Multiple sequence alignment - TraesCS2D01G375700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G375700 chr2D 100.000 4674 0 0 1 4674 480163884 480159211 0.000000e+00 8632.0
1 TraesCS2D01G375700 chr2D 89.352 432 40 3 3274 3704 480132865 480132439 5.320000e-149 538.0
2 TraesCS2D01G375700 chr2D 88.941 425 45 2 2085 2508 480137484 480137061 1.490000e-144 523.0
3 TraesCS2D01G375700 chr2D 89.344 366 36 1 961 1323 480138972 480138607 1.530000e-124 457.0
4 TraesCS2D01G375700 chr2D 85.542 415 49 7 1515 1926 480138382 480137976 1.550000e-114 424.0
5 TraesCS2D01G375700 chr2D 91.908 173 12 2 562 734 526525122 526524952 1.680000e-59 241.0
6 TraesCS2D01G375700 chr2D 91.667 168 13 1 2659 2825 480133216 480133049 1.010000e-56 231.0
7 TraesCS2D01G375700 chr2D 88.462 78 5 2 2853 2926 572138520 572138597 1.790000e-14 91.6
8 TraesCS2D01G375700 chr2D 89.831 59 5 1 4429 4486 81946432 81946374 1.800000e-09 75.0
9 TraesCS2D01G375700 chr2A 93.358 1927 84 20 3 1904 622698057 622696150 0.000000e+00 2809.0
10 TraesCS2D01G375700 chr2A 91.822 807 49 8 3256 4060 622694355 622693564 0.000000e+00 1109.0
11 TraesCS2D01G375700 chr2A 92.463 544 39 2 2113 2655 622695655 622695113 0.000000e+00 776.0
12 TraesCS2D01G375700 chr2A 89.095 431 47 0 3274 3704 622457763 622457333 1.910000e-148 536.0
13 TraesCS2D01G375700 chr2A 86.345 476 59 3 2085 2554 622462187 622461712 8.970000e-142 514.0
14 TraesCS2D01G375700 chr2A 89.891 366 34 3 961 1323 622463542 622463177 7.080000e-128 468.0
15 TraesCS2D01G375700 chr2A 85.024 414 53 6 1515 1926 622462915 622462509 3.370000e-111 412.0
16 TraesCS2D01G375700 chr2A 92.965 199 11 1 2656 2854 622694937 622694742 2.130000e-73 287.0
17 TraesCS2D01G375700 chr2A 92.899 169 10 2 2657 2825 622458117 622457951 1.300000e-60 244.0
18 TraesCS2D01G375700 chr2A 95.122 82 3 1 4585 4666 622693086 622693006 1.370000e-25 128.0
19 TraesCS2D01G375700 chr2A 85.393 89 5 6 4487 4567 622693587 622693499 8.330000e-13 86.1
20 TraesCS2D01G375700 chr2B 91.118 1002 59 15 785 1773 563027874 563026890 0.000000e+00 1330.0
21 TraesCS2D01G375700 chr2B 96.019 628 25 0 1923 2550 563026803 563026176 0.000000e+00 1022.0
22 TraesCS2D01G375700 chr2B 91.172 725 44 16 3230 3947 563025397 563024686 0.000000e+00 966.0
23 TraesCS2D01G375700 chr2B 92.351 536 32 2 28 562 563028703 563028176 0.000000e+00 754.0
24 TraesCS2D01G375700 chr2B 88.421 475 52 1 3224 3698 562979174 562978703 1.890000e-158 569.0
25 TraesCS2D01G375700 chr2B 98.442 321 5 0 2534 2854 563026157 563025837 2.440000e-157 566.0
26 TraesCS2D01G375700 chr2B 87.657 478 55 2 961 1434 562982403 562981926 1.900000e-153 553.0
27 TraesCS2D01G375700 chr2B 87.212 477 53 5 2085 2554 562980736 562980261 1.910000e-148 536.0
28 TraesCS2D01G375700 chr2B 95.349 301 12 2 2915 3214 563025842 563025543 1.180000e-130 477.0
29 TraesCS2D01G375700 chr2B 80.376 372 71 2 4045 4414 655654400 655654771 9.900000e-72 281.0
30 TraesCS2D01G375700 chr2B 88.837 215 21 2 1515 1728 562981772 562981560 1.290000e-65 261.0
31 TraesCS2D01G375700 chr2B 89.286 196 18 1 2659 2854 562979647 562979455 4.670000e-60 243.0
32 TraesCS2D01G375700 chr2B 90.805 174 12 4 563 734 769078169 769077998 3.640000e-56 230.0
33 TraesCS2D01G375700 chr2B 98.611 72 1 0 1 72 563028772 563028701 1.370000e-25 128.0
34 TraesCS2D01G375700 chr2B 93.182 44 2 1 3981 4023 563024570 563024527 3.900000e-06 63.9
35 TraesCS2D01G375700 chr6B 80.180 444 76 7 4045 4486 62405810 62406243 5.830000e-84 322.0
36 TraesCS2D01G375700 chr6B 100.000 32 0 0 4457 4488 634581235 634581204 5.050000e-05 60.2
37 TraesCS2D01G375700 chr4D 79.814 431 77 7 4053 4480 497089342 497088919 5.880000e-79 305.0
38 TraesCS2D01G375700 chr4D 81.053 95 16 1 4394 4488 493973653 493973745 1.800000e-09 75.0
39 TraesCS2D01G375700 chr4D 92.105 38 2 1 4450 4486 327851960 327851923 8.000000e-03 52.8
40 TraesCS2D01G375700 chr6D 80.097 412 73 6 4049 4456 357725213 357725619 9.830000e-77 298.0
41 TraesCS2D01G375700 chr6D 85.824 261 36 1 4140 4399 421638611 421638351 4.610000e-70 276.0
42 TraesCS2D01G375700 chr6D 100.000 39 0 0 4450 4488 421638612 421638650 6.490000e-09 73.1
43 TraesCS2D01G375700 chr3D 82.462 325 50 6 4042 4362 611886933 611887254 1.280000e-70 278.0
44 TraesCS2D01G375700 chr3D 90.341 176 13 4 554 728 473420825 473420997 1.310000e-55 228.0
45 TraesCS2D01G375700 chr1B 78.199 422 85 6 4045 4463 36594318 36593901 3.590000e-66 263.0
46 TraesCS2D01G375700 chr1B 78.199 422 85 6 4045 4463 36617654 36617237 3.590000e-66 263.0
47 TraesCS2D01G375700 chr1B 77.251 422 85 9 4045 4463 36555459 36555046 2.170000e-58 237.0
48 TraesCS2D01G375700 chr5A 93.373 166 9 2 563 728 467400017 467400180 1.300000e-60 244.0
49 TraesCS2D01G375700 chr5A 91.176 68 3 1 2852 2919 606902088 606902152 6.440000e-14 89.8
50 TraesCS2D01G375700 chr5D 92.216 167 11 2 563 729 322370166 322370002 7.820000e-58 235.0
51 TraesCS2D01G375700 chr6A 90.055 181 16 2 555 734 97802515 97802694 2.810000e-57 233.0
52 TraesCS2D01G375700 chr6A 75.439 456 84 16 4048 4479 76710502 76710051 3.690000e-46 196.0
53 TraesCS2D01G375700 chr6A 95.946 74 0 1 2852 2922 18885631 18885704 2.950000e-22 117.0
54 TraesCS2D01G375700 chr6A 91.667 72 4 1 2848 2919 1890614 1890683 1.070000e-16 99.0
55 TraesCS2D01G375700 chr3A 78.167 371 78 3 4044 4413 460154490 460154858 2.810000e-57 233.0
56 TraesCS2D01G375700 chr3A 93.939 66 4 0 2854 2919 65461380 65461445 2.980000e-17 100.0
57 TraesCS2D01G375700 chr7A 90.449 178 10 5 554 728 580506695 580506868 1.310000e-55 228.0
58 TraesCS2D01G375700 chr7A 91.667 72 3 2 2853 2923 16421060 16421129 3.850000e-16 97.1
59 TraesCS2D01G375700 chr7A 87.273 55 7 0 4434 4488 602074047 602073993 3.900000e-06 63.9
60 TraesCS2D01G375700 chr7A 94.872 39 2 0 4451 4489 48477972 48477934 1.400000e-05 62.1
61 TraesCS2D01G375700 chr5B 91.124 169 13 2 563 731 294096604 294096438 1.310000e-55 228.0
62 TraesCS2D01G375700 chr5B 91.176 68 5 1 2853 2919 344298005 344297938 1.790000e-14 91.6
63 TraesCS2D01G375700 chr5B 75.497 151 32 3 4337 4486 72628126 72627980 8.390000e-08 69.4
64 TraesCS2D01G375700 chr1D 95.714 70 2 1 2852 2920 478431221 478431290 1.370000e-20 111.0
65 TraesCS2D01G375700 chr1D 93.939 66 3 1 2853 2918 413583641 413583577 1.070000e-16 99.0
66 TraesCS2D01G375700 chr1D 77.778 135 14 10 3819 3945 486446927 486446801 8.390000e-08 69.4
67 TraesCS2D01G375700 chr3B 86.792 53 7 0 4434 4486 809770714 809770662 5.050000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G375700 chr2D 480159211 480163884 4673 True 8632.0000 8632 100.000000 1 4674 1 chr2D.!!$R2 4673
1 TraesCS2D01G375700 chr2D 480132439 480138972 6533 True 434.6000 538 88.969200 961 3704 5 chr2D.!!$R4 2743
2 TraesCS2D01G375700 chr2A 622693006 622698057 5051 True 865.8500 2809 91.853833 3 4666 6 chr2A.!!$R2 4663
3 TraesCS2D01G375700 chr2A 622457333 622463542 6209 True 434.8000 536 88.650800 961 3704 5 chr2A.!!$R1 2743
4 TraesCS2D01G375700 chr2B 563024527 563028772 4245 True 663.3625 1330 94.530500 1 4023 8 chr2B.!!$R3 4022
5 TraesCS2D01G375700 chr2B 562978703 562982403 3700 True 432.4000 569 88.282600 961 3698 5 chr2B.!!$R2 2737

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
981 1145 0.523966 CTCCGTCAACGAGAGCTTCT 59.476 55.000 3.71 0.00 43.02 2.85 F
1525 1759 1.135139 TGTCTCTTGCTGTCGGATAGC 59.865 52.381 18.52 18.52 41.49 2.97 F
1692 1971 1.153823 GCAAAGCTGCTGCATGAGG 60.154 57.895 18.42 3.67 45.74 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2580 7294 0.244721 GCATTTCAGGTGCCACTTCC 59.755 55.0 0.00 0.0 36.61 3.46 R
2851 7752 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.0 0.00 0.0 0.00 2.73 R
3690 8801 0.391130 TTGCTCTTACCGCGAATGCT 60.391 50.0 8.23 0.0 39.65 3.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
162 205 4.782019 TTCCCATTGAATGAAACCTTCG 57.218 40.909 6.76 0.00 0.00 3.79
327 370 2.341846 AACAACATTCCACACCGAGT 57.658 45.000 0.00 0.00 0.00 4.18
412 456 3.843027 ACTTGAGATCAGAGTGGGATGTT 59.157 43.478 0.00 0.00 0.00 2.71
434 478 1.378514 GGAATGCTTCGGGCCTTCA 60.379 57.895 0.84 0.00 43.94 3.02
450 494 4.261614 GGCCTTCAGTAGTTTTGTTTCTGG 60.262 45.833 0.00 0.00 0.00 3.86
584 628 3.588569 ACTCCCTCCGCTTCCTAAATAT 58.411 45.455 0.00 0.00 0.00 1.28
585 629 4.748701 ACTCCCTCCGCTTCCTAAATATA 58.251 43.478 0.00 0.00 0.00 0.86
639 689 9.557338 GACTACATTTGGATGTATATAGACGAC 57.443 37.037 0.00 0.00 45.20 4.34
675 725 9.851686 ATAAGTTCACTCATTTTGCTCCATATA 57.148 29.630 0.00 0.00 0.00 0.86
775 934 4.767409 AGTACTGTCATTAGCTGTGAGTGA 59.233 41.667 0.00 0.00 0.00 3.41
829 988 1.728971 GTGGTTCATTCAGCTCACTCG 59.271 52.381 0.00 0.00 0.00 4.18
917 1079 1.731160 CTGCTCCTTTTCTTGCTCTCG 59.269 52.381 0.00 0.00 0.00 4.04
937 1099 3.123804 CGGGGTGATTCATTCGTCTTAG 58.876 50.000 0.00 0.00 0.00 2.18
