492.0
15 TraesCS2D01G379800 chr7A 90.237 379 29 8 26 400 649609971 649609597 3.060000e-134 488.0
16 TraesCS2D01G379800 chr7A 97.297 37 1 0 403 439 88945474 88945438 2.200000e-06 63.9
17 TraesCS2D01G379800 chrUn 91.667 48 2 2 403 450 301349977 301349932 6.100000e-07 65.8
18 TraesCS2D01G379800 chrUn 91.667 48 2 2 403 450 348118258 348118303 6.100000e-07 65.8
19 TraesCS2D01G379800 chrUn 97.222 36 1 0 403 438 320256146 320256181 7.900000e-06 62.1
20 TraesCS2D01G379800 chrUn 97.222 36 1 0 403 438 357700796 357700831 7.900000e-06 62.1
21 TraesCS2D01G379800 chr3B 93.023 43 1 1 403 445 755174832 755174792 7.900000e-06 62.1
22 TraesCS2D01G379800 chr3B 97.222 36 1 0 403 438 756117540 756117575 7.900000e-06 62.1
23 TraesCS2D01G379800 chr3B 89.362 47 3 2 403 449 610496815 610496771 1.020000e-04 58.4
24 TraesCS2D01G379800 chr7D 87.037 54 5 2 403 455 108173794 108173846 2.840000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G379800 chr2D 484356949 484359590 2641 False 2071.5 3284 100.000 1 2642 2 chr2D.!!$F2 2641
1 TraesCS2D01G379800 chr2B 569062803 569063744 941 False 1498.0 1498 95.455 865 1803 1 chr2B.!!$F1 938
2 TraesCS2D01G379800 chr2A 628638098 628639860 1762 False 1268.5 1345 94.188 876 2546 2 chr2A.!!$F2 1670

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
212 213 0.033504 TCAGGTCCAGTCTTTGCGTC 59.966 55.0 0.0 0.0 0.0 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2044 2159 1.15415 GACAAGCATGCCAGCGAAC 60.154 57.895 15.66 0.0 40.15 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.202623 GGCCACGCTCGTCTACTG 60.203 66.667 0.00 0.00 0.00 2.74
18 19 2.881352 GCCACGCTCGTCTACTGC 60.881 66.667 0.00 0.00 0.00 4.40
23 24 4.059136 GCTCGTCTACTGCGACAC 57.941 61.111 0.00 0.00 34.47 3.67
24 25 1.863880 GCTCGTCTACTGCGACACG 60.864 63.158 0.00 0.00 34.47 4.49
25 26 1.496393 CTCGTCTACTGCGACACGT 59.504 57.895 0.00 0.00 34.47 4.49
26 27 0.518764 CTCGTCTACTGCGACACGTC 60.519 60.000 0.00 0.00 34.47 4.34
27 28 0.947660 TCGTCTACTGCGACACGTCT 60.948 55.000 0.00 0.00 33.54 4.18
28 29 0.518764 CGTCTACTGCGACACGTCTC 60.519 60.000 0.00 0.00 33.54 3.36
29 30 0.179194 GTCTACTGCGACACGTCTCC 60.179 60.000 0.00 0.00 34.11 3.71
30 31 1.226046 CTACTGCGACACGTCTCCG 60.226 63.158 0.00 0.00 40.83 4.63
35 36 3.103911 CGACACGTCTCCGCCAAC 61.104 66.667 0.00 0.00 37.70 3.77
36 37 2.737376 GACACGTCTCCGCCAACC 60.737 66.667 0.00 0.00 37.70 3.77
37 38 4.309950 ACACGTCTCCGCCAACCC 62.310 66.667 0.00 0.00 37.70 4.11
38 39 4.308458 CACGTCTCCGCCAACCCA 62.308 66.667 0.00 0.00 37.70 4.51
39 40 4.003788 ACGTCTCCGCCAACCCAG 62.004 66.667 0.00 0.00 37.70 4.45
40 41 4.003788 CGTCTCCGCCAACCCAGT 62.004 66.667 0.00 0.00 0.00 4.00
41 42 2.047179 GTCTCCGCCAACCCAGTC 60.047 66.667 0.00 0.00 0.00 3.51
42 43 3.319198 TCTCCGCCAACCCAGTCC 61.319 66.667 0.00 0.00 0.00 3.85
43 44 3.636231 CTCCGCCAACCCAGTCCA 61.636 66.667 0.00 0.00 0.00 4.02
44 45 3.901797 CTCCGCCAACCCAGTCCAC 62.902 68.421 0.00 0.00 0.00 4.02
46 47 4.263572 CGCCAACCCAGTCCACCA 62.264 66.667 0.00 0.00 0.00 4.17
47 48 2.440599 GCCAACCCAGTCCACCAT 59.559 61.111 0.00 0.00 0.00 3.55
48 49 1.678970 GCCAACCCAGTCCACCATC 60.679 63.158 0.00 0.00 0.00 3.51
49 50 1.377202 CCAACCCAGTCCACCATCG 60.377 63.158 0.00 0.00 0.00 3.84
50 51 1.374947 CAACCCAGTCCACCATCGT 59.625 57.895 0.00 0.00 0.00 3.73
51 52 0.673644 CAACCCAGTCCACCATCGTC 60.674 60.000 0.00 0.00 0.00 4.20
52 53 2.167398 AACCCAGTCCACCATCGTCG 62.167 60.000 0.00 0.00 0.00 5.12
53 54 2.348104 CCCAGTCCACCATCGTCGA 61.348 63.158 0.00 0.00 0.00 4.20
54 55 1.589630 CCAGTCCACCATCGTCGAA 59.410 57.895 0.00 0.00 0.00 3.71
55 56 0.736325 CCAGTCCACCATCGTCGAAC 60.736 60.000 0.00 0.00 0.00 3.95
56 57 1.071019 CAGTCCACCATCGTCGAACG 61.071 60.000 0.00 0.00 44.19 3.95
66 67 3.258498 CGTCGAACGAAGCACATTG 57.742 52.632 0.00 0.00 46.05 2.82
67 68 0.781787 CGTCGAACGAAGCACATTGA 59.218 50.000 0.00 0.00 46.05 2.57
68 69 1.201704 CGTCGAACGAAGCACATTGAG 60.202 52.381 0.00 0.00 46.05 3.02
69 70 0.790207 TCGAACGAAGCACATTGAGC 59.210 50.000 0.00 0.00 0.00 4.26
70 71 0.792640 CGAACGAAGCACATTGAGCT 59.207 50.000 2.49 2.49 45.97 4.09
71 72 1.201855 CGAACGAAGCACATTGAGCTC 60.202 52.381 6.82 6.82 42.53 4.09
72 73 0.792640 AACGAAGCACATTGAGCTCG 59.207 50.000 9.64 18.42 42.53 5.03
73 74 0.038251 ACGAAGCACATTGAGCTCGA 60.038 50.000 23.20 6.01 42.53 4.04
74 75 0.368227 CGAAGCACATTGAGCTCGAC 59.632 55.000 5.59 4.02 42.53 4.20
75 76 1.432514 GAAGCACATTGAGCTCGACA 58.567 50.000 5.59 0.00 42.53 4.35
76 77 2.005451 GAAGCACATTGAGCTCGACAT 58.995 47.619 5.59 0.00 42.53 3.06
77 78 2.967599 AGCACATTGAGCTCGACATA 57.032 45.000 5.59 0.00 38.01 2.29
78 79 2.544685 AGCACATTGAGCTCGACATAC 58.455 47.619 5.59 0.00 38.01 2.39
79 80 2.094026 AGCACATTGAGCTCGACATACA 60.094 45.455 5.59 0.00 38.01 2.29
80 81 2.029728 GCACATTGAGCTCGACATACAC 59.970 50.000 5.59 0.00 0.00 2.90
81 82 3.515630 CACATTGAGCTCGACATACACT 58.484 45.455 5.59 0.00 0.00 3.55
82 83 3.928992 CACATTGAGCTCGACATACACTT 59.071 43.478 5.59 0.00 0.00 3.16
83 84 4.389992 CACATTGAGCTCGACATACACTTT 59.610 41.667 5.59 0.00 0.00 2.66
84 85 4.389992 ACATTGAGCTCGACATACACTTTG 59.610 41.667 5.59 0.00 0.00 2.77
85 86 3.660501 TGAGCTCGACATACACTTTGT 57.339 42.857 9.64 0.00 0.00 2.83
86 87 3.990092 TGAGCTCGACATACACTTTGTT 58.010 40.909 9.64 0.00 0.00 2.83
87 88 4.377021 TGAGCTCGACATACACTTTGTTT 58.623 39.130 9.64 0.00 0.00 2.83
88 89 4.211164 TGAGCTCGACATACACTTTGTTTG 59.789 41.667 9.64 0.00 35.80 2.93
89 90 4.127171 AGCTCGACATACACTTTGTTTGT 58.873 39.130 2.54 2.54 43.42 2.83
90 91 4.024893 AGCTCGACATACACTTTGTTTGTG 60.025 41.667 7.07 0.00 41.41 3.33
91 92 4.025229 GCTCGACATACACTTTGTTTGTGA 60.025 41.667 7.07 5.12 41.41 3.58
92 93 5.651172 TCGACATACACTTTGTTTGTGAG 57.349 39.130 7.07 2.64 41.41 3.51
93 94 4.025229 TCGACATACACTTTGTTTGTGAGC 60.025 41.667 7.07 0.00 41.41 4.26
94 95 4.260579 CGACATACACTTTGTTTGTGAGCA 60.261 41.667 7.07 0.00 41.41 4.26
95 96 5.173774 ACATACACTTTGTTTGTGAGCAG 57.826 39.130 2.15 0.00 40.20 4.24
96 97 4.036734 ACATACACTTTGTTTGTGAGCAGG 59.963 41.667 2.15 0.00 40.20 4.85
97 98 2.446435 ACACTTTGTTTGTGAGCAGGT 58.554 42.857 0.00 0.00 38.65 4.00
98 99 2.164219 ACACTTTGTTTGTGAGCAGGTG 59.836 45.455 0.00 0.00 38.65 4.00
99 100 1.750778 ACTTTGTTTGTGAGCAGGTGG 59.249 47.619 0.00 0.00 0.00 4.61
100 101 0.459489 TTTGTTTGTGAGCAGGTGGC 59.541 50.000 0.00 0.00 45.30 5.01
114 115 4.802051 TGGCTCTTGGGCGCATCC 62.802 66.667 10.83 1.84 44.11 3.51
124 125 4.467084 GCGCATCCGGGTCCTTCA 62.467 66.667 0.30 0.00 34.32 3.02
125 126 2.511600 CGCATCCGGGTCCTTCAC 60.512 66.667 0.00 0.00 0.00 3.18
126 127 2.511600 GCATCCGGGTCCTTCACG 60.512 66.667 0.00 0.00 43.35 4.35
127 128 2.978824 CATCCGGGTCCTTCACGT 59.021 61.111 0.00 0.00 41.99 4.49
128 129 1.153628 CATCCGGGTCCTTCACGTC 60.154 63.158 0.00 0.00 41.99 4.34
129 130 2.356780 ATCCGGGTCCTTCACGTCC 61.357 63.158 0.00 0.00 41.99 4.79
130 131 4.078516 CCGGGTCCTTCACGTCCC 62.079 72.222 0.00 0.00 41.99 4.46
132 133 2.993264 GGGTCCTTCACGTCCCGA 60.993 66.667 0.00 0.00 0.00 5.14
133 134 2.260743 GGTCCTTCACGTCCCGAC 59.739 66.667 0.00 0.00 0.00 4.79
146 147 4.072088 CCGACGGCGCAACAGTTC 62.072 66.667 4.27 0.00 35.83 3.01
147 148 4.409588 CGACGGCGCAACAGTTCG 62.410 66.667 10.83 2.56 0.00 3.95
152 153 3.788766 GCGCAACAGTTCGCCGAT 61.789 61.111 0.30 0.00 45.01 4.18
153 154 2.096406 CGCAACAGTTCGCCGATG 59.904 61.111 0.00 0.00 0.00 3.84
154 155 2.667318 CGCAACAGTTCGCCGATGT 61.667 57.895 0.00 0.00 0.00 3.06
155 156 1.132640 GCAACAGTTCGCCGATGTC 59.867 57.895 0.00 0.00 0.00 3.06
