Multiple sequence alignment - TraesCS2D01G376600
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2D01G376600 | chr2D | 100.000 | 4398 | 0 | 0 | 1 | 4398 | 480779677 | 480775280 | 0.000000e+00 | 8122.0 |
1 | TraesCS2D01G376600 | chr2B | 92.194 | 3254 | 112 | 51 | 445 | 3655 | 563924646 | 563921492 | 0.000000e+00 | 4471.0 |
2 | TraesCS2D01G376600 | chr2B | 87.061 | 456 | 22 | 8 | 3955 | 4398 | 563921469 | 563921039 | 8.560000e-132 | 481.0 |
3 | TraesCS2D01G376600 | chr2A | 91.050 | 3352 | 139 | 66 | 393 | 3680 | 623565347 | 623562093 | 0.000000e+00 | 4379.0 |
4 | TraesCS2D01G376600 | chr2A | 85.256 | 624 | 51 | 24 | 3796 | 4398 | 623562031 | 623561428 | 4.870000e-169 | 604.0 |
5 | TraesCS2D01G376600 | chr6D | 79.826 | 1036 | 160 | 36 | 1075 | 2085 | 301268285 | 301269296 | 0.000000e+00 | 710.0 |
6 | TraesCS2D01G376600 | chr6A | 79.807 | 1035 | 162 | 36 | 1075 | 2085 | 415907623 | 415906612 | 0.000000e+00 | 710.0 |
7 | TraesCS2D01G376600 | chr6B | 79.110 | 1034 | 171 | 32 | 1075 | 2085 | 466695836 | 466696847 | 0.000000e+00 | 671.0 |
8 | TraesCS2D01G376600 | chr7A | 80.792 | 682 | 94 | 27 | 1034 | 1696 | 641581334 | 641580671 | 2.360000e-137 | 499.0 |
9 | TraesCS2D01G376600 | chr7A | 91.810 | 232 | 18 | 1 | 2 | 233 | 679794495 | 679794265 | 5.490000e-84 | 322.0 |
10 | TraesCS2D01G376600 | chr7A | 83.190 | 232 | 38 | 1 | 2 | 233 | 14049740 | 14049970 | 1.240000e-50 | 211.0 |
11 | TraesCS2D01G376600 | chr7D | 79.911 | 677 | 100 | 21 | 1034 | 1696 | 556120932 | 556121586 | 8.620000e-127 | 464.0 |
12 | TraesCS2D01G376600 | chr7D | 97.468 | 79 | 2 | 0 | 2261 | 2339 | 598763069 | 598763147 | 7.670000e-28 | 135.0 |
13 | TraesCS2D01G376600 | chr1D | 80.583 | 515 | 87 | 10 | 1199 | 1709 | 217143175 | 217143680 | 6.900000e-103 | 385.0 |
14 | TraesCS2D01G376600 | chr1B | 81.513 | 476 | 77 | 11 | 1241 | 1709 | 310927302 | 310927773 | 8.930000e-102 | 381.0 |
15 | TraesCS2D01G376600 | chr1A | 80.388 | 515 | 88 | 10 | 1199 | 1709 | 278142079 | 278142584 | 3.210000e-101 | 379.0 |
16 | TraesCS2D01G376600 | chr5A | 94.850 | 233 | 11 | 1 | 1 | 233 | 366710838 | 366711069 | 3.230000e-96 | 363.0 |
17 | TraesCS2D01G376600 | chr5A | 92.275 | 233 | 17 | 1 | 1 | 233 | 451129716 | 451129947 | 3.280000e-86 | 329.0 |
18 | TraesCS2D01G376600 | chr3A | 90.558 | 233 | 21 | 1 | 1 | 233 | 25559121 | 25558890 | 1.540000e-79 | 307.0 |
19 | TraesCS2D01G376600 | chr5D | 96.341 | 82 | 3 | 0 | 2261 | 2342 | 446044757 | 446044676 | 7.670000e-28 | 135.0 |
20 | TraesCS2D01G376600 | chr4D | 82.292 | 96 | 16 | 1 | 255 | 350 | 282238260 | 282238166 | 1.010000e-11 | 82.4 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2D01G376600 | chr2D | 480775280 | 480779677 | 4397 | True | 8122.0 | 8122 | 100.0000 | 1 | 4398 | 1 | chr2D.!!$R1 | 4397 |
1 | TraesCS2D01G376600 | chr2B | 563921039 | 563924646 | 3607 | True | 2476.0 | 4471 | 89.6275 | 445 | 4398 | 2 | chr2B.!!$R1 | 3953 |
2 | TraesCS2D01G376600 | chr2A | 623561428 | 623565347 | 3919 | True | 2491.5 | 4379 | 88.1530 | 393 | 4398 | 2 | chr2A.!!$R1 | 4005 |
3 | TraesCS2D01G376600 | chr6D | 301268285 | 301269296 | 1011 | False | 710.0 | 710 | 79.8260 | 1075 | 2085 | 1 | chr6D.!!$F1 | 1010 |
4 | TraesCS2D01G376600 | chr6A | 415906612 | 415907623 | 1011 | True | 710.0 | 710 | 79.8070 | 1075 | 2085 | 1 | chr6A.!!$R1 | 1010 |
5 | TraesCS2D01G376600 | chr6B | 466695836 | 466696847 | 1011 | False | 671.0 | 671 | 79.1100 | 1075 | 2085 | 1 | chr6B.!!$F1 | 1010 |
6 | TraesCS2D01G376600 | chr7A | 641580671 | 641581334 | 663 | True | 499.0 | 499 | 80.7920 | 1034 | 1696 | 1 | chr7A.!!$R1 | 662 |
7 | TraesCS2D01G376600 | chr7D | 556120932 | 556121586 | 654 | False | 464.0 | 464 | 79.9110 | 1034 | 1696 | 1 | chr7D.!!$F1 | 662 |
8 | TraesCS2D01G376600 | chr1D | 217143175 | 217143680 | 505 | False | 385.0 | 385 | 80.5830 | 1199 | 1709 | 1 | chr1D.!!$F1 | 510 |
9 | TraesCS2D01G376600 | chr1A | 278142079 | 278142584 | 505 | False | 379.0 | 379 | 80.3880 | 1199 | 1709 | 1 | chr1A.!!$F1 | 510 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
245 | 246 | 0.103026 | CCGGATCGATCTGCTTGTGA | 59.897 | 55.000 | 25.97 | 0.0 | 31.76 | 3.58 | F |
765 | 795 | 0.319040 | CAGCGATTCGATGGACGGAT | 60.319 | 55.000 | 16.15 | 0.0 | 43.57 | 4.18 | F |
766 | 796 | 0.319040 | AGCGATTCGATGGACGGATG | 60.319 | 55.000 | 10.88 | 0.0 | 40.66 | 3.51 | F |
950 | 1004 | 0.458543 | CTTGGTCTCACCGTCCATCG | 60.459 | 60.000 | 0.00 | 0.0 | 42.58 | 3.84 | F |
2140 | 2241 | 1.067821 | GGACTAGCTTCCAGACCATCG | 59.932 | 57.143 | 0.00 | 0.0 | 35.49 | 3.84 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1593 | 1675 | 1.202758 | TGGTTCACGAAGTTGCTCCAT | 60.203 | 47.619 | 0.00 | 0.00 | 41.61 | 3.41 | R |
2140 | 2241 | 1.896220 | TTGAGAGTTGCCATGTGGTC | 58.104 | 50.000 | 0.35 | 0.00 | 37.57 | 4.02 | R |
2301 | 2412 | 2.359850 | TTGGGCATGCTCGACACC | 60.360 | 61.111 | 18.92 | 9.61 | 0.00 | 4.16 | R |
2434 | 2545 | 2.747460 | CTGATGGTGGTGGCCGTG | 60.747 | 66.667 | 0.00 | 0.00 | 0.00 | 4.94 | R |
3792 | 3922 | 0.178921 | TGAGCTTGTCCCTCTGGTCT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
17 | 18 | 2.573340 | CGCCCTTGCCCAAATCAC | 59.427 | 61.111 | 0.00 | 0.00 | 0.00 | 3.06 |
18 | 19 | 2.573340 | GCCCTTGCCCAAATCACG | 59.427 | 61.111 | 0.00 | 0.00 | 0.00 | 4.35 |
19 | 20 | 1.976474 | GCCCTTGCCCAAATCACGA | 60.976 | 57.895 | 0.00 | 0.00 | 0.00 | 4.35 |
20 | 21 | 1.531739 | GCCCTTGCCCAAATCACGAA | 61.532 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
21 | 22 | 0.243636 | CCCTTGCCCAAATCACGAAC | 59.756 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
22 | 23 | 1.247567 | CCTTGCCCAAATCACGAACT | 58.752 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
23 | 24 | 1.200020 | CCTTGCCCAAATCACGAACTC | 59.800 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
24 | 25 | 1.200020 | CTTGCCCAAATCACGAACTCC | 59.800 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
25 | 26 | 0.953471 | TGCCCAAATCACGAACTCCG | 60.953 | 55.000 | 0.00 | 0.00 | 45.44 | 4.63 |
26 | 27 | 0.672401 | GCCCAAATCACGAACTCCGA | 60.672 | 55.000 | 0.00 | 0.00 | 41.76 | 4.55 |
27 | 28 | 1.076332 | CCCAAATCACGAACTCCGAC | 58.924 | 55.000 | 0.00 | 0.00 | 41.76 | 4.79 |
28 | 29 | 0.713883 | CCAAATCACGAACTCCGACG | 59.286 | 55.000 | 0.00 | 0.00 | 41.76 | 5.12 |
29 | 30 | 0.713883 | CAAATCACGAACTCCGACGG | 59.286 | 55.000 | 7.84 | 7.84 | 41.76 | 4.79 |
30 | 31 | 1.012486 | AAATCACGAACTCCGACGGC | 61.012 | 55.000 | 9.66 | 0.00 | 41.76 | 5.68 |
31 | 32 | 3.678717 | ATCACGAACTCCGACGGCG | 62.679 | 63.158 | 9.66 | 1.94 | 41.76 | 6.46 |
50 | 51 | 2.203070 | CGAGAGCGGAAATGGGGG | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 5.40 |
51 | 52 | 2.517166 | GAGAGCGGAAATGGGGGC | 60.517 | 66.667 | 0.00 | 0.00 | 0.00 | 5.80 |
52 | 53 | 3.338250 | AGAGCGGAAATGGGGGCA | 61.338 | 61.111 | 0.00 | 0.00 | 0.00 | 5.36 |
53 | 54 | 2.123726 | GAGCGGAAATGGGGGCAT | 60.124 | 61.111 | 0.00 | 0.00 | 0.00 | 4.40 |
54 | 55 | 2.123726 | AGCGGAAATGGGGGCATC | 60.124 | 61.111 | 0.00 | 0.00 | 0.00 | 3.91 |
55 | 56 | 3.226537 | GCGGAAATGGGGGCATCC | 61.227 | 66.667 | 0.00 | 0.00 | 0.00 | 3.51 |
56 | 57 | 2.603008 | CGGAAATGGGGGCATCCT | 59.397 | 61.111 | 0.00 | 0.00 | 35.33 | 3.24 |
57 | 58 | 1.076044 | CGGAAATGGGGGCATCCTT | 60.076 | 57.895 | 0.00 | 0.00 | 35.33 | 3.36 |
58 | 59 | 1.394266 | CGGAAATGGGGGCATCCTTG | 61.394 | 60.000 | 0.00 | 0.00 | 35.33 | 3.61 |
65 | 66 | 4.874528 | GGGCATCCTTGCTCTCTC | 57.125 | 61.111 | 0.00 | 0.00 | 46.44 | 3.20 |
66 | 67 | 1.148048 | GGGCATCCTTGCTCTCTCC | 59.852 | 63.158 | 0.00 | 0.00 | 46.44 | 3.71 |
67 | 68 | 1.344191 | GGGCATCCTTGCTCTCTCCT | 61.344 | 60.000 | 0.00 | 0.00 | 46.44 | 3.69 |
68 | 69 | 3.254112 | GGGCATCCTTGCTCTCTCCTC | 62.254 | 61.905 | 0.00 | 0.00 | 46.44 | 3.71 |
69 | 70 | 0.106521 | GCATCCTTGCTCTCTCCTCC | 59.893 | 60.000 | 0.00 | 0.00 | 45.77 | 4.30 |
70 | 71 | 1.493861 | CATCCTTGCTCTCTCCTCCA | 58.506 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
71 | 72 | 1.413445 | CATCCTTGCTCTCTCCTCCAG | 59.587 | 57.143 | 0.00 | 0.00 | 0.00 | 3.86 |
72 | 73 | 0.975040 | TCCTTGCTCTCTCCTCCAGC | 60.975 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
73 | 74 | 1.141449 | CTTGCTCTCTCCTCCAGCG | 59.859 | 63.158 | 0.00 | 0.00 | 35.81 | 5.18 |
74 | 75 | 1.603236 | CTTGCTCTCTCCTCCAGCGT | 61.603 | 60.000 | 0.00 | 0.00 | 35.81 | 5.07 |
75 | 76 | 1.881903 | TTGCTCTCTCCTCCAGCGTG | 61.882 | 60.000 | 0.00 | 0.00 | 35.81 | 5.34 |
76 | 77 | 3.074999 | GCTCTCTCCTCCAGCGTGG | 62.075 | 68.421 | 0.00 | 0.00 | 39.43 | 4.94 |
77 | 78 | 3.071206 | TCTCTCCTCCAGCGTGGC | 61.071 | 66.667 | 0.00 | 0.00 | 37.47 | 5.01 |
78 | 79 | 4.154347 | CTCTCCTCCAGCGTGGCC | 62.154 | 72.222 | 0.00 | 0.00 | 37.47 | 5.36 |
79 | 80 | 4.704103 | TCTCCTCCAGCGTGGCCT | 62.704 | 66.667 | 3.32 | 0.00 | 37.47 | 5.19 |
80 | 81 | 4.154347 | CTCCTCCAGCGTGGCCTC | 62.154 | 72.222 | 3.32 | 0.00 | 37.47 | 4.70 |
81 | 82 | 4.704103 | TCCTCCAGCGTGGCCTCT | 62.704 | 66.667 | 3.32 | 0.00 | 37.47 | 3.69 |
82 | 83 | 3.710722 | CCTCCAGCGTGGCCTCTT | 61.711 | 66.667 | 3.32 | 0.00 | 37.47 | 2.85 |
83 | 84 | 2.125350 | CTCCAGCGTGGCCTCTTC | 60.125 | 66.667 | 3.32 | 0.00 | 37.47 | 2.87 |
84 | 85 | 3.997064 | CTCCAGCGTGGCCTCTTCG | 62.997 | 68.421 | 3.32 | 5.05 | 37.47 | 3.79 |