981 1145 0.523966 CTCCGTCAACGAGAGCTTCT 59.476 55.000 3.71 0.00 43.02 2.85
1047 1217 1.674651 CGTCGTCCTCCTCTCCACA 60.675 63.158 0.00 0.00 0.00 4.17
1050 1220 1.979155 CGTCCTCCTCTCCACAGCA 60.979 63.158 0.00 0.00 0.00 4.41
1114 1284 1.519455 CGAGACTGGATTGTCGGCC 60.519 63.158 0.00 0.00 41.47 6.13
1516 1750 3.103447 TCTTGTGACTGTCTCTTGCTG 57.897 47.619 9.51 0.00 0.00 4.41
1525 1759 1.135139 TGTCTCTTGCTGTCGGATAGC 59.865 52.381 18.52 18.52 41.49 2.97
1580 1859 2.918345 TTGTGCGCACTTGGGATGC 61.918 57.895 37.59 11.93 39.81 3.91
1692 1971 1.153823 GCAAAGCTGCTGCATGAGG 60.154 57.895 18.42 3.67 45.74 3.86
1722 2001 2.421424 CAGCTTAAGGTGAGTGATTGCC 59.579 50.000 26.83 0.00 45.66 4.52
1747 2277 4.127171 TGGTTCTGCTCTAAGTTTGACAC 58.873 43.478 0.00 0.00 0.00 3.67
1752 2282 6.545504 TCTGCTCTAAGTTTGACACAATTC 57.454 37.500 0.00 0.00 0.00 2.17
1778 2311 1.846007 ACTTCAGTTGTGTTTGGGCA 58.154 45.000 0.00 0.00 0.00 5.36
1826 2360 2.487934 CCTGGTGTCTGTTCTTCAGTG 58.512 52.381 0.00 0.00 43.97 3.66
1893 2442 3.266772 AGAGAGAATACAACCCCAATGCA 59.733 43.478 0.00 0.00 0.00 3.96
1915 2464 5.754890 GCATTTCCTTTGAATTGTGTGAGTT 59.245 36.000 0.00 0.00 35.35 3.01
1916 2465 6.258507 GCATTTCCTTTGAATTGTGTGAGTTT 59.741 34.615 0.00 0.00 35.35 2.66
1919 2468 9.883142 ATTTCCTTTGAATTGTGTGAGTTTTTA 57.117 25.926 0.00 0.00 0.00 1.52
1920 2469 8.925161 TTCCTTTGAATTGTGTGAGTTTTTAG 57.075 30.769 0.00 0.00 0.00 1.85
1921 2470 6.978080 TCCTTTGAATTGTGTGAGTTTTTAGC 59.022 34.615 0.00 0.00 0.00 3.09
2336 3451 8.803235 GTGAAAATAGAAGGTAAAACTGGGAAT 58.197 33.333 0.00 0.00 0.00 3.01
2394 3509 1.679680 CTGCAGCATTTACCATCCTGG 59.320 52.381 0.00 0.00 45.02 4.45
2476 3591 5.642686 CCCTATAGCGATACTACTTTGCTC 58.357 45.833 0.00 0.00 35.45 4.26
2478 3593 6.294564 CCCTATAGCGATACTACTTTGCTCAA 60.295 42.308 0.00 0.00 35.45 3.02
2482 3597 3.307242 GCGATACTACTTTGCTCAACTGG 59.693 47.826 0.00 0.00 0.00 4.00
2505 3620 7.776107 TGGTTTTCTTCAAACATGTCATACAA 58.224 30.769 0.00 0.00 46.01 2.41
2562 7276 9.118236 CGGAAGTCTTTTTCTCACAATAAATTC 57.882 33.333 0.00 0.00 0.00 2.17
2851 7752 7.156876 TGGCACAAATTAATTCACTAAGAGG 57.843 36.000 0.10 0.00 31.92 3.69
2852 7753 6.719370 TGGCACAAATTAATTCACTAAGAGGT 59.281 34.615 0.10 0.00 31.92 3.85
2853 7754 7.885922 TGGCACAAATTAATTCACTAAGAGGTA 59.114 33.333 0.10 0.00 31.92 3.08
2854 7755 8.182227 GGCACAAATTAATTCACTAAGAGGTAC 58.818 37.037 0.10 0.00 0.00 3.34
2866 7767 4.781264 AGGTACTCCCTCCGTTCC 57.219 61.111 0.00 0.00 40.71 3.62
2867 7768 1.778981 AGGTACTCCCTCCGTTCCA 59.221 57.895 0.00 0.00 40.71 3.53
2868 7769 0.115745 AGGTACTCCCTCCGTTCCAA 59.884 55.000 0.00 0.00 40.71 3.53
2869 7770 0.978907 GGTACTCCCTCCGTTCCAAA 59.021 55.000 0.00 0.00 0.00 3.28
2870 7771 1.348696 GGTACTCCCTCCGTTCCAAAA 59.651 52.381 0.00 0.00 0.00 2.44
2871 7772 2.026542 GGTACTCCCTCCGTTCCAAAAT 60.027 50.000 0.00 0.00 0.00 1.82
2872 7773 3.198417 GGTACTCCCTCCGTTCCAAAATA 59.802 47.826 0.00 0.00 0.00 1.40
2873 7774 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
2874 7775 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
2875 7776 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
2876 7777 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
2877 7778 3.521937 TCCCTCCGTTCCAAAATAGATGT 59.478 43.478 0.00 0.00 0.00 3.06
2878 7779 4.018779 TCCCTCCGTTCCAAAATAGATGTT 60.019 41.667 0.00 0.00 0.00 2.71
2879 7780 5.190132 TCCCTCCGTTCCAAAATAGATGTTA 59.810 40.000 0.00 0.00 0.00 2.41
2880 7781 5.527582 CCCTCCGTTCCAAAATAGATGTTAG 59.472 44.000 0.00 0.00 0.00 2.34
2881 7782 6.113411 CCTCCGTTCCAAAATAGATGTTAGT 58.887 40.000 0.00 0.00 0.00 2.24
2882 7783 7.270047 CCTCCGTTCCAAAATAGATGTTAGTA 58.730 38.462 0.00 0.00 0.00 1.82
2883 7784 7.224167 CCTCCGTTCCAAAATAGATGTTAGTAC 59.776 40.741 0.00 0.00 0.00 2.73
2884 7785 7.613585 TCCGTTCCAAAATAGATGTTAGTACA 58.386 34.615 0.00 0.00 38.95 2.90
2885 7786 8.095792 TCCGTTCCAAAATAGATGTTAGTACAA 58.904 33.333 0.00 0.00 37.91 2.41
2886 7787 8.723311 CCGTTCCAAAATAGATGTTAGTACAAA 58.277 33.333 0.00 0.00 37.91 2.83
2887 7788 9.755064 CGTTCCAAAATAGATGTTAGTACAAAG 57.245 33.333 0.00 0.00 37.91 2.77
2897 7798 8.764524 AGATGTTAGTACAAAGTTGAGTCATC 57.235 34.615 0.00 0.00 37.91 2.92
2898 7799 8.589338 AGATGTTAGTACAAAGTTGAGTCATCT 58.411 33.333 0.00 0.00 37.91 2.90
2899 7800 9.856488 GATGTTAGTACAAAGTTGAGTCATCTA 57.144 33.333 4.14 0.00 37.91 1.98
2912 7813 9.829507 AGTTGAGTCATCTATTTTAGAATGGAG 57.170 33.333 1.70 0.00 36.39 3.86
2913 7814 9.050601 GTTGAGTCATCTATTTTAGAATGGAGG 57.949 37.037 0.00 0.00 36.39 4.30
2914 7815 7.739825 TGAGTCATCTATTTTAGAATGGAGGG 58.260 38.462 4.57 0.00 36.39 4.30
2915 7816 7.568738 TGAGTCATCTATTTTAGAATGGAGGGA 59.431 37.037 4.57 0.04 36.39 4.20
2916 7817 7.972301 AGTCATCTATTTTAGAATGGAGGGAG 58.028 38.462 4.57 0.00 36.39 4.30
3123 8031 6.823286 TGATCTATTGGTCCTGTTTCCATA 57.177 37.500 0.00 0.00 33.50 2.74
3214 8125 3.420893 TGGCTAATTCTTTGTGTCCCAG 58.579 45.455 0.00 0.00 0.00 4.45
3216 8127 3.826729 GGCTAATTCTTTGTGTCCCAGTT 59.173 43.478 0.00 0.00 0.00 3.16
3260 8371 6.835029 AGCTTTACCCTGGGTGTAATAATA 57.165 37.500 28.64 2.17 36.19 0.98
3562 8673 7.172019 GGTATTAGAAACGAGAAAGTTGGTTCA 59.828 37.037 0.00 0.00 38.62 3.18
3689 8800 4.342092 CCACTTGAAATGAAGTTGGAACCT 59.658 41.667 0.00 0.00 33.75 3.50
3690 8801 5.534654 CCACTTGAAATGAAGTTGGAACCTA 59.465 40.000 0.00 0.00 33.75 3.08
3731 8842 6.540189 GCAACTCTAGCAGATTCCATAAGAAA 59.460 38.462 0.00 0.00 38.21 2.52
3738 8849 6.715280 AGCAGATTCCATAAGAAAAGAGTCA 58.285 36.000 0.00 0.00 38.21 3.41
3772 8883 9.596308 AGTCTTAAAGGGGCTTTTATTTTCTTA 57.404 29.630 0.00 0.00 35.21 2.10
3790 8901 2.909504 TAGAGTCTCCAGAGCAACCT 57.090 50.000 0.00 0.00 0.00 3.50
3826 8937 4.009675 TCCACAAACTGCAGCCTTTATAG 58.990 43.478 15.27 0.00 0.00 1.31
3843 8954 8.807581 GCCTTTATAGTTTTTCATCCAAATTCG 58.192 33.333 0.00 0.00 0.00 3.34
3851 8967 5.499139 TTTCATCCAAATTCGTCCTATGC 57.501 39.130 0.00 0.00 0.00 3.14
3853 8969 1.948104 TCCAAATTCGTCCTATGCGG 58.052 50.000 0.00 0.00 0.00 5.69
3896 9014 8.815565 TCAGTTTGGCATAGATATTAACCAAA 57.184 30.769 0.00 0.00 43.04 3.28
3897 9015 8.902806 TCAGTTTGGCATAGATATTAACCAAAG 58.097 33.333 5.31 0.00 45.13 2.77
3898 9016 8.902806 CAGTTTGGCATAGATATTAACCAAAGA 58.097 33.333 5.31 0.00 45.13 2.52
3899 9017 9.474313 AGTTTGGCATAGATATTAACCAAAGAA 57.526 29.630 5.31 0.00 45.13 2.52
3929 9047 6.395426 AATCATTGTTCAACATCACACACT 57.605 33.333 0.00 0.00 0.00 3.55
3936 9054 5.048434 TGTTCAACATCACACACTTCAACAA 60.048 36.000 0.00 0.00 0.00 2.83
3937 9055 4.980590 TCAACATCACACACTTCAACAAC 58.019 39.130 0.00 0.00 0.00 3.32
3939 9057 5.125257 TCAACATCACACACTTCAACAACAT 59.875 36.000 0.00 0.00 0.00 2.71
3940 9058 5.581126 ACATCACACACTTCAACAACATT 57.419 34.783 0.00 0.00 0.00 2.71
3962 9135 9.499479 ACATTACAACATTGCAAATTTGGAATA 57.501 25.926 30.00 17.99 45.61 1.75
4034 9232 8.335532 AGCATACTTACTAATGTCAAAAAGCA 57.664 30.769 0.00 0.00 0.00 3.91
4035 9233 8.792633 AGCATACTTACTAATGTCAAAAAGCAA 58.207 29.630 0.00 0.00 0.00 3.91
4036 9234 8.850452 GCATACTTACTAATGTCAAAAAGCAAC 58.150 33.333 0.00 0.00 0.00 4.17
4037 9235 9.891828 CATACTTACTAATGTCAAAAAGCAACA 57.108 29.630 0.00 0.00 0.00 3.33
4041 9239 9.559958 CTTACTAATGTCAAAAAGCAACATAGG 57.440 33.333 0.00 0.00 33.42 2.57
4042 9240 6.924111 ACTAATGTCAAAAAGCAACATAGGG 58.076 36.000 0.00 0.00 33.42 3.53
4043 9241 3.658757 TGTCAAAAAGCAACATAGGGC 57.341 42.857 0.00 0.00 0.00 5.19
4044 9242 2.030363 TGTCAAAAAGCAACATAGGGCG 60.030 45.455 0.00 0.00 34.54 6.13
4045 9243 1.543802 TCAAAAAGCAACATAGGGCGG 59.456 47.619 0.00 0.00 34.54 6.13
4046 9244 0.246360 AAAAAGCAACATAGGGCGGC 59.754 50.000 0.00 0.00 34.54 6.53
4047 9245 1.604147 AAAAGCAACATAGGGCGGCC 61.604 55.000 22.67 22.67 34.54 6.13
4048 9246 2.779742 AAAGCAACATAGGGCGGCCA 62.780 55.000 31.59 16.58 34.54 5.36
4049 9247 2.753849 GCAACATAGGGCGGCCAA 60.754 61.111 31.59 8.70 0.00 4.52
4050 9248 2.127232 GCAACATAGGGCGGCCAAT 61.127 57.895 31.59 13.41 0.00 3.16
4051 9249 1.675720 GCAACATAGGGCGGCCAATT 61.676 55.000 31.59 15.05 0.00 2.32
4052 9250 0.823460 CAACATAGGGCGGCCAATTT 59.177 50.000 31.59 14.22 0.00 1.82
4053 9251 1.206849 CAACATAGGGCGGCCAATTTT 59.793 47.619 31.59 14.60 0.00 1.82
4054 9252 0.823460 ACATAGGGCGGCCAATTTTG 59.177 50.000 31.59 20.06 0.00 2.44
4067 9265 4.149511 CCAATTTTGGTGTTTTGACCCT 57.850 40.909 0.95 0.00 43.43 4.34
4068 9266 4.522114 CCAATTTTGGTGTTTTGACCCTT 58.478 39.130 0.95 0.00 43.43 3.95
4069 9267 4.946772 CCAATTTTGGTGTTTTGACCCTTT 59.053 37.500 0.95 0.00 43.43 3.11
4070 9268 5.417266 CCAATTTTGGTGTTTTGACCCTTTT 59.583 36.000 0.95 0.00 43.43 2.27
4071 9269 6.320944 CAATTTTGGTGTTTTGACCCTTTTG 58.679 36.000 0.00 0.00 34.79 2.44
4072 9270 4.625607 TTTGGTGTTTTGACCCTTTTGT 57.374 36.364 0.00 0.00 34.79 2.83
4073 9271 3.601443 TGGTGTTTTGACCCTTTTGTG 57.399 42.857 0.00 0.00 34.79 3.33