156 157 1.565156 GCAACAGTTCGCCGATGTCA 61.565 55.000 0.00 0.00 0.00 3.58
157 158 1.078709 CAACAGTTCGCCGATGTCAT 58.921 50.000 0.00 0.00 0.00 3.06
158 159 1.078709 AACAGTTCGCCGATGTCATG 58.921 50.000 0.00 0.00 0.00 3.07
159 160 0.246360 ACAGTTCGCCGATGTCATGA 59.754 50.000 0.00 0.00 0.00 3.07
160 161 0.647410 CAGTTCGCCGATGTCATGAC 59.353 55.000 19.27 19.27 0.00 3.06
161 162 0.802222 AGTTCGCCGATGTCATGACG 60.802 55.000 20.54 9.18 0.00 4.35
162 163 0.800683 GTTCGCCGATGTCATGACGA 60.801 55.000 20.54 10.31 0.00 4.20
163 164 0.109039 TTCGCCGATGTCATGACGAA 60.109 50.000 20.54 15.48 37.21 3.85
164 165 0.525455 TCGCCGATGTCATGACGAAG 60.525 55.000 20.54 13.16 0.00 3.79
165 166 1.482621 CGCCGATGTCATGACGAAGG 61.483 60.000 20.54 21.21 0.00 3.46
166 167 1.154205 GCCGATGTCATGACGAAGGG 61.154 60.000 24.90 20.82 0.00 3.95
167 168 0.459899 CCGATGTCATGACGAAGGGA 59.540 55.000 20.54 2.48 0.00 4.20
168 169 1.560923 CGATGTCATGACGAAGGGAC 58.439 55.000 20.54 6.11 0.00 4.46
170 171 2.544685 GATGTCATGACGAAGGGACTG 58.455 52.381 20.54 0.00 40.86 3.51
171 172 0.037326 TGTCATGACGAAGGGACTGC 60.037 55.000 20.54 0.00 40.86 4.40
172 173 0.741221 GTCATGACGAAGGGACTGCC 60.741 60.000 10.69 0.00 40.86 4.85
173 174 0.904865 TCATGACGAAGGGACTGCCT 60.905 55.000 0.00 0.00 40.86 4.75
174 175 0.824109 CATGACGAAGGGACTGCCTA 59.176 55.000 0.00 0.00 40.86 3.93
175 176 0.824759 ATGACGAAGGGACTGCCTAC 59.175 55.000 0.00 0.00 40.86 3.18
176 177 0.251653 TGACGAAGGGACTGCCTACT 60.252 55.000 0.00 0.00 40.86 2.57
177 178 0.896226 GACGAAGGGACTGCCTACTT 59.104 55.000 0.00 0.00 40.86 2.24
178 179 0.896226 ACGAAGGGACTGCCTACTTC 59.104 55.000 0.00 0.00 40.86 3.01
179 180 0.175989 CGAAGGGACTGCCTACTTCC 59.824 60.000 0.00 0.00 40.86 3.46
180 181 0.175989 GAAGGGACTGCCTACTTCCG 59.824 60.000 0.00 0.00 40.86 4.30
181 182 0.544595 AAGGGACTGCCTACTTCCGT 60.545 55.000 0.00 0.00 40.86 4.69
182 183 0.544595 AGGGACTGCCTACTTCCGTT 60.545 55.000 0.00 0.00 37.18 4.44
183 184 0.323957 GGGACTGCCTACTTCCGTTT 59.676 55.000 0.00 0.00 0.00 3.60
184 185 1.271217 GGGACTGCCTACTTCCGTTTT 60.271 52.381 0.00 0.00 0.00 2.43
185 186 2.074576 GGACTGCCTACTTCCGTTTTC 58.925 52.381 0.00 0.00 0.00 2.29
186 187 1.725164 GACTGCCTACTTCCGTTTTCG 59.275 52.381 0.00 0.00 43.67 3.46
200 201 2.414806 GTTTTCGAGGAGTTCAGGTCC 58.585 52.381 0.00 0.00 0.00 4.46
201 202 1.712056 TTTCGAGGAGTTCAGGTCCA 58.288 50.000 0.00 0.00 36.43 4.02
202 203 1.257743 TTCGAGGAGTTCAGGTCCAG 58.742 55.000 0.00 0.00 36.43 3.86
203 204 0.112606 TCGAGGAGTTCAGGTCCAGT 59.887 55.000 0.00 0.00 36.43 4.00
204 205 0.528470 CGAGGAGTTCAGGTCCAGTC 59.472 60.000 0.00 0.00 36.43 3.51
205 206 1.888826 CGAGGAGTTCAGGTCCAGTCT 60.889 57.143 0.00 0.00 36.43 3.24
206 207 2.252714 GAGGAGTTCAGGTCCAGTCTT 58.747 52.381 0.00 0.00 36.43 3.01
207 208 2.635427 GAGGAGTTCAGGTCCAGTCTTT 59.365 50.000 0.00 0.00 36.43 2.52
208 209 2.370189 AGGAGTTCAGGTCCAGTCTTTG 59.630 50.000 0.00 0.00 36.43 2.77
209 210 2.147150 GAGTTCAGGTCCAGTCTTTGC 58.853 52.381 0.00 0.00 0.00 3.68
210 211 0.868406 GTTCAGGTCCAGTCTTTGCG 59.132 55.000 0.00 0.00 0.00 4.85
211 212 0.468226 TTCAGGTCCAGTCTTTGCGT 59.532 50.000 0.00 0.00 0.00 5.24
212 213 0.033504 TCAGGTCCAGTCTTTGCGTC 59.966 55.000 0.00 0.00 0.00 5.19
213 214 0.034059 CAGGTCCAGTCTTTGCGTCT 59.966 55.000 0.00 0.00 0.00 4.18
214 215 0.318762 AGGTCCAGTCTTTGCGTCTC 59.681 55.000 0.00 0.00 0.00 3.36
215 216 0.670854 GGTCCAGTCTTTGCGTCTCC 60.671 60.000 0.00 0.00 0.00 3.71
216 217 1.009389 GTCCAGTCTTTGCGTCTCCG 61.009 60.000 0.00 0.00 37.07 4.63
217 218 1.738099 CCAGTCTTTGCGTCTCCGG 60.738 63.158 0.00 0.00 33.68 5.14
218 219 2.048127 AGTCTTTGCGTCTCCGGC 60.048 61.111 0.00 0.00 33.68 6.13
219 220 3.479269 GTCTTTGCGTCTCCGGCG 61.479 66.667 0.00 0.00 33.68 6.46
220 221 3.676605 TCTTTGCGTCTCCGGCGA 61.677 61.111 9.30 0.00 33.68 5.54
221 222 3.479269 CTTTGCGTCTCCGGCGAC 61.479 66.667 14.74 14.74 33.68 5.19
265 266 4.929479 GGGGGTGAATATATGGTTATGCA 58.071 43.478 0.00 0.00 0.00 3.96
266 267 5.518865 GGGGGTGAATATATGGTTATGCAT 58.481 41.667 3.79 3.79 0.00 3.96
267 268 5.360714 GGGGGTGAATATATGGTTATGCATG 59.639 44.000 10.16 0.00 0.00 4.06
268 269 5.951747 GGGGTGAATATATGGTTATGCATGT 59.048 40.000 10.16 0.00 0.00 3.21
269 270 7.116075 GGGGTGAATATATGGTTATGCATGTA 58.884 38.462 10.16 0.00 0.00 2.29
270 271 7.779798 GGGGTGAATATATGGTTATGCATGTAT 59.220 37.037 10.16 0.82 0.00 2.29
271 272 9.845740 GGGTGAATATATGGTTATGCATGTATA 57.154 33.333 10.16 0.00 0.00 1.47
287 288 9.618890 ATGCATGTATATTGTATATCTTGGTCC 57.381 33.333 0.00 0.00 0.00 4.46
288 289 8.601546 TGCATGTATATTGTATATCTTGGTCCA 58.398 33.333 0.00 0.00 0.00 4.02
289 290 8.883731 GCATGTATATTGTATATCTTGGTCCAC 58.116 37.037 0.00 0.00 0.00 4.02
290 291 9.383519 CATGTATATTGTATATCTTGGTCCACC 57.616 37.037 0.00 0.00 0.00 4.61
291 292 8.736097 TGTATATTGTATATCTTGGTCCACCT 57.264 34.615 0.00 0.00 36.82 4.00
292 293 8.812972 TGTATATTGTATATCTTGGTCCACCTC 58.187 37.037 0.00 0.00 36.82 3.85
293 294 5.568620 ATTGTATATCTTGGTCCACCTCC 57.431 43.478 0.00 0.00 36.82 4.30
294 295 4.280789 TGTATATCTTGGTCCACCTCCT 57.719 45.455 0.00 0.00 36.82 3.69
295 296 5.412617 TGTATATCTTGGTCCACCTCCTA 57.587 43.478 0.00 0.00 36.82 2.94
296 297 5.394738 TGTATATCTTGGTCCACCTCCTAG 58.605 45.833 0.00 0.00 36.82 3.02
297 298 2.950990 ATCTTGGTCCACCTCCTAGT 57.049 50.000 0.00 0.00 36.82 2.57
298 299 2.233305 TCTTGGTCCACCTCCTAGTC 57.767 55.000 0.00 0.00 36.82 2.59
299 300 1.431633 TCTTGGTCCACCTCCTAGTCA 59.568 52.381 0.00 0.00 36.82 3.41
300 301 2.044492 TCTTGGTCCACCTCCTAGTCAT 59.956 50.000 0.00 0.00 36.82 3.06
301 302 2.642171 TGGTCCACCTCCTAGTCATT 57.358 50.000 0.00 0.00 36.82 2.57
302 303 2.187958 TGGTCCACCTCCTAGTCATTG 58.812 52.381 0.00 0.00 36.82 2.82
303 304 2.188817 GGTCCACCTCCTAGTCATTGT 58.811 52.381 0.00 0.00 0.00 2.71
304 305 3.245839 TGGTCCACCTCCTAGTCATTGTA 60.246 47.826 0.00 0.00 36.82 2.41
305 306 3.967987 GGTCCACCTCCTAGTCATTGTAT 59.032 47.826 0.00 0.00 0.00 2.29
306 307 5.145564 GGTCCACCTCCTAGTCATTGTATA 58.854 45.833 0.00 0.00 0.00 1.47
307 308 5.244178 GGTCCACCTCCTAGTCATTGTATAG 59.756 48.000 0.00 0.00 0.00 1.31
308 309 5.834204 GTCCACCTCCTAGTCATTGTATAGT 59.166 44.000 0.00 0.00 0.00 2.12
309 310 6.324254 GTCCACCTCCTAGTCATTGTATAGTT 59.676 42.308 0.00 0.00 0.00 2.24
310 311 6.323996 TCCACCTCCTAGTCATTGTATAGTTG 59.676 42.308 0.00 0.00 0.00 3.16
311 312 6.323996 CCACCTCCTAGTCATTGTATAGTTGA 59.676 42.308 0.00 0.00 0.00 3.18
312 313 7.429633 CACCTCCTAGTCATTGTATAGTTGAG 58.570 42.308 0.00 0.00 0.00 3.02
313 314 6.551601 ACCTCCTAGTCATTGTATAGTTGAGG 59.448 42.308 0.00 0.00 40.19 3.86
314 315 6.551601 CCTCCTAGTCATTGTATAGTTGAGGT 59.448 42.308 0.00 0.00 31.94 3.85
315 316 7.070074 CCTCCTAGTCATTGTATAGTTGAGGTT 59.930 40.741 0.00 0.00 31.94 3.50
316 317 7.782049 TCCTAGTCATTGTATAGTTGAGGTTG 58.218 38.462 0.00 0.00 0.00 3.77
317 318 7.618117 TCCTAGTCATTGTATAGTTGAGGTTGA 59.382 37.037 0.00 0.00 0.00 3.18
318 319 7.923344 CCTAGTCATTGTATAGTTGAGGTTGAG 59.077 40.741 0.00 0.00 0.00 3.02
319 320 6.644347 AGTCATTGTATAGTTGAGGTTGAGG 58.356 40.000 0.00 0.00 0.00 3.86
320 321 5.294552 GTCATTGTATAGTTGAGGTTGAGGC 59.705 44.000 0.00 0.00 0.00 4.70
321 322 3.906720 TGTATAGTTGAGGTTGAGGCC 57.093 47.619 0.00 0.00 0.00 5.19
322 323 2.504175 TGTATAGTTGAGGTTGAGGCCC 59.496 50.000 0.00 0.00 0.00 5.80
323 324 1.668826 ATAGTTGAGGTTGAGGCCCA 58.331 50.000 0.00 0.00 0.00 5.36
324 325 0.690762 TAGTTGAGGTTGAGGCCCAC 59.309 55.000 0.00 0.00 0.00 4.61
325 326 1.603739 GTTGAGGTTGAGGCCCACC 60.604 63.158 0.00 3.17 0.00 4.61