85 | 86 | 4.069232 | CCAGCGTGGCCTCTTCGA | 62.069 | 66.667 | 3.32 | 0.00 | 0.00 | 3.71 |
86 | 87 | 2.048222 | CAGCGTGGCCTCTTCGAA | 60.048 | 61.111 | 3.32 | 0.00 | 0.00 | 3.71 |
87 | 88 | 2.097038 | CAGCGTGGCCTCTTCGAAG | 61.097 | 63.158 | 19.35 | 19.35 | 0.00 | 3.79 |
88 | 89 | 2.261671 | GCGTGGCCTCTTCGAAGA | 59.738 | 61.111 | 25.57 | 25.57 | 0.00 | 2.87 |
89 | 90 | 1.153549 | GCGTGGCCTCTTCGAAGAT | 60.154 | 57.895 | 27.19 | 0.00 | 35.04 | 2.40 |
90 | 91 | 1.424493 | GCGTGGCCTCTTCGAAGATG | 61.424 | 60.000 | 27.19 | 24.28 | 35.04 | 2.90 |
91 | 92 | 1.424493 | CGTGGCCTCTTCGAAGATGC | 61.424 | 60.000 | 34.17 | 34.17 | 43.29 | 3.91 |
92 | 93 | 0.391661 | GTGGCCTCTTCGAAGATGCA | 60.392 | 55.000 | 38.56 | 27.74 | 45.03 | 3.96 |
93 | 94 | 0.391661 | TGGCCTCTTCGAAGATGCAC | 60.392 | 55.000 | 38.56 | 30.79 | 45.03 | 4.57 |
94 | 95 | 1.092345 | GGCCTCTTCGAAGATGCACC | 61.092 | 60.000 | 38.56 | 27.54 | 45.03 | 5.01 |
95 | 96 | 1.424493 | GCCTCTTCGAAGATGCACCG | 61.424 | 60.000 | 35.74 | 21.40 | 43.43 | 4.94 |
96 | 97 | 1.424493 | CCTCTTCGAAGATGCACCGC | 61.424 | 60.000 | 27.19 | 0.00 | 35.04 | 5.68 |
97 | 98 | 1.746727 | CTCTTCGAAGATGCACCGCG | 61.747 | 60.000 | 27.19 | 10.07 | 35.04 | 6.46 |
98 | 99 | 3.425938 | CTTCGAAGATGCACCGCGC | 62.426 | 63.158 | 20.74 | 0.00 | 42.89 | 6.86 |
101 | 102 | 3.869272 | GAAGATGCACCGCGCCAG | 61.869 | 66.667 | 0.00 | 0.00 | 41.33 | 4.85 |
112 | 113 | 4.774503 | GCGCCAGCTTCCTCTGCT | 62.775 | 66.667 | 0.00 | 0.00 | 42.06 | 4.24 |
113 | 114 | 2.511145 | CGCCAGCTTCCTCTGCTC | 60.511 | 66.667 | 0.00 | 0.00 | 38.92 | 4.26 |
114 | 115 | 2.124778 | GCCAGCTTCCTCTGCTCC | 60.125 | 66.667 | 0.00 | 0.00 | 38.92 | 4.70 |
115 | 116 | 2.964310 | GCCAGCTTCCTCTGCTCCA | 61.964 | 63.158 | 0.00 | 0.00 | 38.92 | 3.86 |
116 | 117 | 1.681666 | CCAGCTTCCTCTGCTCCAA | 59.318 | 57.895 | 0.00 | 0.00 | 38.92 | 3.53 |
117 | 118 | 0.392729 | CCAGCTTCCTCTGCTCCAAG | 60.393 | 60.000 | 0.00 | 0.00 | 38.92 | 3.61 |
118 | 119 | 0.324285 | CAGCTTCCTCTGCTCCAAGT | 59.676 | 55.000 | 0.00 | 0.00 | 38.92 | 3.16 |
119 | 120 | 0.612744 | AGCTTCCTCTGCTCCAAGTC | 59.387 | 55.000 | 0.00 | 0.00 | 35.67 | 3.01 |
120 | 121 | 0.612744 | GCTTCCTCTGCTCCAAGTCT | 59.387 | 55.000 | 0.00 | 0.00 | 0.00 | 3.24 |
121 | 122 | 1.675415 | GCTTCCTCTGCTCCAAGTCTG | 60.675 | 57.143 | 0.00 | 0.00 | 0.00 | 3.51 |
122 | 123 | 0.322975 | TTCCTCTGCTCCAAGTCTGC | 59.677 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
123 | 124 | 0.543883 | TCCTCTGCTCCAAGTCTGCT | 60.544 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
124 | 125 | 0.324285 | CCTCTGCTCCAAGTCTGCTT | 59.676 | 55.000 | 0.00 | 0.00 | 34.82 | 3.91 |
125 | 126 | 1.271271 | CCTCTGCTCCAAGTCTGCTTT | 60.271 | 52.381 | 0.00 | 0.00 | 31.49 | 3.51 |
126 | 127 | 2.075338 | CTCTGCTCCAAGTCTGCTTTC | 58.925 | 52.381 | 0.00 | 0.00 | 31.49 | 2.62 |
127 | 128 | 1.696336 | TCTGCTCCAAGTCTGCTTTCT | 59.304 | 47.619 | 0.00 | 0.00 | 31.49 | 2.52 |
128 | 129 | 2.105477 | TCTGCTCCAAGTCTGCTTTCTT | 59.895 | 45.455 | 0.00 | 0.00 | 31.49 | 2.52 |
129 | 130 | 2.483491 | CTGCTCCAAGTCTGCTTTCTTC | 59.517 | 50.000 | 0.00 | 0.00 | 31.49 | 2.87 |
130 | 131 | 1.809547 | GCTCCAAGTCTGCTTTCTTCC | 59.190 | 52.381 | 0.00 | 0.00 | 31.49 | 3.46 |
131 | 132 | 2.072298 | CTCCAAGTCTGCTTTCTTCCG | 58.928 | 52.381 | 0.00 | 0.00 | 31.49 | 4.30 |
132 | 133 | 1.691976 | TCCAAGTCTGCTTTCTTCCGA | 59.308 | 47.619 | 0.00 | 0.00 | 31.49 | 4.55 |
133 | 134 | 1.801178 | CCAAGTCTGCTTTCTTCCGAC | 59.199 | 52.381 | 0.00 | 0.00 | 31.49 | 4.79 |
134 | 135 | 2.483876 | CAAGTCTGCTTTCTTCCGACA | 58.516 | 47.619 | 0.00 | 0.00 | 31.49 | 4.35 |
135 | 136 | 2.872245 | CAAGTCTGCTTTCTTCCGACAA | 59.128 | 45.455 | 0.00 | 0.00 | 31.49 | 3.18 |
136 | 137 | 3.194005 | AGTCTGCTTTCTTCCGACAAA | 57.806 | 42.857 | 0.00 | 0.00 | 0.00 | 2.83 |
137 | 138 | 3.744660 | AGTCTGCTTTCTTCCGACAAAT | 58.255 | 40.909 | 0.00 | 0.00 | 0.00 | 2.32 |
138 | 139 | 3.748568 | AGTCTGCTTTCTTCCGACAAATC | 59.251 | 43.478 | 0.00 | 0.00 | 0.00 | 2.17 |
139 | 140 | 3.748568 | GTCTGCTTTCTTCCGACAAATCT | 59.251 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
140 | 141 | 3.997021 | TCTGCTTTCTTCCGACAAATCTC | 59.003 | 43.478 | 0.00 | 0.00 | 0.00 | 2.75 |
141 | 142 | 3.074412 | TGCTTTCTTCCGACAAATCTCC | 58.926 | 45.455 | 0.00 | 0.00 | 0.00 | 3.71 |
142 | 143 | 2.094417 | GCTTTCTTCCGACAAATCTCCG | 59.906 | 50.000 | 0.00 | 0.00 | 0.00 | 4.63 |
143 | 144 | 1.722011 | TTCTTCCGACAAATCTCCGC | 58.278 | 50.000 | 0.00 | 0.00 | 0.00 | 5.54 |
144 | 145 | 0.457853 | TCTTCCGACAAATCTCCGCG | 60.458 | 55.000 | 0.00 | 0.00 | 0.00 | 6.46 |
145 | 146 | 0.457853 | CTTCCGACAAATCTCCGCGA | 60.458 | 55.000 | 8.23 | 0.00 | 0.00 | 5.87 |
146 | 147 | 0.734942 | TTCCGACAAATCTCCGCGAC | 60.735 | 55.000 | 8.23 | 0.00 | 0.00 | 5.19 |
147 | 148 | 2.165301 | CCGACAAATCTCCGCGACC | 61.165 | 63.158 | 8.23 | 0.00 | 0.00 | 4.79 |
148 | 149 | 1.153823 | CGACAAATCTCCGCGACCT | 60.154 | 57.895 | 8.23 | 0.00 | 0.00 | 3.85 |
149 | 150 | 0.736325 | CGACAAATCTCCGCGACCTT | 60.736 | 55.000 | 8.23 | 0.00 | 0.00 | 3.50 |
150 | 151 | 1.000145 | GACAAATCTCCGCGACCTTC | 59.000 | 55.000 | 8.23 | 0.00 | 0.00 | 3.46 |
151 | 152 | 0.736325 | ACAAATCTCCGCGACCTTCG | 60.736 | 55.000 | 8.23 | 0.00 | 43.89 | 3.79 |
168 | 169 | 2.959071 | GCAGCTGCGGATCTCGTC | 60.959 | 66.667 | 25.23 | 0.00 | 41.72 | 4.20 |
169 | 170 | 2.491621 | CAGCTGCGGATCTCGTCA | 59.508 | 61.111 | 0.00 | 3.99 | 41.72 | 4.35 |
170 | 171 | 1.875813 | CAGCTGCGGATCTCGTCAC | 60.876 | 63.158 | 0.00 | 0.00 | 41.72 | 3.67 |
171 | 172 | 2.583593 | GCTGCGGATCTCGTCACC | 60.584 | 66.667 | 0.00 | 0.00 | 41.72 | 4.02 |
173 | 174 | 3.758088 | CTGCGGATCTCGTCACCGG | 62.758 | 68.421 | 0.00 | 0.00 | 45.66 | 5.28 |
174 | 175 | 3.515286 | GCGGATCTCGTCACCGGA | 61.515 | 66.667 | 9.46 | 0.00 | 45.66 | 5.14 |
175 | 176 | 2.846652 | GCGGATCTCGTCACCGGAT | 61.847 | 63.158 | 9.46 | 0.00 | 45.66 | 4.18 |
176 | 177 | 1.283181 | CGGATCTCGTCACCGGATC | 59.717 | 63.158 | 9.46 | 0.00 | 42.48 | 3.36 |
177 | 178 | 1.283181 | GGATCTCGTCACCGGATCG | 59.717 | 63.158 | 9.46 | 10.01 | 39.55 | 3.69 |
220 | 221 | 4.020617 | CGGCCTTCCACTCCTGCA | 62.021 | 66.667 | 0.00 | 0.00 | 0.00 | 4.41 |
221 | 222 | 2.360475 | GGCCTTCCACTCCTGCAC | 60.360 | 66.667 | 0.00 | 0.00 | 0.00 | 4.57 |
222 | 223 | 2.360475 | GCCTTCCACTCCTGCACC | 60.360 | 66.667 | 0.00 | 0.00 | 0.00 | 5.01 |
223 | 224 | 2.046892 | CCTTCCACTCCTGCACCG | 60.047 | 66.667 | 0.00 | 0.00 | 0.00 | 4.94 |
224 | 225 | 2.046892 | CTTCCACTCCTGCACCGG | 60.047 | 66.667 | 0.00 | 0.00 | 0.00 | 5.28 |
225 | 226 | 2.525629 | TTCCACTCCTGCACCGGA | 60.526 | 61.111 | 9.46 | 0.00 | 0.00 | 5.14 |
226 | 227 | 2.788191 | CTTCCACTCCTGCACCGGAC | 62.788 | 65.000 | 9.46 | 0.00 | 0.00 | 4.79 |
227 | 228 | 4.394712 | CCACTCCTGCACCGGACC | 62.395 | 72.222 | 9.46 | 0.00 | 0.00 | 4.46 |
228 | 229 | 4.742201 | CACTCCTGCACCGGACCG | 62.742 | 72.222 | 9.46 | 6.99 | 0.00 | 4.79 |
239 | 240 | 2.049985 | CGGACCGGATCGATCTGC | 60.050 | 66.667 | 25.97 | 14.60 | 31.76 | 4.26 |
240 | 241 | 2.556459 | CGGACCGGATCGATCTGCT | 61.556 | 63.158 | 25.97 | 14.83 | 31.76 | 4.24 |
241 | 242 | 1.742768 | GGACCGGATCGATCTGCTT | 59.257 | 57.895 | 25.97 | 15.94 | 31.76 | 3.91 |
242 | 243 | 0.598680 | GGACCGGATCGATCTGCTTG | 60.599 | 60.000 | 25.97 | 16.12 | 31.76 | 4.01 |
243 | 244 | 0.103208 | GACCGGATCGATCTGCTTGT | 59.897 | 55.000 | 25.97 | 18.95 | 31.76 | 3.16 |
244 | 245 | 0.179100 | ACCGGATCGATCTGCTTGTG | 60.179 | 55.000 | 25.97 | 15.46 | 31.76 | 3.33 |
245 | 246 | 0.103026 | CCGGATCGATCTGCTTGTGA | 59.897 | 55.000 | 25.97 | 0.00 | 31.76 | 3.58 |
246 | 247 | 1.485397 | CGGATCGATCTGCTTGTGAG | 58.515 | 55.000 | 23.96 | 2.57 | 0.00 | 3.51 |
247 | 248 | 1.202348 | CGGATCGATCTGCTTGTGAGT | 60.202 | 52.381 | 23.96 | 0.00 | 0.00 | 3.41 |
248 | 249 | 2.736719 | CGGATCGATCTGCTTGTGAGTT | 60.737 | 50.000 | 23.96 | 0.00 | 0.00 | 3.01 |
249 | 250 | 3.265791 | GGATCGATCTGCTTGTGAGTTT | 58.734 | 45.455 | 23.96 | 0.00 | 0.00 | 2.66 |
250 | 251 | 3.308323 | GGATCGATCTGCTTGTGAGTTTC | 59.692 | 47.826 | 23.96 | 0.00 | 0.00 | 2.78 |
251 | 252 | 3.385193 | TCGATCTGCTTGTGAGTTTCA | 57.615 | 42.857 | 0.00 | 0.00 | 0.00 | 2.69 |
252 | 253 | 3.930336 | TCGATCTGCTTGTGAGTTTCAT | 58.070 | 40.909 | 0.00 | 0.00 | 0.00 | 2.57 |
253 | 254 | 3.681417 | TCGATCTGCTTGTGAGTTTCATG | 59.319 | 43.478 | 0.00 | 0.00 | 0.00 | 3.07 |
254 | 255 | 3.434641 | CGATCTGCTTGTGAGTTTCATGT | 59.565 | 43.478 | 0.00 | 0.00 | 0.00 | 3.21 |
255 | 256 | 4.083643 | CGATCTGCTTGTGAGTTTCATGTT | 60.084 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
256 | 257 | 5.120674 | CGATCTGCTTGTGAGTTTCATGTTA | 59.879 | 40.000 | 0.00 | 0.00 | 0.00 | 2.41 |
257 | 258 | 5.673337 | TCTGCTTGTGAGTTTCATGTTAC | 57.327 | 39.130 | 0.00 | 0.00 | 0.00 | 2.50 |
258 | 259 | 5.368145 | TCTGCTTGTGAGTTTCATGTTACT | 58.632 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
259 | 260 | 6.521162 | TCTGCTTGTGAGTTTCATGTTACTA | 58.479 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
260 | 261 | 6.646653 | TCTGCTTGTGAGTTTCATGTTACTAG | 59.353 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
261 | 262 | 6.521162 | TGCTTGTGAGTTTCATGTTACTAGA | 58.479 | 36.000 | 0.00 | 0.00 | 0.00 | 2.43 |
