Multiple sequence alignment - TraesCS2D01G371500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G371500 chr2D 100.000 3681 0 0 1 3681 475875804 475879484 0.000000e+00 6798.0
1 TraesCS2D01G371500 chr2D 95.442 1470 42 15 445 1901 475984201 475985658 0.000000e+00 2320.0
2 TraesCS2D01G371500 chr2D 87.204 1477 97 37 693 2142 475498830 475500241 0.000000e+00 1596.0
3 TraesCS2D01G371500 chr2D 88.931 262 25 3 3329 3587 87248651 87248911 1.650000e-83 320.0
4 TraesCS2D01G371500 chr2D 90.000 130 13 0 2348 2477 475500447 475500576 6.320000e-38 169.0
5 TraesCS2D01G371500 chr2D 94.545 110 4 2 2478 2587 475500783 475500890 6.320000e-38 169.0
6 TraesCS2D01G371500 chr2D 92.105 76 5 1 3599 3673 339357127 339357052 5.030000e-19 106.0
7 TraesCS2D01G371500 chr2B 91.039 1473 103 18 445 1901 556675585 556677044 0.000000e+00 1962.0
8 TraesCS2D01G371500 chr2B 87.937 1202 132 10 2478 3673 556597498 556598692 0.000000e+00 1404.0
9 TraesCS2D01G371500 chr2B 87.990 1199 129 10 2478 3673 556558082 556559268 0.000000e+00 1402.0
10 TraesCS2D01G371500 chr2B 83.912 1411 111 46 775 2142 556595451 556596788 0.000000e+00 1242.0
11 TraesCS2D01G371500 chr2B 87.953 1021 82 20 1131 2140 556517293 556518283 0.000000e+00 1166.0
12 TraesCS2D01G371500 chr2B 79.127 527 97 13 2602 3119 790502465 790502987 5.850000e-93 351.0
13 TraesCS2D01G371500 chr2B 88.679 265 20 5 3328 3587 139806292 139806551 7.670000e-82 315.0
14 TraesCS2D01G371500 chr2B 92.308 195 10 4 884 1074 556517088 556517281 4.680000e-69 272.0
15 TraesCS2D01G371500 chr2B 88.649 185 18 1 2138 2319 556596814 556596998 4.780000e-54 222.0
16 TraesCS2D01G371500 chr2B 84.043 94 11 2 693 782 556516988 556517081 1.820000e-13 87.9
17 TraesCS2D01G371500 chr2B 86.364 66 5 1 685 750 556595395 556595456 6.600000e-08 69.4
18 TraesCS2D01G371500 chr2A 89.636 1264 80 25 656 1901 617812442 617813672 0.000000e+00 1561.0
19 TraesCS2D01G371500 chr2A 84.540 1436 116 42 890 2281 617730579 617731952 0.000000e+00 1325.0
20 TraesCS2D01G371500 chr2A 86.720 1122 123 17 2478 3585 617789456 617790565 0.000000e+00 1223.0
21 TraesCS2D01G371500 chr2A 88.767 730 66 8 1424 2142 617762324 617763048 0.000000e+00 880.0
22 TraesCS2D01G371500 chr2A 83.826 643 63 21 2977 3587 617735292 617735925 1.150000e-159 573.0
23 TraesCS2D01G371500 chr2A 87.025 316 28 3 2138 2453 617763074 617763376 9.790000e-91 344.0
24 TraesCS2D01G371500 chr2A 87.687 268 21 8 3329 3587 87446415 87446679 5.970000e-78 302.0
25 TraesCS2D01G371500 chr2A 94.231 104 5 1 2318 2421 617731952 617732054 1.370000e-34 158.0
26 TraesCS2D01G371500 chr2A 91.781 73 5 1 3602 3673 132490868 132490796 2.340000e-17 100.0
27 TraesCS2D01G371500 chr2A 88.158 76 8 1 3599 3673 129108891 129108966 5.060000e-14 89.8
28 TraesCS2D01G371500 chr2A 91.803 61 5 0 321 381 617801972 617802032 6.550000e-13 86.1
29 TraesCS2D01G371500 chr3A 80.412 679 120 11 2603 3276 12025463 12024793 4.240000e-139 505.0
30 TraesCS2D01G371500 chr5D 80.028 706 120 21 2582 3276 365215410 365214715 1.530000e-138 503.0
31 TraesCS2D01G371500 chr5D 91.667 72 4 2 3602 3671 380538233 380538304 8.410000e-17 99.0
32 TraesCS2D01G371500 chr5D 92.308 39 2 1 407 444 557791463 557791501 2.000000e-03 54.7
33 TraesCS2D01G371500 chr1D 80.059 682 117 16 2602 3276 455534525 455533856 4.270000e-134 488.0
34 TraesCS2D01G371500 chr6A 80.907 529 88 13 2755 3278 182471572 182471052 4.430000e-109 405.0
35 TraesCS2D01G371500 chr7D 81.000 500 87 8 2785 3278 35179154 35178657 1.240000e-104 390.0
36 TraesCS2D01G371500 chr7D 88.235 51 3 3 3281 3328 446367171 446367121 1.430000e-04 58.4
37 TraesCS2D01G371500 chr4A 81.356 472 80 8 2813 3278 689668307 689667838 9.650000e-101 377.0
38 TraesCS2D01G371500 chr4A 86.590 261 29 6 3331 3587 668107501 668107243 2.160000e-72 283.0
39 TraesCS2D01G371500 chr4A 82.197 264 41 4 3329 3587 614099849 614099587 4.780000e-54 222.0
40 TraesCS2D01G371500 chr4A 90.000 70 4 3 2522 2590 32065985 32065918 1.820000e-13 87.9
41 TraesCS2D01G371500 chr6B 81.027 448 82 3 1459 1905 473541094 473540649 1.630000e-93 353.0
42 TraesCS2D01G371500 chr4B 86.047 258 29 6 3331 3587 235376067 235376318 1.680000e-68 270.0
43 TraesCS2D01G371500 chr4B 90.323 62 5 1 2522 2583 322696210 322696270 3.050000e-11 80.5
44 TraesCS2D01G371500 chr4D 91.781 73 5 1 3602 3673 114180995 114181067 2.340000e-17 100.0
45 TraesCS2D01G371500 chr1B 90.141 71 6 1 3602 3671 376114421 376114491 1.410000e-14 91.6
46 TraesCS2D01G371500 chr6D 88.889 72 7 1 3602 3672 337083103 337083174 1.820000e-13 87.9
47 TraesCS2D01G371500 chr3B 89.231 65 5 2 2522 2585 805234279 805234216 3.050000e-11 80.5
48 TraesCS2D01G371500 chr5B 88.710 62 6 1 2522 2583 556626583 556626523 1.420000e-09 75.0
49 TraesCS2D01G371500 chr3D 86.567 67 7 2 2517 2583 498404851 498404915 5.100000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G371500 chr2D 475875804 475879484 3680 False 6798.000000 6798 100.000000 1 3681 1 chr2D.!!$F2 3680