335 336 4.043100 GGCCCACCTGGTACACCC 62.043 72.222 0.00 0.00 36.04 4.61
336 337 3.253838 GCCCACCTGGTACACCCA 61.254 66.667 0.00 0.00 42.51 4.51
337 338 2.612493 GCCCACCTGGTACACCCAT 61.612 63.158 0.00 0.00 44.15 4.00
338 339 1.276140 GCCCACCTGGTACACCCATA 61.276 60.000 0.00 0.00 44.15 2.74
339 340 1.518367 CCCACCTGGTACACCCATAT 58.482 55.000 0.00 0.00 44.15 1.78
340 341 2.696775 CCCACCTGGTACACCCATATA 58.303 52.381 0.00 0.00 44.15 0.86
341 342 3.256704 CCCACCTGGTACACCCATATAT 58.743 50.000 0.00 0.00 44.15 0.86
342 343 4.431378 CCCACCTGGTACACCCATATATA 58.569 47.826 0.00 0.00 44.15 0.86
343 344 4.224370 CCCACCTGGTACACCCATATATAC 59.776 50.000 0.00 0.00 44.15 1.47
344 345 4.081862 CCACCTGGTACACCCATATATACG 60.082 50.000 0.00 0.00 44.15 3.06
345 346 4.525487 CACCTGGTACACCCATATATACGT 59.475 45.833 0.00 0.00 44.15 3.57
346 347 4.525487 ACCTGGTACACCCATATATACGTG 59.475 45.833 0.00 8.95 44.15 4.49
347 348 4.491676 CTGGTACACCCATATATACGTGC 58.508 47.826 0.00 0.00 44.15 5.34
348 349 3.057386 TGGTACACCCATATATACGTGCG 60.057 47.826 0.00 0.00 38.72 5.34
349 350 3.057315 GGTACACCCATATATACGTGCGT 60.057 47.826 0.00 2.05 0.00 5.24
350 351 3.738830 ACACCCATATATACGTGCGTT 57.261 42.857 1.66 0.00 0.00 4.84
351 352 4.852134 ACACCCATATATACGTGCGTTA 57.148 40.909 1.66 0.00 0.00 3.18
352 353 5.395682 ACACCCATATATACGTGCGTTAT 57.604 39.130 1.66 4.10 0.00 1.89
353 354 5.165676 ACACCCATATATACGTGCGTTATG 58.834 41.667 1.66 5.40 0.00 1.90
354 355 5.165676 CACCCATATATACGTGCGTTATGT 58.834 41.667 1.66 0.00 0.00 2.29
355 356 6.072008 ACACCCATATATACGTGCGTTATGTA 60.072 38.462 1.66 0.00 35.35 2.29
356 357 6.252015 CACCCATATATACGTGCGTTATGTAC 59.748 42.308 1.66 0.00 33.76 2.90
357 358 5.745294 CCCATATATACGTGCGTTATGTACC 59.255 44.000 1.66 0.00 33.76 3.34
358 359 5.453266 CCATATATACGTGCGTTATGTACCG 59.547 44.000 1.66 0.00 33.76 4.02
359 360 4.747540 ATATACGTGCGTTATGTACCGA 57.252 40.909 1.66 0.00 33.76 4.69
360 361 3.631145 ATACGTGCGTTATGTACCGAT 57.369 42.857 1.66 0.00 33.76 4.18
361 362 1.831343 ACGTGCGTTATGTACCGATC 58.169 50.000 0.00 0.00 0.00 3.69
362 363 1.132834 ACGTGCGTTATGTACCGATCA 59.867 47.619 0.00 0.00 0.00 2.92
363 364 2.186891 CGTGCGTTATGTACCGATCAA 58.813 47.619 0.00 0.00 0.00 2.57
364 365 2.792674 CGTGCGTTATGTACCGATCAAT 59.207 45.455 0.00 0.00 0.00 2.57
365 366 3.976306 CGTGCGTTATGTACCGATCAATA 59.024 43.478 0.00 0.00 0.00 1.90
366 367 4.143680 CGTGCGTTATGTACCGATCAATAC 60.144 45.833 0.00 0.00 0.00 1.89
367 368 4.741185 GTGCGTTATGTACCGATCAATACA 59.259 41.667 8.16 8.16 35.82 2.29
368 369 5.404366 GTGCGTTATGTACCGATCAATACAT 59.596 40.000 18.14 18.14 43.02 2.29
369 370 5.986741 TGCGTTATGTACCGATCAATACATT 59.013 36.000 18.91 8.08 41.27 2.71
370 371 6.074034 TGCGTTATGTACCGATCAATACATTG 60.074 38.462 18.91 12.67 41.27 2.82
382 383 4.746729 TCAATACATTGAGTTGCATTGCC 58.253 39.130 6.12 0.00 41.51 4.52
383 384 4.220163 TCAATACATTGAGTTGCATTGCCA 59.780 37.500 6.12 0.00 41.51 4.92
384 385 4.804868 ATACATTGAGTTGCATTGCCAA 57.195 36.364 6.12 3.40 32.46 4.52
385 386 3.472283 ACATTGAGTTGCATTGCCAAA 57.528 38.095 6.12 0.00 32.46 3.28
386 387 3.395639 ACATTGAGTTGCATTGCCAAAG 58.604 40.909 6.12 2.98 32.46 2.77
387 388 1.868469 TTGAGTTGCATTGCCAAAGC 58.132 45.000 6.12 0.00 40.48 3.51
398 399 2.291209 TGCCAAAGCATTCTCTTCCA 57.709 45.000 0.00 0.00 46.52 3.53
399 400 2.596346 TGCCAAAGCATTCTCTTCCAA 58.404 42.857 0.00 0.00 46.52 3.53
400 401 2.964464 TGCCAAAGCATTCTCTTCCAAA 59.036 40.909 0.00 0.00 46.52 3.28
401 402 3.387374 TGCCAAAGCATTCTCTTCCAAAA 59.613 39.130 0.00 0.00 46.52 2.44
402 403 4.141756 TGCCAAAGCATTCTCTTCCAAAAA 60.142 37.500 0.00 0.00 46.52 1.94
403 404 4.999311 GCCAAAGCATTCTCTTCCAAAAAT 59.001 37.500 0.00 0.00 39.53 1.82
404 405 5.121298 GCCAAAGCATTCTCTTCCAAAAATC 59.879 40.000 0.00 0.00 39.53 2.17
405 406 6.461640 CCAAAGCATTCTCTTCCAAAAATCT 58.538 36.000 0.00 0.00 0.00 2.40
406 407 6.367969 CCAAAGCATTCTCTTCCAAAAATCTG 59.632 38.462 0.00 0.00 0.00 2.90
407 408 6.906157 AAGCATTCTCTTCCAAAAATCTGA 57.094 33.333 0.00 0.00 0.00 3.27
408 409 6.906157 AGCATTCTCTTCCAAAAATCTGAA 57.094 33.333 0.00 0.00 0.00 3.02
409 410 7.477945 AGCATTCTCTTCCAAAAATCTGAAT 57.522 32.000 0.00 0.00 0.00 2.57
410 411 7.321153 AGCATTCTCTTCCAAAAATCTGAATG 58.679 34.615 0.00 0.00 41.09 2.67
411 412 7.521509 CATTCTCTTCCAAAAATCTGAATGC 57.478 36.000 0.00 0.00 35.10 3.56
412 413 6.906157 TTCTCTTCCAAAAATCTGAATGCT 57.094 33.333 0.00 0.00 0.00 3.79
413 414 6.506500 TCTCTTCCAAAAATCTGAATGCTC 57.493 37.500 0.00 0.00 0.00 4.26
414 415 6.243900 TCTCTTCCAAAAATCTGAATGCTCT 58.756 36.000 0.00 0.00 0.00 4.09
415 416 6.718454 TCTCTTCCAAAAATCTGAATGCTCTT 59.282 34.615 0.00 0.00 0.00 2.85
416 417 7.884877 TCTCTTCCAAAAATCTGAATGCTCTTA 59.115 33.333 0.00 0.00 0.00 2.10
417 418 8.585471 TCTTCCAAAAATCTGAATGCTCTTAT 57.415 30.769 0.00 0.00 0.00 1.73
418 419 9.685276 TCTTCCAAAAATCTGAATGCTCTTATA 57.315 29.630 0.00 0.00 0.00 0.98
429 430 9.261180 TCTGAATGCTCTTATATTTCTTTACGG 57.739 33.333 0.00 0.00 0.00 4.02
430 431 9.261180 CTGAATGCTCTTATATTTCTTTACGGA 57.739 33.333 0.00 0.00 0.00 4.69
431 432 9.261180 TGAATGCTCTTATATTTCTTTACGGAG 57.739 33.333 0.00 0.00 0.00 4.63
432 433 8.608844 AATGCTCTTATATTTCTTTACGGAGG 57.391 34.615 0.00 0.00 0.00 4.30
433 434 6.522054 TGCTCTTATATTTCTTTACGGAGGG 58.478 40.000 0.00 0.00 0.00 4.30
434 435 6.325545 TGCTCTTATATTTCTTTACGGAGGGA 59.674 38.462 0.00 0.00 0.00 4.20
435 436 6.869388 GCTCTTATATTTCTTTACGGAGGGAG 59.131 42.308 0.00 0.00 0.00 4.30
436 437 6.756221 TCTTATATTTCTTTACGGAGGGAGC 58.244 40.000 0.00 0.00 0.00 4.70
437 438 6.325545 TCTTATATTTCTTTACGGAGGGAGCA 59.674 38.462 0.00 0.00 0.00 4.26
438 439 3.713826 ATTTCTTTACGGAGGGAGCAA 57.286 42.857 0.00 0.00 0.00 3.91
439 440 2.762535 TTCTTTACGGAGGGAGCAAG 57.237 50.000 0.00 0.00 0.00 4.01
440 441 1.640917 TCTTTACGGAGGGAGCAAGT 58.359 50.000 0.00 0.00 0.00 3.16
441 442 2.811410 TCTTTACGGAGGGAGCAAGTA 58.189 47.619 0.00 0.00 0.00 2.24
442 443 3.371965 TCTTTACGGAGGGAGCAAGTAT 58.628 45.455 0.00 0.00 0.00 2.12
443 444 3.773119 TCTTTACGGAGGGAGCAAGTATT 59.227 43.478 0.00 0.00 0.00 1.89
444 445 4.224370 TCTTTACGGAGGGAGCAAGTATTT 59.776 41.667 0.00 0.00 0.00 1.40
445 446 2.403252 ACGGAGGGAGCAAGTATTTG 57.597 50.000 0.00 0.00 37.36 2.32
446 447 1.628846 ACGGAGGGAGCAAGTATTTGT 59.371 47.619 0.00 0.00 36.65 2.83
447 448 2.835764 ACGGAGGGAGCAAGTATTTGTA 59.164 45.455 0.00 0.00 36.65 2.41
448 449 3.262405 ACGGAGGGAGCAAGTATTTGTAA 59.738 43.478 0.00 0.00 36.65 2.41
449 450 4.080526 ACGGAGGGAGCAAGTATTTGTAAT 60.081 41.667 0.00 0.00 36.65 1.89
450 451 4.273480 CGGAGGGAGCAAGTATTTGTAATG 59.727 45.833 0.00 0.00 36.65 1.90
451 452 5.437060 GGAGGGAGCAAGTATTTGTAATGA 58.563 41.667 0.00 0.00 36.65 2.57
452 453 5.885912 GGAGGGAGCAAGTATTTGTAATGAA 59.114 40.000 0.00 0.00 36.65 2.57
453 454 6.377146 GGAGGGAGCAAGTATTTGTAATGAAA 59.623 38.462 0.00 0.00 36.65 2.69
454 455 7.158099 AGGGAGCAAGTATTTGTAATGAAAC 57.842 36.000 0.00 0.00 36.65 2.78
455 456 6.719370 AGGGAGCAAGTATTTGTAATGAAACA 59.281 34.615 0.00 0.00 36.65 2.83
456 457 7.232534 AGGGAGCAAGTATTTGTAATGAAACAA 59.767 33.333 0.00 0.00 37.58 2.83
910 911 4.920340 CACTCCAGCAGATATACGCTAAAG 59.080 45.833 0.00 2.75 36.50 1.85
964 965 1.593414 CGCGCGTAAACTGCCAAAAC 61.593 55.000 24.19 0.00 0.00 2.43
965 966 1.272784 GCGCGTAAACTGCCAAAACC 61.273 55.000 8.43 0.00 0.00 3.27
1141 1149 1.228644 TTCATGGCCTTGCTGCAGT 60.229 52.632 16.64 0.00 0.00 4.40
1143 1151 2.749044 ATGGCCTTGCTGCAGTCG 60.749 61.111 16.64 3.84 0.00 4.18
1148 1156 1.234615 GCCTTGCTGCAGTCGGTTAA 61.235 55.000 16.64 1.09 0.00 2.01