262 | 263 | 7.161404 | TGCTTGTGAGTTTCATGTTACTAGAT | 58.839 | 34.615 | 0.00 | 0.00 | 0.00 | 1.98 |
263 | 264 | 7.661437 | TGCTTGTGAGTTTCATGTTACTAGATT | 59.339 | 33.333 | 0.00 | 0.00 | 0.00 | 2.40 |
264 | 265 | 8.171840 | GCTTGTGAGTTTCATGTTACTAGATTC | 58.828 | 37.037 | 0.00 | 0.00 | 0.00 | 2.52 |
265 | 266 | 7.812309 | TGTGAGTTTCATGTTACTAGATTCG | 57.188 | 36.000 | 0.00 | 0.00 | 0.00 | 3.34 |
266 | 267 | 7.599171 | TGTGAGTTTCATGTTACTAGATTCGA | 58.401 | 34.615 | 0.00 | 0.00 | 0.00 | 3.71 |
267 | 268 | 8.085909 | TGTGAGTTTCATGTTACTAGATTCGAA | 58.914 | 33.333 | 0.00 | 0.00 | 0.00 | 3.71 |
268 | 269 | 8.373992 | GTGAGTTTCATGTTACTAGATTCGAAC | 58.626 | 37.037 | 0.00 | 0.00 | 0.00 | 3.95 |
269 | 270 | 8.085909 | TGAGTTTCATGTTACTAGATTCGAACA | 58.914 | 33.333 | 0.00 | 0.00 | 36.32 | 3.18 |
270 | 271 | 9.088512 | GAGTTTCATGTTACTAGATTCGAACAT | 57.911 | 33.333 | 0.00 | 0.00 | 41.92 | 2.71 |
271 | 272 | 9.436957 | AGTTTCATGTTACTAGATTCGAACATT | 57.563 | 29.630 | 0.00 | 0.00 | 39.81 | 2.71 |
285 | 286 | 9.681062 | AGATTCGAACATTTTAATAGGGAAGAA | 57.319 | 29.630 | 0.00 | 0.00 | 0.00 | 2.52 |
296 | 297 | 9.869757 | TTTTAATAGGGAAGAAAATAAAGCTGC | 57.130 | 29.630 | 0.00 | 0.00 | 0.00 | 5.25 |
297 | 298 | 8.823220 | TTAATAGGGAAGAAAATAAAGCTGCT | 57.177 | 30.769 | 0.00 | 0.00 | 0.00 | 4.24 |
298 | 299 | 6.951062 | ATAGGGAAGAAAATAAAGCTGCTC | 57.049 | 37.500 | 1.00 | 0.00 | 0.00 | 4.26 |
299 | 300 | 4.666512 | AGGGAAGAAAATAAAGCTGCTCA | 58.333 | 39.130 | 1.00 | 0.00 | 0.00 | 4.26 |
300 | 301 | 4.460731 | AGGGAAGAAAATAAAGCTGCTCAC | 59.539 | 41.667 | 1.00 | 0.00 | 0.00 | 3.51 |
301 | 302 | 4.460731 | GGGAAGAAAATAAAGCTGCTCACT | 59.539 | 41.667 | 1.00 | 0.00 | 0.00 | 3.41 |
302 | 303 | 5.648092 | GGGAAGAAAATAAAGCTGCTCACTA | 59.352 | 40.000 | 1.00 | 0.00 | 0.00 | 2.74 |
303 | 304 | 6.183360 | GGGAAGAAAATAAAGCTGCTCACTAG | 60.183 | 42.308 | 1.00 | 0.00 | 0.00 | 2.57 |
317 | 318 | 4.223659 | GCTCACTAGCTCGTTAGATTAGC | 58.776 | 47.826 | 3.88 | 0.00 | 45.85 | 3.09 |
319 | 320 | 5.179742 | GCTCACTAGCTCGTTAGATTAGCTA | 59.820 | 44.000 | 3.88 | 0.00 | 44.55 | 3.32 |
327 | 328 | 7.947282 | AGCTCGTTAGATTAGCTAGATTTTCT | 58.053 | 34.615 | 0.00 | 0.00 | 44.55 | 2.52 |
328 | 329 | 8.417884 | AGCTCGTTAGATTAGCTAGATTTTCTT | 58.582 | 33.333 | 0.00 | 0.00 | 44.55 | 2.52 |
329 | 330 | 9.036671 | GCTCGTTAGATTAGCTAGATTTTCTTT | 57.963 | 33.333 | 0.00 | 0.00 | 33.40 | 2.52 |
339 | 340 | 7.807977 | AGCTAGATTTTCTTTGACTTTGTGA | 57.192 | 32.000 | 0.00 | 0.00 | 0.00 | 3.58 |
340 | 341 | 8.401490 | AGCTAGATTTTCTTTGACTTTGTGAT | 57.599 | 30.769 | 0.00 | 0.00 | 0.00 | 3.06 |
341 | 342 | 8.854117 | AGCTAGATTTTCTTTGACTTTGTGATT | 58.146 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
342 | 343 | 8.909671 | GCTAGATTTTCTTTGACTTTGTGATTG | 58.090 | 33.333 | 0.00 | 0.00 | 0.00 | 2.67 |
343 | 344 | 9.403110 | CTAGATTTTCTTTGACTTTGTGATTGG | 57.597 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
344 | 345 | 7.785033 | AGATTTTCTTTGACTTTGTGATTGGT | 58.215 | 30.769 | 0.00 | 0.00 | 0.00 | 3.67 |
345 | 346 | 8.260114 | AGATTTTCTTTGACTTTGTGATTGGTT | 58.740 | 29.630 | 0.00 | 0.00 | 0.00 | 3.67 |
346 | 347 | 8.791327 | ATTTTCTTTGACTTTGTGATTGGTTT | 57.209 | 26.923 | 0.00 | 0.00 | 0.00 | 3.27 |
347 | 348 | 7.593875 | TTTCTTTGACTTTGTGATTGGTTTG | 57.406 | 32.000 | 0.00 | 0.00 | 0.00 | 2.93 |
348 | 349 | 6.522625 | TCTTTGACTTTGTGATTGGTTTGA | 57.477 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
349 | 350 | 6.563422 | TCTTTGACTTTGTGATTGGTTTGAG | 58.437 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
350 | 351 | 6.376864 | TCTTTGACTTTGTGATTGGTTTGAGA | 59.623 | 34.615 | 0.00 | 0.00 | 0.00 | 3.27 |
351 | 352 | 6.522625 | TTGACTTTGTGATTGGTTTGAGAA | 57.477 | 33.333 | 0.00 | 0.00 | 0.00 | 2.87 |
352 | 353 | 6.135290 | TGACTTTGTGATTGGTTTGAGAAG | 57.865 | 37.500 | 0.00 | 0.00 | 0.00 | 2.85 |
353 | 354 | 4.936891 | ACTTTGTGATTGGTTTGAGAAGC | 58.063 | 39.130 | 0.00 | 0.00 | 0.00 | 3.86 |
354 | 355 | 4.202151 | ACTTTGTGATTGGTTTGAGAAGCC | 60.202 | 41.667 | 0.00 | 0.00 | 32.33 | 4.35 |
355 | 356 | 2.238521 | TGTGATTGGTTTGAGAAGCCC | 58.761 | 47.619 | 0.00 | 0.00 | 32.33 | 5.19 |
356 | 357 | 2.158475 | TGTGATTGGTTTGAGAAGCCCT | 60.158 | 45.455 | 0.00 | 0.00 | 32.33 | 5.19 |
357 | 358 | 2.893489 | GTGATTGGTTTGAGAAGCCCTT | 59.107 | 45.455 | 0.00 | 0.00 | 32.33 | 3.95 |
358 | 359 | 3.321968 | GTGATTGGTTTGAGAAGCCCTTT | 59.678 | 43.478 | 0.00 | 0.00 | 32.33 | 3.11 |
359 | 360 | 4.522789 | GTGATTGGTTTGAGAAGCCCTTTA | 59.477 | 41.667 | 0.00 | 0.00 | 32.33 | 1.85 |
360 | 361 | 5.010617 | GTGATTGGTTTGAGAAGCCCTTTAA | 59.989 | 40.000 | 0.00 | 0.00 | 32.33 | 1.52 |
361 | 362 | 4.929819 | TTGGTTTGAGAAGCCCTTTAAC | 57.070 | 40.909 | 0.00 | 0.00 | 32.33 | 2.01 |
362 | 363 | 4.178956 | TGGTTTGAGAAGCCCTTTAACT | 57.821 | 40.909 | 0.00 | 0.00 | 32.33 | 2.24 |
363 | 364 | 3.888930 | TGGTTTGAGAAGCCCTTTAACTG | 59.111 | 43.478 | 0.00 | 0.00 | 32.33 | 3.16 |
364 | 365 | 4.142038 | GGTTTGAGAAGCCCTTTAACTGA | 58.858 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
365 | 366 | 4.583073 | GGTTTGAGAAGCCCTTTAACTGAA | 59.417 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
366 | 367 | 5.068591 | GGTTTGAGAAGCCCTTTAACTGAAA | 59.931 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
367 | 368 | 6.406512 | GGTTTGAGAAGCCCTTTAACTGAAAA | 60.407 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
368 | 369 | 6.976934 | TTGAGAAGCCCTTTAACTGAAAAT | 57.023 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
369 | 370 | 6.976934 | TGAGAAGCCCTTTAACTGAAAATT | 57.023 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
370 | 371 | 8.472007 | TTGAGAAGCCCTTTAACTGAAAATTA | 57.528 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
371 | 372 | 8.650143 | TGAGAAGCCCTTTAACTGAAAATTAT | 57.350 | 30.769 | 0.00 | 0.00 | 0.00 | 1.28 |
372 | 373 | 9.747898 | TGAGAAGCCCTTTAACTGAAAATTATA | 57.252 | 29.630 | 0.00 | 0.00 | 0.00 | 0.98 |
374 | 375 | 8.967918 | AGAAGCCCTTTAACTGAAAATTATACC | 58.032 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
375 | 376 | 7.329588 | AGCCCTTTAACTGAAAATTATACCG | 57.670 | 36.000 | 0.00 | 0.00 | 0.00 | 4.02 |
376 | 377 | 7.114095 | AGCCCTTTAACTGAAAATTATACCGA | 58.886 | 34.615 | 0.00 | 0.00 | 0.00 | 4.69 |
377 | 378 | 7.778382 | AGCCCTTTAACTGAAAATTATACCGAT | 59.222 | 33.333 | 0.00 | 0.00 | 0.00 | 4.18 |
378 | 379 | 8.074370 | GCCCTTTAACTGAAAATTATACCGATC | 58.926 | 37.037 | 0.00 | 0.00 | 0.00 | 3.69 |
379 | 380 | 8.565416 | CCCTTTAACTGAAAATTATACCGATCC | 58.435 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
380 | 381 | 9.338622 | CCTTTAACTGAAAATTATACCGATCCT | 57.661 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
382 | 383 | 9.893634 | TTTAACTGAAAATTATACCGATCCTCA | 57.106 | 29.630 | 0.00 | 0.00 | 0.00 | 3.86 |
388 | 389 | 8.984764 | TGAAAATTATACCGATCCTCATAAACG | 58.015 | 33.333 | 0.00 | 0.00 | 0.00 | 3.60 |
389 | 390 | 9.199982 | GAAAATTATACCGATCCTCATAAACGA | 57.800 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
390 | 391 | 9.720769 | AAAATTATACCGATCCTCATAAACGAT | 57.279 | 29.630 | 0.00 | 0.00 | 0.00 | 3.73 |
391 | 392 | 8.703604 | AATTATACCGATCCTCATAAACGATG | 57.296 | 34.615 | 0.00 | 0.00 | 36.82 | 3.84 |
404 | 405 | 8.620416 | CCTCATAAACGATGTTTCCAATGAATA | 58.380 | 33.333 | 0.00 | 0.00 | 36.84 | 1.75 |
461 | 462 | 2.604912 | ACTGAAACCCCTGAATTCCC | 57.395 | 50.000 | 2.27 | 0.00 | 0.00 | 3.97 |
478 | 479 | 7.109501 | TGAATTCCCTGAATAAACAGATCGAA | 58.890 | 34.615 | 2.27 | 0.00 | 39.94 | 3.71 |
506 | 516 | 9.726232 | GTTATTCTAAAAAGAAGAAAACACCGT | 57.274 | 29.630 | 0.00 | 0.00 | 36.60 | 4.83 |
509 | 519 | 9.726232 | ATTCTAAAAAGAAGAAAACACCGTAAC | 57.274 | 29.630 | 0.00 | 0.00 | 36.60 | 2.50 |
512 | 522 | 9.563898 | CTAAAAAGAAGAAAACACCGTAACTTT | 57.436 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
522 | 532 | 3.257624 | ACACCGTAACTTTAGGGTCTCAG | 59.742 | 47.826 | 9.87 | 3.30 | 45.85 | 3.35 |
538 | 548 | 1.227674 | CAGATCTAAGGCCGGCCAC | 60.228 | 63.158 | 45.13 | 26.69 | 38.92 | 5.01 |
552 | 562 | 2.307768 | CGGCCACAGTCCTCTTATCTA | 58.692 | 52.381 | 2.24 | 0.00 | 0.00 | 1.98 |
553 | 563 | 2.294791 | CGGCCACAGTCCTCTTATCTAG | 59.705 | 54.545 | 2.24 | 0.00 | 0.00 | 2.43 |
555 | 565 | 3.961408 | GGCCACAGTCCTCTTATCTAGAA | 59.039 | 47.826 | 0.00 | 0.00 | 30.91 | 2.10 |
556 | 566 | 4.202172 | GGCCACAGTCCTCTTATCTAGAAC | 60.202 | 50.000 | 0.00 | 0.00 | 30.91 | 3.01 |
557 | 567 | 4.647399 | GCCACAGTCCTCTTATCTAGAACT | 59.353 | 45.833 | 0.00 | 0.00 | 30.91 | 3.01 |
558 | 568 | 5.828859 | GCCACAGTCCTCTTATCTAGAACTA | 59.171 | 44.000 | 0.00 | 0.00 | 30.91 | 2.24 |
559 | 569 | 6.492087 | GCCACAGTCCTCTTATCTAGAACTAT | 59.508 | 42.308 | 0.00 | 0.00 | 30.91 | 2.12 |
560 | 570 | 7.014808 | GCCACAGTCCTCTTATCTAGAACTATT | 59.985 | 40.741 | 0.00 | 0.00 | 30.91 | 1.73 |
561 | 571 | 9.575868 | CCACAGTCCTCTTATCTAGAACTATTA | 57.424 | 37.037 | 0.00 | 0.00 | 30.91 | 0.98 |
563 | 573 | 9.292195 | ACAGTCCTCTTATCTAGAACTATTAGC | 57.708 | 37.037 | 0.00 | 0.00 | 30.91 | 3.09 |
564 | 574 | 9.290988 | CAGTCCTCTTATCTAGAACTATTAGCA | 57.709 | 37.037 | 0.00 | 0.00 | 30.91 | 3.49 |
576 | 586 | 3.869065 | ACTATTAGCAAGCAAGCGGTTA | 58.131 | 40.909 | 0.00 | 0.00 | 40.15 | 2.85 |
579 | 589 | 0.732571 | TAGCAAGCAAGCGGTTATGC | 59.267 | 50.000 | 18.57 | 18.57 | 42.87 | 3.14 |