1 TraesCS2D01G371500 chr2D 475984201 475985658 1457 False 2320.000000 2320 95.442000 445 1901 1 chr2D.!!$F3 1456
2 TraesCS2D01G371500 chr2D 475498830 475500890 2060 False 644.666667 1596 90.583000 693 2587 3 chr2D.!!$F4 1894
3 TraesCS2D01G371500 chr2B 556675585 556677044 1459 False 1962.000000 1962 91.039000 445 1901 1 chr2B.!!$F3 1456
4 TraesCS2D01G371500 chr2B 556558082 556559268 1186 False 1402.000000 1402 87.990000 2478 3673 1 chr2B.!!$F2 1195
5 TraesCS2D01G371500 chr2B 556595395 556598692 3297 False 734.350000 1404 86.715500 685 3673 4 chr2B.!!$F6 2988
6 TraesCS2D01G371500 chr2B 556516988 556518283 1295 False 508.633333 1166 88.101333 693 2140 3 chr2B.!!$F5 1447
7 TraesCS2D01G371500 chr2B 790502465 790502987 522 False 351.000000 351 79.127000 2602 3119 1 chr2B.!!$F4 517
8 TraesCS2D01G371500 chr2A 617812442 617813672 1230 False 1561.000000 1561 89.636000 656 1901 1 chr2A.!!$F5 1245
9 TraesCS2D01G371500 chr2A 617789456 617790565 1109 False 1223.000000 1223 86.720000 2478 3585 1 chr2A.!!$F3 1107
10 TraesCS2D01G371500 chr2A 617730579 617735925 5346 False 685.333333 1325 87.532333 890 3587 3 chr2A.!!$F6 2697
11 TraesCS2D01G371500 chr2A 617762324 617763376 1052 False 612.000000 880 87.896000 1424 2453 2 chr2A.!!$F7 1029
12 TraesCS2D01G371500 chr3A 12024793 12025463 670 True 505.000000 505 80.412000 2603 3276 1 chr3A.!!$R1 673
13 TraesCS2D01G371500 chr5D 365214715 365215410 695 True 503.000000 503 80.028000 2582 3276 1 chr5D.!!$R1 694
14 TraesCS2D01G371500 chr1D 455533856 455534525 669 True 488.000000 488 80.059000 2602 3276 1 chr1D.!!$R1 674
15 TraesCS2D01G371500 chr6A 182471052 182471572 520 True 405.000000 405 80.907000 2755 3278 1 chr6A.!!$R1 523

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
225 226 0.037326 CGCAGGCTACACCAAGAAGA 60.037 55.0 0.0 0.0 43.14 2.87 F
430 431 0.106819 GGCCTCTGCATCAGAATGGT 60.107 55.0 0.0 0.0 40.18 3.55 F
478 479 0.478072 TTGAGTGGACTGGGCATGTT 59.522 50.0 0.0 0.0 0.00 2.71 F
2282 2455 0.036732 ATGGCATATCAACGGGCGAT 59.963 50.0 0.0 0.0 0.00 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2037 2171 0.810648 TTCCAAATCACGATGCTGCC 59.189 50.000 0.0 0.0 0.00 4.85 R
2282 2455 0.327924 CCAGCACCTACCAATCCACA 59.672 55.000 0.0 0.0 0.00 4.17 R
2332 2508 1.611977 ACAGCTTGCTACTCGTACACA 59.388 47.619 0.0 0.0 0.00 3.72 R
3199 6465 0.409092 AGCAATGAATGGTGGGTGGA 59.591 50.000 0.0 0.0 38.62 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.946950 ACGAGCGATCCACAGTATG 57.053 52.632 0.00 0.00 46.00 2.39
19 20 0.249073 ACGAGCGATCCACAGTATGC 60.249 55.000 0.00 0.00 42.53 3.14
20 21 0.249031 CGAGCGATCCACAGTATGCA 60.249 55.000 0.00 0.00 42.53 3.96
21 22 1.603931 CGAGCGATCCACAGTATGCAT 60.604 52.381 3.79 3.79 42.53 3.96
22 23 1.797046 GAGCGATCCACAGTATGCATG 59.203 52.381 10.16 0.00 42.53 4.06
23 24 1.139654 AGCGATCCACAGTATGCATGT 59.860 47.619 10.16 0.00 42.53 3.21
24 25 1.262417 GCGATCCACAGTATGCATGTG 59.738 52.381 10.16 10.80 46.11 3.21
25 26 1.262417 CGATCCACAGTATGCATGTGC 59.738 52.381 10.16 0.00 45.37 4.57
26 27 1.262417 GATCCACAGTATGCATGTGCG 59.738 52.381 10.16 5.40 45.37 5.34
27 28 0.248843 TCCACAGTATGCATGTGCGA 59.751 50.000 10.16 7.60 45.37 5.10
28 29 0.374758 CCACAGTATGCATGTGCGAC 59.625 55.000 10.16 0.00 45.37 5.19
29 30 0.374758 CACAGTATGCATGTGCGACC 59.625 55.000 10.16 0.00 45.83 4.79
30 31 1.083806 ACAGTATGCATGTGCGACCG 61.084 55.000 10.16 0.00 45.83 4.79
31 32 1.521457 AGTATGCATGTGCGACCGG 60.521 57.895 10.16 0.00 45.83 5.28
32 33 1.520564 GTATGCATGTGCGACCGGA 60.521 57.895 9.46 0.00 45.83 5.14
33 34 1.520564 TATGCATGTGCGACCGGAC 60.521 57.895 9.46 0.00 45.83 4.79
38 39 2.589442 TGTGCGACCGGACAAACC 60.589 61.111 9.46 0.00 43.23 3.27
39 40 3.351416 GTGCGACCGGACAAACCC 61.351 66.667 9.46 0.00 36.45 4.11
40 41 4.629523 TGCGACCGGACAAACCCC 62.630 66.667 9.46 0.00 34.64 4.95
45 46 4.958897 CCGGACAAACCCCGCCAA 62.959 66.667 0.00 0.00 45.24 4.52
46 47 2.675075 CGGACAAACCCCGCCAAT 60.675 61.111 0.00 0.00 40.54 3.16
47 48 2.272447 CGGACAAACCCCGCCAATT 61.272 57.895 0.00 0.00 40.54 2.32
48 49 1.291906 GGACAAACCCCGCCAATTG 59.708 57.895 0.00 0.00 0.00 2.32
49 50 1.374125 GACAAACCCCGCCAATTGC 60.374 57.895 0.00 0.00 0.00 3.56
50 51 2.093537 GACAAACCCCGCCAATTGCA 62.094 55.000 0.00 0.00 41.33 4.08
51 52 1.070445 CAAACCCCGCCAATTGCAA 59.930 52.632 0.00 0.00 41.33 4.08
52 53 1.070615 AAACCCCGCCAATTGCAAC 59.929 52.632 0.00 0.00 41.33 4.17
53 54 1.690219 AAACCCCGCCAATTGCAACA 61.690 50.000 0.00 0.00 41.33 3.33
54 55 1.690219 AACCCCGCCAATTGCAACAA 61.690 50.000 0.00 0.00 41.33 2.83
55 56 1.667510 CCCCGCCAATTGCAACAAC 60.668 57.895 0.00 0.00 41.33 3.32
56 57 1.068753 CCCGCCAATTGCAACAACA 59.931 52.632 0.00 0.00 41.33 3.33
57 58 0.320596 CCCGCCAATTGCAACAACAT 60.321 50.000 0.00 0.00 41.33 2.71
58 59 0.791422 CCGCCAATTGCAACAACATG 59.209 50.000 0.00 0.00 41.33 3.21
59 60 1.604947 CCGCCAATTGCAACAACATGA 60.605 47.619 0.00 0.00 41.33 3.07