1150 1158 1.512926 CTTGCTGCAGTCGGTTAACT 58.487 50.000 16.64 0.00 0.00 2.24
1162 1170 1.196127 CGGTTAACTCCAAAAGCGACC 59.804 52.381 5.42 0.00 46.43 4.79
1200 1208 1.080025 CCCCACTTTCTCGGTCGAC 60.080 63.158 7.13 7.13 0.00 4.20
1833 1948 7.544566 ACTGATGTGTACCGAAACTTTATACAG 59.455 37.037 0.00 0.00 0.00 2.74
1853 1968 1.610522 GCTTTCAAGACATGCTGGTGT 59.389 47.619 0.00 0.00 34.39 4.16
1883 1998 4.491554 TTTTTGAAAACAACGTGCATCG 57.508 36.364 7.07 7.07 46.00 3.84
1890 2005 1.581912 CAACGTGCATCGCAGATGC 60.582 57.895 26.21 26.21 45.12 3.91
1892 2007 2.893895 CGTGCATCGCAGATGCCT 60.894 61.111 28.26 0.00 45.12 4.75
1894 2009 1.825285 CGTGCATCGCAGATGCCTAC 61.825 60.000 28.26 22.18 45.12 3.18
1899 2014 2.350804 GCATCGCAGATGCCTACATATG 59.649 50.000 24.01 0.00 46.18 1.78
1914 2029 4.357918 ACATATGCTCACCCCTATCAAC 57.642 45.455 1.58 0.00 0.00 3.18
1918 2033 1.479323 TGCTCACCCCTATCAACGTAC 59.521 52.381 0.00 0.00 0.00 3.67
1924 2039 1.202486 CCCCTATCAACGTACGCACAT 60.202 52.381 16.72 6.91 0.00 3.21
1929 2044 4.855388 CCTATCAACGTACGCACATATACC 59.145 45.833 16.72 0.00 0.00 2.73
1930 2045 3.082698 TCAACGTACGCACATATACCC 57.917 47.619 16.72 0.00 0.00 3.69
1940 2055 4.705507 ACGCACATATACCCTACCTCTATG 59.294 45.833 0.00 0.00 0.00 2.23
1945 2060 5.952947 ACATATACCCTACCTCTATGAGCAC 59.047 44.000 0.00 0.00 0.00 4.40
1952 2067 5.184864 CCCTACCTCTATGAGCACTTGATAG 59.815 48.000 0.00 0.00 0.00 2.08
1966 2081 8.038492 AGCACTTGATAGAAACATCTTCTTTC 57.962 34.615 0.00 0.00 0.00 2.62
1998 2113 6.237463 CGAACATCGTCGAAACATCTGAAATA 60.237 38.462 0.00 0.00 43.86 1.40
2205 2320 8.343168 AGTATAAAATTCGGTGAAAACCATCA 57.657 30.769 0.00 0.00 0.00 3.07
2228 2343 1.488812 ACCCGCTGATTAGGCACATAA 59.511 47.619 0.00 0.00 0.00 1.90
2229 2344 1.873591 CCCGCTGATTAGGCACATAAC 59.126 52.381 0.00 0.00 0.00 1.89
2250 2365 3.072330 ACAGGACATCACAATACCACACA 59.928 43.478 0.00 0.00 0.00 3.72
2256 2371 5.255687 ACATCACAATACCACACACATCAT 58.744 37.500 0.00 0.00 0.00 2.45
2299 2414 2.917227 CCCACACCACAAAGGCCC 60.917 66.667 0.00 0.00 43.14 5.80
2317 2432 1.028905 CCCGAGAAGCCACACAAAAA 58.971 50.000 0.00 0.00 0.00 1.94
2322 2437 3.057315 CGAGAAGCCACACAAAAATCCAT 60.057 43.478 0.00 0.00 0.00 3.41
2323 2438 4.240096 GAGAAGCCACACAAAAATCCATG 58.760 43.478 0.00 0.00 0.00 3.66
2324 2439 2.460757 AGCCACACAAAAATCCATGC 57.539 45.000 0.00 0.00 0.00 4.06
2325 2440 1.002315 AGCCACACAAAAATCCATGCC 59.998 47.619 0.00 0.00 0.00 4.40
2326 2441 1.270732 GCCACACAAAAATCCATGCCA 60.271 47.619 0.00 0.00 0.00 4.92
2327 2442 2.809665 GCCACACAAAAATCCATGCCAA 60.810 45.455 0.00 0.00 0.00 4.52
2328 2443 3.068560 CCACACAAAAATCCATGCCAAG 58.931 45.455 0.00 0.00 0.00 3.61
2462 2577 1.031571 TCATTGCCGCATGGACTTCC 61.032 55.000 0.00 0.00 37.49 3.46
2546 2669 2.258726 AAACCCGCCTTGCTCGTTC 61.259 57.895 0.00 0.00 0.00 3.95
2547 2670 2.951475 AAACCCGCCTTGCTCGTTCA 62.951 55.000 0.00 0.00 0.00 3.18
2548 2671 3.423154 CCCGCCTTGCTCGTTCAC 61.423 66.667 0.00 0.00 0.00 3.18
2549 2672 2.664851 CCGCCTTGCTCGTTCACA 60.665 61.111 0.00 0.00 0.00 3.58
2550 2673 2.034879 CCGCCTTGCTCGTTCACAT 61.035 57.895 0.00 0.00 0.00 3.21
2551 2674 0.739462 CCGCCTTGCTCGTTCACATA 60.739 55.000 0.00 0.00 0.00 2.29
2552 2675 0.647410 CGCCTTGCTCGTTCACATAG 59.353 55.000 0.00 0.00 0.00 2.23
2553 2676 0.375106 GCCTTGCTCGTTCACATAGC 59.625 55.000 0.00 0.00 36.77 2.97
2554 2677 1.725641 CCTTGCTCGTTCACATAGCA 58.274 50.000 0.00 0.00 44.15 3.49
2555 2678 1.662629 CCTTGCTCGTTCACATAGCAG 59.337 52.381 0.00 0.00 46.17 4.24
2556 2679 2.341257 CTTGCTCGTTCACATAGCAGT 58.659 47.619 0.00 0.00 46.17 4.40
2557 2680 2.455674 TGCTCGTTCACATAGCAGTT 57.544 45.000 0.00 0.00 41.15 3.16
2558 2681 2.068519 TGCTCGTTCACATAGCAGTTG 58.931 47.619 0.00 0.00 41.15 3.16
2559 2682 1.201965 GCTCGTTCACATAGCAGTTGC 60.202 52.381 0.00 0.00 42.49 4.17
2560 2683 1.394917 CTCGTTCACATAGCAGTTGCC 59.605 52.381 0.00 0.00 43.38 4.52
2561 2684 1.155889 CGTTCACATAGCAGTTGCCA 58.844 50.000 0.00 0.00 43.38 4.92
2562 2685 1.129251 CGTTCACATAGCAGTTGCCAG 59.871 52.381 0.00 0.00 43.38 4.85
2563 2686 2.426522 GTTCACATAGCAGTTGCCAGA 58.573 47.619 0.00 0.00 43.38 3.86
2564 2687 2.099141 TCACATAGCAGTTGCCAGAC 57.901 50.000 0.00 0.00 43.38 3.51
2565 2688 1.625315 TCACATAGCAGTTGCCAGACT 59.375 47.619 0.00 0.00 43.38 3.24
2566 2689 2.831526 TCACATAGCAGTTGCCAGACTA 59.168 45.455 0.00 0.00 43.38 2.59
2567 2690 3.118992 TCACATAGCAGTTGCCAGACTAG 60.119 47.826 0.00 0.00 43.38 2.57
2568 2691 2.208431 CATAGCAGTTGCCAGACTAGC 58.792 52.381 0.00 0.00 43.38 3.42
2569 2692 0.537188 TAGCAGTTGCCAGACTAGCC 59.463 55.000 0.00 0.00 43.38 3.93
2570 2693 1.003355 GCAGTTGCCAGACTAGCCA 60.003 57.895 0.00 0.00 34.31 4.75
2571 2694 1.301677 GCAGTTGCCAGACTAGCCAC 61.302 60.000 0.00 0.00 34.31 5.01
2572 2695 0.674895 CAGTTGCCAGACTAGCCACC 60.675 60.000 0.00 0.00 0.00 4.61
2573 2696 1.127567 AGTTGCCAGACTAGCCACCA 61.128 55.000 0.00 0.00 0.00 4.17
2574 2697 0.250727 GTTGCCAGACTAGCCACCAA 60.251 55.000 0.00 0.00 0.00 3.67
2575 2698 0.250727 TTGCCAGACTAGCCACCAAC 60.251 55.000 0.00 0.00 0.00 3.77
2576 2699 1.741770 GCCAGACTAGCCACCAACG 60.742 63.158 0.00 0.00 0.00 4.10
2577 2700 1.972198 CCAGACTAGCCACCAACGA 59.028 57.895 0.00 0.00 0.00 3.85
2578 2701 0.389948 CCAGACTAGCCACCAACGAC 60.390 60.000 0.00 0.00 0.00 4.34
2579 2702 0.389948 CAGACTAGCCACCAACGACC 60.390 60.000 0.00 0.00 0.00 4.79
2580 2703 0.830444 AGACTAGCCACCAACGACCA 60.830 55.000 0.00 0.00 0.00 4.02
2581 2704 0.669625 GACTAGCCACCAACGACCAC 60.670 60.000 0.00 0.00 0.00 4.16
2582 2705 1.375523 CTAGCCACCAACGACCACC 60.376 63.158 0.00 0.00 0.00 4.61
2583 2706 3.229156 TAGCCACCAACGACCACCG 62.229 63.158 0.00 0.00 45.44 4.94
2585 2708 4.619227 CCACCAACGACCACCGCT 62.619 66.667 0.00 0.00 43.32 5.52
2586 2709 2.340809 CACCAACGACCACCGCTA 59.659 61.111 0.00 0.00 43.32 4.26
2587 2710 2.025418 CACCAACGACCACCGCTAC 61.025 63.158 0.00 0.00 43.32 3.58
2588 2711 2.433664 CCAACGACCACCGCTACC 60.434 66.667 0.00 0.00 43.32 3.18
2589 2712 2.340809 CAACGACCACCGCTACCA 59.659 61.111 0.00 0.00 43.32 3.25
2590 2713 1.301087 CAACGACCACCGCTACCAA 60.301 57.895 0.00 0.00 43.32 3.67
2591 2714 1.301165 AACGACCACCGCTACCAAC 60.301 57.895 0.00 0.00 43.32 3.77
2592 2715 2.433664 CGACCACCGCTACCAACC 60.434 66.667 0.00 0.00 0.00 3.77
2593 2716 2.745037 GACCACCGCTACCAACCA 59.255 61.111 0.00 0.00 0.00 3.67
2594 2717 1.670083 GACCACCGCTACCAACCAC 60.670 63.158 0.00 0.00 0.00 4.16
2595 2718 2.740826 CCACCGCTACCAACCACG 60.741 66.667 0.00 0.00 0.00 4.94
2598 2721 4.011517 CCGCTACCAACCACGGGT 62.012 66.667 0.00 0.00 41.95 5.28
2600 2723 2.030958 CGCTACCAACCACGGGTTC 61.031 63.158 5.45 0.00 43.05 3.62
2601 2724 1.673337 GCTACCAACCACGGGTTCC 60.673 63.158 5.45 0.00 43.05 3.62
2602 2725 2.063774 CTACCAACCACGGGTTCCT 58.936 57.895 5.45 0.00 43.05 3.36
2603 2726 0.036671 CTACCAACCACGGGTTCCTC 60.037 60.000 5.45 0.00 43.05 3.71
2604 2727 1.482748 TACCAACCACGGGTTCCTCC 61.483 60.000 5.45 0.00 43.05 4.30
2605 2728 2.824880 CCAACCACGGGTTCCTCCA 61.825 63.158 5.45 0.00 43.05 3.86
2606 2729 1.149627 CAACCACGGGTTCCTCCAA 59.850 57.895 5.45 0.00 43.05 3.53
2607 2730 1.149854 AACCACGGGTTCCTCCAAC 59.850 57.895 2.81 0.00 43.05 3.77
2630 2753 3.985912 GAACGAATTCCAGAACGGTAC 57.014 47.619 0.00 0.00 35.57 3.34
2631 2754 3.582780 GAACGAATTCCAGAACGGTACT 58.417 45.455 0.00 0.00 35.57 2.73
2632 2755 3.227810 ACGAATTCCAGAACGGTACTC 57.772 47.619 0.00 0.00 35.57 2.59
2633 2756 2.094338 ACGAATTCCAGAACGGTACTCC 60.094 50.000 0.00 0.00 35.57 3.85
2634 2757 2.737679 CGAATTCCAGAACGGTACTCCC 60.738 54.545 0.00 0.00 35.57 4.30