580 | 590 | 1.212490 | GCAAGCAAGCGGTTATGCA | 59.788 | 52.632 | 20.29 | 0.00 | 44.95 | 3.96 |
581 | 591 | 0.799534 | GCAAGCAAGCGGTTATGCAG | 60.800 | 55.000 | 20.29 | 11.35 | 44.95 | 4.41 |
582 | 592 | 0.804364 | CAAGCAAGCGGTTATGCAGA | 59.196 | 50.000 | 13.26 | 0.00 | 44.95 | 4.26 |
609 | 619 | 1.480137 | CCCTAGTCAGCTGAGTCCAAG | 59.520 | 57.143 | 27.12 | 18.33 | 0.00 | 3.61 |
614 | 624 | 5.304101 | CCTAGTCAGCTGAGTCCAAGATATT | 59.696 | 44.000 | 27.12 | 0.00 | 0.00 | 1.28 |
630 | 640 | 4.513442 | AGATATTGTGTTGCATGTACGGT | 58.487 | 39.130 | 0.00 | 0.00 | 0.00 | 4.83 |
674 | 703 | 4.404098 | GACCCGCATGTCCCGGTT | 62.404 | 66.667 | 0.00 | 0.00 | 44.13 | 4.44 |
742 | 772 | 4.845307 | CTTCCCCCTCCCCTCCCC | 62.845 | 77.778 | 0.00 | 0.00 | 0.00 | 4.81 |
763 | 793 | 3.617824 | CAGCGATTCGATGGACGG | 58.382 | 61.111 | 16.15 | 0.00 | 39.68 | 4.79 |
764 | 794 | 1.065764 | CAGCGATTCGATGGACGGA | 59.934 | 57.895 | 16.15 | 0.00 | 39.68 | 4.69 |
765 | 795 | 0.319040 | CAGCGATTCGATGGACGGAT | 60.319 | 55.000 | 16.15 | 0.00 | 43.57 | 4.18 |
766 | 796 | 0.319040 | AGCGATTCGATGGACGGATG | 60.319 | 55.000 | 10.88 | 0.00 | 40.66 | 3.51 |
767 | 797 | 1.891060 | GCGATTCGATGGACGGATGC | 61.891 | 60.000 | 10.88 | 0.00 | 40.66 | 3.91 |
768 | 798 | 0.597377 | CGATTCGATGGACGGATGCA | 60.597 | 55.000 | 0.00 | 0.00 | 40.66 | 3.96 |
769 | 799 | 1.581934 | GATTCGATGGACGGATGCAA | 58.418 | 50.000 | 0.00 | 0.00 | 40.66 | 4.08 |
770 | 800 | 1.261619 | GATTCGATGGACGGATGCAAC | 59.738 | 52.381 | 0.00 | 0.00 | 40.66 | 4.17 |
819 | 849 | 1.804601 | CCCGTGGAGGTTTGTTACTC | 58.195 | 55.000 | 0.00 | 0.00 | 38.74 | 2.59 |
855 | 909 | 4.222847 | GAGCCCCGCTAACTCCGG | 62.223 | 72.222 | 0.00 | 0.00 | 39.88 | 5.14 |
940 | 994 | 4.283722 | GTCCTCCTCTTTTACTTGGTCTCA | 59.716 | 45.833 | 0.00 | 0.00 | 0.00 | 3.27 |
943 | 997 | 3.006537 | TCCTCTTTTACTTGGTCTCACCG | 59.993 | 47.826 | 0.00 | 0.00 | 42.58 | 4.94 |
944 | 998 | 3.244112 | CCTCTTTTACTTGGTCTCACCGT | 60.244 | 47.826 | 0.00 | 0.00 | 42.58 | 4.83 |
945 | 999 | 3.986277 | TCTTTTACTTGGTCTCACCGTC | 58.014 | 45.455 | 0.00 | 0.00 | 42.58 | 4.79 |
947 | 1001 | 1.707106 | TTACTTGGTCTCACCGTCCA | 58.293 | 50.000 | 0.00 | 0.00 | 42.58 | 4.02 |
948 | 1002 | 1.933021 | TACTTGGTCTCACCGTCCAT | 58.067 | 50.000 | 0.00 | 0.00 | 42.58 | 3.41 |
949 | 1003 | 0.608640 | ACTTGGTCTCACCGTCCATC | 59.391 | 55.000 | 0.00 | 0.00 | 42.58 | 3.51 |
950 | 1004 | 0.458543 | CTTGGTCTCACCGTCCATCG | 60.459 | 60.000 | 0.00 | 0.00 | 42.58 | 3.84 |
1593 | 1675 | 3.625897 | CACCTGCTCACCACGGGA | 61.626 | 66.667 | 0.00 | 0.00 | 37.00 | 5.14 |
2140 | 2241 | 1.067821 | GGACTAGCTTCCAGACCATCG | 59.932 | 57.143 | 0.00 | 0.00 | 35.49 | 3.84 |
2225 | 2336 | 7.979444 | TTAATAATCGGATTCCTCCATGAAC | 57.021 | 36.000 | 6.49 | 0.00 | 42.19 | 3.18 |
2226 | 2337 | 5.832539 | ATAATCGGATTCCTCCATGAACT | 57.167 | 39.130 | 6.49 | 0.00 | 42.19 | 3.01 |
2227 | 2338 | 3.760580 | ATCGGATTCCTCCATGAACTC | 57.239 | 47.619 | 0.30 | 0.00 | 42.19 | 3.01 |
2229 | 2340 | 3.041211 | TCGGATTCCTCCATGAACTCAT | 58.959 | 45.455 | 0.30 | 0.00 | 42.19 | 2.90 |
2448 | 2565 | 3.897122 | AACCACGGCCACCACCAT | 61.897 | 61.111 | 2.24 | 0.00 | 0.00 | 3.55 |
2820 | 2937 | 0.820226 | TGACCGAGGAGCAGATGAAG | 59.180 | 55.000 | 0.00 | 0.00 | 0.00 | 3.02 |
3129 | 3249 | 1.139095 | GTTCGAGGAGCTGTACGGG | 59.861 | 63.158 | 3.34 | 0.00 | 0.00 | 5.28 |
3285 | 3405 | 6.246449 | CACTTGAAATCATTGATCACTCGTC | 58.754 | 40.000 | 0.00 | 0.00 | 0.00 | 4.20 |
3301 | 3421 | 6.165577 | TCACTCGTCATGAATGAATTCTTGA | 58.834 | 36.000 | 14.36 | 14.36 | 43.97 | 3.02 |
3307 | 3427 | 6.487960 | GTCATGAATGAATTCTTGAGCTGAG | 58.512 | 40.000 | 17.30 | 0.00 | 45.57 | 3.35 |
3309 | 3429 | 6.315642 | TCATGAATGAATTCTTGAGCTGAGAC | 59.684 | 38.462 | 14.36 | 0.00 | 42.43 | 3.36 |
3310 | 3430 | 4.628766 | TGAATGAATTCTTGAGCTGAGACG | 59.371 | 41.667 | 7.05 | 0.00 | 37.67 | 4.18 |
3311 | 3431 | 3.667497 | TGAATTCTTGAGCTGAGACGT | 57.333 | 42.857 | 7.05 | 0.00 | 0.00 | 4.34 |
3314 | 3434 | 3.883830 | ATTCTTGAGCTGAGACGTGAT | 57.116 | 42.857 | 0.00 | 0.00 | 0.00 | 3.06 |
3388 | 3508 | 2.817834 | GCCGGCAGCGACAACATA | 60.818 | 61.111 | 24.80 | 0.00 | 0.00 | 2.29 |
3405 | 3525 | 3.059097 | ACATAGGGGGCTGAGAATGAAT | 58.941 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
3412 | 3532 | 2.358267 | GGGCTGAGAATGAATGAAGCAG | 59.642 | 50.000 | 0.00 | 0.00 | 32.28 | 4.24 |
3413 | 3533 | 2.223525 | GGCTGAGAATGAATGAAGCAGC | 60.224 | 50.000 | 0.00 | 0.00 | 44.64 | 5.25 |
3414 | 3534 | 2.539142 | GCTGAGAATGAATGAAGCAGCG | 60.539 | 50.000 | 0.00 | 0.00 | 38.02 | 5.18 |
3415 | 3535 | 2.011947 | TGAGAATGAATGAAGCAGCGG | 58.988 | 47.619 | 0.00 | 0.00 | 0.00 | 5.52 |
3416 | 3536 | 2.283298 | GAGAATGAATGAAGCAGCGGA | 58.717 | 47.619 | 0.00 | 0.00 | 0.00 | 5.54 |
3417 | 3537 | 2.012673 | AGAATGAATGAAGCAGCGGAC | 58.987 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
3422 | 3542 | 1.739466 | GAATGAAGCAGCGGACAATCA | 59.261 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
3445 | 3565 | 6.929049 | TCATCATTAGCCGAATAACTTAGGTG | 59.071 | 38.462 | 0.00 | 0.00 | 30.36 | 4.00 |
3468 | 3589 | 1.463674 | GGCCATTCCAAGTCGTCATT | 58.536 | 50.000 | 0.00 | 0.00 | 34.01 | 2.57 |
3571 | 3699 | 5.411831 | AGCTCATTTCCCTTTCATTTTCC | 57.588 | 39.130 | 0.00 | 0.00 | 0.00 | 3.13 |
3680 | 3808 | 1.322338 | CGAATGTAACGTACTTGCCGG | 59.678 | 52.381 | 0.00 | 0.00 | 0.00 | 6.13 |
3681 | 3809 | 1.061566 | GAATGTAACGTACTTGCCGGC | 59.938 | 52.381 | 22.73 | 22.73 | 0.00 | 6.13 |
3682 | 3810 | 0.248289 | ATGTAACGTACTTGCCGGCT | 59.752 | 50.000 | 29.70 | 10.43 | 0.00 | 5.52 |
3683 | 3811 | 0.668096 | TGTAACGTACTTGCCGGCTG | 60.668 | 55.000 | 29.70 | 22.14 | 0.00 | 4.85 |
3684 | 3812 | 1.738830 | TAACGTACTTGCCGGCTGC | 60.739 | 57.895 | 29.70 | 10.34 | 41.77 | 5.25 |
3688 | 3816 | 2.438254 | TACTTGCCGGCTGCCATG | 60.438 | 61.111 | 29.70 | 11.87 | 40.16 | 3.66 |
3689 | 3817 | 3.993614 | TACTTGCCGGCTGCCATGG | 62.994 | 63.158 | 29.70 | 13.80 | 40.16 | 3.66 |
3702 | 3830 | 4.034258 | CATGGCATGCCGCGGATC | 62.034 | 66.667 | 33.48 | 13.46 | 43.84 | 3.36 |
3703 | 3831 | 4.260609 | ATGGCATGCCGCGGATCT | 62.261 | 61.111 | 33.48 | 9.37 | 43.84 | 2.75 |
3704 | 3832 | 4.916293 | TGGCATGCCGCGGATCTC | 62.916 | 66.667 | 33.48 | 12.13 | 43.84 | 2.75 |
3706 | 3834 | 4.615815 | GCATGCCGCGGATCTCCT | 62.616 | 66.667 | 33.48 | 0.00 | 0.00 | 3.69 |
3707 | 3835 | 2.356793 | CATGCCGCGGATCTCCTC | 60.357 | 66.667 | 33.48 | 9.92 | 0.00 | 3.71 |
3710 | 3838 | 1.690219 | ATGCCGCGGATCTCCTCTTT | 61.690 | 55.000 | 33.48 | 0.00 | 0.00 | 2.52 |
3722 | 3850 | 5.817816 | GGATCTCCTCTTTTTATTTCGCTGA | 59.182 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
3724 | 3852 | 5.794894 | TCTCCTCTTTTTATTTCGCTGAGT | 58.205 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
3794 | 3924 | 3.948719 | GCCAACCGGTCCACCAGA | 61.949 | 66.667 | 8.04 | 0.00 | 35.14 | 3.86 |
3824 | 3955 | 2.298610 | CAAGCTCATCATCATGCAGGT | 58.701 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
3825 | 3956 | 2.257691 | AGCTCATCATCATGCAGGTC | 57.742 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3876 | 4007 | 4.995124 | TGCCTCGAGAACATTTACTACTC | 58.005 | 43.478 | 15.71 | 0.00 | 0.00 | 2.59 |
3879 | 4010 | 5.264712 | CCTCGAGAACATTTACTACTCGTC | 58.735 | 45.833 | 15.71 | 0.00 | 46.52 | 4.20 |
3883 | 4014 | 5.579564 | AGAACATTTACTACTCGTCCTCC | 57.420 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
3884 | 4015 | 4.401837 | AGAACATTTACTACTCGTCCTCCC | 59.598 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
3885 | 4016 | 3.978610 | ACATTTACTACTCGTCCTCCCT | 58.021 | 45.455 | 0.00 | 0.00 | 0.00 | 4.20 |
3886 | 4017 | 3.700038 | ACATTTACTACTCGTCCTCCCTG | 59.300 | 47.826 | 0.00 | 0.00 | 0.00 | 4.45 |
3902 | 4034 | 1.523258 | CTGCCCTGCCGATTCTGAG | 60.523 | 63.158 | 0.00 | 0.00 | 0.00 | 3.35 |
3944 | 4076 | 2.279517 | GGGCGTCTCATACTGGCG | 60.280 | 66.667 | 0.00 | 0.00 | 0.00 | 5.69 |
4035 | 4178 | 0.387929 | CATGCCATGCCATGTCCTTC | 59.612 | 55.000 | 8.49 | 0.00 | 38.19 | 3.46 |
4089 | 4232 | 3.561120 | ATTTTGGCGCGGGGAGACA | 62.561 | 57.895 | 8.83 | 0.00 | 0.00 | 3.41 |
4097 | 4240 | 1.315690 | CGCGGGGAGACAATACTCTA | 58.684 | 55.000 | 0.00 | 0.00 | 37.13 | 2.43 |
4098 | 4241 | 1.887198 | CGCGGGGAGACAATACTCTAT | 59.113 | 52.381 | 0.00 | 0.00 | 37.13 | 1.98 |
4099 | 4242 | 2.351835 | CGCGGGGAGACAATACTCTATG | 60.352 | 54.545 | 0.00 | 0.00 | 37.13 | 2.23 |
4100 | 4243 | 2.891580 | GCGGGGAGACAATACTCTATGA | 59.108 | 50.000 | 0.00 | 0.00 | 37.13 | 2.15 |
4101 | 4244 | 3.057174 | GCGGGGAGACAATACTCTATGAG | 60.057 | 52.174 | 0.00 | 0.00 | 37.13 | 2.90 |
4102 | 4245 | 4.399219 | CGGGGAGACAATACTCTATGAGA | 58.601 | 47.826 | 1.25 | 0.00 | 37.13 | 3.27 |
4103 | 4246 | 5.013547 | CGGGGAGACAATACTCTATGAGAT | 58.986 | 45.833 | 1.25 | 0.00 | 37.13 | 2.75 |
4104 | 4247 | 5.105957 | CGGGGAGACAATACTCTATGAGATG | 60.106 | 48.000 | 1.25 | 1.07 | 37.13 | 2.90 |
4145 | 4288 | 2.781681 | ACCGGATCGACCAAAAGAAT | 57.218 | 45.000 | 9.46 | 0.00 | 38.90 | 2.40 |
4154 | 4297 | 2.159707 | CGACCAAAAGAATAGTGCACCG | 60.160 | 50.000 | 14.63 | 0.66 | 0.00 | 4.94 |
4196 | 4343 | 2.435693 | GGACCCTGACCTCCCATCG | 61.436 | 68.421 | 0.00 | 0.00 | 0.00 | 3.84 |