60 61 2.133553 CGCCAATTGCAACAACATGAA 58.866 42.857 0.00 0.00 41.33 2.57
61 62 2.156117 CGCCAATTGCAACAACATGAAG 59.844 45.455 0.00 0.00 41.33 3.02
62 63 3.391965 GCCAATTGCAACAACATGAAGA 58.608 40.909 0.00 0.00 40.77 2.87
63 64 3.808726 GCCAATTGCAACAACATGAAGAA 59.191 39.130 0.00 0.00 40.77 2.52
64 65 4.272991 GCCAATTGCAACAACATGAAGAAA 59.727 37.500 0.00 0.00 40.77 2.52
65 66 5.049267 GCCAATTGCAACAACATGAAGAAAT 60.049 36.000 0.00 0.00 40.77 2.17
66 67 6.147492 GCCAATTGCAACAACATGAAGAAATA 59.853 34.615 0.00 0.00 40.77 1.40
67 68 7.307870 GCCAATTGCAACAACATGAAGAAATAA 60.308 33.333 0.00 0.00 40.77 1.40
68 69 8.723311 CCAATTGCAACAACATGAAGAAATAAT 58.277 29.630 0.00 0.00 0.00 1.28
69 70 9.749490 CAATTGCAACAACATGAAGAAATAATC 57.251 29.630 0.00 0.00 0.00 1.75
70 71 7.565450 TTGCAACAACATGAAGAAATAATCG 57.435 32.000 0.00 0.00 0.00 3.34
71 72 6.092092 TGCAACAACATGAAGAAATAATCGG 58.908 36.000 0.00 0.00 0.00 4.18
72 73 6.092748 GCAACAACATGAAGAAATAATCGGT 58.907 36.000 0.00 0.00 0.00 4.69
73 74 6.033831 GCAACAACATGAAGAAATAATCGGTG 59.966 38.462 0.00 0.00 0.00 4.94
74 75 6.817765 ACAACATGAAGAAATAATCGGTGT 57.182 33.333 0.00 0.00 0.00 4.16
75 76 7.214467 ACAACATGAAGAAATAATCGGTGTT 57.786 32.000 0.00 0.00 0.00 3.32
76 77 7.083858 ACAACATGAAGAAATAATCGGTGTTG 58.916 34.615 0.00 15.82 41.30 3.33
77 78 7.040755 ACAACATGAAGAAATAATCGGTGTTGA 60.041 33.333 20.57 0.00 39.86 3.18
78 79 7.076842 ACATGAAGAAATAATCGGTGTTGAG 57.923 36.000 0.00 0.00 0.00 3.02
79 80 6.094048 ACATGAAGAAATAATCGGTGTTGAGG 59.906 38.462 0.00 0.00 0.00 3.86
80 81 5.556915 TGAAGAAATAATCGGTGTTGAGGT 58.443 37.500 0.00 0.00 0.00 3.85
81 82 5.642063 TGAAGAAATAATCGGTGTTGAGGTC 59.358 40.000 0.00 0.00 0.00 3.85
82 83 5.160607 AGAAATAATCGGTGTTGAGGTCA 57.839 39.130 0.00 0.00 0.00 4.02
83 84 5.556915 AGAAATAATCGGTGTTGAGGTCAA 58.443 37.500 0.00 0.00 0.00 3.18
92 93 0.580104 GTTGAGGTCAACGGTGAACG 59.420 55.000 13.90 0.00 46.89 3.95
93 94 0.531090 TTGAGGTCAACGGTGAACGG 60.531 55.000 13.90 0.00 46.89 4.44
94 95 1.666872 GAGGTCAACGGTGAACGGG 60.667 63.158 13.90 0.00 46.89 5.28
95 96 2.091102 GAGGTCAACGGTGAACGGGA 62.091 60.000 13.90 0.00 46.89 5.14
96 97 2.373434 AGGTCAACGGTGAACGGGAC 62.373 60.000 13.90 8.19 46.89 4.46
101 102 2.882876 CGGTGAACGGGACTCGAT 59.117 61.111 0.00 0.00 42.43 3.59
102 103 1.516386 CGGTGAACGGGACTCGATG 60.516 63.158 0.00 0.00 42.43 3.84
103 104 1.153628 GGTGAACGGGACTCGATGG 60.154 63.158 0.00 0.00 42.43 3.51
104 105 1.810030 GTGAACGGGACTCGATGGC 60.810 63.158 0.00 0.00 42.43 4.40
105 106 1.982395 TGAACGGGACTCGATGGCT 60.982 57.895 0.00 0.00 42.43 4.75
106 107 1.218316 GAACGGGACTCGATGGCTT 59.782 57.895 0.00 0.00 42.43 4.35
107 108 1.079127 AACGGGACTCGATGGCTTG 60.079 57.895 0.00 0.00 42.43 4.01
108 109 1.541310 AACGGGACTCGATGGCTTGA 61.541 55.000 0.00 0.00 42.43 3.02
109 110 1.227089 CGGGACTCGATGGCTTGAG 60.227 63.158 0.00 0.00 42.43 3.02
110 111 1.144936 GGGACTCGATGGCTTGAGG 59.855 63.158 6.26 0.00 37.24 3.86
111 112 1.617947 GGGACTCGATGGCTTGAGGT 61.618 60.000 6.26 0.00 37.24 3.85
112 113 0.460987 GGACTCGATGGCTTGAGGTG 60.461 60.000 6.26 0.00 37.24 4.00
113 114 0.532573 GACTCGATGGCTTGAGGTGA 59.467 55.000 6.26 0.00 37.24 4.02
114 115 0.976641 ACTCGATGGCTTGAGGTGAA 59.023 50.000 6.26 0.00 37.24 3.18
115 116 1.066573 ACTCGATGGCTTGAGGTGAAG 60.067 52.381 6.26 0.00 37.24 3.02
116 117 0.250234 TCGATGGCTTGAGGTGAAGG 59.750 55.000 0.00 0.00 0.00 3.46
117 118 0.250234 CGATGGCTTGAGGTGAAGGA 59.750 55.000 0.00 0.00 0.00 3.36
118 119 1.741732 CGATGGCTTGAGGTGAAGGAG 60.742 57.143 0.00 0.00 0.00 3.69
119 120 1.280421 GATGGCTTGAGGTGAAGGAGT 59.720 52.381 0.00 0.00 0.00 3.85
120 121 2.024176 TGGCTTGAGGTGAAGGAGTA 57.976 50.000 0.00 0.00 0.00 2.59
121 122 1.623811 TGGCTTGAGGTGAAGGAGTAC 59.376 52.381 0.00 0.00 0.00 2.73
122 123 1.404315 GGCTTGAGGTGAAGGAGTACG 60.404 57.143 0.00 0.00 0.00 3.67
123 124 1.272769 GCTTGAGGTGAAGGAGTACGT 59.727 52.381 0.00 0.00 0.00 3.57
124 125 2.490903 GCTTGAGGTGAAGGAGTACGTA 59.509 50.000 0.00 0.00 0.00 3.57
125 126 3.427773 GCTTGAGGTGAAGGAGTACGTAG 60.428 52.174 0.00 0.00 0.00 3.51
126 127 3.708403 TGAGGTGAAGGAGTACGTAGA 57.292 47.619 0.00 0.00 0.00 2.59
127 128 3.341823 TGAGGTGAAGGAGTACGTAGAC 58.658 50.000 0.00 0.00 0.00 2.59
128 129 3.008813 TGAGGTGAAGGAGTACGTAGACT 59.991 47.826 0.00 0.00 0.00 3.24
129 130 4.223700 TGAGGTGAAGGAGTACGTAGACTA 59.776 45.833 0.00 0.00 0.00 2.59
130 131 4.512484 AGGTGAAGGAGTACGTAGACTAC 58.488 47.826 0.00 2.24 0.00 2.73
139 140 3.028969 GTAGACTACGGCGGCGAT 58.971 61.111 38.93 23.34 0.00 4.58
140 141 1.358046 GTAGACTACGGCGGCGATT 59.642 57.895 38.93 19.54 0.00 3.34
141 142 0.933509 GTAGACTACGGCGGCGATTG 60.934 60.000 38.93 26.13 0.00 2.67
142 143 1.378882 TAGACTACGGCGGCGATTGT 61.379 55.000 38.93 28.96 0.00 2.71
143 144 1.808390 GACTACGGCGGCGATTGTT 60.808 57.895 38.93 17.88 0.00 2.83
144 145 2.020836 GACTACGGCGGCGATTGTTG 62.021 60.000 38.93 18.30 0.00 3.33