2635 2758 1.201424 ATTCCAGAACGGTACTCCCC 58.799 55.000 0.00 0.00 35.57 4.81
2636 2759 0.178926 TTCCAGAACGGTACTCCCCA 60.179 55.000 0.00 0.00 35.57 4.96
2637 2760 0.178926 TCCAGAACGGTACTCCCCAA 60.179 55.000 0.00 0.00 35.57 4.12
2638 2761 0.036671 CCAGAACGGTACTCCCCAAC 60.037 60.000 0.00 0.00 0.00 3.77
2639 2762 0.682852 CAGAACGGTACTCCCCAACA 59.317 55.000 0.00 0.00 0.00 3.33
2640 2763 1.071071 CAGAACGGTACTCCCCAACAA 59.929 52.381 0.00 0.00 0.00 2.83
2641 2764 1.346722 AGAACGGTACTCCCCAACAAG 59.653 52.381 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.202623 CAGTAGACGAGCGTGGCC 60.203 66.667 0.00 0.00 0.00 5.36
1 2 2.881352 GCAGTAGACGAGCGTGGC 60.881 66.667 0.00 0.00 0.00 5.01
2 3 2.577112 CGCAGTAGACGAGCGTGG 60.577 66.667 0.00 0.00 45.82 4.94
6 7 1.863880 CGTGTCGCAGTAGACGAGC 60.864 63.158 0.00 0.00 43.70 5.03
7 8 0.518764 GACGTGTCGCAGTAGACGAG 60.519 60.000 0.00 0.00 43.70 4.18
8 9 0.947660 AGACGTGTCGCAGTAGACGA 60.948 55.000 0.00 0.00 43.70 4.20
9 10 0.518764 GAGACGTGTCGCAGTAGACG 60.519 60.000 0.00 0.00 43.70 4.18
10 11 0.179194 GGAGACGTGTCGCAGTAGAC 60.179 60.000 6.62 0.00 41.30 2.59
11 12 2.168947 GGAGACGTGTCGCAGTAGA 58.831 57.895 6.62 0.00 34.09 2.59
12 13 4.767633 GGAGACGTGTCGCAGTAG 57.232 61.111 6.62 0.00 34.09 2.57
24 25 2.047179 GACTGGGTTGGCGGAGAC 60.047 66.667 0.00 0.00 0.00 3.36
25 26 3.319198 GGACTGGGTTGGCGGAGA 61.319 66.667 0.00 0.00 0.00 3.71
26 27 3.636231 TGGACTGGGTTGGCGGAG 61.636 66.667 0.00 0.00 0.00 4.63
27 28 3.948719 GTGGACTGGGTTGGCGGA 61.949 66.667 0.00 0.00 0.00 5.54
29 30 3.567579 ATGGTGGACTGGGTTGGCG 62.568 63.158 0.00 0.00 0.00 5.69
30 31 1.678970 GATGGTGGACTGGGTTGGC 60.679 63.158 0.00 0.00 0.00 4.52
31 32 1.377202 CGATGGTGGACTGGGTTGG 60.377 63.158 0.00 0.00 0.00 3.77
32 33 0.673644 GACGATGGTGGACTGGGTTG 60.674 60.000 0.00 0.00 0.00 3.77
33 34 1.677552 GACGATGGTGGACTGGGTT 59.322 57.895 0.00 0.00 0.00 4.11
34 35 2.646175 CGACGATGGTGGACTGGGT 61.646 63.158 0.00 0.00 0.00 4.51
35 36 1.884075 TTCGACGATGGTGGACTGGG 61.884 60.000 0.00 0.00 30.06 4.45
36 37 0.736325 GTTCGACGATGGTGGACTGG 60.736 60.000 0.00 0.00 30.06 4.00
37 38 1.071019 CGTTCGACGATGGTGGACTG 61.071 60.000 0.00 0.00 46.05 3.51
38 39 1.211969 CGTTCGACGATGGTGGACT 59.788 57.895 0.00 0.00 46.05 3.85
39 40 1.210931 TCGTTCGACGATGGTGGAC 59.789 57.895 0.00 0.00 46.73 4.02
40 41 3.670989 TCGTTCGACGATGGTGGA 58.329 55.556 0.00 0.00 46.73 4.02
48 49 0.781787 TCAATGTGCTTCGTTCGACG 59.218 50.000 0.00 0.00 44.19 5.12
49 50 1.462541 GCTCAATGTGCTTCGTTCGAC 60.463 52.381 0.00 0.00 0.00 4.20
50 51 0.790207 GCTCAATGTGCTTCGTTCGA 59.210 50.000 0.00 0.00 0.00 3.71
51 52 0.792640 AGCTCAATGTGCTTCGTTCG 59.207 50.000 3.73 0.00 37.52 3.95
52 53 1.201855 CGAGCTCAATGTGCTTCGTTC 60.202 52.381 15.40 0.00 41.30 3.95
53 54 0.792640 CGAGCTCAATGTGCTTCGTT 59.207 50.000 15.40 0.00 41.30 3.85
54 55 0.038251 TCGAGCTCAATGTGCTTCGT 60.038 50.000 15.40 0.00 41.30 3.85
55 56 0.368227 GTCGAGCTCAATGTGCTTCG 59.632 55.000 15.40 14.64 41.30 3.79
56 57 1.432514 TGTCGAGCTCAATGTGCTTC 58.567 50.000 15.40 6.28 41.30 3.86
57 58 2.105006 ATGTCGAGCTCAATGTGCTT 57.895 45.000 15.40 0.00 41.30 3.91
58 59 2.094026 TGTATGTCGAGCTCAATGTGCT 60.094 45.455 15.40 9.75 44.24 4.40
59 60 2.029728 GTGTATGTCGAGCTCAATGTGC 59.970 50.000 15.40 0.00 0.00 4.57
60 61 3.515630 AGTGTATGTCGAGCTCAATGTG 58.484 45.455 15.40 0.00 0.00 3.21
61 62 3.876274 AGTGTATGTCGAGCTCAATGT 57.124 42.857 15.40 0.00 0.00 2.71
62 63 4.389992 ACAAAGTGTATGTCGAGCTCAATG 59.610 41.667 15.40 0.00 0.00 2.82
63 64 4.569943 ACAAAGTGTATGTCGAGCTCAAT 58.430 39.130 15.40 6.65 0.00 2.57
64 65 3.990092 ACAAAGTGTATGTCGAGCTCAA 58.010 40.909 15.40 0.00 0.00 3.02
65 66 3.660501 ACAAAGTGTATGTCGAGCTCA 57.339 42.857 15.40 0.00 0.00 4.26
66 67 4.211374 ACAAACAAAGTGTATGTCGAGCTC 59.789 41.667 2.73 2.73 0.00 4.09
67 68 4.024893 CACAAACAAAGTGTATGTCGAGCT 60.025 41.667 0.00 0.00 32.44 4.09
68 69 4.025229 TCACAAACAAAGTGTATGTCGAGC 60.025 41.667 0.00 0.00 38.16 5.03
69 70 5.651172 TCACAAACAAAGTGTATGTCGAG 57.349 39.130 0.00 0.00 38.16 4.04
70 71 4.025229 GCTCACAAACAAAGTGTATGTCGA 60.025 41.667 0.00 0.00 38.16 4.20
71 72 4.211389 GCTCACAAACAAAGTGTATGTCG 58.789 43.478 0.00 0.00 38.16 4.35
72 73 5.168526 TGCTCACAAACAAAGTGTATGTC 57.831 39.130 0.00 0.00 38.16 3.06
73 74 4.036734 CCTGCTCACAAACAAAGTGTATGT 59.963 41.667 0.00 0.00 38.16 2.29
74 75 4.036734 ACCTGCTCACAAACAAAGTGTATG 59.963 41.667 0.00 0.00 38.16 2.39
75 76 4.036734 CACCTGCTCACAAACAAAGTGTAT 59.963 41.667 0.00 0.00 38.16 2.29
76 77 3.376859 CACCTGCTCACAAACAAAGTGTA 59.623 43.478 0.00 0.00 38.16 2.90
77 78 2.164219 CACCTGCTCACAAACAAAGTGT 59.836 45.455 0.00 0.00 38.16 3.55
78 79 2.480073 CCACCTGCTCACAAACAAAGTG 60.480 50.000 0.00 0.00 38.32 3.16
79 80 1.750778 CCACCTGCTCACAAACAAAGT 59.249 47.619 0.00 0.00 0.00 2.66
80 81 1.536709 GCCACCTGCTCACAAACAAAG 60.537 52.381 0.00 0.00 36.87 2.77
81 82 0.459489 GCCACCTGCTCACAAACAAA 59.541 50.000 0.00 0.00 36.87 2.83
82 83 2.114638 GCCACCTGCTCACAAACAA 58.885 52.632 0.00 0.00 36.87 2.83
83 84 3.840437 GCCACCTGCTCACAAACA 58.160 55.556 0.00 0.00 36.87 2.83
96 97 3.512516 GATGCGCCCAAGAGCCAC 61.513 66.667 4.18 0.00 38.15 5.01
97 98 4.802051 GGATGCGCCCAAGAGCCA 62.802 66.667 4.18 0.00 38.15 4.75
107 108 4.467084 TGAAGGACCCGGATGCGC 62.467 66.667 0.73 0.00 0.00 6.09
108 109 2.511600 GTGAAGGACCCGGATGCG 60.512 66.667 0.73 0.00 0.00 4.73
109 110 2.511600 CGTGAAGGACCCGGATGC 60.512 66.667 0.73 0.00 0.00 3.91
110 111 1.153628 GACGTGAAGGACCCGGATG 60.154 63.158 0.73 0.00 0.00 3.51
111 112 2.356780 GGACGTGAAGGACCCGGAT 61.357 63.158 0.73 0.00 0.00 4.18
112 113 2.993264 GGACGTGAAGGACCCGGA 60.993 66.667 0.73 0.00 0.00 5.14
113 114 4.078516 GGGACGTGAAGGACCCGG 62.079 72.222 0.00 0.00 32.74 5.73
129 130 4.072088 GAACTGTTGCGCCGTCGG 62.072 66.667 6.99 6.99 35.95 4.79
130 131 4.409588 CGAACTGTTGCGCCGTCG 62.410 66.667 4.18 0.72 39.07 5.12
131 132 4.719616 GCGAACTGTTGCGCCGTC 62.720 66.667 19.45 0.00 46.93 4.79
136 137 2.096406 CATCGGCGAACTGTTGCG 59.904 61.111 15.93 2.98 0.00 4.85
137 138 1.132640 GACATCGGCGAACTGTTGC 59.867 57.895 15.93 0.00 0.00 4.17
138 139 1.078709 ATGACATCGGCGAACTGTTG 58.921 50.000 15.93 10.09 0.00 3.33
139 140 1.078709 CATGACATCGGCGAACTGTT 58.921 50.000 15.93 0.00 0.00 3.16
140 141 0.246360 TCATGACATCGGCGAACTGT 59.754 50.000 15.93 15.57 0.00 3.55
141 142 0.647410 GTCATGACATCGGCGAACTG 59.353 55.000 21.07 11.80 0.00 3.16
142 143 0.802222 CGTCATGACATCGGCGAACT 60.802 55.000 24.93 0.39 0.00 3.01
143 144 0.800683 TCGTCATGACATCGGCGAAC 60.801 55.000 24.93 9.42 0.00 3.95
144 145 0.109039 TTCGTCATGACATCGGCGAA 60.109 50.000 24.93 17.59 36.26 4.70
145 146 0.525455 CTTCGTCATGACATCGGCGA 60.525 55.000 24.93 13.87 0.00 5.54
146 147 1.482621 CCTTCGTCATGACATCGGCG 61.483 60.000 24.93 10.49 0.00 6.46
147 148 1.154205 CCCTTCGTCATGACATCGGC 61.154 60.000 24.93 0.00 0.00 5.54
148 149 0.459899 TCCCTTCGTCATGACATCGG 59.540 55.000 24.93 18.94 0.00 4.18
149 150 1.135139 AGTCCCTTCGTCATGACATCG 59.865 52.381 24.93 11.96 0.00 3.84
150 151 2.544685 CAGTCCCTTCGTCATGACATC 58.455 52.381 24.93 7.10 0.00 3.06
151 152 1.406069 GCAGTCCCTTCGTCATGACAT 60.406 52.381 24.93 0.00 0.00 3.06
152 153 0.037326 GCAGTCCCTTCGTCATGACA 60.037 55.000 24.93 9.94 0.00 3.58
153 154 0.741221 GGCAGTCCCTTCGTCATGAC 60.741 60.000 16.21 16.21 0.00 3.06
154 155 0.904865 AGGCAGTCCCTTCGTCATGA 60.905 55.000 0.00 0.00 43.06 3.07
155 156 0.824109 TAGGCAGTCCCTTCGTCATG 59.176 55.000 0.00 0.00 43.06 3.07
156 157 0.824759 GTAGGCAGTCCCTTCGTCAT 59.175 55.000 0.00 0.00 43.06 3.06