4074 9272 3.165875 TGGTGTTTTGACCCTTTTGTGA 58.834 40.909 0.00 0.00 34.79 3.58
4075 9273 3.578716 TGGTGTTTTGACCCTTTTGTGAA 59.421 39.130 0.00 0.00 34.79 3.18
4076 9274 4.040461 TGGTGTTTTGACCCTTTTGTGAAA 59.960 37.500 0.00 0.00 34.79 2.69
4077 9275 4.629634 GGTGTTTTGACCCTTTTGTGAAAG 59.370 41.667 0.00 0.00 41.56 2.62
4078 9276 5.234752 GTGTTTTGACCCTTTTGTGAAAGT 58.765 37.500 0.00 0.00 40.53 2.66
4079 9277 5.699001 GTGTTTTGACCCTTTTGTGAAAGTT 59.301 36.000 0.00 0.00 40.53 2.66
4080 9278 6.869388 GTGTTTTGACCCTTTTGTGAAAGTTA 59.131 34.615 0.00 0.00 40.53 2.24
4081 9279 6.869388 TGTTTTGACCCTTTTGTGAAAGTTAC 59.131 34.615 0.00 0.00 40.53 2.50
4082 9280 4.886247 TGACCCTTTTGTGAAAGTTACG 57.114 40.909 0.00 0.00 40.53 3.18
4083 9281 3.065648 TGACCCTTTTGTGAAAGTTACGC 59.934 43.478 0.00 0.00 40.53 4.42
4084 9282 2.359848 ACCCTTTTGTGAAAGTTACGCC 59.640 45.455 0.00 0.00 40.53 5.68
4085 9283 2.359531 CCCTTTTGTGAAAGTTACGCCA 59.640 45.455 0.00 0.00 40.53 5.69
4086 9284 3.181485 CCCTTTTGTGAAAGTTACGCCAA 60.181 43.478 0.00 0.00 40.53 4.52
4087 9285 4.425520 CCTTTTGTGAAAGTTACGCCAAA 58.574 39.130 0.00 0.00 40.53 3.28
4088 9286 5.047188 CCTTTTGTGAAAGTTACGCCAAAT 58.953 37.500 0.00 0.00 40.53 2.32
4089 9287 5.174943 CCTTTTGTGAAAGTTACGCCAAATC 59.825 40.000 0.00 0.00 40.53 2.17
4090 9288 5.508200 TTTGTGAAAGTTACGCCAAATCT 57.492 34.783 0.00 0.00 0.00 2.40
4091 9289 4.481930 TGTGAAAGTTACGCCAAATCTG 57.518 40.909 0.00 0.00 0.00 2.90
4092 9290 4.130857 TGTGAAAGTTACGCCAAATCTGA 58.869 39.130 0.00 0.00 0.00 3.27
4093 9291 4.024387 TGTGAAAGTTACGCCAAATCTGAC 60.024 41.667 0.00 0.00 0.00 3.51
4094 9292 3.500680 TGAAAGTTACGCCAAATCTGACC 59.499 43.478 0.00 0.00 0.00 4.02
4095 9293 2.109425 AGTTACGCCAAATCTGACCC 57.891 50.000 0.00 0.00 0.00 4.46
4096 9294 1.628846 AGTTACGCCAAATCTGACCCT 59.371 47.619 0.00 0.00 0.00 4.34
4097 9295 1.737793 GTTACGCCAAATCTGACCCTG 59.262 52.381 0.00 0.00 0.00 4.45
4098 9296 0.251916 TACGCCAAATCTGACCCTGG 59.748 55.000 0.00 0.00 0.00 4.45
4099 9297 1.002134 CGCCAAATCTGACCCTGGT 60.002 57.895 0.00 0.00 0.00 4.00
4100 9298 0.609131 CGCCAAATCTGACCCTGGTT 60.609 55.000 0.00 0.00 0.00 3.67
4101 9299 1.339631 CGCCAAATCTGACCCTGGTTA 60.340 52.381 0.00 0.00 0.00 2.85
4102 9300 2.802719 GCCAAATCTGACCCTGGTTAA 58.197 47.619 0.00 0.00 0.00 2.01
4103 9301 3.161866 GCCAAATCTGACCCTGGTTAAA 58.838 45.455 0.00 0.00 0.00 1.52
4104 9302 3.576550 GCCAAATCTGACCCTGGTTAAAA 59.423 43.478 0.00 0.00 0.00 1.52
4105 9303 4.039852 GCCAAATCTGACCCTGGTTAAAAA 59.960 41.667 0.00 0.00 0.00 1.94
4128 9326 5.582689 AAAATCGGGATCTGACCATTTTC 57.417 39.130 0.00 0.00 30.28 2.29
4129 9327 2.710096 TCGGGATCTGACCATTTTCC 57.290 50.000 0.00 0.00 0.00 3.13
4130 9328 2.196595 TCGGGATCTGACCATTTTCCT 58.803 47.619 0.00 0.00 0.00 3.36
4131 9329 3.380393 TCGGGATCTGACCATTTTCCTA 58.620 45.455 0.00 0.00 0.00 2.94
4132 9330 3.134081 TCGGGATCTGACCATTTTCCTAC 59.866 47.826 0.00 0.00 0.00 3.18
4133 9331 3.118408 CGGGATCTGACCATTTTCCTACA 60.118 47.826 0.00 0.00 0.00 2.74
4134 9332 4.455606 GGGATCTGACCATTTTCCTACAG 58.544 47.826 0.00 0.00 0.00 2.74
4135 9333 3.879892 GGATCTGACCATTTTCCTACAGC 59.120 47.826 0.00 0.00 0.00 4.40
4136 9334 3.350219 TCTGACCATTTTCCTACAGCC 57.650 47.619 0.00 0.00 0.00 4.85
4137 9335 2.009774 CTGACCATTTTCCTACAGCCG 58.990 52.381 0.00 0.00 0.00 5.52
4138 9336 1.339631 TGACCATTTTCCTACAGCCGG 60.340 52.381 0.00 0.00 0.00 6.13
4139 9337 0.034477 ACCATTTTCCTACAGCCGGG 60.034 55.000 2.18 0.00 0.00 5.73
4140 9338 0.751643 CCATTTTCCTACAGCCGGGG 60.752 60.000 2.18 0.00 0.00 5.73
4141 9339 0.034477 CATTTTCCTACAGCCGGGGT 60.034 55.000 2.18 0.00 0.00 4.95
4142 9340 0.255033 ATTTTCCTACAGCCGGGGTC 59.745 55.000 2.18 0.00 0.00 4.46
4143 9341 2.175035 TTTTCCTACAGCCGGGGTCG 62.175 60.000 2.18 0.00 0.00 4.79
4144 9342 3.588817 TTCCTACAGCCGGGGTCGA 62.589 63.158 2.18 0.00 39.00 4.20
4145 9343 2.838225 CCTACAGCCGGGGTCGAT 60.838 66.667 2.18 0.00 39.00 3.59
4146 9344 2.417516 CTACAGCCGGGGTCGATG 59.582 66.667 2.18 0.00 39.00 3.84
4147 9345 3.151710 TACAGCCGGGGTCGATGG 61.152 66.667 2.18 0.00 39.00 3.51
4153 9351 4.280494 CGGGGTCGATGGCGGTAG 62.280 72.222 0.00 0.00 39.00 3.18
4154 9352 3.925090 GGGGTCGATGGCGGTAGG 61.925 72.222 0.00 0.00 38.28 3.18
4155 9353 3.925090 GGGTCGATGGCGGTAGGG 61.925 72.222 0.00 0.00 38.28 3.53
4156 9354 3.152400 GGTCGATGGCGGTAGGGT 61.152 66.667 0.00 0.00 38.28 4.34
4157 9355 1.829533 GGTCGATGGCGGTAGGGTA 60.830 63.158 0.00 0.00 38.28 3.69
4158 9356 1.183676 GGTCGATGGCGGTAGGGTAT 61.184 60.000 0.00 0.00 38.28 2.73
4159 9357 1.538047 GTCGATGGCGGTAGGGTATA 58.462 55.000 0.00 0.00 38.28 1.47
4160 9358 1.200948 GTCGATGGCGGTAGGGTATAC 59.799 57.143 0.00 0.00 38.28 1.47
4161 9359 0.529378 CGATGGCGGTAGGGTATACC 59.471 60.000 13.99 13.99 40.67 2.73
4162 9360 1.636148 GATGGCGGTAGGGTATACCA 58.364 55.000 23.33 0.57 43.89 3.25
4163 9361 1.549170 GATGGCGGTAGGGTATACCAG 59.451 57.143 23.33 9.66 43.89 4.00
4164 9362 1.117142 TGGCGGTAGGGTATACCAGC 61.117 60.000 23.33 17.59 43.89 4.85
4165 9363 1.670015 GCGGTAGGGTATACCAGCC 59.330 63.158 23.33 18.48 45.89 4.85
4171 9369 1.670015 GGGTATACCAGCCTACCGC 59.330 63.158 23.33 0.00 41.95 5.68
4172 9370 1.670015 GGTATACCAGCCTACCGCC 59.330 63.158 17.44 0.00 38.78 6.13
4173 9371 1.117142 GGTATACCAGCCTACCGCCA 61.117 60.000 17.44 0.00 38.78 5.69
4174 9372 0.754472 GTATACCAGCCTACCGCCAA 59.246 55.000 0.00 0.00 38.78 4.52
4175 9373 1.045407 TATACCAGCCTACCGCCAAG 58.955 55.000 0.00 0.00 38.78 3.61
4185 9383 4.722700 CCGCCAAGGTCCCTGGTG 62.723 72.222 12.58 12.58 34.51 4.17
4186 9384 4.722700 CGCCAAGGTCCCTGGTGG 62.723 72.222 11.79 6.35 0.00 4.61
4188 9386 3.579302 CCAAGGTCCCTGGTGGCA 61.579 66.667 0.00 0.00 0.00 4.92
4189 9387 2.034687 CAAGGTCCCTGGTGGCAG 59.965 66.667 0.00 0.00 0.00 4.85
4190 9388 3.260100 AAGGTCCCTGGTGGCAGG 61.260 66.667 0.00 0.00 41.92 4.85
4193 9391 4.284550 GTCCCTGGTGGCAGGCAA 62.285 66.667 0.00 0.00 40.95 4.52
4194 9392 4.284550 TCCCTGGTGGCAGGCAAC 62.285 66.667 4.68 4.68 40.95 4.17
4208 9406 0.727398 GGCAACTTATCCACGTCAGC 59.273 55.000 0.00 0.00 0.00 4.26
4209 9407 0.370273 GCAACTTATCCACGTCAGCG 59.630 55.000 0.00 0.00 44.93 5.18
4210 9408 0.370273 CAACTTATCCACGTCAGCGC 59.630 55.000 0.00 0.00 42.83 5.92
4211 9409 0.037697 AACTTATCCACGTCAGCGCA 60.038 50.000 11.47 0.00 42.83 6.09
4212 9410 0.458543 ACTTATCCACGTCAGCGCAG 60.459 55.000 11.47 0.00 42.83 5.18
4213 9411 0.458543 CTTATCCACGTCAGCGCAGT 60.459 55.000 11.47 0.27 42.83 4.40
4214 9412 0.735978 TTATCCACGTCAGCGCAGTG 60.736 55.000 11.47 13.89 42.83 3.66
4224 9422 3.431725 GCGCAGTGCAACCCTACC 61.432 66.667 16.83 0.00 45.45 3.18
4225 9423 2.347490 CGCAGTGCAACCCTACCT 59.653 61.111 16.83 0.00 37.80 3.08
4226 9424 1.741770 CGCAGTGCAACCCTACCTC 60.742 63.158 16.83 0.00 37.80 3.85
4227 9425 1.377333 GCAGTGCAACCCTACCTCC 60.377 63.158 11.09 0.00 37.80 4.30
4228 9426 2.066340 CAGTGCAACCCTACCTCCA 58.934 57.895 0.00 0.00 37.80 3.86
4229 9427 0.321653 CAGTGCAACCCTACCTCCAC 60.322 60.000 0.00 0.00 37.80 4.02
4230 9428 0.766674 AGTGCAACCCTACCTCCACA 60.767 55.000 0.00 0.00 37.80 4.17
4231 9429 0.605589 GTGCAACCCTACCTCCACAC 60.606 60.000 0.00 0.00 0.00 3.82
4232 9430 1.057275 TGCAACCCTACCTCCACACA 61.057 55.000 0.00 0.00 0.00 3.72
4233 9431 0.321653 GCAACCCTACCTCCACACAG 60.322 60.000 0.00 0.00 0.00 3.66
4234 9432 0.324943 CAACCCTACCTCCACACAGG 59.675 60.000 0.00 0.00 39.80 4.00
4235 9433 1.489560 AACCCTACCTCCACACAGGC 61.490 60.000 0.00 0.00 36.98 4.85
4236 9434 1.613630 CCCTACCTCCACACAGGCT 60.614 63.158 0.00 0.00 36.98 4.58
4237 9435 0.325296 CCCTACCTCCACACAGGCTA 60.325 60.000 0.00 0.00 36.98 3.93
4238 9436 1.115467 CCTACCTCCACACAGGCTAG 58.885 60.000 0.00 0.00 36.98 3.42
4239 9437 0.461961 CTACCTCCACACAGGCTAGC 59.538 60.000 6.04 6.04 36.98 3.42
4240 9438 1.320344 TACCTCCACACAGGCTAGCG 61.320 60.000 9.00 0.00 36.98 4.26
4241 9439 2.185350 CTCCACACAGGCTAGCGG 59.815 66.667 9.00 6.03 37.29 5.52
4242 9440 2.603473 TCCACACAGGCTAGCGGT 60.603 61.111 9.00 6.74 37.29 5.68
4243 9441 1.304630 TCCACACAGGCTAGCGGTA 60.305 57.895 9.00 0.00 37.29 4.02
4244 9442 1.141881 CCACACAGGCTAGCGGTAG 59.858 63.158 17.24 17.24 0.00 3.18
4251 9449 4.580835 GCTAGCGGTAGCCTATGC 57.419 61.111 31.39 10.24 45.37 3.14
4252 9450 1.666011 GCTAGCGGTAGCCTATGCA 59.334 57.895 31.39 0.00 45.37 3.96
4253 9451 0.033504 GCTAGCGGTAGCCTATGCAA 59.966 55.000 31.39 0.00 45.37 4.08
4254 9452 1.784525 CTAGCGGTAGCCTATGCAAC 58.215 55.000 8.98 0.00 46.67 4.17
4255 9453 0.391597 TAGCGGTAGCCTATGCAACC 59.608 55.000 0.00 0.00 46.67 3.77
4256 9454 1.892391 GCGGTAGCCTATGCAACCC 60.892 63.158 0.00 0.00 41.13 4.11
4257 9455 1.830145 CGGTAGCCTATGCAACCCT 59.170 57.895 0.00 0.00 41.13 4.34
4258 9456 1.045407 CGGTAGCCTATGCAACCCTA 58.955 55.000 0.00 0.00 41.13 3.53