145 146 3.434566 CTACGGCGGCGATTGTTGC 62.435 63.158 38.93 0.00 0.00 4.17
148 149 3.492545 GGCGGCGATTGTTGCGTA 61.493 61.111 12.98 0.00 0.00 4.42
149 150 2.276430 GCGGCGATTGTTGCGTAC 60.276 61.111 12.98 0.00 0.00 3.67
150 151 2.398036 CGGCGATTGTTGCGTACC 59.602 61.111 0.00 0.00 0.00 3.34
151 152 2.384309 CGGCGATTGTTGCGTACCA 61.384 57.895 0.00 0.00 0.00 3.25
152 153 1.870383 GGCGATTGTTGCGTACCAA 59.130 52.632 0.00 0.00 0.00 3.67
153 154 0.238817 GGCGATTGTTGCGTACCAAA 59.761 50.000 0.00 0.00 34.68 3.28
154 155 1.602191 GCGATTGTTGCGTACCAAAG 58.398 50.000 0.00 0.00 34.68 2.77
155 156 1.069500 GCGATTGTTGCGTACCAAAGT 60.069 47.619 0.00 0.00 34.68 2.66
156 157 2.570169 CGATTGTTGCGTACCAAAGTG 58.430 47.619 0.00 0.00 34.68 3.16
157 158 2.032377 CGATTGTTGCGTACCAAAGTGT 60.032 45.455 0.00 0.00 34.68 3.55
158 159 3.547214 CGATTGTTGCGTACCAAAGTGTT 60.547 43.478 0.00 0.00 34.68 3.32
159 160 2.834574 TGTTGCGTACCAAAGTGTTG 57.165 45.000 0.00 0.00 34.68 3.33
167 168 4.157607 CAAAGTGTTGGGAGGCGT 57.842 55.556 0.00 0.00 0.00 5.68
168 169 1.949257 CAAAGTGTTGGGAGGCGTC 59.051 57.895 0.00 0.00 0.00 5.19
169 170 1.597027 AAAGTGTTGGGAGGCGTCG 60.597 57.895 0.00 0.00 0.00 5.12
170 171 2.319890 AAAGTGTTGGGAGGCGTCGT 62.320 55.000 0.00 0.00 0.00 4.34
171 172 1.466025 AAGTGTTGGGAGGCGTCGTA 61.466 55.000 0.00 0.00 0.00 3.43
172 173 1.445582 GTGTTGGGAGGCGTCGTAG 60.446 63.158 0.00 0.00 0.00 3.51
173 174 1.904865 TGTTGGGAGGCGTCGTAGT 60.905 57.895 0.00 0.00 0.00 2.73
174 175 0.608856 TGTTGGGAGGCGTCGTAGTA 60.609 55.000 0.00 0.00 0.00 1.82
175 176 0.100146 GTTGGGAGGCGTCGTAGTAG 59.900 60.000 0.00 0.00 0.00 2.57
176 177 1.033746 TTGGGAGGCGTCGTAGTAGG 61.034 60.000 0.00 0.00 0.00 3.18
177 178 2.192187 GGGAGGCGTCGTAGTAGGG 61.192 68.421 0.00 0.00 0.00 3.53
178 179 1.452833 GGAGGCGTCGTAGTAGGGT 60.453 63.158 0.00 0.00 0.00 4.34
179 180 1.722636 GGAGGCGTCGTAGTAGGGTG 61.723 65.000 0.00 0.00 0.00 4.61
180 181 1.722636 GAGGCGTCGTAGTAGGGTGG 61.723 65.000 0.00 0.00 0.00 4.61
181 182 2.103736 GCGTCGTAGTAGGGTGGC 59.896 66.667 0.00 0.00 0.00 5.01
182 183 2.413142 GCGTCGTAGTAGGGTGGCT 61.413 63.158 0.00 0.00 0.00 4.75
183 184 1.941999 GCGTCGTAGTAGGGTGGCTT 61.942 60.000 0.00 0.00 0.00 4.35
184 185 0.529378 CGTCGTAGTAGGGTGGCTTT 59.471 55.000 0.00 0.00 0.00 3.51
185 186 1.745087 CGTCGTAGTAGGGTGGCTTTA 59.255 52.381 0.00 0.00 0.00 1.85
186 187 2.223433 CGTCGTAGTAGGGTGGCTTTAG 60.223 54.545 0.00 0.00 0.00 1.85
187 188 1.753073 TCGTAGTAGGGTGGCTTTAGC 59.247 52.381 0.00 0.00 41.14 3.09
188 189 1.755380 CGTAGTAGGGTGGCTTTAGCT 59.245 52.381 1.26 0.00 41.70 3.32
189 190 2.954318 CGTAGTAGGGTGGCTTTAGCTA 59.046 50.000 1.26 0.00 41.70 3.32
190 191 3.004524 CGTAGTAGGGTGGCTTTAGCTAG 59.995 52.174 1.26 0.00 41.70 3.42
191 192 2.399580 AGTAGGGTGGCTTTAGCTAGG 58.600 52.381 1.26 0.00 41.70 3.02
192 193 2.023307 AGTAGGGTGGCTTTAGCTAGGA 60.023 50.000 1.26 0.00 41.70 2.94
193 194 1.205055 AGGGTGGCTTTAGCTAGGAC 58.795 55.000 1.26 0.00 41.70 3.85
194 195 0.179081 GGGTGGCTTTAGCTAGGACG 60.179 60.000 1.26 0.00 41.70 4.79
195 196 0.822164 GGTGGCTTTAGCTAGGACGA 59.178 55.000 1.26 0.00 41.70 4.20
196 197 1.471153 GGTGGCTTTAGCTAGGACGAC 60.471 57.143 1.26 0.00 41.70 4.34
197 198 0.822164 TGGCTTTAGCTAGGACGACC 59.178 55.000 0.00 0.00 41.70 4.79
198 199 0.104487 GGCTTTAGCTAGGACGACCC 59.896 60.000 0.00 0.00 41.70 4.46
199 200 2.302531 GGCTTTAGCTAGGACGACCCT 61.303 57.143 0.00 3.27 42.68 4.34
200 201 1.481363 GCTTTAGCTAGGACGACCCTT 59.519 52.381 0.00 0.00 46.51 3.95
201 202 2.738964 GCTTTAGCTAGGACGACCCTTG 60.739 54.545 0.00 3.21 46.51 3.61
202 203 2.519771 TTAGCTAGGACGACCCTTGA 57.480 50.000 0.00 0.00 44.85 3.02
203 204 2.750141 TAGCTAGGACGACCCTTGAT 57.250 50.000 0.00 3.42 44.85 2.57
204 205 1.867363 AGCTAGGACGACCCTTGATT 58.133 50.000 0.00 0.00 44.85 2.57
205 206 1.482593 AGCTAGGACGACCCTTGATTG 59.517 52.381 0.00 0.00 44.85 2.67
206 207 1.941325 CTAGGACGACCCTTGATTGC 58.059 55.000 0.00 0.00 44.85 3.56
207 208 0.174845 TAGGACGACCCTTGATTGCG 59.825 55.000 0.00 0.00 44.85 4.85
208 209 2.750888 GGACGACCCTTGATTGCGC 61.751 63.158 0.00 0.00 0.00 6.09
209 210 2.031919 ACGACCCTTGATTGCGCA 59.968 55.556 5.66 5.66 0.00 6.09
210 211 1.970917 GACGACCCTTGATTGCGCAG 61.971 60.000 11.31 0.00 0.00 5.18
211 212 2.753966 CGACCCTTGATTGCGCAGG 61.754 63.158 11.31 10.18 0.00 4.85
212 213 3.056313 GACCCTTGATTGCGCAGGC 62.056 63.158 11.31 7.47 40.52 4.85
213 214 2.753043 CCCTTGATTGCGCAGGCT 60.753 61.111 11.31 0.00 40.82 4.58
214 215 1.451927 CCCTTGATTGCGCAGGCTA 60.452 57.895 11.31 2.76 40.82 3.93
215 216 1.718757 CCCTTGATTGCGCAGGCTAC 61.719 60.000 11.31 2.32 40.82 3.58
216 217 1.026182 CCTTGATTGCGCAGGCTACA 61.026 55.000 11.31 5.10 40.82 2.74
217 218 0.097674 CTTGATTGCGCAGGCTACAC 59.902 55.000 11.31 0.00 40.82 2.90
218 219 1.305219 TTGATTGCGCAGGCTACACC 61.305 55.000 11.31 0.00 40.82 4.16
219 220 1.745115 GATTGCGCAGGCTACACCA 60.745 57.895 11.31 0.00 43.14 4.17
220 221 1.303236 ATTGCGCAGGCTACACCAA 60.303 52.632 11.31 0.00 43.14 3.67