4261 | 4408 | 6.380095 | CTCCTGATGTTGGAGTACTAGTAC | 57.620 | 45.833 | 23.03 | 23.03 | 44.42 | 2.73 |
4263 | 4410 | 7.204243 | TCCTGATGTTGGAGTACTAGTACTA | 57.796 | 40.000 | 30.80 | 17.98 | 45.63 | 1.82 |
4296 | 4443 | 2.417107 | CCTTTGTGCACTGCTGAAAACA | 60.417 | 45.455 | 19.41 | 0.00 | 0.00 | 2.83 |
4301 | 4448 | 1.312815 | GCACTGCTGAAAACAGAGGT | 58.687 | 50.000 | 0.00 | 0.00 | 38.55 | 3.85 |
4308 | 4463 | 2.224548 | GCTGAAAACAGAGGTACCCACT | 60.225 | 50.000 | 8.74 | 5.80 | 0.00 | 4.00 |
4367 | 4524 | 0.106918 | TTGGTGTTTTGCGTCCTCCT | 60.107 | 50.000 | 0.00 | 0.00 | 0.00 | 3.69 |
4369 | 4526 | 0.591659 | GGTGTTTTGCGTCCTCCTTC | 59.408 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
4391 | 4548 | 1.582937 | CTTATCAGCGCGTCGTCGT | 60.583 | 57.895 | 8.43 | 0.00 | 39.49 | 4.34 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 2.573340 | GTGATTTGGGCAAGGGCG | 59.427 | 61.111 | 0.00 | 0.00 | 42.47 | 6.13 |
1 | 2 | 1.531739 | TTCGTGATTTGGGCAAGGGC | 61.532 | 55.000 | 0.00 | 0.00 | 40.13 | 5.19 |
3 | 4 | 1.200020 | GAGTTCGTGATTTGGGCAAGG | 59.800 | 52.381 | 0.00 | 0.00 | 0.00 | 3.61 |
5 | 6 | 1.243902 | GGAGTTCGTGATTTGGGCAA | 58.756 | 50.000 | 0.00 | 0.00 | 0.00 | 4.52 |
7 | 8 | 0.672401 | TCGGAGTTCGTGATTTGGGC | 60.672 | 55.000 | 0.00 | 0.00 | 40.32 | 5.36 |
9 | 10 | 0.713883 | CGTCGGAGTTCGTGATTTGG | 59.286 | 55.000 | 0.00 | 0.00 | 40.32 | 3.28 |
10 | 11 | 0.713883 | CCGTCGGAGTTCGTGATTTG | 59.286 | 55.000 | 4.91 | 0.00 | 40.32 | 2.32 |
11 | 12 | 1.012486 | GCCGTCGGAGTTCGTGATTT | 61.012 | 55.000 | 17.49 | 0.00 | 40.32 | 2.17 |
12 | 13 | 1.445582 | GCCGTCGGAGTTCGTGATT | 60.446 | 57.895 | 17.49 | 0.00 | 40.32 | 2.57 |
13 | 14 | 2.181021 | GCCGTCGGAGTTCGTGAT | 59.819 | 61.111 | 17.49 | 0.00 | 40.32 | 3.06 |
14 | 15 | 4.394078 | CGCCGTCGGAGTTCGTGA | 62.394 | 66.667 | 17.49 | 0.00 | 40.32 | 4.35 |
29 | 30 | 3.929948 | CATTTCCGCTCTCGCCGC | 61.930 | 66.667 | 0.00 | 0.00 | 0.00 | 6.53 |
30 | 31 | 3.264897 | CCATTTCCGCTCTCGCCG | 61.265 | 66.667 | 0.00 | 0.00 | 0.00 | 6.46 |
31 | 32 | 2.897350 | CCCATTTCCGCTCTCGCC | 60.897 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
32 | 33 | 2.897350 | CCCCATTTCCGCTCTCGC | 60.897 | 66.667 | 0.00 | 0.00 | 0.00 | 5.03 |
33 | 34 | 2.203070 | CCCCCATTTCCGCTCTCG | 60.203 | 66.667 | 0.00 | 0.00 | 0.00 | 4.04 |
34 | 35 | 2.517166 | GCCCCCATTTCCGCTCTC | 60.517 | 66.667 | 0.00 | 0.00 | 0.00 | 3.20 |
35 | 36 | 2.631012 | GATGCCCCCATTTCCGCTCT | 62.631 | 60.000 | 0.00 | 0.00 | 0.00 | 4.09 |
36 | 37 | 2.123726 | ATGCCCCCATTTCCGCTC | 60.124 | 61.111 | 0.00 | 0.00 | 0.00 | 5.03 |
37 | 38 | 2.123726 | GATGCCCCCATTTCCGCT | 60.124 | 61.111 | 0.00 | 0.00 | 0.00 | 5.52 |
38 | 39 | 3.226537 | GGATGCCCCCATTTCCGC | 61.227 | 66.667 | 0.00 | 0.00 | 0.00 | 5.54 |
39 | 40 | 1.076044 | AAGGATGCCCCCATTTCCG | 60.076 | 57.895 | 0.00 | 0.00 | 34.66 | 4.30 |
40 | 41 | 2.519937 | CAAGGATGCCCCCATTTCC | 58.480 | 57.895 | 0.00 | 0.00 | 34.66 | 3.13 |
51 | 52 | 1.413445 | CTGGAGGAGAGAGCAAGGATG | 59.587 | 57.143 | 0.00 | 0.00 | 0.00 | 3.51 |
52 | 53 | 1.792115 | CTGGAGGAGAGAGCAAGGAT | 58.208 | 55.000 | 0.00 | 0.00 | 0.00 | 3.24 |
53 | 54 | 0.975040 | GCTGGAGGAGAGAGCAAGGA | 60.975 | 60.000 | 0.00 | 0.00 | 32.70 | 3.36 |
54 | 55 | 1.521616 | GCTGGAGGAGAGAGCAAGG | 59.478 | 63.158 | 0.00 | 0.00 | 32.70 | 3.61 |
55 | 56 | 1.141449 | CGCTGGAGGAGAGAGCAAG | 59.859 | 63.158 | 0.00 | 0.00 | 32.70 | 4.01 |
56 | 57 | 1.607756 | ACGCTGGAGGAGAGAGCAA | 60.608 | 57.895 | 0.00 | 0.00 | 32.70 | 3.91 |
57 | 58 | 2.036414 | ACGCTGGAGGAGAGAGCA | 59.964 | 61.111 | 0.00 | 0.00 | 32.70 | 4.26 |
58 | 59 | 2.493973 | CACGCTGGAGGAGAGAGC | 59.506 | 66.667 | 0.00 | 0.00 | 0.00 | 4.09 |
59 | 60 | 3.074999 | GCCACGCTGGAGGAGAGAG | 62.075 | 68.421 | 8.04 | 0.00 | 40.96 | 3.20 |
60 | 61 | 3.071206 | GCCACGCTGGAGGAGAGA | 61.071 | 66.667 | 8.04 | 0.00 | 40.96 | 3.10 |
61 | 62 | 4.154347 | GGCCACGCTGGAGGAGAG | 62.154 | 72.222 | 0.00 | 0.00 | 40.96 | 3.20 |
62 | 63 | 4.704103 | AGGCCACGCTGGAGGAGA | 62.704 | 66.667 | 5.01 | 0.00 | 40.96 | 3.71 |
63 | 64 | 4.154347 | GAGGCCACGCTGGAGGAG | 62.154 | 72.222 | 5.01 | 0.00 | 40.96 | 3.69 |
64 | 65 | 4.704103 | AGAGGCCACGCTGGAGGA | 62.704 | 66.667 | 5.01 | 0.00 | 40.96 | 3.71 |
65 | 66 | 3.672295 | GAAGAGGCCACGCTGGAGG | 62.672 | 68.421 | 5.01 | 0.00 | 40.96 | 4.30 |
66 | 67 | 2.125350 | GAAGAGGCCACGCTGGAG | 60.125 | 66.667 | 5.01 | 0.00 | 40.96 | 3.86 |
67 | 68 | 4.069232 | CGAAGAGGCCACGCTGGA | 62.069 | 66.667 | 5.01 | 0.00 | 40.96 | 3.86 |
68 | 69 | 3.589654 | TTCGAAGAGGCCACGCTGG | 62.590 | 63.158 | 5.01 | 0.25 | 38.28 | 4.85 |
69 | 70 | 2.048222 | TTCGAAGAGGCCACGCTG | 60.048 | 61.111 | 5.01 | 0.00 | 38.43 | 5.18 |
70 | 71 | 1.608717 | ATCTTCGAAGAGGCCACGCT | 61.609 | 55.000 | 29.89 | 10.57 | 38.66 | 5.07 |
71 | 72 | 1.153549 | ATCTTCGAAGAGGCCACGC | 60.154 | 57.895 | 29.89 | 0.00 | 38.66 | 5.34 |
72 | 73 | 2.670635 | CATCTTCGAAGAGGCCACG | 58.329 | 57.895 | 29.89 | 12.14 | 38.66 | 4.94 |
77 | 78 | 1.424493 | GCGGTGCATCTTCGAAGAGG | 61.424 | 60.000 | 30.19 | 30.19 | 38.66 | 3.69 |
78 | 79 | 1.746727 | CGCGGTGCATCTTCGAAGAG | 61.747 | 60.000 | 29.89 | 22.11 | 38.66 | 2.85 |
79 | 80 | 1.805539 | CGCGGTGCATCTTCGAAGA | 60.806 | 57.895 | 28.85 | 28.85 | 39.78 | 2.87 |
80 | 81 | 2.697425 | CGCGGTGCATCTTCGAAG | 59.303 | 61.111 | 19.35 | 19.35 | 0.00 | 3.79 |
81 | 82 | 3.487202 | GCGCGGTGCATCTTCGAA | 61.487 | 61.111 | 8.83 | 0.00 | 45.45 | 3.71 |
95 | 96 | 4.774503 | AGCAGAGGAAGCTGGCGC | 62.775 | 66.667 | 0.00 | 0.00 | 41.61 | 6.53 |
96 | 97 | 2.511145 | GAGCAGAGGAAGCTGGCG | 60.511 | 66.667 | 0.00 | 0.00 | 43.58 | 5.69 |
97 | 98 | 2.124778 | GGAGCAGAGGAAGCTGGC | 60.125 | 66.667 | 0.00 | 0.00 | 43.58 | 4.85 |
98 | 99 | 0.392729 | CTTGGAGCAGAGGAAGCTGG | 60.393 | 60.000 | 0.00 | 0.00 | 43.58 | 4.85 |
99 | 100 | 0.324285 | ACTTGGAGCAGAGGAAGCTG | 59.676 | 55.000 | 0.00 | 0.00 | 43.58 | 4.24 |
100 | 101 | 0.612744 | GACTTGGAGCAGAGGAAGCT | 59.387 | 55.000 | 0.00 | 0.00 | 46.82 | 3.74 |
101 | 102 | 0.612744 | AGACTTGGAGCAGAGGAAGC | 59.387 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
102 | 103 | 1.675415 | GCAGACTTGGAGCAGAGGAAG | 60.675 | 57.143 | 0.00 | 0.00 | 0.00 | 3.46 |
103 | 104 | 0.322975 | GCAGACTTGGAGCAGAGGAA | 59.677 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
104 | 105 | 0.543883 | AGCAGACTTGGAGCAGAGGA | 60.544 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
105 | 106 | 0.324285 | AAGCAGACTTGGAGCAGAGG | 59.676 | 55.000 | 0.00 | 0.00 | 33.84 | 3.69 |
106 | 107 | 2.075338 | GAAAGCAGACTTGGAGCAGAG | 58.925 | 52.381 | 0.00 | 0.00 | 35.85 | 3.35 |
107 | 108 | 1.696336 | AGAAAGCAGACTTGGAGCAGA | 59.304 | 47.619 | 0.00 | 0.00 | 35.85 | 4.26 |
108 | 109 | 2.181954 | AGAAAGCAGACTTGGAGCAG | 57.818 | 50.000 | 0.00 | 0.00 | 35.85 | 4.24 |
109 | 110 | 2.498167 | GAAGAAAGCAGACTTGGAGCA | 58.502 | 47.619 | 0.00 | 0.00 | 35.85 | 4.26 |
110 | 111 | 1.809547 | GGAAGAAAGCAGACTTGGAGC | 59.190 | 52.381 | 0.00 | 0.00 | 35.85 | 4.70 |
111 | 112 | 2.072298 | CGGAAGAAAGCAGACTTGGAG | 58.928 | 52.381 | 0.00 | 0.00 | 35.85 | 3.86 |
112 | 113 | 1.691976 | TCGGAAGAAAGCAGACTTGGA | 59.308 | 47.619 | 0.00 | 0.00 | 35.85 | 3.53 |
113 | 114 | 1.801178 | GTCGGAAGAAAGCAGACTTGG | 59.199 | 52.381 | 0.00 | 0.00 | 45.01 | 3.61 |
114 | 115 | 2.483876 | TGTCGGAAGAAAGCAGACTTG | 58.516 | 47.619 | 0.00 | 0.00 | 45.01 | 3.16 |
115 | 116 | 2.910688 | TGTCGGAAGAAAGCAGACTT | 57.089 | 45.000 | 0.00 | 0.00 | 45.01 | 3.01 |
116 | 117 | 2.910688 | TTGTCGGAAGAAAGCAGACT | 57.089 | 45.000 | 0.00 | 0.00 | 45.01 | 3.24 |
117 | 118 | 3.748568 | AGATTTGTCGGAAGAAAGCAGAC | 59.251 | 43.478 | 0.00 | 0.00 | 45.01 | 3.51 |
118 | 119 | 3.997021 | GAGATTTGTCGGAAGAAAGCAGA | 59.003 | 43.478 | 0.00 | 0.00 | 45.01 | 4.26 |
119 | 120 | 3.126000 | GGAGATTTGTCGGAAGAAAGCAG | 59.874 | 47.826 | 0.00 | 0.00 | 45.01 | 4.24 |
120 | 121 | 3.074412 | GGAGATTTGTCGGAAGAAAGCA | 58.926 | 45.455 | 0.00 | 0.00 | 45.01 | 3.91 |
121 | 122 | 2.094417 | CGGAGATTTGTCGGAAGAAAGC | 59.906 | 50.000 | 0.00 | 0.00 | 45.01 | 3.51 |
122 | 123 | 2.094417 | GCGGAGATTTGTCGGAAGAAAG | 59.906 | 50.000 | 0.00 | 0.00 | 45.01 | 2.62 |
123 | 124 | 2.073816 | GCGGAGATTTGTCGGAAGAAA | 58.926 | 47.619 | 0.00 | 0.00 | 45.01 | 2.52 |
124 | 125 | 1.722011 | GCGGAGATTTGTCGGAAGAA | 58.278 | 50.000 | 0.00 | 0.00 | 45.01 | 2.52 |
125 | 126 | 0.457853 | CGCGGAGATTTGTCGGAAGA | 60.458 | 55.000 | 0.00 | 0.00 | 38.16 | 2.87 |
126 | 127 | 0.457853 | TCGCGGAGATTTGTCGGAAG | 60.458 | 55.000 | 6.13 | 0.00 | 0.00 | 3.46 |
127 | 128 | 0.734942 | GTCGCGGAGATTTGTCGGAA | 60.735 | 55.000 | 6.13 | 0.00 | 0.00 | 4.30 |
128 | 129 | 1.153901 | GTCGCGGAGATTTGTCGGA | 60.154 | 57.895 | 6.13 | 0.00 | 0.00 | 4.55 |
129 | 130 | 2.165301 | GGTCGCGGAGATTTGTCGG | 61.165 | 63.158 | 6.13 | 0.00 | 0.00 | 4.79 |
130 | 131 | 0.736325 | AAGGTCGCGGAGATTTGTCG | 60.736 | 55.000 | 6.13 | 0.00 | 0.00 | 4.35 |
131 | 132 | 1.000145 | GAAGGTCGCGGAGATTTGTC | 59.000 | 55.000 | 6.13 | 0.00 | 0.00 | 3.18 |
132 | 133 | 0.736325 | CGAAGGTCGCGGAGATTTGT | 60.736 | 55.000 | 6.13 | 0.00 | 31.14 | 2.83 |
133 | 134 | 1.999051 | CGAAGGTCGCGGAGATTTG | 59.001 | 57.895 | 6.13 | 0.00 | 31.14 | 2.32 |
134 | 135 | 4.496670 | CGAAGGTCGCGGAGATTT | 57.503 | 55.556 | 6.13 | 0.00 | 31.14 | 2.17 |