4259 9457 1.270147 CGGTAGCCTATGCAACCCTAC 60.270 57.143 0.00 0.00 41.13 3.18
4260 9458 1.071857 GGTAGCCTATGCAACCCTACC 59.928 57.143 15.75 15.75 40.66 3.18
4261 9459 1.045407 TAGCCTATGCAACCCTACCG 58.955 55.000 0.00 0.00 41.13 4.02
4262 9460 1.892391 GCCTATGCAACCCTACCGC 60.892 63.158 0.00 0.00 37.47 5.68
4263 9461 1.227853 CCTATGCAACCCTACCGCC 60.228 63.158 0.00 0.00 0.00 6.13
4264 9462 1.594293 CTATGCAACCCTACCGCCG 60.594 63.158 0.00 0.00 0.00 6.46
4265 9463 2.023414 CTATGCAACCCTACCGCCGA 62.023 60.000 0.00 0.00 0.00 5.54
4266 9464 2.023414 TATGCAACCCTACCGCCGAG 62.023 60.000 0.00 0.00 0.00 4.63
4290 9488 3.773404 GGCGGTAGGCGGGTACAA 61.773 66.667 0.00 0.00 44.92 2.41
4291 9489 2.510012 GCGGTAGGCGGGTACAAC 60.510 66.667 0.00 0.00 0.00 3.32
4292 9490 2.202650 CGGTAGGCGGGTACAACG 60.203 66.667 5.00 5.00 0.00 4.10
4293 9491 2.973082 GGTAGGCGGGTACAACGT 59.027 61.111 10.29 0.00 0.00 3.99
4294 9492 1.293179 GGTAGGCGGGTACAACGTT 59.707 57.895 10.29 0.00 0.00 3.99
4295 9493 1.015607 GGTAGGCGGGTACAACGTTG 61.016 60.000 26.20 26.20 0.00 4.10
4296 9494 0.319813 GTAGGCGGGTACAACGTTGT 60.320 55.000 33.99 33.99 44.86 3.32
4297 9495 1.067915 GTAGGCGGGTACAACGTTGTA 60.068 52.381 31.86 31.86 42.35 2.41
4298 9496 0.609662 AGGCGGGTACAACGTTGTAT 59.390 50.000 36.03 20.90 44.59 2.29
4299 9497 1.002315 AGGCGGGTACAACGTTGTATT 59.998 47.619 36.03 18.00 44.59 1.89
4300 9498 1.805943 GGCGGGTACAACGTTGTATTT 59.194 47.619 36.03 17.66 44.59 1.40
4301 9499 2.413108 GGCGGGTACAACGTTGTATTTG 60.413 50.000 36.03 28.17 44.59 2.32
4302 9500 2.479656 GCGGGTACAACGTTGTATTTGA 59.520 45.455 36.03 18.85 44.59 2.69
4303 9501 3.125658 GCGGGTACAACGTTGTATTTGAT 59.874 43.478 36.03 15.96 44.59 2.57
4304 9502 4.329528 GCGGGTACAACGTTGTATTTGATA 59.670 41.667 36.03 17.47 44.59 2.15
4305 9503 5.724769 GCGGGTACAACGTTGTATTTGATAC 60.725 44.000 36.03 25.88 44.59 2.24
4306 9504 5.577945 CGGGTACAACGTTGTATTTGATACT 59.422 40.000 36.03 13.93 44.59 2.12
4307 9505 6.091169 CGGGTACAACGTTGTATTTGATACTT 59.909 38.462 36.03 13.45 44.59 2.24
4308 9506 7.275341 CGGGTACAACGTTGTATTTGATACTTA 59.725 37.037 36.03 14.91 44.59 2.24
4309 9507 8.598075 GGGTACAACGTTGTATTTGATACTTAG 58.402 37.037 36.03 6.96 44.59 2.18
4310 9508 9.357652 GGTACAACGTTGTATTTGATACTTAGA 57.642 33.333 36.03 14.31 44.59 2.10
4313 9511 9.485206 ACAACGTTGTATTTGATACTTAGAACT 57.515 29.630 31.49 0.30 40.16 3.01
4326 9524 9.706691 TGATACTTAGAACTTTTTGACAGTAGG 57.293 33.333 0.00 0.00 0.00 3.18
4327 9525 9.152595 GATACTTAGAACTTTTTGACAGTAGGG 57.847 37.037 0.00 0.00 0.00 3.53
4328 9526 5.763698 ACTTAGAACTTTTTGACAGTAGGGC 59.236 40.000 0.00 0.00 0.00 5.19
4329 9527 4.164843 AGAACTTTTTGACAGTAGGGCA 57.835 40.909 0.00 0.00 0.00 5.36
4330 9528 4.729868 AGAACTTTTTGACAGTAGGGCAT 58.270 39.130 0.00 0.00 0.00 4.40
4331 9529 4.520492 AGAACTTTTTGACAGTAGGGCATG 59.480 41.667 0.00 0.00 0.00 4.06
4332 9530 2.558359 ACTTTTTGACAGTAGGGCATGC 59.442 45.455 9.90 9.90 0.00 4.06
4333 9531 1.164411 TTTTGACAGTAGGGCATGCG 58.836 50.000 12.44 0.00 0.00 4.73
4334 9532 0.323302 TTTGACAGTAGGGCATGCGA 59.677 50.000 12.44 0.00 0.00 5.10
4335 9533 0.391130 TTGACAGTAGGGCATGCGAC 60.391 55.000 12.44 9.67 0.00 5.19
4336 9534 1.521681 GACAGTAGGGCATGCGACC 60.522 63.158 12.44 8.35 43.02 4.79
4337 9535 2.203070 CAGTAGGGCATGCGACCC 60.203 66.667 12.44 7.54 44.30 4.46
4342 9540 2.203070 GGGCATGCGACCCTACTG 60.203 66.667 12.44 0.00 44.68 2.74
4343 9541 2.897350 GGCATGCGACCCTACTGC 60.897 66.667 12.44 0.00 0.00 4.40
4344 9542 2.897350 GCATGCGACCCTACTGCC 60.897 66.667 0.00 0.00 0.00 4.85
4345 9543 2.584064 CATGCGACCCTACTGCCA 59.416 61.111 0.00 0.00 0.00 4.92
4346 9544 1.078497 CATGCGACCCTACTGCCAA 60.078 57.895 0.00 0.00 0.00 4.52
4347 9545 1.091771 CATGCGACCCTACTGCCAAG 61.092 60.000 0.00 0.00 0.00 3.61
4348 9546 2.125106 GCGACCCTACTGCCAAGG 60.125 66.667 0.00 0.00 0.00 3.61
4361 9559 4.530857 CAAGGGCCTCGGCGGTAG 62.531 72.222 6.46 0.00 43.06 3.18
4367 9565 3.771160 CCTCGGCGGTAGGCAGTT 61.771 66.667 7.21 0.00 46.16 3.16
4368 9566 2.420568 CCTCGGCGGTAGGCAGTTA 61.421 63.158 7.21 0.00 46.16 2.24
4369 9567 1.740285 CTCGGCGGTAGGCAGTTAT 59.260 57.895 7.21 0.00 46.16 1.89
4370 9568 0.956633 CTCGGCGGTAGGCAGTTATA 59.043 55.000 7.21 0.00 46.16 0.98
4371 9569 0.670162 TCGGCGGTAGGCAGTTATAC 59.330 55.000 7.21 0.00 46.16 1.47
4372 9570 0.319297 CGGCGGTAGGCAGTTATACC 60.319 60.000 0.00 0.00 46.16 2.73
4373 9571 0.034476 GGCGGTAGGCAGTTATACCC 59.966 60.000 0.00 0.00 46.16 3.69
4374 9572 1.046204 GCGGTAGGCAGTTATACCCT 58.954 55.000 0.00 0.00 42.87 4.34
4375 9573 2.242043 GCGGTAGGCAGTTATACCCTA 58.758 52.381 0.00 0.00 42.87 3.53
4376 9574 2.029560 GCGGTAGGCAGTTATACCCTAC 60.030 54.545 7.39 7.39 46.60 3.18
4377 9575 3.494332 CGGTAGGCAGTTATACCCTACT 58.506 50.000 13.81 0.00 46.54 2.57
4378 9576 3.255149 CGGTAGGCAGTTATACCCTACTG 59.745 52.174 13.81 11.79 46.54 2.74
4382 9580 2.814280 CAGTTATACCCTACTGCCGG 57.186 55.000 0.00 0.00 35.79 6.13
4383 9581 1.046204 AGTTATACCCTACTGCCGGC 58.954 55.000 22.73 22.73 0.00 6.13
4384 9582 0.754472 GTTATACCCTACTGCCGGCA 59.246 55.000 30.59 30.59 0.00 5.69
4385 9583 1.139455 GTTATACCCTACTGCCGGCAA 59.861 52.381 32.09 16.39 0.00 4.52
4386 9584 0.754472 TATACCCTACTGCCGGCAAC 59.246 55.000 32.09 0.00 0.00 4.17
4387 9585 1.979619 ATACCCTACTGCCGGCAACC 61.980 60.000 32.09 0.00 0.00 3.77
4388 9586 4.796495 CCCTACTGCCGGCAACCC 62.796 72.222 32.09 0.00 0.00 4.11
4389 9587 3.717294 CCTACTGCCGGCAACCCT 61.717 66.667 32.09 15.23 0.00 4.34
4390 9588 2.436646 CTACTGCCGGCAACCCTG 60.437 66.667 32.09 20.81 0.00 4.45
4391 9589 3.246112 TACTGCCGGCAACCCTGT 61.246 61.111 32.09 25.49 0.00 4.00
4392 9590 2.748058 CTACTGCCGGCAACCCTGTT 62.748 60.000 32.09 10.82 0.00 3.16
4393 9591 3.673484 CTGCCGGCAACCCTGTTG 61.673 66.667 32.09 12.49 0.00 3.33
4405 9603 2.215942 CCCTGTTGGTAGGAAAAGGG 57.784 55.000 0.00 0.00 40.42 3.95
4406 9604 1.427753 CCCTGTTGGTAGGAAAAGGGT 59.572 52.381 0.00 0.00 40.42 4.34
4407 9605 2.554564 CCCTGTTGGTAGGAAAAGGGTC 60.555 54.545 0.00 0.00 40.42 4.46
4408 9606 2.107552 CCTGTTGGTAGGAAAAGGGTCA 59.892 50.000 0.00 0.00 40.42 4.02
4409 9607 3.412386 CTGTTGGTAGGAAAAGGGTCAG 58.588 50.000 0.00 0.00 0.00 3.51
4410 9608 3.050089 TGTTGGTAGGAAAAGGGTCAGA 58.950 45.455 0.00 0.00 0.00 3.27
4411 9609 3.655777 TGTTGGTAGGAAAAGGGTCAGAT 59.344 43.478 0.00 0.00 0.00 2.90
4412 9610 4.262617 GTTGGTAGGAAAAGGGTCAGATC 58.737 47.826 0.00 0.00 0.00 2.75
4413 9611 3.803340 TGGTAGGAAAAGGGTCAGATCT 58.197 45.455 0.00 0.00 0.00 2.75
4414 9612 4.175962 TGGTAGGAAAAGGGTCAGATCTT 58.824 43.478 0.00 0.00 0.00 2.40
4415 9613 4.019321 TGGTAGGAAAAGGGTCAGATCTTG 60.019 45.833 0.00 0.00 0.00 3.02
4416 9614 4.225267 GGTAGGAAAAGGGTCAGATCTTGA 59.775 45.833 0.00 0.00 0.00 3.02
4417 9615 5.280521 GGTAGGAAAAGGGTCAGATCTTGAA 60.281 44.000 0.00 0.00 37.61 2.69
4418 9616 5.324832 AGGAAAAGGGTCAGATCTTGAAA 57.675 39.130 0.00 0.00 37.61 2.69
4419 9617 5.705400 AGGAAAAGGGTCAGATCTTGAAAA 58.295 37.500 0.00 0.00 37.61 2.29
4420 9618 6.136155 AGGAAAAGGGTCAGATCTTGAAAAA 58.864 36.000 0.00 0.00 37.61 1.94
4443 9641 3.421919 AAAATGAACCAGGGCCAAATG 57.578 42.857 6.18 0.00 0.00 2.32
4444 9642 2.028561 AATGAACCAGGGCCAAATGT 57.971 45.000 6.18 0.00 0.00 2.71
4445 9643 2.028561 ATGAACCAGGGCCAAATGTT 57.971 45.000 6.18 2.70 0.00 2.71
4446 9644 1.047002 TGAACCAGGGCCAAATGTTG 58.953 50.000 6.18 0.00 0.00 3.33
4447 9645 0.320683 GAACCAGGGCCAAATGTTGC 60.321 55.000 6.18 0.00 0.00 4.17
4448 9646 0.763986 AACCAGGGCCAAATGTTGCT 60.764 50.000 6.18 0.00 0.00 3.91
4449 9647 0.763986 ACCAGGGCCAAATGTTGCTT 60.764 50.000 6.18 0.00 0.00 3.91
4450 9648 1.265236 CCAGGGCCAAATGTTGCTTA 58.735 50.000 6.18 0.00 0.00 3.09
4451 9649 1.622811 CCAGGGCCAAATGTTGCTTAA 59.377 47.619 6.18 0.00 0.00 1.85
4452 9650 2.612721 CCAGGGCCAAATGTTGCTTAAC 60.613 50.000 6.18 0.00 0.00 2.01
4453 9651 2.299867 CAGGGCCAAATGTTGCTTAACT 59.700 45.455 6.18 0.00 0.00 2.24
4454 9652 2.972021 AGGGCCAAATGTTGCTTAACTT 59.028 40.909 6.18 0.00 0.00 2.66
4455 9653 3.390967 AGGGCCAAATGTTGCTTAACTTT 59.609 39.130 6.18 0.00 0.00 2.66
4456 9654 3.745975 GGGCCAAATGTTGCTTAACTTTC 59.254 43.478 4.39 0.00 0.00 2.62
4457 9655 3.428534 GGCCAAATGTTGCTTAACTTTCG 59.571 43.478 0.00 0.00 0.00 3.46
4458 9656 3.121025 GCCAAATGTTGCTTAACTTTCGC 60.121 43.478 0.00 0.00 0.00 4.70
4459 9657 4.047822 CCAAATGTTGCTTAACTTTCGCA 58.952 39.130 0.00 0.00 0.00 5.10
4460 9658 4.505922 CCAAATGTTGCTTAACTTTCGCAA 59.494 37.500 0.00 0.00 40.93 4.85
4461 9659 5.006165 CCAAATGTTGCTTAACTTTCGCAAA 59.994 36.000 1.11 0.00 44.22 3.68
4462 9660 6.456181 CCAAATGTTGCTTAACTTTCGCAAAA 60.456 34.615 1.11 0.00 44.22 2.44
4463 9661 5.888412 ATGTTGCTTAACTTTCGCAAAAG 57.112 34.783 0.00 0.00 44.22 2.27
4464 9662 4.109050 TGTTGCTTAACTTTCGCAAAAGG 58.891 39.130 1.57 0.00 45.15 3.11