221 222 1.308069 ATTGCGCAGGCTACACCAAG 61.308 55.000 11.31 0.00 43.14 3.61
222 223 2.047274 GCGCAGGCTACACCAAGA 60.047 61.111 0.30 0.00 43.14 3.02
223 224 1.671054 GCGCAGGCTACACCAAGAA 60.671 57.895 0.30 0.00 43.14 2.52
224 225 1.639298 GCGCAGGCTACACCAAGAAG 61.639 60.000 0.30 0.00 43.14 2.85
225 226 0.037326 CGCAGGCTACACCAAGAAGA 60.037 55.000 0.00 0.00 43.14 2.87
226 227 1.406069 CGCAGGCTACACCAAGAAGAT 60.406 52.381 0.00 0.00 43.14 2.40
227 228 2.012673 GCAGGCTACACCAAGAAGATG 58.987 52.381 0.00 0.00 43.14 2.90
228 229 2.355108 GCAGGCTACACCAAGAAGATGA 60.355 50.000 0.00 0.00 43.14 2.92
229 230 3.265791 CAGGCTACACCAAGAAGATGAC 58.734 50.000 0.00 0.00 43.14 3.06
230 231 2.906389 AGGCTACACCAAGAAGATGACA 59.094 45.455 0.00 0.00 43.14 3.58
231 232 3.327757 AGGCTACACCAAGAAGATGACAA 59.672 43.478 0.00 0.00 43.14 3.18
232 233 3.686726 GGCTACACCAAGAAGATGACAAG 59.313 47.826 0.00 0.00 38.86 3.16
233 234 3.126000 GCTACACCAAGAAGATGACAAGC 59.874 47.826 0.00 0.00 0.00 4.01
234 235 3.498774 ACACCAAGAAGATGACAAGCT 57.501 42.857 0.00 0.00 0.00 3.74
235 236 3.144506 ACACCAAGAAGATGACAAGCTG 58.855 45.455 0.00 0.00 0.00 4.24
236 237 3.144506 CACCAAGAAGATGACAAGCTGT 58.855 45.455 0.00 0.00 0.00 4.40
237 238 3.058432 CACCAAGAAGATGACAAGCTGTG 60.058 47.826 0.00 0.00 0.00 3.66
238 239 3.144506 CCAAGAAGATGACAAGCTGTGT 58.855 45.455 0.00 0.00 45.74 3.72
244 245 3.538841 GACAAGCTGTGTCGGACG 58.461 61.111 11.53 0.00 46.99 4.79
245 246 1.007734 GACAAGCTGTGTCGGACGA 60.008 57.895 11.53 0.00 46.99 4.20
246 247 1.004277 GACAAGCTGTGTCGGACGAG 61.004 60.000 11.53 3.31 46.99 4.18
247 248 1.734477 CAAGCTGTGTCGGACGAGG 60.734 63.158 3.34 0.00 0.00 4.63
248 249 2.201022 AAGCTGTGTCGGACGAGGT 61.201 57.895 3.34 4.89 0.00 3.85
249 250 2.126424 GCTGTGTCGGACGAGGTC 60.126 66.667 3.34 0.00 0.00 3.85
262 263 0.662085 CGAGGTCCGTCTAACTAGCC 59.338 60.000 0.00 0.00 0.00 3.93
263 264 0.662085 GAGGTCCGTCTAACTAGCCG 59.338 60.000 0.00 0.00 0.00 5.52
264 265 1.065436 GGTCCGTCTAACTAGCCGC 59.935 63.158 0.00 0.00 0.00 6.53
265 266 1.065436 GTCCGTCTAACTAGCCGCC 59.935 63.158 0.00 0.00 0.00 6.13
266 267 1.077212 TCCGTCTAACTAGCCGCCT 60.077 57.895 0.00 0.00 0.00 5.52
267 268 1.065928 CCGTCTAACTAGCCGCCTG 59.934 63.158 0.00 0.00 0.00 4.85
268 269 1.589196 CGTCTAACTAGCCGCCTGC 60.589 63.158 0.00 0.00 41.71 4.85
286 287 3.119096 GCACCGCCCGACTTCTTC 61.119 66.667 0.00 0.00 0.00 2.87
287 288 2.434359 CACCGCCCGACTTCTTCC 60.434 66.667 0.00 0.00 0.00 3.46
288 289 3.703127 ACCGCCCGACTTCTTCCC 61.703 66.667 0.00 0.00 0.00 3.97
289 290 4.468689 CCGCCCGACTTCTTCCCC 62.469 72.222 0.00 0.00 0.00 4.81
290 291 4.814294 CGCCCGACTTCTTCCCCG 62.814 72.222 0.00 0.00 0.00 5.73
292 293 4.468689 CCCGACTTCTTCCCCGCC 62.469 72.222 0.00 0.00 0.00 6.13
293 294 3.391382 CCGACTTCTTCCCCGCCT 61.391 66.667 0.00 0.00 0.00 5.52
294 295 2.184579 CGACTTCTTCCCCGCCTC 59.815 66.667 0.00 0.00 0.00 4.70
295 296 2.352032 CGACTTCTTCCCCGCCTCT 61.352 63.158 0.00 0.00 0.00 3.69
296 297 1.219393 GACTTCTTCCCCGCCTCTG 59.781 63.158 0.00 0.00 0.00 3.35
297 298 2.245438 GACTTCTTCCCCGCCTCTGG 62.245 65.000 0.00 0.00 0.00 3.86
298 299 3.689002 CTTCTTCCCCGCCTCTGGC 62.689 68.421 0.00 0.00 46.75 4.85
320 321 3.284449 GGCGTTGCCTTCCACGTT 61.284 61.111 0.00 0.00 46.69 3.99
321 322 2.051345 GCGTTGCCTTCCACGTTG 60.051 61.111 0.00 0.00 0.00 4.10
322 323 2.637025 CGTTGCCTTCCACGTTGG 59.363 61.111 0.00 0.00 39.43 3.77
323 324 2.335011 GTTGCCTTCCACGTTGGC 59.665 61.111 10.56 10.56 46.26 4.52
324 325 2.193536 GTTGCCTTCCACGTTGGCT 61.194 57.895 16.21 0.00 46.23 4.75
325 326 1.454847 TTGCCTTCCACGTTGGCTT 60.455 52.632 16.21 0.00 46.23 4.35
326 327 1.040339 TTGCCTTCCACGTTGGCTTT 61.040 50.000 16.21 0.00 46.23 3.51
327 328 1.285950 GCCTTCCACGTTGGCTTTC 59.714 57.895 10.29 0.00 43.05 2.62
328 329 1.956802 CCTTCCACGTTGGCTTTCC 59.043 57.895 0.00 0.00 37.47 3.13
329 330 1.524008 CCTTCCACGTTGGCTTTCCC 61.524 60.000 0.00 0.00 37.47 3.97
330 331 1.852067 CTTCCACGTTGGCTTTCCCG 61.852 60.000 0.00 0.00 37.47 5.14
331 332 2.593436 CCACGTTGGCTTTCCCGT 60.593 61.111 0.00 0.00 35.87 5.28
332 333 2.637025 CACGTTGGCTTTCCCGTG 59.363 61.111 0.00 0.00 40.05 4.94
333 334 1.890041 CACGTTGGCTTTCCCGTGA 60.890 57.895 5.17 0.00 45.06 4.35
334 335 1.153127 ACGTTGGCTTTCCCGTGAA 60.153 52.632 0.00 0.00 35.87 3.18
335 336 0.748729 ACGTTGGCTTTCCCGTGAAA 60.749 50.000 0.00 0.00 38.14 2.69
336 337 0.382515 CGTTGGCTTTCCCGTGAAAA 59.617 50.000 0.00 0.00 39.88 2.29
337 338 1.847818 GTTGGCTTTCCCGTGAAAAC 58.152 50.000 0.00 0.00 39.88 2.43
338 339 1.135333 GTTGGCTTTCCCGTGAAAACA 59.865 47.619 0.00 0.00 39.88 2.83
339 340 1.698506 TGGCTTTCCCGTGAAAACAT 58.301 45.000 0.00 0.00 39.88 2.71
340 341 2.035632 TGGCTTTCCCGTGAAAACATT 58.964 42.857 0.00 0.00 39.88 2.71
341 342 2.223923 TGGCTTTCCCGTGAAAACATTG 60.224 45.455 0.00 0.00 39.88 2.82
342 343 2.035321 GGCTTTCCCGTGAAAACATTGA 59.965 45.455 0.00 0.00 39.88 2.57