151 | 152 | 2.959071 | GACGAGATCCGCAGCTGC | 60.959 | 66.667 | 29.12 | 29.12 | 43.32 | 5.25 |
152 | 153 | 1.875813 | GTGACGAGATCCGCAGCTG | 60.876 | 63.158 | 10.11 | 10.11 | 43.32 | 4.24 |
153 | 154 | 2.492090 | GTGACGAGATCCGCAGCT | 59.508 | 61.111 | 0.00 | 0.00 | 43.32 | 4.24 |
154 | 155 | 2.583593 | GGTGACGAGATCCGCAGC | 60.584 | 66.667 | 0.00 | 8.28 | 43.32 | 5.25 |
203 | 204 | 4.020617 | TGCAGGAGTGGAAGGCCG | 62.021 | 66.667 | 0.00 | 0.00 | 36.79 | 6.13 |
204 | 205 | 2.360475 | GTGCAGGAGTGGAAGGCC | 60.360 | 66.667 | 0.00 | 0.00 | 0.00 | 5.19 |
205 | 206 | 2.360475 | GGTGCAGGAGTGGAAGGC | 60.360 | 66.667 | 0.00 | 0.00 | 0.00 | 4.35 |
206 | 207 | 2.046892 | CGGTGCAGGAGTGGAAGG | 60.047 | 66.667 | 0.00 | 0.00 | 0.00 | 3.46 |
207 | 208 | 2.046892 | CCGGTGCAGGAGTGGAAG | 60.047 | 66.667 | 0.00 | 0.00 | 0.00 | 3.46 |
208 | 209 | 2.525629 | TCCGGTGCAGGAGTGGAA | 60.526 | 61.111 | 0.00 | 0.00 | 34.92 | 3.53 |
209 | 210 | 3.311110 | GTCCGGTGCAGGAGTGGA | 61.311 | 66.667 | 0.00 | 0.00 | 41.68 | 4.02 |
210 | 211 | 4.394712 | GGTCCGGTGCAGGAGTGG | 62.395 | 72.222 | 0.00 | 0.00 | 41.68 | 4.00 |
211 | 212 | 4.742201 | CGGTCCGGTGCAGGAGTG | 62.742 | 72.222 | 2.34 | 0.00 | 41.68 | 3.51 |
222 | 223 | 2.049985 | GCAGATCGATCCGGTCCG | 60.050 | 66.667 | 21.66 | 3.60 | 37.77 | 4.79 |
223 | 224 | 0.598680 | CAAGCAGATCGATCCGGTCC | 60.599 | 60.000 | 21.66 | 6.09 | 37.77 | 4.46 |
224 | 225 | 0.103208 | ACAAGCAGATCGATCCGGTC | 59.897 | 55.000 | 21.66 | 8.50 | 37.24 | 4.79 |
225 | 226 | 0.179100 | CACAAGCAGATCGATCCGGT | 60.179 | 55.000 | 21.66 | 14.61 | 0.00 | 5.28 |
226 | 227 | 0.103026 | TCACAAGCAGATCGATCCGG | 59.897 | 55.000 | 21.66 | 15.11 | 0.00 | 5.14 |
227 | 228 | 1.202348 | ACTCACAAGCAGATCGATCCG | 60.202 | 52.381 | 21.66 | 13.13 | 0.00 | 4.18 |
228 | 229 | 2.593346 | ACTCACAAGCAGATCGATCC | 57.407 | 50.000 | 21.66 | 7.65 | 0.00 | 3.36 |
229 | 230 | 3.928992 | TGAAACTCACAAGCAGATCGATC | 59.071 | 43.478 | 17.91 | 17.91 | 0.00 | 3.69 |
230 | 231 | 3.930336 | TGAAACTCACAAGCAGATCGAT | 58.070 | 40.909 | 0.00 | 0.00 | 0.00 | 3.59 |
231 | 232 | 3.385193 | TGAAACTCACAAGCAGATCGA | 57.615 | 42.857 | 0.00 | 0.00 | 0.00 | 3.59 |
232 | 233 | 3.434641 | ACATGAAACTCACAAGCAGATCG | 59.565 | 43.478 | 0.00 | 0.00 | 0.00 | 3.69 |
233 | 234 | 5.368256 | AACATGAAACTCACAAGCAGATC | 57.632 | 39.130 | 0.00 | 0.00 | 0.00 | 2.75 |
234 | 235 | 6.000219 | AGTAACATGAAACTCACAAGCAGAT | 59.000 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
235 | 236 | 5.368145 | AGTAACATGAAACTCACAAGCAGA | 58.632 | 37.500 | 0.00 | 0.00 | 0.00 | 4.26 |
236 | 237 | 5.679734 | AGTAACATGAAACTCACAAGCAG | 57.320 | 39.130 | 0.00 | 0.00 | 0.00 | 4.24 |
237 | 238 | 6.521162 | TCTAGTAACATGAAACTCACAAGCA | 58.479 | 36.000 | 0.00 | 0.00 | 0.00 | 3.91 |
238 | 239 | 7.602517 | ATCTAGTAACATGAAACTCACAAGC | 57.397 | 36.000 | 0.00 | 0.00 | 0.00 | 4.01 |
239 | 240 | 8.376203 | CGAATCTAGTAACATGAAACTCACAAG | 58.624 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
240 | 241 | 8.085909 | TCGAATCTAGTAACATGAAACTCACAA | 58.914 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
241 | 242 | 7.599171 | TCGAATCTAGTAACATGAAACTCACA | 58.401 | 34.615 | 0.00 | 0.00 | 0.00 | 3.58 |
242 | 243 | 8.373992 | GTTCGAATCTAGTAACATGAAACTCAC | 58.626 | 37.037 | 0.00 | 0.00 | 0.00 | 3.51 |
243 | 244 | 8.085909 | TGTTCGAATCTAGTAACATGAAACTCA | 58.914 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
244 | 245 | 8.462143 | TGTTCGAATCTAGTAACATGAAACTC | 57.538 | 34.615 | 0.00 | 0.00 | 0.00 | 3.01 |
245 | 246 | 9.436957 | AATGTTCGAATCTAGTAACATGAAACT | 57.563 | 29.630 | 0.00 | 4.78 | 40.66 | 2.66 |
259 | 260 | 9.681062 | TTCTTCCCTATTAAAATGTTCGAATCT | 57.319 | 29.630 | 0.00 | 0.00 | 0.00 | 2.40 |
270 | 271 | 9.869757 | GCAGCTTTATTTTCTTCCCTATTAAAA | 57.130 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
271 | 272 | 9.255029 | AGCAGCTTTATTTTCTTCCCTATTAAA | 57.745 | 29.630 | 0.00 | 0.00 | 0.00 | 1.52 |
272 | 273 | 8.823220 | AGCAGCTTTATTTTCTTCCCTATTAA | 57.177 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
273 | 274 | 8.052748 | TGAGCAGCTTTATTTTCTTCCCTATTA | 58.947 | 33.333 | 0.00 | 0.00 | 0.00 | 0.98 |
274 | 275 | 6.891908 | TGAGCAGCTTTATTTTCTTCCCTATT | 59.108 | 34.615 | 0.00 | 0.00 | 0.00 | 1.73 |
275 | 276 | 6.319911 | GTGAGCAGCTTTATTTTCTTCCCTAT | 59.680 | 38.462 | 0.00 | 0.00 | 0.00 | 2.57 |
276 | 277 | 5.648092 | GTGAGCAGCTTTATTTTCTTCCCTA | 59.352 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
277 | 278 | 4.460731 | GTGAGCAGCTTTATTTTCTTCCCT | 59.539 | 41.667 | 0.00 | 0.00 | 0.00 | 4.20 |
278 | 279 | 4.460731 | AGTGAGCAGCTTTATTTTCTTCCC | 59.539 | 41.667 | 0.00 | 0.00 | 0.00 | 3.97 |
279 | 280 | 5.635417 | AGTGAGCAGCTTTATTTTCTTCC | 57.365 | 39.130 | 0.00 | 0.00 | 0.00 | 3.46 |
296 | 297 | 5.682943 | AGCTAATCTAACGAGCTAGTGAG | 57.317 | 43.478 | 4.98 | 4.98 | 44.65 | 3.51 |
301 | 302 | 9.069082 | AGAAAATCTAGCTAATCTAACGAGCTA | 57.931 | 33.333 | 0.00 | 3.08 | 44.65 | 3.32 |
303 | 304 | 8.582433 | AAGAAAATCTAGCTAATCTAACGAGC | 57.418 | 34.615 | 0.00 | 0.00 | 36.42 | 5.03 |
313 | 314 | 9.337396 | TCACAAAGTCAAAGAAAATCTAGCTAA | 57.663 | 29.630 | 0.00 | 0.00 | 0.00 | 3.09 |
314 | 315 | 8.902540 | TCACAAAGTCAAAGAAAATCTAGCTA | 57.097 | 30.769 | 0.00 | 0.00 | 0.00 | 3.32 |
315 | 316 | 7.807977 | TCACAAAGTCAAAGAAAATCTAGCT | 57.192 | 32.000 | 0.00 | 0.00 | 0.00 | 3.32 |
316 | 317 | 8.909671 | CAATCACAAAGTCAAAGAAAATCTAGC | 58.090 | 33.333 | 0.00 | 0.00 | 0.00 | 3.42 |
317 | 318 | 9.403110 | CCAATCACAAAGTCAAAGAAAATCTAG | 57.597 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
318 | 319 | 8.912988 | ACCAATCACAAAGTCAAAGAAAATCTA | 58.087 | 29.630 | 0.00 | 0.00 | 0.00 | 1.98 |
319 | 320 | 7.785033 | ACCAATCACAAAGTCAAAGAAAATCT | 58.215 | 30.769 | 0.00 | 0.00 | 0.00 | 2.40 |
320 | 321 | 8.424274 | AACCAATCACAAAGTCAAAGAAAATC | 57.576 | 30.769 | 0.00 | 0.00 | 0.00 | 2.17 |
321 | 322 | 8.667463 | CAAACCAATCACAAAGTCAAAGAAAAT | 58.333 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
322 | 323 | 7.875041 | TCAAACCAATCACAAAGTCAAAGAAAA | 59.125 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
323 | 324 | 7.382110 | TCAAACCAATCACAAAGTCAAAGAAA | 58.618 | 30.769 | 0.00 | 0.00 | 0.00 | 2.52 |
324 | 325 | 6.929625 | TCAAACCAATCACAAAGTCAAAGAA | 58.070 | 32.000 | 0.00 | 0.00 | 0.00 | 2.52 |
325 | 326 | 6.376864 | TCTCAAACCAATCACAAAGTCAAAGA | 59.623 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
326 | 327 | 6.563422 | TCTCAAACCAATCACAAAGTCAAAG | 58.437 | 36.000 | 0.00 | 0.00 | 0.00 | 2.77 |
327 | 328 | 6.522625 | TCTCAAACCAATCACAAAGTCAAA | 57.477 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
328 | 329 | 6.522625 | TTCTCAAACCAATCACAAAGTCAA | 57.477 | 33.333 | 0.00 | 0.00 | 0.00 | 3.18 |
329 | 330 | 5.450412 | GCTTCTCAAACCAATCACAAAGTCA | 60.450 | 40.000 | 0.00 | 0.00 | 0.00 | 3.41 |
330 | 331 | 4.978580 | GCTTCTCAAACCAATCACAAAGTC | 59.021 | 41.667 | 0.00 | 0.00 | 0.00 | 3.01 |
331 | 332 | 4.202151 | GGCTTCTCAAACCAATCACAAAGT | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 2.66 |
332 | 333 | 4.301628 | GGCTTCTCAAACCAATCACAAAG | 58.698 | 43.478 | 0.00 | 0.00 | 0.00 | 2.77 |
333 | 334 | 3.069443 | GGGCTTCTCAAACCAATCACAAA | 59.931 | 43.478 | 0.00 | 0.00 | 0.00 | 2.83 |
334 | 335 | 2.627699 | GGGCTTCTCAAACCAATCACAA | 59.372 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
335 | 336 | 2.158475 | AGGGCTTCTCAAACCAATCACA | 60.158 | 45.455 | 0.00 | 0.00 | 0.00 | 3.58 |
336 | 337 | 2.519013 | AGGGCTTCTCAAACCAATCAC | 58.481 | 47.619 | 0.00 | 0.00 | 0.00 | 3.06 |
337 | 338 | 2.978156 | AGGGCTTCTCAAACCAATCA | 57.022 | 45.000 | 0.00 | 0.00 | 0.00 | 2.57 |
338 | 339 | 5.243954 | AGTTAAAGGGCTTCTCAAACCAATC | 59.756 | 40.000 | 0.00 | 0.00 | 0.00 | 2.67 |
339 | 340 | 5.011023 | CAGTTAAAGGGCTTCTCAAACCAAT | 59.989 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
340 | 341 | 4.340950 | CAGTTAAAGGGCTTCTCAAACCAA | 59.659 | 41.667 | 0.00 | 0.00 | 0.00 | 3.67 |
341 | 342 | 3.888930 | CAGTTAAAGGGCTTCTCAAACCA | 59.111 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
342 | 343 | 4.142038 | TCAGTTAAAGGGCTTCTCAAACC | 58.858 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
343 | 344 | 5.767816 | TTCAGTTAAAGGGCTTCTCAAAC | 57.232 | 39.130 | 0.00 | 0.00 | 0.00 | 2.93 |
344 | 345 | 6.783708 | TTTTCAGTTAAAGGGCTTCTCAAA | 57.216 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
345 | 346 | 6.976934 | ATTTTCAGTTAAAGGGCTTCTCAA | 57.023 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
346 | 347 | 6.976934 | AATTTTCAGTTAAAGGGCTTCTCA | 57.023 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
348 | 349 | 8.967918 | GGTATAATTTTCAGTTAAAGGGCTTCT | 58.032 | 33.333 | 0.00 | 0.00 | 0.00 | 2.85 |
349 | 350 | 7.913821 | CGGTATAATTTTCAGTTAAAGGGCTTC | 59.086 | 37.037 | 0.00 | 0.00 | 0.00 | 3.86 |
350 | 351 | 7.612633 | TCGGTATAATTTTCAGTTAAAGGGCTT | 59.387 | 33.333 | 0.00 | 0.00 | 0.00 | 4.35 |
351 | 352 | 7.114095 | TCGGTATAATTTTCAGTTAAAGGGCT | 58.886 | 34.615 | 0.00 | 0.00 | 0.00 | 5.19 |
352 | 353 | 7.324354 | TCGGTATAATTTTCAGTTAAAGGGC | 57.676 | 36.000 | 0.00 | 0.00 | 0.00 | 5.19 |
353 | 354 | 8.565416 | GGATCGGTATAATTTTCAGTTAAAGGG | 58.435 | 37.037 | 0.00 | 0.00 | 0.00 | 3.95 |