4465 9663 3.363341 TGCTTAACTTTCGCAAAAGGG 57.637 42.857 1.57 0.00 45.15 3.95
4466 9664 2.691011 TGCTTAACTTTCGCAAAAGGGT 59.309 40.909 1.57 0.00 45.15 4.34
4467 9665 3.243267 TGCTTAACTTTCGCAAAAGGGTC 60.243 43.478 1.57 0.00 45.15 4.46
4468 9666 3.243267 GCTTAACTTTCGCAAAAGGGTCA 60.243 43.478 1.57 0.00 45.15 4.02
4469 9667 4.735283 GCTTAACTTTCGCAAAAGGGTCAA 60.735 41.667 1.57 0.00 45.15 3.18
4470 9668 3.878160 AACTTTCGCAAAAGGGTCAAA 57.122 38.095 1.57 0.00 45.15 2.69
4471 9669 3.878160 ACTTTCGCAAAAGGGTCAAAA 57.122 38.095 1.57 0.00 45.15 2.44
4472 9670 3.517602 ACTTTCGCAAAAGGGTCAAAAC 58.482 40.909 1.57 0.00 45.15 2.43
4473 9671 3.056465 ACTTTCGCAAAAGGGTCAAAACA 60.056 39.130 1.57 0.00 45.15 2.83
4474 9672 2.570442 TCGCAAAAGGGTCAAAACAC 57.430 45.000 0.00 0.00 0.00 3.32
4475 9673 1.135333 TCGCAAAAGGGTCAAAACACC 59.865 47.619 0.00 0.00 35.42 4.16
4476 9674 1.134965 CGCAAAAGGGTCAAAACACCA 60.135 47.619 0.00 0.00 38.32 4.17
4477 9675 2.675317 CGCAAAAGGGTCAAAACACCAA 60.675 45.455 0.00 0.00 38.32 3.67
4478 9676 3.339141 GCAAAAGGGTCAAAACACCAAA 58.661 40.909 0.00 0.00 38.32 3.28
4479 9677 3.944650 GCAAAAGGGTCAAAACACCAAAT 59.055 39.130 0.00 0.00 38.32 2.32
4480 9678 4.397730 GCAAAAGGGTCAAAACACCAAATT 59.602 37.500 0.00 0.00 38.32 1.82
4481 9679 5.105957 GCAAAAGGGTCAAAACACCAAATTT 60.106 36.000 0.00 0.00 38.32 1.82
4482 9680 6.320944 CAAAAGGGTCAAAACACCAAATTTG 58.679 36.000 11.40 11.40 38.32 2.32
4483 9681 3.540617 AGGGTCAAAACACCAAATTTGC 58.459 40.909 12.92 0.00 38.32 3.68
4484 9682 2.616376 GGGTCAAAACACCAAATTTGCC 59.384 45.455 12.92 5.05 38.32 4.52
4485 9683 2.616376 GGTCAAAACACCAAATTTGCCC 59.384 45.455 12.92 0.00 36.66 5.36
4517 9715 2.611971 GCTAGATTGGTGTTGGTGACGA 60.612 50.000 0.00 0.00 0.00 4.20
4538 9736 4.477975 CGCCGACGTCCCACTCTC 62.478 72.222 10.58 0.00 33.53 3.20
4539 9737 3.371063 GCCGACGTCCCACTCTCA 61.371 66.667 10.58 0.00 0.00 3.27
4545 9743 2.676176 CGACGTCCCACTCTCACTACTA 60.676 54.545 10.58 0.00 0.00 1.82
4548 9746 2.419324 CGTCCCACTCTCACTACTACAC 59.581 54.545 0.00 0.00 0.00 2.90
4564 9770 4.864726 ACTACACGAACCCCTCTACTTAT 58.135 43.478 0.00 0.00 0.00 1.73
4567 9773 3.028850 CACGAACCCCTCTACTTATGGA 58.971 50.000 0.00 0.00 0.00 3.41
4570 10107 3.294214 GAACCCCTCTACTTATGGACGA 58.706 50.000 0.00 0.00 0.00 4.20
4578 10115 2.103537 ACTTATGGACGAAAACCCCG 57.896 50.000 0.00 0.00 0.00 5.73
4585 10122 1.528339 ACGAAAACCCCGTCCAGTT 59.472 52.632 0.00 0.00 34.97 3.16
4586 10123 0.107066 ACGAAAACCCCGTCCAGTTT 60.107 50.000 0.00 0.00 37.80 2.66
4587 10124 0.589708 CGAAAACCCCGTCCAGTTTC 59.410 55.000 0.00 0.00 35.19 2.78
4588 10125 1.812708 CGAAAACCCCGTCCAGTTTCT 60.813 52.381 0.00 0.00 35.19 2.52
4589 10126 1.878088 GAAAACCCCGTCCAGTTTCTC 59.122 52.381 0.00 0.00 35.19 2.87
4636 10236 0.185901 ACCAAGGTCATGCAACTGGT 59.814 50.000 0.00 0.00 0.00 4.00
4666 10266 3.002965 GGGCGCACCACTGTTAATATTAC 59.997 47.826 10.83 0.00 39.85 1.89
4667 10267 3.875134 GGCGCACCACTGTTAATATTACT 59.125 43.478 10.83 0.00 35.26 2.24
4668 10268 4.260620 GGCGCACCACTGTTAATATTACTG 60.261 45.833 10.83 0.00 35.26 2.74
4669 10269 4.260620 GCGCACCACTGTTAATATTACTGG 60.261 45.833 0.30 1.18 0.00 4.00
4670 10270 4.873827 CGCACCACTGTTAATATTACTGGT 59.126 41.667 0.00 1.76 0.00 4.00
4671 10271 5.220586 CGCACCACTGTTAATATTACTGGTG 60.221 44.000 22.55 22.55 46.66 4.17
4672 10272 5.878116 GCACCACTGTTAATATTACTGGTGA 59.122 40.000 26.76 2.83 46.81 4.02
4673 10273 6.373216 GCACCACTGTTAATATTACTGGTGAA 59.627 38.462 26.76 3.70 46.81 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 4.235360 ACATGTACGAGACTTTGCAGTAC 58.765 43.478 0.00 3.83 38.40 2.73
162 205 4.374607 GCGAAACAAATTAAACAAGGCGTC 60.375 41.667 0.00 0.00 0.00 5.19
221 264 6.166279 TCACTTTGTTCCTATGCTACTCAAG 58.834 40.000 0.00 0.00 0.00 3.02
222 265 6.109156 TCACTTTGTTCCTATGCTACTCAA 57.891 37.500 0.00 0.00 0.00 3.02
223 266 5.738619 TCACTTTGTTCCTATGCTACTCA 57.261 39.130 0.00 0.00 0.00 3.41
224 267 6.341316 TCATCACTTTGTTCCTATGCTACTC 58.659 40.000 0.00 0.00 0.00 2.59
225 268 6.299805 TCATCACTTTGTTCCTATGCTACT 57.700 37.500 0.00 0.00 0.00 2.57
226 269 5.007136 GCTCATCACTTTGTTCCTATGCTAC 59.993 44.000 0.00 0.00 0.00 3.58
227 270 5.118990 GCTCATCACTTTGTTCCTATGCTA 58.881 41.667 0.00 0.00 0.00 3.49
228 271 3.944015 GCTCATCACTTTGTTCCTATGCT 59.056 43.478 0.00 0.00 0.00 3.79
257 300 1.675641 GATGACCAAAGGTGCCGCT 60.676 57.895 0.00 0.00 35.25 5.52
327 370 4.344978 ACTACTGTGTTCATCCTAGCTGA 58.655 43.478 0.00 0.00 0.00 4.26
412 456 2.361104 GCCCGAAGCATTCCACCA 60.361 61.111 0.00 0.00 43.81 4.17
450 494 2.014857 GGAGGATTTAGCCCGTTTGTC 58.985 52.381 0.00 0.00 0.00 3.18
622 672 9.570468 ACTCTAAAAGTCGTCTATATACATCCA 57.430 33.333 0.00 0.00 30.02 3.41
775 934 6.983906 ATCTGGGAGTGAAAAACTGAAAAT 57.016 33.333 0.00 0.00 40.07 1.82
829 988 3.308530 GTTCAAAACCATGTACAGCTGC 58.691 45.455 15.27 0.00 0.00 5.25
917 1079 4.138487 ACTAAGACGAATGAATCACCCC 57.862 45.455 0.00 0.00 0.00 4.95
937 1099 6.526222 CGAATGCTACAACAGACTCTAAAAC 58.474 40.000 0.00 0.00 0.00 2.43
981 1145 0.696143 TGGTCAAGTGAAGGGTGGGA 60.696 55.000 0.00 0.00 0.00 4.37
1033 1200 0.463620 GATGCTGTGGAGAGGAGGAC 59.536 60.000 0.00 0.00 0.00 3.85
1361 1553 1.884926 GCATCGGAGGGAAAGAGCG 60.885 63.158 0.00 0.00 0.00 5.03
1516 1750 4.591202 CAAACAATGTCATGCTATCCGAC 58.409 43.478 0.00 0.00 0.00 4.79
1525 1759 2.094390 CCCTCCAGCAAACAATGTCATG 60.094 50.000 0.00 0.00 0.00 3.07
1692 1971 2.019984 CACCTTAAGCTGATCCTTGCC 58.980 52.381 0.00 0.00 0.00 4.52
1717 1996 4.164988 ACTTAGAGCAGAACCATAGGCAAT 59.835 41.667 0.00 0.00 0.00 3.56
1722 2001 6.091441 GTGTCAAACTTAGAGCAGAACCATAG 59.909 42.308 0.00 0.00 0.00 2.23
1747 2277 7.715265 ACACAACTGAAGTACTACTGAATTG 57.285 36.000 0.00 0.00 0.00 2.32
1752 2282 5.236478 CCCAAACACAACTGAAGTACTACTG 59.764 44.000 0.00 0.00 0.00 2.74
1778 2311 3.418684 AGTATTTTGTCCAGCGACCTT 57.581 42.857 0.00 0.00 38.32 3.50
1893 2442 8.791327 AAAAACTCACACAATTCAAAGGAAAT 57.209 26.923 0.00 0.00 36.43 2.17
1915 2464 9.702494 CATGATATCTGACTACTCATGCTAAAA 57.298 33.333 3.98 0.00 37.48 1.52
1916 2465 8.309656 CCATGATATCTGACTACTCATGCTAAA 58.690 37.037 3.98 0.00 41.05 1.85
1919 2468 5.337410 GCCATGATATCTGACTACTCATGCT 60.337 44.000 3.98 0.00 41.05 3.79
1920 2469 4.869297 GCCATGATATCTGACTACTCATGC 59.131 45.833 3.98 6.93 41.05 4.06
1921 2470 6.283544 AGCCATGATATCTGACTACTCATG 57.716 41.667 3.98 10.95 41.70 3.07
2336 3451 2.121291 TCAAGTGTGGTGTTTCAGCA 57.879 45.000 0.00 0.00 39.63 4.41
2394 3509 1.860484 GAAGTGAGCTGTTGCAGGGC 61.860 60.000 0.00 0.00 42.74 5.19
2423 3538 1.066573 ACTTGGCTGTGAAGAGGATCG 60.067 52.381 0.00 0.00 42.67 3.69
2476 3591 6.098679 TGACATGTTTGAAGAAAACCAGTTG 58.901 36.000 0.00 0.00 46.47 3.16
2478 3593 5.913137 TGACATGTTTGAAGAAAACCAGT 57.087 34.783 0.00 0.00 46.47 4.00
2505 3620 4.671766 GCATGATCCGCTACGTTTTCTTTT 60.672 41.667 0.00 0.00 0.00 2.27
2562 7276 3.348647 TCCATATGTTCCATATGCCCG 57.651 47.619 15.55 5.93 32.22 6.13
2580 7294 0.244721 GCATTTCAGGTGCCACTTCC 59.755 55.000 0.00 0.00 36.61 3.46
2851 7752 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
2852 7753 4.355549 TCTATTTTGGAACGGAGGGAGTA 58.644 43.478 0.00 0.00 0.00 2.59
2853 7754 3.178865 TCTATTTTGGAACGGAGGGAGT 58.821 45.455 0.00 0.00 0.00 3.85
2854 7755 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
2855 7756 3.521937 ACATCTATTTTGGAACGGAGGGA 59.478 43.478 0.00 0.00 0.00 4.20
2856 7757 3.886123 ACATCTATTTTGGAACGGAGGG 58.114 45.455 0.00 0.00 0.00 4.30
2857 7758 6.113411 ACTAACATCTATTTTGGAACGGAGG 58.887 40.000 0.00 0.00 0.00 4.30
2858 7759 7.762615 TGTACTAACATCTATTTTGGAACGGAG 59.237 37.037 0.00 0.00 0.00 4.63
2859 7760 7.613585 TGTACTAACATCTATTTTGGAACGGA 58.386 34.615 0.00 0.00 0.00 4.69
2860 7761 7.837202 TGTACTAACATCTATTTTGGAACGG 57.163 36.000 0.00 0.00 0.00 4.44
2861 7762 9.755064 CTTTGTACTAACATCTATTTTGGAACG 57.245 33.333 0.00 0.00 34.97 3.95
2871 7772 9.856488 GATGACTCAACTTTGTACTAACATCTA 57.144 33.333 0.00 0.00 34.97 1.98
2872 7773 8.589338 AGATGACTCAACTTTGTACTAACATCT 58.411 33.333 0.00 0.00 34.97 2.90
2873 7774 8.764524 AGATGACTCAACTTTGTACTAACATC 57.235 34.615 0.00 0.00 34.97 3.06
2886 7787 9.829507 CTCCATTCTAAAATAGATGACTCAACT 57.170 33.333 0.00 0.00 34.22 3.16
2887 7788 9.050601 CCTCCATTCTAAAATAGATGACTCAAC 57.949 37.037 0.00 0.00 34.22 3.18
2888 7789 8.213679 CCCTCCATTCTAAAATAGATGACTCAA 58.786 37.037 0.00 0.00 34.22 3.02
2889 7790 7.568738 TCCCTCCATTCTAAAATAGATGACTCA 59.431 37.037 0.00 0.00 34.22 3.41
2890 7791 7.967908 TCCCTCCATTCTAAAATAGATGACTC 58.032 38.462 0.00 0.00 34.22 3.36
2891 7792 7.570607 ACTCCCTCCATTCTAAAATAGATGACT 59.429 37.037 0.00 0.00 34.22 3.41
2892 7793 7.740805 ACTCCCTCCATTCTAAAATAGATGAC 58.259 38.462 0.00 0.00 34.22 3.06
2893 7794 7.937700 ACTCCCTCCATTCTAAAATAGATGA 57.062 36.000 0.00 0.00 34.22 2.92