343 344 3.306019 GGCTTTCCCGTGAAAACATTGAT 60.306 43.478 0.00 0.00 39.88 2.57
344 345 3.674753 GCTTTCCCGTGAAAACATTGATG 59.325 43.478 0.00 0.00 39.88 3.07
345 346 3.932545 TTCCCGTGAAAACATTGATGG 57.067 42.857 0.00 0.00 0.00 3.51
346 347 2.166829 TCCCGTGAAAACATTGATGGG 58.833 47.619 0.00 0.00 36.14 4.00
347 348 2.166829 CCCGTGAAAACATTGATGGGA 58.833 47.619 0.00 0.00 36.85 4.37
348 349 2.560542 CCCGTGAAAACATTGATGGGAA 59.439 45.455 0.00 0.00 36.85 3.97
349 350 3.195396 CCCGTGAAAACATTGATGGGAAT 59.805 43.478 0.00 0.00 36.85 3.01
350 351 4.175516 CCGTGAAAACATTGATGGGAATG 58.824 43.478 0.00 0.00 38.97 2.67
351 352 4.321899 CCGTGAAAACATTGATGGGAATGT 60.322 41.667 0.00 0.00 46.35 2.71
352 353 4.858692 CGTGAAAACATTGATGGGAATGTC 59.141 41.667 0.00 0.00 44.15 3.06
353 354 5.170748 GTGAAAACATTGATGGGAATGTCC 58.829 41.667 0.00 0.00 44.15 4.02
354 355 4.837298 TGAAAACATTGATGGGAATGTCCA 59.163 37.500 0.00 0.00 44.15 4.02
355 356 5.306419 TGAAAACATTGATGGGAATGTCCAA 59.694 36.000 0.00 0.00 44.15 3.53
356 357 5.822132 AAACATTGATGGGAATGTCCAAA 57.178 34.783 0.00 0.00 44.15 3.28
357 358 6.377245 AAACATTGATGGGAATGTCCAAAT 57.623 33.333 0.00 0.00 44.15 2.32
358 359 5.347620 ACATTGATGGGAATGTCCAAATG 57.652 39.130 0.00 0.00 41.75 2.32
359 360 3.891422 TTGATGGGAATGTCCAAATGC 57.109 42.857 0.00 0.00 40.62 3.56
360 361 1.750206 TGATGGGAATGTCCAAATGCG 59.250 47.619 0.00 0.00 40.62 4.73
361 362 1.750778 GATGGGAATGTCCAAATGCGT 59.249 47.619 0.00 0.00 40.62 5.24
362 363 0.887247 TGGGAATGTCCAAATGCGTG 59.113 50.000 0.00 0.00 38.64 5.34
363 364 1.173043 GGGAATGTCCAAATGCGTGA 58.827 50.000 0.00 0.00 38.64 4.35
364 365 1.133025 GGGAATGTCCAAATGCGTGAG 59.867 52.381 0.00 0.00 38.64 3.51
376 377 3.201494 CGTGAGCTCGGATGGAGT 58.799 61.111 9.64 0.00 45.03 3.85
377 378 1.513158 CGTGAGCTCGGATGGAGTT 59.487 57.895 9.64 0.00 45.03 3.01
378 379 0.108615 CGTGAGCTCGGATGGAGTTT 60.109 55.000 9.64 0.00 45.03 2.66
379 380 1.673033 CGTGAGCTCGGATGGAGTTTT 60.673 52.381 9.64 0.00 45.03 2.43
380 381 2.427506 GTGAGCTCGGATGGAGTTTTT 58.572 47.619 9.64 0.00 45.03 1.94
381 382 2.160417 GTGAGCTCGGATGGAGTTTTTG 59.840 50.000 9.64 0.00 45.03 2.44
382 383 2.038426 TGAGCTCGGATGGAGTTTTTGA 59.962 45.455 9.64 0.00 45.03 2.69
383 384 2.675348 GAGCTCGGATGGAGTTTTTGAG 59.325 50.000 0.00 0.00 45.03 3.02
384 385 2.039084 AGCTCGGATGGAGTTTTTGAGT 59.961 45.455 0.00 0.00 45.03 3.41
385 386 2.814336 GCTCGGATGGAGTTTTTGAGTT 59.186 45.455 0.00 0.00 45.03 3.01
386 387 3.253432 GCTCGGATGGAGTTTTTGAGTTT 59.747 43.478 0.00 0.00 45.03 2.66
387 388 4.261614 GCTCGGATGGAGTTTTTGAGTTTT 60.262 41.667 0.00 0.00 45.03 2.43
388 389 5.736207 GCTCGGATGGAGTTTTTGAGTTTTT 60.736 40.000 0.00 0.00 45.03 1.94
422 423 4.247380 CTCCCCGGCCTCTGCATC 62.247 72.222 0.00 0.00 40.13 3.91
424 425 4.559063 CCCCGGCCTCTGCATCAG 62.559 72.222 0.00 0.00 40.13 2.90
425 426 3.473647 CCCGGCCTCTGCATCAGA 61.474 66.667 0.00 0.00 38.25 3.27
426 427 2.586245 CCGGCCTCTGCATCAGAA 59.414 61.111 0.00 0.00 40.18 3.02
427 428 1.147824 CCGGCCTCTGCATCAGAAT 59.852 57.895 0.00 0.00 40.18 2.40
428 429 1.164662 CCGGCCTCTGCATCAGAATG 61.165 60.000 0.00 0.00 40.18 2.67
429 430 1.164662 CGGCCTCTGCATCAGAATGG 61.165 60.000 0.00 0.00 40.18 3.16
430 431 0.106819 GGCCTCTGCATCAGAATGGT 60.107 55.000 0.00 0.00 40.18 3.55
439 440 3.867055 CATCAGAATGGTGCATACGAC 57.133 47.619 0.00 0.00 42.26 4.34
440 441 2.309528 TCAGAATGGTGCATACGACC 57.690 50.000 0.00 0.00 36.16 4.79
441 442 1.831106 TCAGAATGGTGCATACGACCT 59.169 47.619 0.00 0.00 36.16 3.85
442 443 2.159099 TCAGAATGGTGCATACGACCTC 60.159 50.000 0.00 0.00 36.16 3.85
443 444 2.111384 AGAATGGTGCATACGACCTCT 58.889 47.619 0.00 0.00 34.26 3.69
450 451 1.725557 GCATACGACCTCTGCTCGGA 61.726 60.000 0.00 0.00 35.37 4.55
462 463 2.038426 TCTGCTCGGATGGAGTTTTTGA 59.962 45.455 0.00 0.00 45.03 2.69
478 479 0.478072 TTGAGTGGACTGGGCATGTT 59.522 50.000 0.00 0.00 0.00 2.71
494 495 3.228017 TTGGAGTCCGACGTGGCA 61.228 61.111 4.30 0.00 37.80 4.92
505 506 2.126071 CGTGGCAGTCGTCCGAAT 60.126 61.111 0.00 0.00 0.00 3.34
518 519 2.635443 CCGAATGCCCGCAAACCTT 61.635 57.895 0.00 0.00 0.00 3.50
519 520 1.288752 CGAATGCCCGCAAACCTTT 59.711 52.632 0.00 0.00 0.00 3.11
549 551 6.039270 TGTTTGACTCCGATTTGTGAGATTTT 59.961 34.615 0.00 0.00 32.84 1.82
552 554 4.398319 ACTCCGATTTGTGAGATTTTGGT 58.602 39.130 0.00 0.00 32.84 3.67
579 581 4.531659 GGATCGGTCCGAACAAATTTAG 57.468 45.455 19.76 0.00 39.99 1.85
594 596 7.164230 ACAAATTTAGTGAGTGTTGTTGGAA 57.836 32.000 0.00 0.00 0.00 3.53
597 599 4.764050 TTAGTGAGTGTTGTTGGAAGGA 57.236 40.909 0.00 0.00 0.00 3.36
627 638 4.900635 ATGAGATCCAAACATTTACGGC 57.099 40.909 0.00 0.00 0.00 5.68
628 639 2.675844 TGAGATCCAAACATTTACGGCG 59.324 45.455 4.80 4.80 0.00 6.46
633 644 3.827625 TCCAAACATTTACGGCGATTTG 58.172 40.909 16.62 13.04 0.00 2.32
634 645 3.502595 TCCAAACATTTACGGCGATTTGA 59.497 39.130 16.62 0.00 30.35 2.69
635 646 4.156922 TCCAAACATTTACGGCGATTTGAT 59.843 37.500 16.62 0.00 30.35 2.57