157 158 0.251653 AGTAGGCAGTCCCTTCGTCA 60.252 55.000 0.00 0.00 43.06 4.35
158 159 0.896226 AAGTAGGCAGTCCCTTCGTC 59.104 55.000 0.00 0.00 43.06 4.20
159 160 0.896226 GAAGTAGGCAGTCCCTTCGT 59.104 55.000 0.00 0.00 43.06 3.85
160 161 0.175989 GGAAGTAGGCAGTCCCTTCG 59.824 60.000 0.00 0.00 43.06 3.79
161 162 0.175989 CGGAAGTAGGCAGTCCCTTC 59.824 60.000 0.00 0.00 43.06 3.46
162 163 0.544595 ACGGAAGTAGGCAGTCCCTT 60.545 55.000 0.00 0.00 46.88 3.95
163 164 1.078710 ACGGAAGTAGGCAGTCCCT 59.921 57.895 0.00 0.00 46.88 4.20
164 165 3.709567 ACGGAAGTAGGCAGTCCC 58.290 61.111 0.00 0.00 46.88 4.46
175 176 2.731976 CTGAACTCCTCGAAAACGGAAG 59.268 50.000 0.00 0.00 0.00 3.46
176 177 2.547218 CCTGAACTCCTCGAAAACGGAA 60.547 50.000 0.00 0.00 0.00 4.30
177 178 1.000506 CCTGAACTCCTCGAAAACGGA 59.999 52.381 0.00 0.00 0.00 4.69
178 179 1.270147 ACCTGAACTCCTCGAAAACGG 60.270 52.381 0.00 0.00 0.00 4.44
179 180 2.059541 GACCTGAACTCCTCGAAAACG 58.940 52.381 0.00 0.00 0.00 3.60
180 181 2.224209 TGGACCTGAACTCCTCGAAAAC 60.224 50.000 0.00 0.00 0.00 2.43
181 182 2.037251 CTGGACCTGAACTCCTCGAAAA 59.963 50.000 0.00 0.00 0.00 2.29
182 183 1.618837 CTGGACCTGAACTCCTCGAAA 59.381 52.381 0.00 0.00 0.00 3.46
183 184 1.257743 CTGGACCTGAACTCCTCGAA 58.742 55.000 0.00 0.00 0.00 3.71
184 185 0.112606 ACTGGACCTGAACTCCTCGA 59.887 55.000 5.22 0.00 0.00 4.04
185 186 0.528470 GACTGGACCTGAACTCCTCG 59.472 60.000 5.22 0.00 0.00 4.63
186 187 1.931635 AGACTGGACCTGAACTCCTC 58.068 55.000 5.22 0.00 0.00 3.71
187 188 2.370189 CAAAGACTGGACCTGAACTCCT 59.630 50.000 5.22 0.00 0.00 3.69
188 189 2.772287 CAAAGACTGGACCTGAACTCC 58.228 52.381 5.22 0.00 0.00 3.85
189 190 2.147150 GCAAAGACTGGACCTGAACTC 58.853 52.381 5.22 0.00 0.00 3.01
190 191 1.541233 CGCAAAGACTGGACCTGAACT 60.541 52.381 5.22 1.71 0.00 3.01
191 192 0.868406 CGCAAAGACTGGACCTGAAC 59.132 55.000 5.22 0.00 0.00 3.18
192 193 0.468226 ACGCAAAGACTGGACCTGAA 59.532 50.000 5.22 0.00 0.00 3.02
193 194 0.033504 GACGCAAAGACTGGACCTGA 59.966 55.000 5.22 0.00 0.00 3.86
194 195 0.034059 AGACGCAAAGACTGGACCTG 59.966 55.000 0.00 0.00 0.00 4.00
195 196 0.318762 GAGACGCAAAGACTGGACCT 59.681 55.000 0.00 0.00 0.00 3.85
196 197 0.670854 GGAGACGCAAAGACTGGACC 60.671 60.000 0.00 0.00 0.00 4.46
197 198 2.828933 GGAGACGCAAAGACTGGAC 58.171 57.895 0.00 0.00 0.00 4.02
243 244 4.929479 TGCATAACCATATATTCACCCCC 58.071 43.478 0.00 0.00 0.00 5.40
244 245 5.951747 ACATGCATAACCATATATTCACCCC 59.048 40.000 0.00 0.00 0.00 4.95
245 246 8.752005 ATACATGCATAACCATATATTCACCC 57.248 34.615 0.00 0.00 0.00 4.61
261 262 9.618890 GGACCAAGATATACAATATACATGCAT 57.381 33.333 0.00 0.00 0.00 3.96
262 263 8.601546 TGGACCAAGATATACAATATACATGCA 58.398 33.333 0.00 0.00 0.00 3.96
263 264 8.883731 GTGGACCAAGATATACAATATACATGC 58.116 37.037 0.00 0.00 0.00 4.06
264 265 9.383519 GGTGGACCAAGATATACAATATACATG 57.616 37.037 0.00 0.00 35.64 3.21
265 266 9.338968 AGGTGGACCAAGATATACAATATACAT 57.661 33.333 0.00 0.00 38.89 2.29
266 267 8.736097 AGGTGGACCAAGATATACAATATACA 57.264 34.615 0.00 0.00 38.89 2.29
267 268 8.258708 GGAGGTGGACCAAGATATACAATATAC 58.741 40.741 0.00 0.00 38.89 1.47
268 269 8.184249 AGGAGGTGGACCAAGATATACAATATA 58.816 37.037 0.00 0.00 38.89 0.86
269 270 7.025620 AGGAGGTGGACCAAGATATACAATAT 58.974 38.462 0.00 0.00 38.89 1.28
270 271 6.390504 AGGAGGTGGACCAAGATATACAATA 58.609 40.000 0.00 0.00 38.89 1.90
271 272 5.227593 AGGAGGTGGACCAAGATATACAAT 58.772 41.667 0.00 0.00 38.89 2.71
272 273 4.631234 AGGAGGTGGACCAAGATATACAA 58.369 43.478 0.00 0.00 38.89 2.41
273 274 4.280789 AGGAGGTGGACCAAGATATACA 57.719 45.455 0.00 0.00 38.89 2.29
274 275 5.395611 ACTAGGAGGTGGACCAAGATATAC 58.604 45.833 0.00 0.00 38.89 1.47
275 276 5.135533 TGACTAGGAGGTGGACCAAGATATA 59.864 44.000 0.00 0.00 38.89 0.86
276 277 4.078571 TGACTAGGAGGTGGACCAAGATAT 60.079 45.833 0.00 0.00 38.89 1.63
277 278 3.271225 TGACTAGGAGGTGGACCAAGATA 59.729 47.826 0.00 0.00 38.89 1.98
278 279 2.044492 TGACTAGGAGGTGGACCAAGAT 59.956 50.000 0.00 0.00 38.89 2.40
279 280 1.431633 TGACTAGGAGGTGGACCAAGA 59.568 52.381 0.00 0.00 38.89 3.02
280 281 1.938585 TGACTAGGAGGTGGACCAAG 58.061 55.000 0.00 0.00 38.89 3.61
281 282 2.571653 CAATGACTAGGAGGTGGACCAA 59.428 50.000 0.00 0.00 38.89 3.67
282 283 2.187958 CAATGACTAGGAGGTGGACCA 58.812 52.381 0.00 0.00 38.89 4.02
283 284 2.188817 ACAATGACTAGGAGGTGGACC 58.811 52.381 0.00 0.00 0.00 4.46
284 285 5.834204 ACTATACAATGACTAGGAGGTGGAC 59.166 44.000 0.00 0.00 0.00 4.02
285 286 6.027025 ACTATACAATGACTAGGAGGTGGA 57.973 41.667 0.00 0.00 0.00 4.02
286 287 6.323996 TCAACTATACAATGACTAGGAGGTGG 59.676 42.308 0.00 0.00 0.00 4.61
287 288 7.348080 TCAACTATACAATGACTAGGAGGTG 57.652 40.000 0.00 0.00 0.00 4.00
288 289 6.551601 CCTCAACTATACAATGACTAGGAGGT 59.448 42.308 0.00 0.00 33.95 3.85
289 290 6.551601 ACCTCAACTATACAATGACTAGGAGG 59.448 42.308 0.00 0.00 42.02 4.30
290 291 7.589958 ACCTCAACTATACAATGACTAGGAG 57.410 40.000 0.00 0.00 0.00 3.69
291 292 7.618117 TCAACCTCAACTATACAATGACTAGGA 59.382 37.037 0.00 0.00 0.00 2.94
292 293 7.782049 TCAACCTCAACTATACAATGACTAGG 58.218 38.462 0.00 0.00 0.00 3.02
293 294 7.923344 CCTCAACCTCAACTATACAATGACTAG 59.077 40.741 0.00 0.00 0.00 2.57
294 295 7.632898 GCCTCAACCTCAACTATACAATGACTA 60.633 40.741 0.00 0.00 0.00 2.59
295 296 6.644347 CCTCAACCTCAACTATACAATGACT 58.356 40.000 0.00 0.00 0.00 3.41
296 297 5.294552 GCCTCAACCTCAACTATACAATGAC 59.705 44.000 0.00 0.00 0.00 3.06
297 298 5.428253 GCCTCAACCTCAACTATACAATGA 58.572 41.667 0.00 0.00 0.00 2.57
298 299 4.576463 GGCCTCAACCTCAACTATACAATG 59.424 45.833 0.00 0.00 0.00 2.82
299 300 4.385310 GGGCCTCAACCTCAACTATACAAT 60.385 45.833 0.84 0.00 0.00 2.71
300 301 3.054655 GGGCCTCAACCTCAACTATACAA 60.055 47.826 0.84 0.00 0.00 2.41
301 302 2.504175 GGGCCTCAACCTCAACTATACA 59.496 50.000 0.84 0.00 0.00 2.29
302 303 2.504175 TGGGCCTCAACCTCAACTATAC 59.496 50.000 4.53 0.00 0.00 1.47
303 304 2.504175 GTGGGCCTCAACCTCAACTATA 59.496 50.000 4.53 0.00 0.00 1.31
304 305 1.282157 GTGGGCCTCAACCTCAACTAT 59.718 52.381 4.53 0.00 0.00 2.12
305 306 0.690762 GTGGGCCTCAACCTCAACTA 59.309 55.000 4.53 0.00 0.00 2.24
306 307 1.456287 GTGGGCCTCAACCTCAACT 59.544 57.895 4.53 0.00 0.00 3.16
307 308 1.603739 GGTGGGCCTCAACCTCAAC 60.604 63.158 4.53 0.00 0.00 3.18
308 309 1.774217 AGGTGGGCCTCAACCTCAA 60.774 57.895 16.67 0.00 42.67 3.02
309 310 2.121963 AGGTGGGCCTCAACCTCA 60.122 61.111 16.67 0.00 42.67 3.86
310 311 2.352805 CAGGTGGGCCTCAACCTC 59.647 66.667 18.79 0.00 44.97 3.85
311 312 2.706341 TACCAGGTGGGCCTCAACCT 62.706 60.000 16.67 16.67 44.97 3.50
312 313 2.228480 TACCAGGTGGGCCTCAACC 61.228 63.158 4.53 13.13 44.97 3.77
313 314 1.002502 GTACCAGGTGGGCCTCAAC 60.003 63.158 4.53 1.10 44.97 3.18
314 315 1.462432 TGTACCAGGTGGGCCTCAA 60.462 57.895 4.53 0.00 44.97 3.02
315 316 2.205749 TGTACCAGGTGGGCCTCA 59.794 61.111 4.53 0.00 44.97 3.86
316 317 2.669240 GTGTACCAGGTGGGCCTC 59.331 66.667 4.53 0.00 44.97 4.70
318 319 4.043100 GGGTGTACCAGGTGGGCC 62.043 72.222 0.76 0.00 42.05 5.80
319 320 3.253838 TGGGTGTACCAGGTGGGC 61.254 66.667 0.76 0.00 46.80 5.36
327 328 3.057315 ACGCACGTATATATGGGTGTACC 60.057 47.826 19.53 0.00 37.56 3.34
328 329 4.164822 ACGCACGTATATATGGGTGTAC 57.835 45.455 19.53 0.00 37.56 2.90
329 330 4.852134 AACGCACGTATATATGGGTGTA 57.148 40.909 20.87 0.00 38.30 2.90
330 331 3.738830 AACGCACGTATATATGGGTGT 57.261 42.857 16.11 16.11 40.78 4.16
331 332 5.165676 ACATAACGCACGTATATATGGGTG 58.834 41.667 14.87 14.87 40.73 4.61
332 333 5.395682 ACATAACGCACGTATATATGGGT 57.604 39.130 14.43 3.52 43.16 4.51