2894 7795 8.875168 ACTACTCCCTCCATTCTAAAATAGATG 58.125 37.037 0.00 0.00 34.22 2.90
2896 7797 9.589461 CTACTACTCCCTCCATTCTAAAATAGA 57.411 37.037 0.00 0.00 0.00 1.98
2897 7798 8.308207 GCTACTACTCCCTCCATTCTAAAATAG 58.692 40.741 0.00 0.00 0.00 1.73
2898 7799 7.787904 TGCTACTACTCCCTCCATTCTAAAATA 59.212 37.037 0.00 0.00 0.00 1.40
2899 7800 6.615726 TGCTACTACTCCCTCCATTCTAAAAT 59.384 38.462 0.00 0.00 0.00 1.82
2900 7801 5.962031 TGCTACTACTCCCTCCATTCTAAAA 59.038 40.000 0.00 0.00 0.00 1.52
2901 7802 5.525484 TGCTACTACTCCCTCCATTCTAAA 58.475 41.667 0.00 0.00 0.00 1.85
2902 7803 5.138758 TGCTACTACTCCCTCCATTCTAA 57.861 43.478 0.00 0.00 0.00 2.10
2903 7804 4.808767 TGCTACTACTCCCTCCATTCTA 57.191 45.455 0.00 0.00 0.00 2.10
2904 7805 3.689872 TGCTACTACTCCCTCCATTCT 57.310 47.619 0.00 0.00 0.00 2.40
2905 7806 4.965200 AATGCTACTACTCCCTCCATTC 57.035 45.455 0.00 0.00 0.00 2.67
2906 7807 4.721776 TCAAATGCTACTACTCCCTCCATT 59.278 41.667 0.00 0.00 0.00 3.16
2907 7808 4.298626 TCAAATGCTACTACTCCCTCCAT 58.701 43.478 0.00 0.00 0.00 3.41
2908 7809 3.719871 TCAAATGCTACTACTCCCTCCA 58.280 45.455 0.00 0.00 0.00 3.86
2909 7810 4.345257 TCATCAAATGCTACTACTCCCTCC 59.655 45.833 0.00 0.00 0.00 4.30
2910 7811 5.537300 TCATCAAATGCTACTACTCCCTC 57.463 43.478 0.00 0.00 0.00 4.30
2911 7812 7.618019 TTATCATCAAATGCTACTACTCCCT 57.382 36.000 0.00 0.00 0.00 4.20
3178 8089 9.935241 AAGAATTAGCCATATACATACAGACAG 57.065 33.333 0.00 0.00 0.00 3.51
3260 8371 9.100197 ACATTTATTCAGGACCCTTTAATTTGT 57.900 29.630 0.00 0.00 0.00 2.83
3267 8378 7.010160 TCAAGAACATTTATTCAGGACCCTTT 58.990 34.615 0.00 0.00 0.00 3.11
3562 8673 2.504367 GGGTTGTGATAACAGTGCACT 58.496 47.619 15.25 15.25 33.83 4.40
3648 8759 2.100197 TGGAACACCCAGAGAGATACG 58.900 52.381 0.00 0.00 40.82 3.06
3689 8800 0.458260 TGCTCTTACCGCGAATGCTA 59.542 50.000 8.23 0.00 39.65 3.49
3690 8801 0.391130 TTGCTCTTACCGCGAATGCT 60.391 50.000 8.23 0.00 39.65 3.79
3731 8842 6.038714 CCTTTAAGACTGTTTTGCTGACTCTT 59.961 38.462 0.00 0.00 0.00 2.85
3738 8849 2.628178 GCCCCTTTAAGACTGTTTTGCT 59.372 45.455 0.00 0.00 0.00 3.91
3772 8883 1.622811 CAAGGTTGCTCTGGAGACTCT 59.377 52.381 1.74 0.00 0.00 3.24
3790 8901 2.636647 TGTGGAATCTGACACTGCAA 57.363 45.000 0.00 0.00 38.39 4.08
3826 8937 6.253512 GCATAGGACGAATTTGGATGAAAAAC 59.746 38.462 0.00 0.00 0.00 2.43
3851 8967 5.296780 ACTGAAGTTCAAATATATGCACCCG 59.703 40.000 7.06 0.00 0.00 5.28
3853 8969 7.489113 CCAAACTGAAGTTCAAATATATGCACC 59.511 37.037 7.06 0.00 37.25 5.01
3859 8975 9.679661 TCTATGCCAAACTGAAGTTCAAATATA 57.320 29.630 7.06 0.00 37.25 0.86
3904 9022 7.939782 AGTGTGTGATGTTGAACAATGATTTA 58.060 30.769 0.62 0.00 0.00 1.40
3912 9030 4.457257 TGTTGAAGTGTGTGATGTTGAACA 59.543 37.500 0.00 0.00 0.00 3.18
3929 9047 7.601073 TTTGCAATGTTGTAATGTTGTTGAA 57.399 28.000 0.00 0.00 32.91 2.69
3936 9054 7.798596 TTCCAAATTTGCAATGTTGTAATGT 57.201 28.000 12.92 0.00 32.91 2.71
3939 9057 9.716531 TCATATTCCAAATTTGCAATGTTGTAA 57.283 25.926 16.10 10.75 0.00 2.41
3940 9058 9.716531 TTCATATTCCAAATTTGCAATGTTGTA 57.283 25.926 16.10 6.31 0.00 2.41
4034 9232 1.206849 CAAAATTGGCCGCCCTATGTT 59.793 47.619 7.03 0.00 0.00 2.71
4035 9233 0.823460 CAAAATTGGCCGCCCTATGT 59.177 50.000 7.03 0.00 0.00 2.29
4036 9234 0.104671 CCAAAATTGGCCGCCCTATG 59.895 55.000 7.03 0.00 42.21 2.23
4037 9235 2.515288 CCAAAATTGGCCGCCCTAT 58.485 52.632 7.03 0.00 42.21 2.57
4038 9236 4.026300 CCAAAATTGGCCGCCCTA 57.974 55.556 7.03 0.00 42.21 3.53
4047 9245 6.072230 ACAAAAGGGTCAAAACACCAAAATTG 60.072 34.615 0.00 0.00 38.32 2.32
4048 9246 6.007076 ACAAAAGGGTCAAAACACCAAAATT 58.993 32.000 0.00 0.00 38.32 1.82
4049 9247 5.414144 CACAAAAGGGTCAAAACACCAAAAT 59.586 36.000 0.00 0.00 38.32 1.82
4050 9248 4.757149 CACAAAAGGGTCAAAACACCAAAA 59.243 37.500 0.00 0.00 38.32 2.44
4051 9249 4.040461 TCACAAAAGGGTCAAAACACCAAA 59.960 37.500 0.00 0.00 38.32 3.28
4052 9250 3.578716 TCACAAAAGGGTCAAAACACCAA 59.421 39.130 0.00 0.00 38.32 3.67
4053 9251 3.165875 TCACAAAAGGGTCAAAACACCA 58.834 40.909 0.00 0.00 38.32 4.17
4054 9252 3.878160 TCACAAAAGGGTCAAAACACC 57.122 42.857 0.00 0.00 35.42 4.16
4055 9253 5.234752 ACTTTCACAAAAGGGTCAAAACAC 58.765 37.500 3.24 0.00 45.15 3.32
4056 9254 5.476091 ACTTTCACAAAAGGGTCAAAACA 57.524 34.783 3.24 0.00 45.15 2.83
4057 9255 6.034150 CGTAACTTTCACAAAAGGGTCAAAAC 59.966 38.462 3.24 0.00 45.15 2.43
4058 9256 6.094061 CGTAACTTTCACAAAAGGGTCAAAA 58.906 36.000 3.24 0.00 45.15 2.44
4059 9257 5.642686 CGTAACTTTCACAAAAGGGTCAAA 58.357 37.500 3.24 0.00 45.15 2.69
4060 9258 4.439016 GCGTAACTTTCACAAAAGGGTCAA 60.439 41.667 3.24 0.00 45.15 3.18
4061 9259 3.065648 GCGTAACTTTCACAAAAGGGTCA 59.934 43.478 3.24 0.00 45.15 4.02
4062 9260 3.549423 GGCGTAACTTTCACAAAAGGGTC 60.549 47.826 3.24 0.00 45.15 4.46
4063 9261 2.359848 GGCGTAACTTTCACAAAAGGGT 59.640 45.455 3.24 0.00 45.15 4.34
4064 9262 2.359531 TGGCGTAACTTTCACAAAAGGG 59.640 45.455 3.24 0.00 45.15 3.95
4065 9263 3.701532 TGGCGTAACTTTCACAAAAGG 57.298 42.857 3.24 0.00 45.15 3.11
4066 9264 5.977129 AGATTTGGCGTAACTTTCACAAAAG 59.023 36.000 0.00 0.00 46.11 2.27
4067 9265 5.746245 CAGATTTGGCGTAACTTTCACAAAA 59.254 36.000 0.00 0.00 32.44 2.44
4068 9266 5.066634 TCAGATTTGGCGTAACTTTCACAAA 59.933 36.000 0.00 0.00 33.11 2.83
4069 9267 4.576873 TCAGATTTGGCGTAACTTTCACAA 59.423 37.500 0.00 0.00 0.00 3.33
4070 9268 4.024387 GTCAGATTTGGCGTAACTTTCACA 60.024 41.667 0.00 0.00 0.00 3.58
4071 9269 4.464112 GTCAGATTTGGCGTAACTTTCAC 58.536 43.478 0.00 0.00 0.00 3.18
4072 9270 3.500680 GGTCAGATTTGGCGTAACTTTCA 59.499 43.478 0.00 0.00 0.00 2.69
4073 9271 3.119955 GGGTCAGATTTGGCGTAACTTTC 60.120 47.826 0.00 0.00 0.00 2.62
4074 9272 2.817844 GGGTCAGATTTGGCGTAACTTT 59.182 45.455 0.00 0.00 0.00 2.66
4075 9273 2.039879 AGGGTCAGATTTGGCGTAACTT 59.960 45.455 0.00 0.00 0.00 2.66
4076 9274 1.628846 AGGGTCAGATTTGGCGTAACT 59.371 47.619 0.00 0.00 0.00 2.24
4077 9275 1.737793 CAGGGTCAGATTTGGCGTAAC 59.262 52.381 0.00 0.00 0.00 2.50
4078 9276 1.339631 CCAGGGTCAGATTTGGCGTAA 60.340 52.381 0.00 0.00 0.00 3.18
4079 9277 0.251916 CCAGGGTCAGATTTGGCGTA 59.748 55.000 0.00 0.00 0.00 4.42
4080 9278 1.002134 CCAGGGTCAGATTTGGCGT 60.002 57.895 0.00 0.00 0.00 5.68
4081 9279 0.609131 AACCAGGGTCAGATTTGGCG 60.609 55.000 0.00 0.00 33.98 5.69
4082 9280 2.507407 TAACCAGGGTCAGATTTGGC 57.493 50.000 0.00 0.00 33.98 4.52
4083 9281 5.799827 TTTTTAACCAGGGTCAGATTTGG 57.200 39.130 0.00 0.00 36.76 3.28
4105 9303 5.105351 GGAAAATGGTCAGATCCCGATTTTT 60.105 40.000 9.88 6.39 30.19 1.94
4106 9304 4.402474 GGAAAATGGTCAGATCCCGATTTT 59.598 41.667 8.88 8.88 31.44 1.82
4107 9305 3.954258 GGAAAATGGTCAGATCCCGATTT 59.046 43.478 0.00 0.00 0.00 2.17
4108 9306 3.203040 AGGAAAATGGTCAGATCCCGATT 59.797 43.478 0.00 0.00 0.00 3.34
4109 9307 2.780010 AGGAAAATGGTCAGATCCCGAT 59.220 45.455 0.00 0.00 0.00 4.18
4110 9308 2.196595 AGGAAAATGGTCAGATCCCGA 58.803 47.619 0.00 0.00 0.00 5.14
4111 9309 2.717639 AGGAAAATGGTCAGATCCCG 57.282 50.000 0.00 0.00 0.00 5.14
4112 9310 4.455606 CTGTAGGAAAATGGTCAGATCCC 58.544 47.826 0.00 0.00 0.00 3.85
4113 9311 3.879892 GCTGTAGGAAAATGGTCAGATCC 59.120 47.826 0.00 0.00 0.00 3.36
4114 9312 3.879892 GGCTGTAGGAAAATGGTCAGATC 59.120 47.826 0.00 0.00 0.00 2.75
4115 9313 3.682718 CGGCTGTAGGAAAATGGTCAGAT 60.683 47.826 0.00 0.00 0.00 2.90
4116 9314 2.354704 CGGCTGTAGGAAAATGGTCAGA 60.355 50.000 0.00 0.00 0.00 3.27
4117 9315 2.009774 CGGCTGTAGGAAAATGGTCAG 58.990 52.381 0.00 0.00 0.00 3.51
4118 9316 1.339631 CCGGCTGTAGGAAAATGGTCA 60.340 52.381 0.00 0.00 0.00 4.02
4119 9317 1.379527 CCGGCTGTAGGAAAATGGTC 58.620 55.000 0.00 0.00 0.00 4.02
4120 9318 0.034477 CCCGGCTGTAGGAAAATGGT 60.034 55.000 0.00 0.00 0.00 3.55
4121 9319 0.751643 CCCCGGCTGTAGGAAAATGG 60.752 60.000 0.00 0.00 0.00 3.16
4122 9320 0.034477 ACCCCGGCTGTAGGAAAATG 60.034 55.000 0.00 0.00 0.00 2.32
4123 9321 0.255033 GACCCCGGCTGTAGGAAAAT 59.745 55.000 0.00 0.00 0.00 1.82
4124 9322 1.681076 GACCCCGGCTGTAGGAAAA 59.319 57.895 0.00 0.00 0.00 2.29
4125 9323 2.652095 CGACCCCGGCTGTAGGAAA 61.652 63.158 0.00 0.00 0.00 3.13
4126 9324 2.866523 ATCGACCCCGGCTGTAGGAA 62.867 60.000 0.00 0.00 36.24 3.36
4127 9325 3.369410 ATCGACCCCGGCTGTAGGA 62.369 63.158 0.00 0.00 36.24 2.94
4128 9326 2.838225 ATCGACCCCGGCTGTAGG 60.838 66.667 0.00 0.00 36.24 3.18
4129 9327 2.417516 CATCGACCCCGGCTGTAG 59.582 66.667 0.00 0.00 36.24 2.74
4130 9328 3.151710 CCATCGACCCCGGCTGTA 61.152 66.667 0.00 0.00 36.24 2.74
4136 9334 4.280494 CTACCGCCATCGACCCCG 62.280 72.222 0.00 0.00 38.10 5.73
4137 9335 3.925090 CCTACCGCCATCGACCCC 61.925 72.222 0.00 0.00 38.10 4.95
4138 9336 3.925090 CCCTACCGCCATCGACCC 61.925 72.222 0.00 0.00 38.10 4.46
4139 9337 1.183676 ATACCCTACCGCCATCGACC 61.184 60.000 0.00 0.00 38.10 4.79
4140 9338 1.200948 GTATACCCTACCGCCATCGAC 59.799 57.143 0.00 0.00 38.10 4.20