636 647 4.265085 CCAAACATTTACGGCGATTTGATG 59.735 41.667 16.62 12.28 30.35 3.07
637 648 4.955925 AACATTTACGGCGATTTGATGA 57.044 36.364 16.62 0.00 0.00 2.92
638 649 5.499139 AACATTTACGGCGATTTGATGAT 57.501 34.783 16.62 2.38 0.00 2.45
648 661 4.285292 GCGATTTGATGATCATGTTGGAC 58.715 43.478 14.30 0.00 0.00 4.02
727 741 1.376683 CGGTTGGGCGAAGGAATCA 60.377 57.895 0.00 0.00 0.00 2.57
728 742 1.369091 CGGTTGGGCGAAGGAATCAG 61.369 60.000 0.00 0.00 0.00 2.90
736 754 1.140407 CGAAGGAATCAGCGGTCGAC 61.140 60.000 7.13 7.13 0.00 4.20
1091 1166 1.238439 CGCAAAGGAAGGAAGCAGAA 58.762 50.000 0.00 0.00 0.00 3.02
2023 2157 2.579787 CGACGCCGATCACTGTCC 60.580 66.667 0.00 0.00 38.22 4.02
2037 2171 1.269413 ACTGTCCGACTTACAACACGG 60.269 52.381 0.00 0.00 45.61 4.94
2055 2190 1.031571 GGGCAGCATCGTGATTTGGA 61.032 55.000 0.00 0.00 0.00 3.53
2064 2199 0.721718 CGTGATTTGGAAGACCTCGC 59.278 55.000 0.00 0.00 37.04 5.03
2281 2454 0.179032 AATGGCATATCAACGGGCGA 60.179 50.000 0.00 0.00 0.00 5.54
2282 2455 0.036732 ATGGCATATCAACGGGCGAT 59.963 50.000 0.00 0.00 0.00 4.58
2355 2531 1.067776 GTACGAGTAGCAAGCTGTGGT 60.068 52.381 4.53 2.39 41.93 4.16
2386 2562 4.063689 GGGTGAGAGTGATGATAATGCTG 58.936 47.826 0.00 0.00 0.00 4.41
2426 2602 1.066454 GGGTGTGTTTGGTTCGGAAAG 59.934 52.381 0.00 0.00 0.00 2.62
2432 2608 3.878699 GTGTTTGGTTCGGAAAGGAACTA 59.121 43.478 5.54 0.00 44.45 2.24
2472 2649 3.631250 AGGTGTTGGTTCTGTTGACATT 58.369 40.909 0.00 0.00 0.00 2.71
2476 3087 5.063312 GGTGTTGGTTCTGTTGACATTTTTG 59.937 40.000 0.00 0.00 0.00 2.44
2678 4466 9.744468 AAGCAAACAAATAATTAAAGTCGTCTT 57.256 25.926 0.00 0.00 35.14 3.01
2708 4496 7.283127 GGTTAATGCTCATTTCTTCCTCATACA 59.717 37.037 0.00 0.00 32.50 2.29
2724 4512 3.069016 TCATACATCAAGGCGTATTCGGT 59.931 43.478 0.00 0.00 37.56 4.69
2727 4515 2.276201 CATCAAGGCGTATTCGGTCAA 58.724 47.619 0.00 0.00 37.56 3.18
2743 4532 4.572571 AACAAACGGGCGCCCAGA 62.573 61.111 42.78 0.00 35.37 3.86
2874 4670 0.179097 CCCAACACAAAAACCCCACG 60.179 55.000 0.00 0.00 0.00 4.94
2916 4717 2.678934 TGTCGACCCTCCCCTTCG 60.679 66.667 14.12 0.00 0.00 3.79
2975 6229 4.904853 TGGAGCCTTTTCCTTTAAAACCAT 59.095 37.500 0.00 0.00 38.12 3.55
2986 6240 4.340950 CCTTTAAAACCATATGACGCCCAT 59.659 41.667 3.65 0.00 39.25 4.00
3155 6421 2.029918 CACTGACATGGAAGACGAGTGA 60.030 50.000 0.00 0.00 32.78 3.41
3158 6424 2.562738 TGACATGGAAGACGAGTGACAT 59.437 45.455 0.00 0.00 0.00 3.06
3182 6448 3.305720 TGAACGTATTCCTAGCCTCCAT 58.694 45.455 0.00 0.00 33.49 3.41
3198 6464 2.441001 CTCCATTAAGCTCCACCTCCAT 59.559 50.000 0.00 0.00 0.00 3.41
3199 6465 2.852449 TCCATTAAGCTCCACCTCCATT 59.148 45.455 0.00 0.00 0.00 3.16
3269 6543 4.038162 CCCGTTCTTCCCTACATCTTCTAG 59.962 50.000 0.00 0.00 0.00 2.43
3288 6562 5.219739 TCTAGTCCTAGCCAATTCAAGGAT 58.780 41.667 0.00 0.00 40.17 3.24
3437 6715 2.296792 TGTGTTCATTGTCACACCCAG 58.703 47.619 14.99 0.00 42.33 4.45
3528 6826 8.364129 AGCACCAAATGTTACACTTAATTTTG 57.636 30.769 0.00 0.00 0.00 2.44
3559 6857 3.052642 ACCAATGAACCATTGCTATCCCT 60.053 43.478 12.73 0.00 46.73 4.20
3564 6862 4.728772 TGAACCATTGCTATCCCTTATGG 58.271 43.478 0.00 0.00 41.18 2.74
3584 6882 3.181468 TGGCATGAAAATTGTCAAGCACA 60.181 39.130 23.38 16.69 42.58 4.57
3585 6883 3.184986 GGCATGAAAATTGTCAAGCACAC 59.815 43.478 23.38 6.52 42.58 3.82
3586 6884 4.053295 GCATGAAAATTGTCAAGCACACT 58.947 39.130 18.63 0.00 40.93 3.55
3600 6898 4.920640 AGCACACTACTTGATACGCTAT 57.079 40.909 0.00 0.00 0.00 2.97
3652 6950 6.147164 CGTTTCACTTGTGTCATGTATAACCT 59.853 38.462 0.46 0.00 0.00 3.50
3678 6976 7.784790 TTTTCTCGCGAAAAATACCAAATAC 57.215 32.000 11.33 0.00 43.93 1.89
3679 6977 6.483385 TTCTCGCGAAAAATACCAAATACA 57.517 33.333 11.33 0.00 0.00 2.29
3680 6978 5.860641 TCTCGCGAAAAATACCAAATACAC 58.139 37.500 11.33 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 0.249031 TGCATACTGTGGATCGCTCG 60.249 55.000 0.00 0.00 0.00 5.03
2 3 1.797046 CATGCATACTGTGGATCGCTC 59.203 52.381 0.00 0.00 36.66 5.03
3 4 1.139654 ACATGCATACTGTGGATCGCT 59.860 47.619 0.00 0.00 36.66 4.93
4 5 1.262417 CACATGCATACTGTGGATCGC 59.738 52.381 10.48 0.00 40.23 4.58
5 6 1.262417 GCACATGCATACTGTGGATCG 59.738 52.381 18.08 0.00 43.34 3.69
6 7 1.262417 CGCACATGCATACTGTGGATC 59.738 52.381 18.08 3.72 43.34 3.36
7 8 1.134431 TCGCACATGCATACTGTGGAT 60.134 47.619 18.08 0.00 43.34 3.41
8 9 0.248843 TCGCACATGCATACTGTGGA 59.751 50.000 18.08 11.69 43.34 4.02
9 10 0.374758 GTCGCACATGCATACTGTGG 59.625 55.000 18.08 9.93 43.34 4.17
10 11 0.374758 GGTCGCACATGCATACTGTG 59.625 55.000 13.43 13.43 45.39 3.66
11 12 1.083806 CGGTCGCACATGCATACTGT 61.084 55.000 0.00 0.00 42.21 3.55
12 13 1.637934 CGGTCGCACATGCATACTG 59.362 57.895 0.00 0.00 42.21 2.74
13 14 1.521457 CCGGTCGCACATGCATACT 60.521 57.895 0.00 0.00 42.21 2.12
14 15 1.520564 TCCGGTCGCACATGCATAC 60.521 57.895 0.00 1.43 42.21 2.39
15 16 1.520564 GTCCGGTCGCACATGCATA 60.521 57.895 0.00 0.00 42.21 3.14
16 17 2.819595 GTCCGGTCGCACATGCAT 60.820 61.111 0.00 0.00 42.21 3.96