333 334 5.745294 GGTACATAACGCACGTATATATGGG 59.255 44.000 14.43 3.33 35.06 4.00
334 335 5.453266 CGGTACATAACGCACGTATATATGG 59.547 44.000 14.43 0.00 0.00 2.74
335 336 6.250089 TCGGTACATAACGCACGTATATATG 58.750 40.000 10.32 10.32 0.00 1.78
336 337 6.421377 TCGGTACATAACGCACGTATATAT 57.579 37.500 0.00 0.00 0.00 0.86
337 338 5.854431 TCGGTACATAACGCACGTATATA 57.146 39.130 0.00 0.00 0.00 0.86
338 339 4.747540 TCGGTACATAACGCACGTATAT 57.252 40.909 0.00 0.00 0.00 0.86
339 340 4.213059 TGATCGGTACATAACGCACGTATA 59.787 41.667 0.00 0.00 0.00 1.47
340 341 3.003585 TGATCGGTACATAACGCACGTAT 59.996 43.478 0.00 0.00 0.00 3.06
341 342 2.354199 TGATCGGTACATAACGCACGTA 59.646 45.455 0.00 0.00 0.00 3.57
342 343 1.132834 TGATCGGTACATAACGCACGT 59.867 47.619 0.00 0.00 0.00 4.49
343 344 1.830086 TGATCGGTACATAACGCACG 58.170 50.000 0.00 0.00 0.00 5.34
344 345 4.741185 TGTATTGATCGGTACATAACGCAC 59.259 41.667 6.05 0.00 0.00 5.34
345 346 4.934515 TGTATTGATCGGTACATAACGCA 58.065 39.130 6.05 0.00 0.00 5.24
346 347 6.144886 TCAATGTATTGATCGGTACATAACGC 59.855 38.462 17.89 0.00 41.51 4.84
347 348 7.381408 ACTCAATGTATTGATCGGTACATAACG 59.619 37.037 17.89 12.88 44.92 3.18
348 349 8.589335 ACTCAATGTATTGATCGGTACATAAC 57.411 34.615 17.89 0.00 44.92 1.89
349 350 9.040939 CAACTCAATGTATTGATCGGTACATAA 57.959 33.333 17.89 11.32 44.92 1.90
350 351 7.170828 GCAACTCAATGTATTGATCGGTACATA 59.829 37.037 17.89 7.49 44.92 2.29
351 352 6.017934 GCAACTCAATGTATTGATCGGTACAT 60.018 38.462 13.92 13.92 44.92 2.29
352 353 5.293324 GCAACTCAATGTATTGATCGGTACA 59.707 40.000 7.67 11.10 44.92 2.90
353 354 5.293324 TGCAACTCAATGTATTGATCGGTAC 59.707 40.000 7.67 1.49 44.92 3.34
354 355 5.423886 TGCAACTCAATGTATTGATCGGTA 58.576 37.500 7.67 0.00 44.92 4.02
355 356 4.260985 TGCAACTCAATGTATTGATCGGT 58.739 39.130 7.67 0.89 44.92 4.69
356 357 4.880886 TGCAACTCAATGTATTGATCGG 57.119 40.909 7.67 0.33 44.92 4.18
357 358 5.172591 GCAATGCAACTCAATGTATTGATCG 59.827 40.000 18.13 0.96 44.92 3.69
358 359 5.461078 GGCAATGCAACTCAATGTATTGATC 59.539 40.000 18.13 8.40 44.92 2.92
359 360 5.105269 TGGCAATGCAACTCAATGTATTGAT 60.105 36.000 18.13 0.00 44.92 2.57
360 361 4.220163 TGGCAATGCAACTCAATGTATTGA 59.780 37.500 18.13 7.06 43.94 2.57
361 362 4.496360 TGGCAATGCAACTCAATGTATTG 58.504 39.130 7.79 11.98 39.76 1.90
362 363 4.804868 TGGCAATGCAACTCAATGTATT 57.195 36.364 7.79 0.00 36.26 1.89
363 364 4.804868 TTGGCAATGCAACTCAATGTAT 57.195 36.364 7.79 0.00 0.00 2.29
364 365 4.558178 CTTTGGCAATGCAACTCAATGTA 58.442 39.130 7.79 0.00 0.00 2.29
365 366 3.395639 CTTTGGCAATGCAACTCAATGT 58.604 40.909 7.79 0.00 0.00 2.71
366 367 2.158841 GCTTTGGCAATGCAACTCAATG 59.841 45.455 27.26 5.62 38.54 2.82
367 368 2.224329 TGCTTTGGCAATGCAACTCAAT 60.224 40.909 31.04 0.00 46.36 2.57
368 369 1.138464 TGCTTTGGCAATGCAACTCAA 59.862 42.857 31.04 12.60 46.36 3.02
369 370 0.751452 TGCTTTGGCAATGCAACTCA 59.249 45.000 31.04 13.24 46.36 3.41
370 371 3.591979 TGCTTTGGCAATGCAACTC 57.408 47.368 31.04 8.99 46.36 3.01
380 381 3.665745 TTTGGAAGAGAATGCTTTGGC 57.334 42.857 0.00 0.00 39.26 4.52
381 382 6.367969 CAGATTTTTGGAAGAGAATGCTTTGG 59.632 38.462 0.00 0.00 0.00 3.28
382 383 7.149973 TCAGATTTTTGGAAGAGAATGCTTTG 58.850 34.615 0.00 0.00 0.00 2.77
383 384 7.294017 TCAGATTTTTGGAAGAGAATGCTTT 57.706 32.000 0.00 0.00 0.00 3.51
384 385 6.906157 TCAGATTTTTGGAAGAGAATGCTT 57.094 33.333 0.00 0.00 0.00 3.91
385 386 6.906157 TTCAGATTTTTGGAAGAGAATGCT 57.094 33.333 0.00 0.00 0.00 3.79
386 387 7.521509 CATTCAGATTTTTGGAAGAGAATGC 57.478 36.000 0.00 0.00 36.04 3.56
387 388 7.321153 AGCATTCAGATTTTTGGAAGAGAATG 58.679 34.615 0.00 0.00 42.23 2.67
388 389 7.396623 AGAGCATTCAGATTTTTGGAAGAGAAT 59.603 33.333 0.00 0.00 0.00 2.40
389 390 6.718454 AGAGCATTCAGATTTTTGGAAGAGAA 59.282 34.615 0.00 0.00 0.00 2.87
390 391 6.243900 AGAGCATTCAGATTTTTGGAAGAGA 58.756 36.000 0.00 0.00 0.00 3.10
391 392 6.512342 AGAGCATTCAGATTTTTGGAAGAG 57.488 37.500 0.00 0.00 0.00 2.85
392 393 6.906157 AAGAGCATTCAGATTTTTGGAAGA 57.094 33.333 0.00 0.00 0.00 2.87
403 404 9.261180 CCGTAAAGAAATATAAGAGCATTCAGA 57.739 33.333 0.00 0.00 0.00 3.27
404 405 9.261180 TCCGTAAAGAAATATAAGAGCATTCAG 57.739 33.333 0.00 0.00 0.00 3.02
405 406 9.261180 CTCCGTAAAGAAATATAAGAGCATTCA 57.739 33.333 0.00 0.00 0.00 2.57
406 407 8.713271 CCTCCGTAAAGAAATATAAGAGCATTC 58.287 37.037 0.00 0.00 0.00 2.67
407 408 7.661847 CCCTCCGTAAAGAAATATAAGAGCATT 59.338 37.037 0.00 0.00 0.00 3.56
408 409 7.016268 TCCCTCCGTAAAGAAATATAAGAGCAT 59.984 37.037 0.00 0.00 0.00 3.79
409 410 6.325545 TCCCTCCGTAAAGAAATATAAGAGCA 59.674 38.462 0.00 0.00 0.00 4.26
410 411 6.756221 TCCCTCCGTAAAGAAATATAAGAGC 58.244 40.000 0.00 0.00 0.00 4.09
411 412 6.869388 GCTCCCTCCGTAAAGAAATATAAGAG 59.131 42.308 0.00 0.00 0.00 2.85
412 413 6.325545 TGCTCCCTCCGTAAAGAAATATAAGA 59.674 38.462 0.00 0.00 0.00 2.10
413 414 6.522054 TGCTCCCTCCGTAAAGAAATATAAG 58.478 40.000 0.00 0.00 0.00 1.73
414 415 6.488769 TGCTCCCTCCGTAAAGAAATATAA 57.511 37.500 0.00 0.00 0.00 0.98
415 416 6.099269 ACTTGCTCCCTCCGTAAAGAAATATA 59.901 38.462 0.00 0.00 0.00 0.86
416 417 5.104485 ACTTGCTCCCTCCGTAAAGAAATAT 60.104 40.000 0.00 0.00 0.00 1.28
417 418 4.224370 ACTTGCTCCCTCCGTAAAGAAATA 59.776 41.667 0.00 0.00 0.00 1.40
418 419 3.009143 ACTTGCTCCCTCCGTAAAGAAAT 59.991 43.478 0.00 0.00 0.00 2.17
419 420 2.370849 ACTTGCTCCCTCCGTAAAGAAA 59.629 45.455 0.00 0.00 0.00 2.52
420 421 1.975680 ACTTGCTCCCTCCGTAAAGAA 59.024 47.619 0.00 0.00 0.00 2.52
421 422 1.640917 ACTTGCTCCCTCCGTAAAGA 58.359 50.000 0.00 0.00 0.00 2.52
422 423 3.821421 ATACTTGCTCCCTCCGTAAAG 57.179 47.619 0.00 0.00 0.00 1.85
423 424 4.258543 CAAATACTTGCTCCCTCCGTAAA 58.741 43.478 0.00 0.00 0.00 2.01
424 425 3.262405 ACAAATACTTGCTCCCTCCGTAA 59.738 43.478 0.00 0.00 35.84 3.18
425 426 2.835764 ACAAATACTTGCTCCCTCCGTA 59.164 45.455 0.00 0.00 35.84 4.02
426 427 1.628846 ACAAATACTTGCTCCCTCCGT 59.371 47.619 0.00 0.00 35.84 4.69
427 428 2.403252 ACAAATACTTGCTCCCTCCG 57.597 50.000 0.00 0.00 35.84 4.63
428 429 5.437060 TCATTACAAATACTTGCTCCCTCC 58.563 41.667 0.00 0.00 35.84 4.30
429 430 7.094377 TGTTTCATTACAAATACTTGCTCCCTC 60.094 37.037 0.00 0.00 35.84 4.30
430 431 6.719370 TGTTTCATTACAAATACTTGCTCCCT 59.281 34.615 0.00 0.00 35.84 4.20
431 432 6.919721 TGTTTCATTACAAATACTTGCTCCC 58.080 36.000 0.00 0.00 35.84 4.30
432 433 8.810652 TTTGTTTCATTACAAATACTTGCTCC 57.189 30.769 0.00 0.00 41.65 4.70
435 436 9.862585 CCTTTTTGTTTCATTACAAATACTTGC 57.137 29.630 0.00 0.00 44.76 4.01
885 886 1.691127 CGTATATCTGCTGGAGTGCG 58.309 55.000 0.00 0.00 35.36 5.34
910 911 2.558378 GCTAGGGTTTATTGACGGGAC 58.442 52.381 0.00 0.00 0.00 4.46
1141 1149 2.137523 GTCGCTTTTGGAGTTAACCGA 58.862 47.619 0.88 0.00 0.00 4.69
1143 1151 1.196127 CGGTCGCTTTTGGAGTTAACC 59.804 52.381 0.88 0.00 0.00 2.85
1144 1152 2.137523 TCGGTCGCTTTTGGAGTTAAC 58.862 47.619 0.00 0.00 0.00 2.01
1145 1153 2.529780 TCGGTCGCTTTTGGAGTTAA 57.470 45.000 0.00 0.00 0.00 2.01
1148 1156 2.167693 TGATATCGGTCGCTTTTGGAGT 59.832 45.455 0.00 0.00 0.00 3.85
1150 1158 2.429250 TCTGATATCGGTCGCTTTTGGA 59.571 45.455 11.35 0.00 0.00 3.53
1248 1256 1.299976 GAGGTTGAACGCTGGGGAT 59.700 57.895 0.00 0.00 0.00 3.85
1251 1259 2.317609 CGTGAGGTTGAACGCTGGG 61.318 63.158 0.00 0.00 32.40 4.45
1815 1928 7.355332 TGAAAGCTGTATAAAGTTTCGGTAC 57.645 36.000 0.00 0.00 31.10 3.34
1833 1948 1.610522 ACACCAGCATGTCTTGAAAGC 59.389 47.619 0.00 0.00 0.00 3.51
1865 1980 1.202188 TGCGATGCACGTTGTTTTCAA 60.202 42.857 9.76 0.00 44.60 2.69
1890 2005 4.096681 TGATAGGGGTGAGCATATGTAGG 58.903 47.826 4.29 0.00 0.00 3.18