4141 9339 1.538047 GTATACCCTACCGCCATCGA 58.462 55.000 0.00 0.00 38.10 3.59
4142 9340 0.529378 GGTATACCCTACCGCCATCG 59.471 60.000 11.17 0.00 0.00 3.84
4143 9341 1.549170 CTGGTATACCCTACCGCCATC 59.451 57.143 19.42 0.00 40.39 3.51
4144 9342 1.640917 CTGGTATACCCTACCGCCAT 58.359 55.000 19.42 0.00 40.39 4.40
4145 9343 1.117142 GCTGGTATACCCTACCGCCA 61.117 60.000 19.42 0.00 40.39 5.69
4146 9344 1.670015 GCTGGTATACCCTACCGCC 59.330 63.158 19.42 0.00 40.39 6.13
4147 9345 0.830866 AGGCTGGTATACCCTACCGC 60.831 60.000 19.42 12.71 40.39 5.68
4148 9346 2.165998 GTAGGCTGGTATACCCTACCG 58.834 57.143 19.42 4.01 43.31 4.02
4150 9348 2.165998 CGGTAGGCTGGTATACCCTAC 58.834 57.143 19.42 20.02 46.60 3.18
4151 9349 1.548582 GCGGTAGGCTGGTATACCCTA 60.549 57.143 19.42 10.43 38.60 3.53
4152 9350 0.830866 GCGGTAGGCTGGTATACCCT 60.831 60.000 19.42 11.42 38.60 4.34
4153 9351 1.670015 GCGGTAGGCTGGTATACCC 59.330 63.158 19.42 4.54 38.60 3.69
4154 9352 1.117142 TGGCGGTAGGCTGGTATACC 61.117 60.000 15.50 15.50 44.18 2.73
4155 9353 0.754472 TTGGCGGTAGGCTGGTATAC 59.246 55.000 0.00 0.00 44.18 1.47
4156 9354 1.045407 CTTGGCGGTAGGCTGGTATA 58.955 55.000 0.00 0.00 44.18 1.47
4157 9355 1.696097 CCTTGGCGGTAGGCTGGTAT 61.696 60.000 0.00 0.00 44.18 2.73
4158 9356 2.363975 CCTTGGCGGTAGGCTGGTA 61.364 63.158 0.00 0.00 44.18 3.25
4159 9357 3.717294 CCTTGGCGGTAGGCTGGT 61.717 66.667 0.00 0.00 44.18 4.00
4160 9358 3.717294 ACCTTGGCGGTAGGCTGG 61.717 66.667 0.00 0.00 46.73 4.85
4168 9366 4.722700 CACCAGGGACCTTGGCGG 62.723 72.222 22.22 11.21 39.35 6.13
4169 9367 4.722700 CCACCAGGGACCTTGGCG 62.723 72.222 22.22 13.08 40.01 5.69
4171 9369 3.574074 CTGCCACCAGGGACCTTGG 62.574 68.421 20.81 20.81 40.01 3.61
4172 9370 2.034687 CTGCCACCAGGGACCTTG 59.965 66.667 0.00 0.00 40.01 3.61
4180 9378 1.098050 GATAAGTTGCCTGCCACCAG 58.902 55.000 0.00 0.00 38.85 4.00
4181 9379 0.323360 GGATAAGTTGCCTGCCACCA 60.323 55.000 0.00 0.00 0.00 4.17
4182 9380 0.323360 TGGATAAGTTGCCTGCCACC 60.323 55.000 0.00 0.00 0.00 4.61
4183 9381 0.811281 GTGGATAAGTTGCCTGCCAC 59.189 55.000 0.00 0.00 38.98 5.01
4184 9382 0.676466 CGTGGATAAGTTGCCTGCCA 60.676 55.000 0.00 0.00 0.00 4.92
4185 9383 0.676782 ACGTGGATAAGTTGCCTGCC 60.677 55.000 0.00 0.00 0.00 4.85
4186 9384 0.727398 GACGTGGATAAGTTGCCTGC 59.273 55.000 0.00 0.00 0.00 4.85
4187 9385 2.002586 CTGACGTGGATAAGTTGCCTG 58.997 52.381 0.00 0.00 0.00 4.85
4188 9386 1.676014 GCTGACGTGGATAAGTTGCCT 60.676 52.381 0.00 0.00 0.00 4.75
4189 9387 0.727398 GCTGACGTGGATAAGTTGCC 59.273 55.000 0.00 0.00 0.00 4.52
4190 9388 0.370273 CGCTGACGTGGATAAGTTGC 59.630 55.000 0.00 0.00 33.53 4.17
4191 9389 0.370273 GCGCTGACGTGGATAAGTTG 59.630 55.000 0.00 0.00 42.83 3.16
4192 9390 0.037697 TGCGCTGACGTGGATAAGTT 60.038 50.000 9.73 0.00 42.83 2.66
4193 9391 0.458543 CTGCGCTGACGTGGATAAGT 60.459 55.000 9.73 0.00 42.83 2.24
4194 9392 0.458543 ACTGCGCTGACGTGGATAAG 60.459 55.000 21.92 0.97 42.83 1.73
4195 9393 0.735978 CACTGCGCTGACGTGGATAA 60.736 55.000 21.92 0.00 42.83 1.75
4196 9394 1.153842 CACTGCGCTGACGTGGATA 60.154 57.895 21.92 0.00 42.83 2.59
4197 9395 2.433145 CACTGCGCTGACGTGGAT 60.433 61.111 21.92 0.00 42.83 3.41
4200 9398 3.639008 TTGCACTGCGCTGACGTG 61.639 61.111 21.92 16.57 43.06 4.49
4201 9399 3.640000 GTTGCACTGCGCTGACGT 61.640 61.111 21.92 3.81 43.06 4.34
4202 9400 4.374702 GGTTGCACTGCGCTGACG 62.375 66.667 21.92 12.14 43.06 4.35
4203 9401 4.030452 GGGTTGCACTGCGCTGAC 62.030 66.667 21.92 12.58 43.06 3.51
4204 9402 2.878089 TAGGGTTGCACTGCGCTGA 61.878 57.895 21.92 0.00 43.06 4.26
4205 9403 2.358615 TAGGGTTGCACTGCGCTG 60.359 61.111 13.23 13.23 43.06 5.18
4206 9404 2.358737 GTAGGGTTGCACTGCGCT 60.359 61.111 9.73 0.00 43.06 5.92
4207 9405 3.431725 GGTAGGGTTGCACTGCGC 61.432 66.667 0.00 0.00 42.89 6.09
4208 9406 1.741770 GAGGTAGGGTTGCACTGCG 60.742 63.158 0.00 0.00 0.00 5.18
4209 9407 1.377333 GGAGGTAGGGTTGCACTGC 60.377 63.158 0.00 0.00 0.00 4.40
4210 9408 0.321653 GTGGAGGTAGGGTTGCACTG 60.322 60.000 0.00 0.00 33.49 3.66
4211 9409 0.766674 TGTGGAGGTAGGGTTGCACT 60.767 55.000 0.00 0.00 36.70 4.40
4212 9410 0.605589 GTGTGGAGGTAGGGTTGCAC 60.606 60.000 0.00 0.00 36.35 4.57
4213 9411 1.057275 TGTGTGGAGGTAGGGTTGCA 61.057 55.000 0.00 0.00 0.00 4.08
4214 9412 0.321653 CTGTGTGGAGGTAGGGTTGC 60.322 60.000 0.00 0.00 0.00 4.17
4215 9413 0.324943 CCTGTGTGGAGGTAGGGTTG 59.675 60.000 0.00 0.00 38.35 3.77
4216 9414 1.489560 GCCTGTGTGGAGGTAGGGTT 61.490 60.000 0.00 0.00 38.35 4.11
4217 9415 1.918800 GCCTGTGTGGAGGTAGGGT 60.919 63.158 0.00 0.00 38.35 4.34
4218 9416 0.325296 TAGCCTGTGTGGAGGTAGGG 60.325 60.000 0.00 0.00 38.35 3.53
4219 9417 1.115467 CTAGCCTGTGTGGAGGTAGG 58.885 60.000 0.00 0.00 38.35 3.18
4220 9418 0.461961 GCTAGCCTGTGTGGAGGTAG 59.538 60.000 2.29 0.00 38.35 3.18
4221 9419 1.320344 CGCTAGCCTGTGTGGAGGTA 61.320 60.000 9.66 0.00 38.35 3.08
4222 9420 2.650116 CGCTAGCCTGTGTGGAGGT 61.650 63.158 9.66 0.00 38.35 3.85
4223 9421 2.185350 CGCTAGCCTGTGTGGAGG 59.815 66.667 9.66 0.00 38.35 4.30
4224 9422 1.320344 TACCGCTAGCCTGTGTGGAG 61.320 60.000 9.66 0.00 38.35 3.86
4225 9423 1.304630 TACCGCTAGCCTGTGTGGA 60.305 57.895 9.66 0.00 38.35 4.02
4226 9424 1.141881 CTACCGCTAGCCTGTGTGG 59.858 63.158 9.66 5.80 39.53 4.17
4227 9425 1.519455 GCTACCGCTAGCCTGTGTG 60.519 63.158 9.66 5.94 39.79 3.82
4228 9426 2.893398 GCTACCGCTAGCCTGTGT 59.107 61.111 9.66 4.18 39.79 3.72
4234 9432 0.033504 TTGCATAGGCTACCGCTAGC 59.966 55.000 16.22 4.06 44.34 3.42
4235 9433 1.784525 GTTGCATAGGCTACCGCTAG 58.215 55.000 16.22 0.00 39.43 3.42
4236 9434 3.980583 GTTGCATAGGCTACCGCTA 57.019 52.632 16.22 8.18 39.43 4.26
4237 9435 4.857251 GTTGCATAGGCTACCGCT 57.143 55.556 16.22 0.00 39.43 5.52
4241 9439 1.270147 CGGTAGGGTTGCATAGGCTAC 60.270 57.143 5.37 5.37 43.69 3.58
4242 9440 1.045407 CGGTAGGGTTGCATAGGCTA 58.955 55.000 0.00 0.00 41.91 3.93
4243 9441 1.830145 CGGTAGGGTTGCATAGGCT 59.170 57.895 0.00 0.00 41.91 4.58
4244 9442 1.892391 GCGGTAGGGTTGCATAGGC 60.892 63.158 0.00 0.00 41.68 3.93
4245 9443 1.227853 GGCGGTAGGGTTGCATAGG 60.228 63.158 0.00 0.00 0.00 2.57
4246 9444 1.594293 CGGCGGTAGGGTTGCATAG 60.594 63.158 0.00 0.00 0.00 2.23
4247 9445 2.023414 CTCGGCGGTAGGGTTGCATA 62.023 60.000 7.21 0.00 0.00 3.14
4248 9446 3.385749 CTCGGCGGTAGGGTTGCAT 62.386 63.158 7.21 0.00 0.00 3.96
4249 9447 4.077184 CTCGGCGGTAGGGTTGCA 62.077 66.667 7.21 0.00 0.00 4.08
4250 9448 4.832608 CCTCGGCGGTAGGGTTGC 62.833 72.222 7.21 0.00 0.00 4.17
4251 9449 3.387947 ACCTCGGCGGTAGGGTTG 61.388 66.667 17.66 0.00 46.73 3.77
4252 9450 3.387947 CACCTCGGCGGTAGGGTT 61.388 66.667 17.66 0.00 46.94 4.11
4273 9471 3.773404 TTGTACCCGCCTACCGCC 61.773 66.667 0.00 0.00 35.03 6.13
4274 9472 2.510012 GTTGTACCCGCCTACCGC 60.510 66.667 0.00 0.00 35.03 5.68
4275 9473 2.202650 CGTTGTACCCGCCTACCG 60.203 66.667 0.00 0.00 0.00 4.02
4276 9474 1.015607 CAACGTTGTACCCGCCTACC 61.016 60.000 20.21 0.00 0.00 3.18
4277 9475 0.319813 ACAACGTTGTACCCGCCTAC 60.320 55.000 31.49 0.00 40.16 3.18
4278 9476 1.252175 TACAACGTTGTACCCGCCTA 58.748 50.000 31.86 13.81 42.35 3.93
4279 9477 0.609662 ATACAACGTTGTACCCGCCT 59.390 50.000 36.24 20.71 45.47 5.52
4280 9478 1.441738 AATACAACGTTGTACCCGCC 58.558 50.000 36.24 0.00 45.47 6.13
4281 9479 2.479656 TCAAATACAACGTTGTACCCGC 59.520 45.455 36.24 0.00 45.47 6.13
4282 9480 4.932268 ATCAAATACAACGTTGTACCCG 57.068 40.909 36.24 26.79 45.47 5.28
4283 9481 6.973229 AGTATCAAATACAACGTTGTACCC 57.027 37.500 36.24 20.48 45.47 3.69
4284 9482 9.357652 TCTAAGTATCAAATACAACGTTGTACC 57.642 33.333 36.24 19.92 45.47 3.34
4287 9485 9.485206 AGTTCTAAGTATCAAATACAACGTTGT 57.515 29.630 33.99 33.99 44.86 3.32
4300 9498 9.706691 CCTACTGTCAAAAAGTTCTAAGTATCA 57.293 33.333 0.00 0.00 0.00 2.15
4301 9499 9.152595 CCCTACTGTCAAAAAGTTCTAAGTATC 57.847 37.037 0.00 0.00 0.00 2.24
4302 9500 7.606839 GCCCTACTGTCAAAAAGTTCTAAGTAT 59.393 37.037 0.00 0.00 0.00 2.12
4303 9501 6.932960 GCCCTACTGTCAAAAAGTTCTAAGTA 59.067 38.462 0.00 0.00 0.00 2.24
4304 9502 5.763698 GCCCTACTGTCAAAAAGTTCTAAGT 59.236 40.000 0.00 0.00 0.00 2.24
4305 9503 5.763204 TGCCCTACTGTCAAAAAGTTCTAAG 59.237 40.000 0.00 0.00 0.00 2.18
4306 9504 5.686753 TGCCCTACTGTCAAAAAGTTCTAA 58.313 37.500 0.00 0.00 0.00 2.10
4307 9505 5.298989 TGCCCTACTGTCAAAAAGTTCTA 57.701 39.130 0.00 0.00 0.00 2.10
4308 9506 4.164843 TGCCCTACTGTCAAAAAGTTCT 57.835 40.909 0.00 0.00 0.00 3.01
4309 9507 4.798574 CATGCCCTACTGTCAAAAAGTTC 58.201 43.478 0.00 0.00 0.00 3.01
4310 9508 3.005791 GCATGCCCTACTGTCAAAAAGTT 59.994 43.478 6.36 0.00 0.00 2.66
4311 9509 2.558359 GCATGCCCTACTGTCAAAAAGT 59.442 45.455 6.36 0.00 0.00 2.66
4312 9510 2.414559 CGCATGCCCTACTGTCAAAAAG 60.415 50.000 13.15 0.00 0.00 2.27
4313 9511 1.539388 CGCATGCCCTACTGTCAAAAA 59.461 47.619 13.15 0.00 0.00 1.94
4314 9512 1.164411 CGCATGCCCTACTGTCAAAA 58.836 50.000 13.15 0.00 0.00 2.44