354 | 355 | 9.338622 | AGGATCGGTATAATTTTCAGTTAAAGG | 57.661 | 33.333 | 0.00 | 0.00 | 0.00 | 3.11 |
356 | 357 | 9.893634 | TGAGGATCGGTATAATTTTCAGTTAAA | 57.106 | 29.630 | 0.00 | 0.00 | 38.61 | 1.52 |
362 | 363 | 8.984764 | CGTTTATGAGGATCGGTATAATTTTCA | 58.015 | 33.333 | 0.00 | 0.00 | 38.61 | 2.69 |
363 | 364 | 9.199982 | TCGTTTATGAGGATCGGTATAATTTTC | 57.800 | 33.333 | 0.00 | 0.00 | 38.61 | 2.29 |
364 | 365 | 9.720769 | ATCGTTTATGAGGATCGGTATAATTTT | 57.279 | 29.630 | 0.00 | 0.00 | 38.61 | 1.82 |
365 | 366 | 9.151471 | CATCGTTTATGAGGATCGGTATAATTT | 57.849 | 33.333 | 0.00 | 0.00 | 38.61 | 1.82 |
366 | 367 | 8.311836 | ACATCGTTTATGAGGATCGGTATAATT | 58.688 | 33.333 | 0.00 | 0.00 | 39.07 | 1.40 |
367 | 368 | 7.837863 | ACATCGTTTATGAGGATCGGTATAAT | 58.162 | 34.615 | 0.00 | 0.00 | 39.07 | 1.28 |
368 | 369 | 7.223260 | ACATCGTTTATGAGGATCGGTATAA | 57.777 | 36.000 | 0.00 | 0.00 | 39.07 | 0.98 |
369 | 370 | 6.829229 | ACATCGTTTATGAGGATCGGTATA | 57.171 | 37.500 | 0.00 | 0.00 | 39.07 | 1.47 |
370 | 371 | 5.723672 | ACATCGTTTATGAGGATCGGTAT | 57.276 | 39.130 | 0.00 | 0.00 | 39.07 | 2.73 |
371 | 372 | 5.524971 | AACATCGTTTATGAGGATCGGTA | 57.475 | 39.130 | 0.00 | 0.00 | 39.07 | 4.02 |
372 | 373 | 4.402056 | AACATCGTTTATGAGGATCGGT | 57.598 | 40.909 | 0.00 | 0.00 | 39.07 | 4.69 |
373 | 374 | 4.211374 | GGAAACATCGTTTATGAGGATCGG | 59.789 | 45.833 | 0.00 | 0.00 | 39.07 | 4.18 |
374 | 375 | 4.808895 | TGGAAACATCGTTTATGAGGATCG | 59.191 | 41.667 | 0.00 | 0.00 | 39.07 | 3.69 |
375 | 376 | 6.677781 | TTGGAAACATCGTTTATGAGGATC | 57.322 | 37.500 | 0.00 | 0.00 | 42.32 | 3.36 |
376 | 377 | 6.828273 | TCATTGGAAACATCGTTTATGAGGAT | 59.172 | 34.615 | 0.00 | 0.00 | 42.32 | 3.24 |
377 | 378 | 6.176896 | TCATTGGAAACATCGTTTATGAGGA | 58.823 | 36.000 | 0.00 | 0.00 | 42.32 | 3.71 |
378 | 379 | 6.435430 | TCATTGGAAACATCGTTTATGAGG | 57.565 | 37.500 | 0.00 | 0.00 | 42.32 | 3.86 |
384 | 385 | 9.541143 | AAGTTTTATTCATTGGAAACATCGTTT | 57.459 | 25.926 | 0.00 | 0.00 | 42.32 | 3.60 |
385 | 386 | 9.191995 | GAAGTTTTATTCATTGGAAACATCGTT | 57.808 | 29.630 | 0.00 | 0.00 | 42.32 | 3.85 |
386 | 387 | 8.356657 | TGAAGTTTTATTCATTGGAAACATCGT | 58.643 | 29.630 | 0.00 | 0.00 | 35.57 | 3.73 |
387 | 388 | 8.741101 | TGAAGTTTTATTCATTGGAAACATCG | 57.259 | 30.769 | 0.00 | 0.00 | 35.57 | 3.84 |
388 | 389 | 9.912634 | TCTGAAGTTTTATTCATTGGAAACATC | 57.087 | 29.630 | 0.00 | 0.00 | 38.47 | 3.06 |
389 | 390 | 9.918630 | CTCTGAAGTTTTATTCATTGGAAACAT | 57.081 | 29.630 | 0.00 | 0.00 | 38.47 | 2.71 |
390 | 391 | 8.912988 | ACTCTGAAGTTTTATTCATTGGAAACA | 58.087 | 29.630 | 0.00 | 0.00 | 38.47 | 2.83 |
391 | 392 | 9.750125 | AACTCTGAAGTTTTATTCATTGGAAAC | 57.250 | 29.630 | 0.00 | 0.00 | 43.28 | 2.78 |
425 | 426 | 8.999431 | GGGTTTCAGTTTTTCTTTCTTTCTTTT | 58.001 | 29.630 | 0.00 | 0.00 | 0.00 | 2.27 |
426 | 427 | 7.606456 | GGGGTTTCAGTTTTTCTTTCTTTCTTT | 59.394 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
427 | 428 | 7.038302 | AGGGGTTTCAGTTTTTCTTTCTTTCTT | 60.038 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
428 | 429 | 6.440647 | AGGGGTTTCAGTTTTTCTTTCTTTCT | 59.559 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
429 | 430 | 6.535150 | CAGGGGTTTCAGTTTTTCTTTCTTTC | 59.465 | 38.462 | 0.00 | 0.00 | 0.00 | 2.62 |
430 | 431 | 6.212589 | TCAGGGGTTTCAGTTTTTCTTTCTTT | 59.787 | 34.615 | 0.00 | 0.00 | 0.00 | 2.52 |
431 | 432 | 5.719563 | TCAGGGGTTTCAGTTTTTCTTTCTT | 59.280 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
432 | 433 | 5.269189 | TCAGGGGTTTCAGTTTTTCTTTCT | 58.731 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
433 | 434 | 5.592104 | TCAGGGGTTTCAGTTTTTCTTTC | 57.408 | 39.130 | 0.00 | 0.00 | 0.00 | 2.62 |
434 | 435 | 6.560003 | ATTCAGGGGTTTCAGTTTTTCTTT | 57.440 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
449 | 450 | 4.609301 | TGTTTATTCAGGGAATTCAGGGG | 58.391 | 43.478 | 7.93 | 0.00 | 33.95 | 4.79 |
450 | 451 | 5.509498 | TCTGTTTATTCAGGGAATTCAGGG | 58.491 | 41.667 | 7.93 | 0.00 | 33.95 | 4.45 |
461 | 462 | 8.808529 | AGAATAACGTTCGATCTGTTTATTCAG | 58.191 | 33.333 | 2.82 | 0.00 | 36.85 | 3.02 |
478 | 479 | 9.726232 | GGTGTTTTCTTCTTTTTAGAATAACGT | 57.274 | 29.630 | 0.00 | 0.00 | 32.09 | 3.99 |
506 | 516 | 6.324254 | GCCTTAGATCTGAGACCCTAAAGTTA | 59.676 | 42.308 | 15.79 | 0.00 | 0.00 | 2.24 |
507 | 517 | 5.129650 | GCCTTAGATCTGAGACCCTAAAGTT | 59.870 | 44.000 | 15.79 | 0.00 | 0.00 | 2.66 |
509 | 519 | 4.039852 | GGCCTTAGATCTGAGACCCTAAAG | 59.960 | 50.000 | 15.79 | 2.90 | 0.00 | 1.85 |
512 | 522 | 2.489255 | CGGCCTTAGATCTGAGACCCTA | 60.489 | 54.545 | 15.79 | 0.00 | 0.00 | 3.53 |
517 | 527 | 1.115930 | GGCCGGCCTTAGATCTGAGA | 61.116 | 60.000 | 38.76 | 0.00 | 0.00 | 3.27 |
522 | 532 | 1.227674 | CTGTGGCCGGCCTTAGATC | 60.228 | 63.158 | 43.34 | 25.38 | 36.94 | 2.75 |
538 | 548 | 9.290988 | TGCTAATAGTTCTAGATAAGAGGACTG | 57.709 | 37.037 | 0.00 | 0.00 | 35.05 | 3.51 |
552 | 562 | 2.939103 | CCGCTTGCTTGCTAATAGTTCT | 59.061 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
553 | 563 | 2.678336 | ACCGCTTGCTTGCTAATAGTTC | 59.322 | 45.455 | 0.00 | 0.00 | 0.00 | 3.01 |
555 | 565 | 2.403252 | ACCGCTTGCTTGCTAATAGT | 57.597 | 45.000 | 0.00 | 0.00 | 0.00 | 2.12 |
556 | 566 | 4.776743 | CATAACCGCTTGCTTGCTAATAG | 58.223 | 43.478 | 0.00 | 0.00 | 0.00 | 1.73 |
557 | 567 | 3.003275 | GCATAACCGCTTGCTTGCTAATA | 59.997 | 43.478 | 0.00 | 0.00 | 35.95 | 0.98 |
558 | 568 | 2.223572 | GCATAACCGCTTGCTTGCTAAT | 60.224 | 45.455 | 0.00 | 0.00 | 35.95 | 1.73 |
559 | 569 | 1.132262 | GCATAACCGCTTGCTTGCTAA | 59.868 | 47.619 | 0.00 | 0.00 | 35.95 | 3.09 |
560 | 570 | 0.732571 | GCATAACCGCTTGCTTGCTA | 59.267 | 50.000 | 0.00 | 0.00 | 35.95 | 3.49 |
561 | 571 | 1.243342 | TGCATAACCGCTTGCTTGCT | 61.243 | 50.000 | 0.00 | 0.00 | 39.60 | 3.91 |
562 | 572 | 0.799534 | CTGCATAACCGCTTGCTTGC | 60.800 | 55.000 | 0.00 | 0.00 | 39.60 | 4.01 |
563 | 573 | 0.804364 | TCTGCATAACCGCTTGCTTG | 59.196 | 50.000 | 0.00 | 0.00 | 39.60 | 4.01 |
564 | 574 | 1.470098 | CTTCTGCATAACCGCTTGCTT | 59.530 | 47.619 | 0.00 | 0.00 | 39.60 | 3.91 |
576 | 586 | 1.488393 | GACTAGGGCCTTCTTCTGCAT | 59.512 | 52.381 | 13.45 | 0.00 | 0.00 | 3.96 |
579 | 589 | 1.134551 | GCTGACTAGGGCCTTCTTCTG | 60.135 | 57.143 | 13.45 | 10.95 | 0.00 | 3.02 |
580 | 590 | 1.199615 | GCTGACTAGGGCCTTCTTCT | 58.800 | 55.000 | 13.45 | 0.00 | 0.00 | 2.85 |
581 | 591 | 1.134551 | CAGCTGACTAGGGCCTTCTTC | 60.135 | 57.143 | 13.45 | 6.57 | 0.00 | 2.87 |
582 | 592 | 0.908198 | CAGCTGACTAGGGCCTTCTT | 59.092 | 55.000 | 13.45 | 0.00 | 0.00 | 2.52 |
609 | 619 | 4.094294 | ACACCGTACATGCAACACAATATC | 59.906 | 41.667 | 0.00 | 0.00 | 0.00 | 1.63 |
614 | 624 | 0.940833 | CACACCGTACATGCAACACA | 59.059 | 50.000 | 0.00 | 0.00 | 0.00 | 3.72 |
630 | 640 | 0.108662 | CATCTGCTCGCCAGTACACA | 60.109 | 55.000 | 0.00 | 0.00 | 42.38 | 3.72 |
637 | 647 | 2.124983 | GGCTTCATCTGCTCGCCA | 60.125 | 61.111 | 0.00 | 0.00 | 40.41 | 5.69 |
672 | 701 | 2.055100 | GACGCTCTCAACTCACTCAAC | 58.945 | 52.381 | 0.00 | 0.00 | 0.00 | 3.18 |
673 | 702 | 1.335051 | CGACGCTCTCAACTCACTCAA | 60.335 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
674 | 703 | 0.238553 | CGACGCTCTCAACTCACTCA | 59.761 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
738 | 768 | 2.946988 | ATCGAATCGCTGGGAGGGGA | 62.947 | 60.000 | 0.00 | 0.00 | 0.00 | 4.81 |
739 | 769 | 2.511452 | ATCGAATCGCTGGGAGGGG | 61.511 | 63.158 | 0.00 | 0.00 | 0.00 | 4.79 |
740 | 770 | 1.301244 | CATCGAATCGCTGGGAGGG | 60.301 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
741 | 771 | 1.301244 | CCATCGAATCGCTGGGAGG | 60.301 | 63.158 | 16.86 | 0.00 | 39.15 | 4.30 |
742 | 772 | 0.598680 | GTCCATCGAATCGCTGGGAG | 60.599 | 60.000 | 22.95 | 0.75 | 42.45 | 4.30 |
743 | 773 | 1.441729 | GTCCATCGAATCGCTGGGA | 59.558 | 57.895 | 22.95 | 14.19 | 42.45 | 4.37 |
744 | 774 | 1.951130 | CGTCCATCGAATCGCTGGG | 60.951 | 63.158 | 22.95 | 12.23 | 42.45 | 4.45 |
745 | 775 | 1.951130 | CCGTCCATCGAATCGCTGG | 60.951 | 63.158 | 18.34 | 18.34 | 43.38 | 4.85 |
746 | 776 | 0.319040 | ATCCGTCCATCGAATCGCTG | 60.319 | 55.000 | 0.00 | 0.00 | 42.86 | 5.18 |
761 | 791 | 3.361158 | TGCCGTTGGTTGCATCCG | 61.361 | 61.111 | 9.25 | 0.00 | 31.31 | 4.18 |
763 | 793 | 1.371635 | GTGTGCCGTTGGTTGCATC | 60.372 | 57.895 | 0.00 | 0.00 | 40.07 | 3.91 |
764 | 794 | 1.391157 | AAGTGTGCCGTTGGTTGCAT | 61.391 | 50.000 | 0.00 | 0.00 | 40.07 | 3.96 |
765 | 795 | 0.748367 | TAAGTGTGCCGTTGGTTGCA | 60.748 | 50.000 | 0.00 | 0.00 | 34.54 | 4.08 |
766 | 796 | 0.596082 | ATAAGTGTGCCGTTGGTTGC | 59.404 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
767 | 797 | 3.749088 | TCTTATAAGTGTGCCGTTGGTTG | 59.251 | 43.478 | 12.19 | 0.00 | 0.00 | 3.77 |
768 | 798 | 4.010667 | TCTTATAAGTGTGCCGTTGGTT | 57.989 | 40.909 | 12.19 | 0.00 | 0.00 | 3.67 |
769 | 799 | 3.688694 | TCTTATAAGTGTGCCGTTGGT | 57.311 | 42.857 | 12.19 | 0.00 | 0.00 | 3.67 |
770 | 800 | 3.181510 | GCTTCTTATAAGTGTGCCGTTGG | 60.182 | 47.826 | 12.19 | 0.00 | 0.00 | 3.77 |
1593 | 1675 | 1.202758 | TGGTTCACGAAGTTGCTCCAT | 60.203 | 47.619 | 0.00 | 0.00 | 41.61 | 3.41 |
1786 | 1883 | 3.647771 | GACCTTCCCCTTGGCGGT | 61.648 | 66.667 | 0.00 | 0.00 | 37.71 | 5.68 |
2140 | 2241 | 1.896220 | TTGAGAGTTGCCATGTGGTC | 58.104 | 50.000 | 0.35 | 0.00 | 37.57 | 4.02 |