1892 2007 4.021456 CGTTGATAGGGGTGAGCATATGTA 60.021 45.833 4.29 0.00 0.00 2.29
1894 2009 3.244215 ACGTTGATAGGGGTGAGCATATG 60.244 47.826 0.00 0.00 0.00 1.78
1899 2014 1.535437 CGTACGTTGATAGGGGTGAGC 60.535 57.143 7.22 0.00 0.00 4.26
1914 2029 2.816087 AGGTAGGGTATATGTGCGTACG 59.184 50.000 11.84 11.84 0.00 3.67
1918 2033 4.948004 TCATAGAGGTAGGGTATATGTGCG 59.052 45.833 0.00 0.00 0.00 5.34
1924 2039 5.862422 AGTGCTCATAGAGGTAGGGTATA 57.138 43.478 0.00 0.00 0.00 1.47
1929 2044 6.007076 TCTATCAAGTGCTCATAGAGGTAGG 58.993 44.000 0.00 0.00 0.00 3.18
1930 2045 7.517614 TTCTATCAAGTGCTCATAGAGGTAG 57.482 40.000 0.00 0.00 32.09 3.18
1940 2055 7.608308 AAGAAGATGTTTCTATCAAGTGCTC 57.392 36.000 0.00 0.00 0.00 4.26
1952 2067 7.643764 TGTTCGTTCAATGAAAGAAGATGTTTC 59.356 33.333 21.17 10.57 39.71 2.78
1998 2113 5.535030 GGTTCCTTGTGGTTAGACTGAATTT 59.465 40.000 0.00 0.00 34.23 1.82
2044 2159 1.154150 GACAAGCATGCCAGCGAAC 60.154 57.895 15.66 0.00 40.15 3.95
2105 2220 8.034215 TGCATCATTTAGAAAAACACTTATGGG 58.966 33.333 0.00 0.00 0.00 4.00
2147 2262 9.622004 CTAGTCGACACTACTTTCTTAATGAAA 57.378 33.333 19.50 0.00 36.91 2.69
2148 2263 8.790718 ACTAGTCGACACTACTTTCTTAATGAA 58.209 33.333 19.50 0.00 33.62 2.57
2149 2264 8.332996 ACTAGTCGACACTACTTTCTTAATGA 57.667 34.615 19.50 0.00 33.62 2.57
2200 2315 3.338249 CCTAATCAGCGGGTTATGATGG 58.662 50.000 0.00 0.00 36.31 3.51
2205 2320 1.488812 TGTGCCTAATCAGCGGGTTAT 59.511 47.619 0.00 0.00 0.00 1.89
2228 2343 3.072330 TGTGTGGTATTGTGATGTCCTGT 59.928 43.478 0.00 0.00 0.00 4.00
2229 2344 3.436704 GTGTGTGGTATTGTGATGTCCTG 59.563 47.826 0.00 0.00 0.00 3.86
2250 2365 6.434965 TGGTGATGTTTTCTTCATGATGATGT 59.565 34.615 11.72 0.00 36.59 3.06
2256 2371 4.892345 TGGTTGGTGATGTTTTCTTCATGA 59.108 37.500 0.00 0.00 36.59 3.07
2299 2414 2.351738 GGATTTTTGTGTGGCTTCTCGG 60.352 50.000 0.00 0.00 0.00 4.63
2317 2432 1.956477 GGTTAATCGCTTGGCATGGAT 59.044 47.619 2.33 1.31 0.00 3.41
2322 2437 0.878416 GTGTGGTTAATCGCTTGGCA 59.122 50.000 0.23 0.00 0.00 4.92
2323 2438 0.878416 TGTGTGGTTAATCGCTTGGC 59.122 50.000 0.23 0.00 0.00 4.52
2324 2439 1.876799 TGTGTGTGGTTAATCGCTTGG 59.123 47.619 0.23 0.00 0.00 3.61
2325 2440 2.350388 GGTGTGTGTGGTTAATCGCTTG 60.350 50.000 0.23 0.00 0.00 4.01
2326 2441 1.877443 GGTGTGTGTGGTTAATCGCTT 59.123 47.619 0.23 0.00 0.00 4.68
2327 2442 1.519408 GGTGTGTGTGGTTAATCGCT 58.481 50.000 0.23 0.00 0.00 4.93
2328 2443 0.165079 CGGTGTGTGTGGTTAATCGC 59.835 55.000 0.00 0.00 0.00 4.58
2491 2614 5.104941 TGGTAGTCAACAAGGTCATCATAGG 60.105 44.000 0.00 0.00 0.00 2.57
2546 2669 2.105006 AGTCTGGCAACTGCTATGTG 57.895 50.000 1.06 0.00 41.70 3.21
2547 2670 2.419297 GCTAGTCTGGCAACTGCTATGT 60.419 50.000 2.85 0.00 41.70 2.29
2548 2671 2.208431 GCTAGTCTGGCAACTGCTATG 58.792 52.381 2.85 0.00 41.70 2.23
2549 2672 1.139853 GGCTAGTCTGGCAACTGCTAT 59.860 52.381 10.66 0.00 41.70 2.97
2550 2673 0.537188 GGCTAGTCTGGCAACTGCTA 59.463 55.000 10.66 0.00 41.70 3.49
2551 2674 1.298014 GGCTAGTCTGGCAACTGCT 59.702 57.895 10.66 0.24 41.70 4.24
2552 2675 1.003355 TGGCTAGTCTGGCAACTGC 60.003 57.895 10.66 11.40 39.58 4.40
2553 2676 0.674895 GGTGGCTAGTCTGGCAACTG 60.675 60.000 14.76 4.67 45.25 3.16
2554 2677 1.679898 GGTGGCTAGTCTGGCAACT 59.320 57.895 14.76 7.34 45.25 3.16
2555 2678 4.303257 GGTGGCTAGTCTGGCAAC 57.697 61.111 10.66 8.90 44.02 4.17
2556 2679 0.250727 GTTGGTGGCTAGTCTGGCAA 60.251 55.000 10.66 0.00 44.02 4.52
2557 2680 1.374947 GTTGGTGGCTAGTCTGGCA 59.625 57.895 10.66 2.72 40.25 4.92
2558 2681 1.741770 CGTTGGTGGCTAGTCTGGC 60.742 63.158 0.00 0.00 0.00 4.85
2559 2682 0.389948 GTCGTTGGTGGCTAGTCTGG 60.390 60.000 0.00 0.00 0.00 3.86
2560 2683 0.389948 GGTCGTTGGTGGCTAGTCTG 60.390 60.000 0.00 0.00 0.00 3.51
2561 2684 0.830444 TGGTCGTTGGTGGCTAGTCT 60.830 55.000 0.00 0.00 0.00 3.24
2562 2685 0.669625 GTGGTCGTTGGTGGCTAGTC 60.670 60.000 0.00 0.00 0.00 2.59
2563 2686 1.370064 GTGGTCGTTGGTGGCTAGT 59.630 57.895 0.00 0.00 0.00 2.57
2564 2687 1.375523 GGTGGTCGTTGGTGGCTAG 60.376 63.158 0.00 0.00 0.00 3.42
2565 2688 2.745037 GGTGGTCGTTGGTGGCTA 59.255 61.111 0.00 0.00 0.00 3.93
2566 2689 4.619227 CGGTGGTCGTTGGTGGCT 62.619 66.667 0.00 0.00 0.00 4.75
2568 2691 3.229156 TAGCGGTGGTCGTTGGTGG 62.229 63.158 0.00 0.00 41.72 4.61
2569 2692 2.025418 GTAGCGGTGGTCGTTGGTG 61.025 63.158 0.00 0.00 41.72 4.17
2570 2693 2.341176 GTAGCGGTGGTCGTTGGT 59.659 61.111 0.00 0.00 41.72 3.67
2571 2694 2.433664 GGTAGCGGTGGTCGTTGG 60.434 66.667 0.00 0.00 41.72 3.77
2572 2695 1.301087 TTGGTAGCGGTGGTCGTTG 60.301 57.895 0.00 0.00 41.72 4.10
2573 2696 1.301165 GTTGGTAGCGGTGGTCGTT 60.301 57.895 0.00 0.00 41.72 3.85
2574 2697 2.341176 GTTGGTAGCGGTGGTCGT 59.659 61.111 0.00 0.00 41.72 4.34
2575 2698 2.433664 GGTTGGTAGCGGTGGTCG 60.434 66.667 0.00 0.00 42.76 4.79
2576 2699 1.670083 GTGGTTGGTAGCGGTGGTC 60.670 63.158 0.00 0.00 0.00 4.02
2577 2700 2.428622 GTGGTTGGTAGCGGTGGT 59.571 61.111 0.00 0.00 0.00 4.16
2578 2701 2.740826 CGTGGTTGGTAGCGGTGG 60.741 66.667 0.00 0.00 0.00 4.61
2579 2702 2.740826 CCGTGGTTGGTAGCGGTG 60.741 66.667 0.00 0.00 39.41 4.94
2580 2703 4.011517 CCCGTGGTTGGTAGCGGT 62.012 66.667 0.00 0.00 42.36 5.68
2581 2704 3.540367 AACCCGTGGTTGGTAGCGG 62.540 63.158 7.42 0.00 45.07 5.52
2582 2705 2.030958 GAACCCGTGGTTGGTAGCG 61.031 63.158 12.31 0.00 46.95 4.26
2583 2706 1.673337 GGAACCCGTGGTTGGTAGC 60.673 63.158 12.31 0.00 46.95 3.58
2584 2707 0.036671 GAGGAACCCGTGGTTGGTAG 60.037 60.000 12.31 0.00 46.95 3.18
2585 2708 1.482748 GGAGGAACCCGTGGTTGGTA 61.483 60.000 12.31 0.00 46.95 3.25
2586 2709 2.826003 GGAGGAACCCGTGGTTGGT 61.826 63.158 12.31 0.00 46.95 3.67
2587 2710 2.033602 GGAGGAACCCGTGGTTGG 59.966 66.667 12.31 0.00 46.95 3.77
2588 2711 1.149627 TTGGAGGAACCCGTGGTTG 59.850 57.895 12.31 0.00 46.95 3.77
2590 2713 2.833957 GTTGGAGGAACCCGTGGT 59.166 61.111 0.00 0.00 37.65 4.16
2602 2725 0.397187 TGGAATTCGTTCCGGTTGGA 59.603 50.000 0.00 0.00 44.02 3.53
2603 2726 0.802494 CTGGAATTCGTTCCGGTTGG 59.198 55.000 0.00 0.00 44.02 3.77
2604 2727 1.803334 TCTGGAATTCGTTCCGGTTG 58.197 50.000 13.98 0.00 45.56 3.77
2605 2728 2.148768 GTTCTGGAATTCGTTCCGGTT 58.851 47.619 13.98 0.00 45.56 4.44
2606 2729 1.804601 GTTCTGGAATTCGTTCCGGT 58.195 50.000 13.98 0.00 45.56 5.28
2607 2730 0.719465 CGTTCTGGAATTCGTTCCGG 59.281 55.000 9.28 9.28 46.50 5.14
2608 2731 0.719465 CCGTTCTGGAATTCGTTCCG 59.281 55.000 0.00 0.00 44.02 4.30
2609 2732 1.804601 ACCGTTCTGGAATTCGTTCC 58.195 50.000 0.00 0.28 42.00 3.62
2610 2733 3.582780 AGTACCGTTCTGGAATTCGTTC 58.417 45.455 0.00 0.00 42.00 3.95
2611 2734 3.582780 GAGTACCGTTCTGGAATTCGTT 58.417 45.455 0.00 0.00 42.00 3.85
2612 2735 2.094338 GGAGTACCGTTCTGGAATTCGT 60.094 50.000 0.00 0.00 42.00 3.85
2613 2736 2.537401 GGAGTACCGTTCTGGAATTCG 58.463 52.381 0.00 0.00 42.00 3.34
2614 2737 2.419713 GGGGAGTACCGTTCTGGAATTC 60.420 54.545 0.00 0.00 42.00 2.17
2615 2738 1.558294 GGGGAGTACCGTTCTGGAATT 59.442 52.381 0.00 0.00 42.00 2.17
2616 2739 1.201424 GGGGAGTACCGTTCTGGAAT 58.799 55.000 0.00 0.00 42.00 3.01
2617 2740 0.178926 TGGGGAGTACCGTTCTGGAA 60.179 55.000 0.00 0.00 42.00 3.53
2618 2741 0.178926 TTGGGGAGTACCGTTCTGGA 60.179 55.000 0.00 0.00 42.00 3.86
2619 2742 0.036671 GTTGGGGAGTACCGTTCTGG 60.037 60.000 0.00 0.00 46.41 3.86
2620 2743 0.682852 TGTTGGGGAGTACCGTTCTG 59.317 55.000 0.00 0.00 41.60 3.02
2621 2744 1.346722 CTTGTTGGGGAGTACCGTTCT 59.653 52.381 0.00 0.00 41.60 3.01
2622 2745 1.804601 CTTGTTGGGGAGTACCGTTC 58.195 55.000 0.00 0.00 41.60 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.