4315 9513 0.323302 TCGCATGCCCTACTGTCAAA 59.677 50.000 13.15 0.00 0.00 2.69
4316 9514 0.391130 GTCGCATGCCCTACTGTCAA 60.391 55.000 13.15 0.00 0.00 3.18
4317 9515 1.218047 GTCGCATGCCCTACTGTCA 59.782 57.895 13.15 0.00 0.00 3.58
4318 9516 1.521681 GGTCGCATGCCCTACTGTC 60.522 63.158 13.15 0.00 0.00 3.51
4319 9517 2.584608 GGTCGCATGCCCTACTGT 59.415 61.111 13.15 0.00 0.00 3.55
4320 9518 2.203070 GGGTCGCATGCCCTACTG 60.203 66.667 13.15 0.00 42.81 2.74
4325 9523 2.203070 CAGTAGGGTCGCATGCCC 60.203 66.667 13.15 8.39 46.43 5.36
4326 9524 2.897350 GCAGTAGGGTCGCATGCC 60.897 66.667 13.15 0.00 0.00 4.40
4327 9525 2.897350 GGCAGTAGGGTCGCATGC 60.897 66.667 7.91 7.91 36.16 4.06
4328 9526 1.078497 TTGGCAGTAGGGTCGCATG 60.078 57.895 0.00 0.00 0.00 4.06
4329 9527 1.221840 CTTGGCAGTAGGGTCGCAT 59.778 57.895 0.00 0.00 0.00 4.73
4330 9528 2.662596 CTTGGCAGTAGGGTCGCA 59.337 61.111 0.00 0.00 0.00 5.10
4331 9529 2.125106 CCTTGGCAGTAGGGTCGC 60.125 66.667 0.00 0.00 0.00 5.19
4332 9530 2.584608 CCCTTGGCAGTAGGGTCG 59.415 66.667 15.06 0.00 46.16 4.79
4344 9542 4.530857 CTACCGCCGAGGCCCTTG 62.531 72.222 8.72 0.00 46.52 3.61
4351 9549 0.956633 TATAACTGCCTACCGCCGAG 59.043 55.000 0.00 0.00 36.24 4.63
4352 9550 0.670162 GTATAACTGCCTACCGCCGA 59.330 55.000 0.00 0.00 36.24 5.54
4353 9551 0.319297 GGTATAACTGCCTACCGCCG 60.319 60.000 0.00 0.00 36.24 6.46
4354 9552 0.034476 GGGTATAACTGCCTACCGCC 59.966 60.000 0.00 0.00 38.64 6.13
4355 9553 1.046204 AGGGTATAACTGCCTACCGC 58.954 55.000 0.00 0.00 38.64 5.68
4356 9554 3.255149 CAGTAGGGTATAACTGCCTACCG 59.745 52.174 0.00 0.00 38.64 4.02
4357 9555 4.868314 CAGTAGGGTATAACTGCCTACC 57.132 50.000 0.00 0.00 35.13 3.18
4363 9561 1.270147 GCCGGCAGTAGGGTATAACTG 60.270 57.143 24.80 0.00 44.79 3.16
4364 9562 1.046204 GCCGGCAGTAGGGTATAACT 58.954 55.000 24.80 0.00 0.00 2.24
4365 9563 0.754472 TGCCGGCAGTAGGGTATAAC 59.246 55.000 29.03 0.00 0.00 1.89
4366 9564 1.139455 GTTGCCGGCAGTAGGGTATAA 59.861 52.381 30.75 7.77 0.00 0.98
4367 9565 0.754472 GTTGCCGGCAGTAGGGTATA 59.246 55.000 30.75 8.65 0.00 1.47
4368 9566 1.525442 GTTGCCGGCAGTAGGGTAT 59.475 57.895 30.75 0.00 0.00 2.73
4369 9567 2.662070 GGTTGCCGGCAGTAGGGTA 61.662 63.158 30.75 10.41 0.00 3.69
4370 9568 4.029809 GGTTGCCGGCAGTAGGGT 62.030 66.667 30.75 0.00 0.00 4.34
4371 9569 4.796495 GGGTTGCCGGCAGTAGGG 62.796 72.222 30.75 0.00 0.00 3.53
4372 9570 3.717294 AGGGTTGCCGGCAGTAGG 61.717 66.667 30.75 0.00 0.00 3.18
4373 9571 2.436646 CAGGGTTGCCGGCAGTAG 60.437 66.667 30.75 15.07 0.00 2.57
4374 9572 2.824880 AACAGGGTTGCCGGCAGTA 61.825 57.895 30.75 13.98 0.00 2.74
4375 9573 4.204028 AACAGGGTTGCCGGCAGT 62.204 61.111 30.75 20.90 0.00 4.40
4376 9574 3.673484 CAACAGGGTTGCCGGCAG 61.673 66.667 30.75 20.16 0.00 4.85
4386 9584 1.427753 ACCCTTTTCCTACCAACAGGG 59.572 52.381 3.31 3.31 45.85 4.45
4387 9585 2.107552 TGACCCTTTTCCTACCAACAGG 59.892 50.000 0.00 0.00 37.00 4.00
4388 9586 3.072476 TCTGACCCTTTTCCTACCAACAG 59.928 47.826 0.00 0.00 0.00 3.16
4389 9587 3.050089 TCTGACCCTTTTCCTACCAACA 58.950 45.455 0.00 0.00 0.00 3.33
4390 9588 3.782656 TCTGACCCTTTTCCTACCAAC 57.217 47.619 0.00 0.00 0.00 3.77
4391 9589 4.175962 AGATCTGACCCTTTTCCTACCAA 58.824 43.478 0.00 0.00 0.00 3.67
4392 9590 3.803340 AGATCTGACCCTTTTCCTACCA 58.197 45.455 0.00 0.00 0.00 3.25
4393 9591 4.225267 TCAAGATCTGACCCTTTTCCTACC 59.775 45.833 0.00 0.00 0.00 3.18
4394 9592 5.422214 TCAAGATCTGACCCTTTTCCTAC 57.578 43.478 0.00 0.00 0.00 3.18
4395 9593 6.448369 TTTCAAGATCTGACCCTTTTCCTA 57.552 37.500 0.00 0.00 32.21 2.94
4396 9594 5.324832 TTTCAAGATCTGACCCTTTTCCT 57.675 39.130 0.00 0.00 32.21 3.36
4397 9595 6.405278 TTTTTCAAGATCTGACCCTTTTCC 57.595 37.500 0.00 0.00 32.21 3.13
4422 9620 3.138098 ACATTTGGCCCTGGTTCATTTTT 59.862 39.130 0.00 0.00 0.00 1.94
4423 9621 2.710471 ACATTTGGCCCTGGTTCATTTT 59.290 40.909 0.00 0.00 0.00 1.82
4424 9622 2.337849 ACATTTGGCCCTGGTTCATTT 58.662 42.857 0.00 0.00 0.00 2.32
4425 9623 2.028561 ACATTTGGCCCTGGTTCATT 57.971 45.000 0.00 0.00 0.00 2.57
4426 9624 1.624813 CAACATTTGGCCCTGGTTCAT 59.375 47.619 0.00 0.00 0.00 2.57
4427 9625 1.047002 CAACATTTGGCCCTGGTTCA 58.953 50.000 0.00 0.00 0.00 3.18
4428 9626 0.320683 GCAACATTTGGCCCTGGTTC 60.321 55.000 0.00 0.00 0.00 3.62
4429 9627 0.763986 AGCAACATTTGGCCCTGGTT 60.764 50.000 0.00 0.00 0.00 3.67
4430 9628 0.763986 AAGCAACATTTGGCCCTGGT 60.764 50.000 0.00 0.00 0.00 4.00
4431 9629 1.265236 TAAGCAACATTTGGCCCTGG 58.735 50.000 0.00 0.00 0.00 4.45
4432 9630 2.299867 AGTTAAGCAACATTTGGCCCTG 59.700 45.455 0.00 0.00 37.10 4.45
4433 9631 2.608623 AGTTAAGCAACATTTGGCCCT 58.391 42.857 0.00 0.00 37.10 5.19
4434 9632 3.401033 AAGTTAAGCAACATTTGGCCC 57.599 42.857 0.00 0.00 37.10 5.80
4435 9633 3.428534 CGAAAGTTAAGCAACATTTGGCC 59.571 43.478 0.00 0.00 37.10 5.36
4436 9634 3.121025 GCGAAAGTTAAGCAACATTTGGC 60.121 43.478 0.00 0.00 37.10 4.52
4437 9635 4.047822 TGCGAAAGTTAAGCAACATTTGG 58.952 39.130 3.08 0.00 38.01 3.28
4438 9636 5.633996 TTGCGAAAGTTAAGCAACATTTG 57.366 34.783 12.20 0.00 44.66 2.32
4445 9643 2.691011 ACCCTTTTGCGAAAGTTAAGCA 59.309 40.909 22.22 1.56 40.53 3.91
4446 9644 3.243267 TGACCCTTTTGCGAAAGTTAAGC 60.243 43.478 22.22 9.44 40.53 3.09
4447 9645 4.561735 TGACCCTTTTGCGAAAGTTAAG 57.438 40.909 22.22 11.91 40.53 1.85
4448 9646 4.985538 TTGACCCTTTTGCGAAAGTTAA 57.014 36.364 22.22 8.39 40.53 2.01
4449 9647 4.985538 TTTGACCCTTTTGCGAAAGTTA 57.014 36.364 22.22 2.93 40.53 2.24
4450 9648 3.878160 TTTGACCCTTTTGCGAAAGTT 57.122 38.095 22.22 10.83 40.53 2.66
4451 9649 3.056465 TGTTTTGACCCTTTTGCGAAAGT 60.056 39.130 22.22 8.18 40.53 2.66
4452 9650 3.305897 GTGTTTTGACCCTTTTGCGAAAG 59.694 43.478 18.17 18.17 41.56 2.62
4453 9651 3.254892 GTGTTTTGACCCTTTTGCGAAA 58.745 40.909 0.00 0.00 0.00 3.46
4454 9652 2.417515 GGTGTTTTGACCCTTTTGCGAA 60.418 45.455 0.00 0.00 0.00 4.70
4455 9653 1.135333 GGTGTTTTGACCCTTTTGCGA 59.865 47.619 0.00 0.00 0.00 5.10
4456 9654 1.134965 TGGTGTTTTGACCCTTTTGCG 60.135 47.619 0.00 0.00 34.79 4.85
4457 9655 2.682155 TGGTGTTTTGACCCTTTTGC 57.318 45.000 0.00 0.00 34.79 3.68
4458 9656 6.320944 CAAATTTGGTGTTTTGACCCTTTTG 58.679 36.000 10.49 0.00 35.34 2.44
4459 9657 5.105957 GCAAATTTGGTGTTTTGACCCTTTT 60.106 36.000 19.47 0.00 35.34 2.27
4460 9658 4.397730 GCAAATTTGGTGTTTTGACCCTTT 59.602 37.500 19.47 0.00 35.34 3.11
4461 9659 3.944650 GCAAATTTGGTGTTTTGACCCTT 59.055 39.130 19.47 0.00 35.34 3.95
4462 9660 3.540617 GCAAATTTGGTGTTTTGACCCT 58.459 40.909 19.47 0.00 35.34 4.34
4463 9661 2.616376 GGCAAATTTGGTGTTTTGACCC 59.384 45.455 19.47 4.57 35.28 4.46
4464 9662 3.961477 GGCAAATTTGGTGTTTTGACC 57.039 42.857 19.47 5.26 35.28 4.02
4465 9663 3.064682 GTGGGCAAATTTGGTGTTTTGAC 59.935 43.478 19.47 0.00 39.61 3.18
4466 9664 3.274288 GTGGGCAAATTTGGTGTTTTGA 58.726 40.909 19.47 0.00 35.34 2.69
4467 9665 3.012518 TGTGGGCAAATTTGGTGTTTTG 58.987 40.909 19.47 0.00 36.21 2.44
4468 9666 3.356529 TGTGGGCAAATTTGGTGTTTT 57.643 38.095 19.47 0.00 0.00 2.43
4469 9667 3.574354 ATGTGGGCAAATTTGGTGTTT 57.426 38.095 19.47 0.00 0.00 2.83
4470 9668 3.007831 CCTATGTGGGCAAATTTGGTGTT 59.992 43.478 19.47 0.00 0.00 3.32
4471 9669 2.566724 CCTATGTGGGCAAATTTGGTGT 59.433 45.455 19.47 0.00 0.00 4.16
4472 9670 3.249986 CCTATGTGGGCAAATTTGGTG 57.750 47.619 19.47 0.00 0.00 4.17
4484 9682 2.551721 CCAATCTAGCAGCCCTATGTGG 60.552 54.545 0.00 0.00 0.00 4.17
4485 9683 2.105477 ACCAATCTAGCAGCCCTATGTG 59.895 50.000 0.00 0.00 0.00 3.21
4521 9719 4.477975 GAGAGTGGGACGTCGGCG 62.478 72.222 8.42 8.42 44.93 6.46
4537 9735 2.040813 AGAGGGGTTCGTGTAGTAGTGA 59.959 50.000 0.00 0.00 0.00 3.41
4538 9736 2.444421 AGAGGGGTTCGTGTAGTAGTG 58.556 52.381 0.00 0.00 0.00 2.74
4539 9737 2.895242 AGAGGGGTTCGTGTAGTAGT 57.105 50.000 0.00 0.00 0.00 2.73
4545 9743 2.764572 CCATAAGTAGAGGGGTTCGTGT 59.235 50.000 0.00 0.00 0.00 4.49
4548 9746 2.034305 CGTCCATAAGTAGAGGGGTTCG 59.966 54.545 0.00 0.00 0.00 3.95
4567 9773 0.107066 AAACTGGACGGGGTTTTCGT 60.107 50.000 0.00 0.00 44.03 3.85
4570 10107 1.812708 CGAGAAACTGGACGGGGTTTT 60.813 52.381 0.00 0.00 36.04 2.43
4578 10115 1.016653 GCTGGAGCGAGAAACTGGAC 61.017 60.000 0.00 0.00 0.00 4.02
4581 10118 0.739112 GAGGCTGGAGCGAGAAACTG 60.739 60.000 0.00 0.00 43.26 3.16
4585 10122 0.687354 AAAAGAGGCTGGAGCGAGAA 59.313 50.000 0.00 0.00 43.26 2.87
4586 10123 0.036952 CAAAAGAGGCTGGAGCGAGA 60.037 55.000 0.00 0.00 43.26 4.04
4587 10124 0.036952 TCAAAAGAGGCTGGAGCGAG 60.037 55.000 0.00 0.00 43.26 5.03
4588 10125 0.320771 GTCAAAAGAGGCTGGAGCGA 60.321 55.000 0.00 0.00 43.26 4.93
4589 10126 1.301677 GGTCAAAAGAGGCTGGAGCG 61.302 60.000 0.00 0.00 43.26 5.03
4615 10215 2.158534 ACCAGTTGCATGACCTTGGTAA 60.159 45.455 9.72 0.00 37.17 2.85
4636 10236 3.152865 TGGTGCGCCCACTAGAAA 58.847 55.556 15.15 0.00 41.75 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.