2179 | 2290 | 8.806429 | TTAATCATCGATTTGGCACCATATAT | 57.194 | 30.769 | 0.00 | 0.00 | 33.95 | 0.86 |
2180 | 2291 | 8.806429 | ATTAATCATCGATTTGGCACCATATA | 57.194 | 30.769 | 0.00 | 0.00 | 33.95 | 0.86 |
2188 | 2299 | 7.072177 | TCCGATTATTAATCATCGATTTGGC | 57.928 | 36.000 | 26.10 | 0.00 | 44.18 | 4.52 |
2225 | 2336 | 2.759783 | CAGGTCACCTGCGAATGAG | 58.240 | 57.895 | 12.03 | 0.00 | 45.13 | 2.90 |
2301 | 2412 | 2.359850 | TTGGGCATGCTCGACACC | 60.360 | 61.111 | 18.92 | 9.61 | 0.00 | 4.16 |
2430 | 2541 | 4.885270 | TGGTGGTGGCCGTGGTTG | 62.885 | 66.667 | 0.00 | 0.00 | 0.00 | 3.77 |
2431 | 2542 | 3.860930 | GATGGTGGTGGCCGTGGTT | 62.861 | 63.158 | 0.00 | 0.00 | 0.00 | 3.67 |
2432 | 2543 | 4.344865 | GATGGTGGTGGCCGTGGT | 62.345 | 66.667 | 0.00 | 0.00 | 0.00 | 4.16 |
2433 | 2544 | 4.343323 | TGATGGTGGTGGCCGTGG | 62.343 | 66.667 | 0.00 | 0.00 | 0.00 | 4.94 |
2434 | 2545 | 2.747460 | CTGATGGTGGTGGCCGTG | 60.747 | 66.667 | 0.00 | 0.00 | 0.00 | 4.94 |
2435 | 2546 | 4.722700 | GCTGATGGTGGTGGCCGT | 62.723 | 66.667 | 0.00 | 0.00 | 0.00 | 5.68 |
2891 | 3008 | 4.344865 | GGTTGGGCGCCTTCTCCA | 62.345 | 66.667 | 28.56 | 12.88 | 0.00 | 3.86 |
3129 | 3249 | 1.638467 | GAACATCTCCGACATGCGC | 59.362 | 57.895 | 0.00 | 0.00 | 39.11 | 6.09 |
3253 | 3373 | 6.088016 | TCAATGATTTCAAGTGGAGTTTGG | 57.912 | 37.500 | 0.00 | 0.00 | 0.00 | 3.28 |
3255 | 3375 | 7.232127 | AGTGATCAATGATTTCAAGTGGAGTTT | 59.768 | 33.333 | 0.00 | 0.00 | 0.00 | 2.66 |
3285 | 3405 | 6.487960 | GTCTCAGCTCAAGAATTCATTCATG | 58.512 | 40.000 | 8.44 | 0.81 | 39.23 | 3.07 |
3301 | 3421 | 2.820059 | TTCAACATCACGTCTCAGCT | 57.180 | 45.000 | 0.00 | 0.00 | 0.00 | 4.24 |
3307 | 3427 | 2.658325 | GCTGCAAATTCAACATCACGTC | 59.342 | 45.455 | 0.00 | 0.00 | 0.00 | 4.34 |
3309 | 3429 | 1.645265 | CGCTGCAAATTCAACATCACG | 59.355 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
3310 | 3430 | 1.387756 | GCGCTGCAAATTCAACATCAC | 59.612 | 47.619 | 0.00 | 0.00 | 0.00 | 3.06 |
3311 | 3431 | 1.700523 | GCGCTGCAAATTCAACATCA | 58.299 | 45.000 | 0.00 | 0.00 | 0.00 | 3.07 |
3314 | 3434 | 0.248825 | AACGCGCTGCAAATTCAACA | 60.249 | 45.000 | 5.73 | 0.00 | 0.00 | 3.33 |
3388 | 3508 | 1.600058 | TCATTCATTCTCAGCCCCCT | 58.400 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3405 | 3525 | 1.338960 | TGATGATTGTCCGCTGCTTCA | 60.339 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
3412 | 3532 | 1.195448 | CGGCTAATGATGATTGTCCGC | 59.805 | 52.381 | 6.69 | 0.00 | 33.77 | 5.54 |
3413 | 3533 | 2.754472 | TCGGCTAATGATGATTGTCCG | 58.246 | 47.619 | 11.42 | 11.42 | 38.28 | 4.79 |
3414 | 3534 | 6.428159 | AGTTATTCGGCTAATGATGATTGTCC | 59.572 | 38.462 | 0.00 | 0.00 | 0.00 | 4.02 |
3415 | 3535 | 7.426929 | AGTTATTCGGCTAATGATGATTGTC | 57.573 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3416 | 3536 | 7.807977 | AAGTTATTCGGCTAATGATGATTGT | 57.192 | 32.000 | 0.00 | 0.00 | 0.00 | 2.71 |
3417 | 3537 | 8.446273 | CCTAAGTTATTCGGCTAATGATGATTG | 58.554 | 37.037 | 0.00 | 0.00 | 0.00 | 2.67 |
3422 | 3542 | 6.231211 | CCACCTAAGTTATTCGGCTAATGAT | 58.769 | 40.000 | 0.00 | 0.00 | 0.00 | 2.45 |
3445 | 3565 | 3.140814 | GACTTGGAATGGCCGGCC | 61.141 | 66.667 | 39.40 | 39.40 | 40.66 | 6.13 |
3468 | 3589 | 0.249322 | GTCCGGCTTATTGCTCGCTA | 60.249 | 55.000 | 0.00 | 0.00 | 42.39 | 4.26 |
3686 | 3814 | 4.260609 | AGATCCGCGGCATGCCAT | 62.261 | 61.111 | 34.93 | 21.44 | 42.08 | 4.40 |
3689 | 3817 | 4.615815 | AGGAGATCCGCGGCATGC | 62.616 | 66.667 | 23.51 | 9.90 | 42.08 | 4.06 |
3690 | 3818 | 2.356793 | GAGGAGATCCGCGGCATG | 60.357 | 66.667 | 23.51 | 0.00 | 42.08 | 4.06 |
3691 | 3819 | 1.690219 | AAAGAGGAGATCCGCGGCAT | 61.690 | 55.000 | 23.51 | 15.30 | 40.98 | 4.40 |
3692 | 3820 | 1.899437 | AAAAGAGGAGATCCGCGGCA | 61.899 | 55.000 | 23.51 | 10.36 | 40.98 | 5.69 |
3693 | 3821 | 0.744771 | AAAAAGAGGAGATCCGCGGC | 60.745 | 55.000 | 23.51 | 7.63 | 40.98 | 6.53 |
3694 | 3822 | 2.596904 | TAAAAAGAGGAGATCCGCGG | 57.403 | 50.000 | 22.12 | 22.12 | 40.98 | 6.46 |
3695 | 3823 | 4.318121 | CGAAATAAAAAGAGGAGATCCGCG | 60.318 | 45.833 | 0.00 | 0.00 | 40.98 | 6.46 |
3696 | 3824 | 4.552961 | GCGAAATAAAAAGAGGAGATCCGC | 60.553 | 45.833 | 0.00 | 0.00 | 42.08 | 5.54 |
3697 | 3825 | 4.811557 | AGCGAAATAAAAAGAGGAGATCCG | 59.188 | 41.667 | 0.00 | 0.00 | 42.08 | 4.18 |
3698 | 3826 | 5.817816 | TCAGCGAAATAAAAAGAGGAGATCC | 59.182 | 40.000 | 0.00 | 0.00 | 0.00 | 3.36 |
3699 | 3827 | 6.536941 | ACTCAGCGAAATAAAAAGAGGAGATC | 59.463 | 38.462 | 0.00 | 0.00 | 0.00 | 2.75 |
3700 | 3828 | 6.410540 | ACTCAGCGAAATAAAAAGAGGAGAT | 58.589 | 36.000 | 0.00 | 0.00 | 0.00 | 2.75 |
3701 | 3829 | 5.794894 | ACTCAGCGAAATAAAAAGAGGAGA | 58.205 | 37.500 | 0.00 | 0.00 | 0.00 | 3.71 |
3702 | 3830 | 5.064071 | GGACTCAGCGAAATAAAAAGAGGAG | 59.936 | 44.000 | 0.00 | 0.00 | 0.00 | 3.69 |
3703 | 3831 | 4.935808 | GGACTCAGCGAAATAAAAAGAGGA | 59.064 | 41.667 | 0.00 | 0.00 | 0.00 | 3.71 |
3704 | 3832 | 4.201724 | CGGACTCAGCGAAATAAAAAGAGG | 60.202 | 45.833 | 0.00 | 0.00 | 0.00 | 3.69 |
3705 | 3833 | 4.389077 | ACGGACTCAGCGAAATAAAAAGAG | 59.611 | 41.667 | 0.00 | 0.00 | 0.00 | 2.85 |
3706 | 3834 | 4.312443 | ACGGACTCAGCGAAATAAAAAGA | 58.688 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
3707 | 3835 | 4.151689 | TGACGGACTCAGCGAAATAAAAAG | 59.848 | 41.667 | 0.00 | 0.00 | 0.00 | 2.27 |
3710 | 3838 | 3.057104 | TCTGACGGACTCAGCGAAATAAA | 60.057 | 43.478 | 0.00 | 0.00 | 45.64 | 1.40 |
3722 | 3850 | 3.055530 | AGCATTCAATTCTCTGACGGACT | 60.056 | 43.478 | 0.00 | 0.00 | 0.00 | 3.85 |
3724 | 3852 | 3.196469 | AGAGCATTCAATTCTCTGACGGA | 59.804 | 43.478 | 0.00 | 0.00 | 35.99 | 4.69 |
3777 | 3907 | 3.948719 | TCTGGTGGACCGGTTGGC | 61.949 | 66.667 | 9.42 | 1.03 | 43.01 | 4.52 |
3778 | 3908 | 2.032071 | GTCTGGTGGACCGGTTGG | 59.968 | 66.667 | 9.42 | 0.00 | 43.01 | 3.77 |
3785 | 3915 | 1.229209 | TCCCTCTGGTCTGGTGGAC | 60.229 | 63.158 | 0.00 | 0.00 | 43.79 | 4.02 |
3786 | 3916 | 1.229209 | GTCCCTCTGGTCTGGTGGA | 60.229 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
3787 | 3917 | 1.127567 | TTGTCCCTCTGGTCTGGTGG | 61.128 | 60.000 | 0.00 | 0.00 | 0.00 | 4.61 |
3788 | 3918 | 0.322975 | CTTGTCCCTCTGGTCTGGTG | 59.677 | 60.000 | 0.00 | 0.00 | 0.00 | 4.17 |
3789 | 3919 | 1.484444 | GCTTGTCCCTCTGGTCTGGT | 61.484 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3790 | 3920 | 1.197430 | AGCTTGTCCCTCTGGTCTGG | 61.197 | 60.000 | 0.00 | 0.00 | 0.00 | 3.86 |
3791 | 3921 | 0.248843 | GAGCTTGTCCCTCTGGTCTG | 59.751 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3792 | 3922 | 0.178921 | TGAGCTTGTCCCTCTGGTCT | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
3793 | 3923 | 0.908198 | ATGAGCTTGTCCCTCTGGTC | 59.092 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3794 | 3924 | 0.908198 | GATGAGCTTGTCCCTCTGGT | 59.092 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3824 | 3955 | 4.922692 | CACAAATTTCATTTAAGCCTGCGA | 59.077 | 37.500 | 0.00 | 0.00 | 0.00 | 5.10 |
3825 | 3956 | 4.434593 | GCACAAATTTCATTTAAGCCTGCG | 60.435 | 41.667 | 0.00 | 0.00 | 0.00 | 5.18 |
3883 | 4014 | 2.515523 | CAGAATCGGCAGGGCAGG | 60.516 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
3884 | 4015 | 1.523258 | CTCAGAATCGGCAGGGCAG | 60.523 | 63.158 | 0.00 | 0.00 | 0.00 | 4.85 |
3885 | 4016 | 2.244117 | GACTCAGAATCGGCAGGGCA | 62.244 | 60.000 | 0.00 | 0.00 | 0.00 | 5.36 |
3886 | 4017 | 1.522580 | GACTCAGAATCGGCAGGGC | 60.523 | 63.158 | 0.00 | 0.00 | 0.00 | 5.19 |
3895 | 4027 | 0.534412 | CGGAGCCAGTGACTCAGAAT | 59.466 | 55.000 | 8.81 | 0.00 | 35.79 | 2.40 |
3902 | 4034 | 2.948720 | AAGAGCCGGAGCCAGTGAC | 61.949 | 63.158 | 5.05 | 0.00 | 41.25 | 3.67 |
3944 | 4076 | 0.945813 | AGAGCAGAGATACGTACGCC | 59.054 | 55.000 | 16.72 | 4.93 | 0.00 | 5.68 |
4089 | 4232 | 8.970020 | GTCCATCTCATCATCTCATAGAGTATT | 58.030 | 37.037 | 0.00 | 0.00 | 0.00 | 1.89 |
4097 | 4240 | 4.952071 | AACGTCCATCTCATCATCTCAT | 57.048 | 40.909 | 0.00 | 0.00 | 0.00 | 2.90 |
4098 | 4241 | 4.160252 | TGAAACGTCCATCTCATCATCTCA | 59.840 | 41.667 | 0.00 | 0.00 | 0.00 | 3.27 |
4099 | 4242 | 4.686972 | TGAAACGTCCATCTCATCATCTC | 58.313 | 43.478 | 0.00 | 0.00 | 0.00 | 2.75 |
4100 | 4243 | 4.743057 | TGAAACGTCCATCTCATCATCT | 57.257 | 40.909 | 0.00 | 0.00 | 0.00 | 2.90 |
4101 | 4244 | 5.295950 | AGATGAAACGTCCATCTCATCATC | 58.704 | 41.667 | 20.94 | 14.23 | 45.36 | 2.92 |
4102 | 4245 | 5.287674 | AGATGAAACGTCCATCTCATCAT | 57.712 | 39.130 | 20.94 | 8.08 | 45.36 | 2.45 |
4103 | 4246 | 4.743057 | AGATGAAACGTCCATCTCATCA | 57.257 | 40.909 | 20.94 | 4.40 | 45.36 | 3.07 |
4104 | 4247 | 5.463724 | GGTTAGATGAAACGTCCATCTCATC | 59.536 | 44.000 | 26.57 | 19.49 | 45.36 | 2.92 |
4196 | 4343 | 0.465460 | TGCGCAGGGAATAATGGGTC | 60.465 | 55.000 | 5.66 | 0.00 | 0.00 | 4.46 |
4261 | 4408 | 6.431234 | AGTGCACAAAGGAAAGGAAATACTAG | 59.569 | 38.462 | 21.04 | 0.00 | 0.00 | 2.57 |
4262 | 4409 | 6.206634 | CAGTGCACAAAGGAAAGGAAATACTA | 59.793 | 38.462 | 21.04 | 0.00 | 0.00 | 1.82 |
4263 | 4410 | 5.010012 | CAGTGCACAAAGGAAAGGAAATACT | 59.990 | 40.000 | 21.04 | 0.00 | 0.00 | 2.12 |
4280 | 4427 | 1.002033 | CCTCTGTTTTCAGCAGTGCAC | 60.002 | 52.381 | 19.20 | 9.40 | 46.59 | 4.57 |
4301 | 4448 | 2.287457 | GATACGTGCGCCAGTGGGTA | 62.287 | 60.000 | 12.15 | 4.45 | 36.17 | 3.69 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.