17 18 3.816367 TTGTCCGGTCGCACATGCA 62.816 57.895 0.00 0.00 42.21 3.96
18 19 2.612567 TTTGTCCGGTCGCACATGC 61.613 57.895 0.00 0.00 37.78 4.06
19 20 1.206578 GTTTGTCCGGTCGCACATG 59.793 57.895 0.00 0.00 0.00 3.21
20 21 1.964373 GGTTTGTCCGGTCGCACAT 60.964 57.895 0.00 0.00 0.00 3.21
21 22 2.589442 GGTTTGTCCGGTCGCACA 60.589 61.111 0.00 0.00 0.00 4.57
22 23 3.351416 GGGTTTGTCCGGTCGCAC 61.351 66.667 0.00 0.00 37.00 5.34
23 24 4.629523 GGGGTTTGTCCGGTCGCA 62.630 66.667 0.00 0.00 37.00 5.10
28 29 4.958897 TTGGCGGGGTTTGTCCGG 62.959 66.667 0.00 0.00 46.86 5.14
30 31 1.291906 CAATTGGCGGGGTTTGTCC 59.708 57.895 0.00 0.00 0.00 4.02
31 32 1.374125 GCAATTGGCGGGGTTTGTC 60.374 57.895 7.72 0.00 0.00 3.18
32 33 2.740438 GCAATTGGCGGGGTTTGT 59.260 55.556 7.72 0.00 0.00 2.83
41 42 3.391965 TCTTCATGTTGTTGCAATTGGC 58.608 40.909 0.59 0.15 45.13 4.52
42 43 5.987777 TTTCTTCATGTTGTTGCAATTGG 57.012 34.783 0.59 0.00 0.00 3.16
43 44 9.749490 GATTATTTCTTCATGTTGTTGCAATTG 57.251 29.630 0.59 0.00 0.00 2.32
44 45 8.649841 CGATTATTTCTTCATGTTGTTGCAATT 58.350 29.630 0.59 0.00 0.00 2.32
45 46 7.276218 CCGATTATTTCTTCATGTTGTTGCAAT 59.724 33.333 0.59 0.00 0.00 3.56
46 47 6.585702 CCGATTATTTCTTCATGTTGTTGCAA 59.414 34.615 0.00 0.00 0.00 4.08
47 48 6.092092 CCGATTATTTCTTCATGTTGTTGCA 58.908 36.000 0.00 0.00 0.00 4.08
48 49 6.033831 CACCGATTATTTCTTCATGTTGTTGC 59.966 38.462 0.00 0.00 0.00 4.17
49 50 7.083858 ACACCGATTATTTCTTCATGTTGTTG 58.916 34.615 0.00 0.00 0.00 3.33
50 51 7.214467 ACACCGATTATTTCTTCATGTTGTT 57.786 32.000 0.00 0.00 0.00 2.83
51 52 6.817765 ACACCGATTATTTCTTCATGTTGT 57.182 33.333 0.00 0.00 0.00 3.32
52 53 7.304735 TCAACACCGATTATTTCTTCATGTTG 58.695 34.615 6.89 6.89 43.53 3.33
53 54 7.362056 CCTCAACACCGATTATTTCTTCATGTT 60.362 37.037 0.00 0.00 0.00 2.71
54 55 6.094048 CCTCAACACCGATTATTTCTTCATGT 59.906 38.462 0.00 0.00 0.00 3.21
55 56 6.094048 ACCTCAACACCGATTATTTCTTCATG 59.906 38.462 0.00 0.00 0.00 3.07
56 57 6.180472 ACCTCAACACCGATTATTTCTTCAT 58.820 36.000 0.00 0.00 0.00 2.57
57 58 5.556915 ACCTCAACACCGATTATTTCTTCA 58.443 37.500 0.00 0.00 0.00 3.02
58 59 5.642063 TGACCTCAACACCGATTATTTCTTC 59.358 40.000 0.00 0.00 0.00 2.87
59 60 5.556915 TGACCTCAACACCGATTATTTCTT 58.443 37.500 0.00 0.00 0.00 2.52
60 61 5.160607 TGACCTCAACACCGATTATTTCT 57.839 39.130 0.00 0.00 0.00 2.52
61 62 5.873179 TTGACCTCAACACCGATTATTTC 57.127 39.130 0.00 0.00 0.00 2.17
74 75 0.531090 CCGTTCACCGTTGACCTCAA 60.531 55.000 0.00 0.00 33.66 3.02
75 76 1.068417 CCGTTCACCGTTGACCTCA 59.932 57.895 0.00 0.00 33.66 3.86
76 77 1.666872 CCCGTTCACCGTTGACCTC 60.667 63.158 0.00 0.00 33.66 3.85
77 78 2.135581 TCCCGTTCACCGTTGACCT 61.136 57.895 0.00 0.00 33.66 3.85
78 79 1.957695 GTCCCGTTCACCGTTGACC 60.958 63.158 0.00 0.00 33.02 4.02
79 80 0.942884 GAGTCCCGTTCACCGTTGAC 60.943 60.000 0.00 0.00 36.95 3.18
80 81 1.364901 GAGTCCCGTTCACCGTTGA 59.635 57.895 0.00 0.00 33.66 3.18
81 82 2.019951 CGAGTCCCGTTCACCGTTG 61.020 63.158 0.00 0.00 33.66 4.10
82 83 1.530013 ATCGAGTCCCGTTCACCGTT 61.530 55.000 0.00 0.00 39.75 4.44
83 84 1.975407 ATCGAGTCCCGTTCACCGT 60.975 57.895 0.00 0.00 39.75 4.83
84 85 1.516386 CATCGAGTCCCGTTCACCG 60.516 63.158 0.00 0.00 39.75 4.94
85 86 1.153628 CCATCGAGTCCCGTTCACC 60.154 63.158 0.00 0.00 39.75 4.02
86 87 1.810030 GCCATCGAGTCCCGTTCAC 60.810 63.158 0.00 0.00 39.75 3.18
87 88 1.541310 AAGCCATCGAGTCCCGTTCA 61.541 55.000 0.00 0.00 39.75 3.18
88 89 1.084370 CAAGCCATCGAGTCCCGTTC 61.084 60.000 0.00 0.00 39.75 3.95
89 90 1.079127 CAAGCCATCGAGTCCCGTT 60.079 57.895 0.00 0.00 39.75 4.44
90 91 1.949847 CTCAAGCCATCGAGTCCCGT 61.950 60.000 0.00 0.00 39.75 5.28
91 92 1.227089 CTCAAGCCATCGAGTCCCG 60.227 63.158 0.00 0.00 40.25 5.14
92 93 1.144936 CCTCAAGCCATCGAGTCCC 59.855 63.158 0.00 0.00 0.00 4.46
93 94 0.460987 CACCTCAAGCCATCGAGTCC 60.461 60.000 0.00 0.00 0.00 3.85
94 95 0.532573 TCACCTCAAGCCATCGAGTC 59.467 55.000 0.00 0.00 0.00 3.36
95 96 0.976641 TTCACCTCAAGCCATCGAGT 59.023 50.000 0.00 0.00 0.00 4.18
96 97 1.649664 CTTCACCTCAAGCCATCGAG 58.350 55.000 0.00 0.00 0.00 4.04
97 98 0.250234 CCTTCACCTCAAGCCATCGA 59.750 55.000 0.00 0.00 0.00 3.59
98 99 0.250234 TCCTTCACCTCAAGCCATCG 59.750 55.000 0.00 0.00 0.00 3.84
99 100 1.280421 ACTCCTTCACCTCAAGCCATC 59.720 52.381 0.00 0.00 0.00 3.51
100 101 1.366319 ACTCCTTCACCTCAAGCCAT 58.634 50.000 0.00 0.00 0.00 4.40
101 102 1.623811 GTACTCCTTCACCTCAAGCCA 59.376 52.381 0.00 0.00 0.00 4.75
102 103 1.404315 CGTACTCCTTCACCTCAAGCC 60.404 57.143 0.00 0.00 0.00 4.35
103 104 1.272769 ACGTACTCCTTCACCTCAAGC 59.727 52.381 0.00 0.00 0.00 4.01
104 105 4.008330 TCTACGTACTCCTTCACCTCAAG 58.992 47.826 0.00 0.00 0.00 3.02
105 106 3.755378 GTCTACGTACTCCTTCACCTCAA 59.245 47.826 0.00 0.00 0.00 3.02
106 107 3.008813 AGTCTACGTACTCCTTCACCTCA 59.991 47.826 0.00 0.00 0.00 3.86
107 108 3.608796 AGTCTACGTACTCCTTCACCTC 58.391 50.000 0.00 0.00 0.00 3.85
108 109 3.717452 AGTCTACGTACTCCTTCACCT 57.283 47.619 0.00 0.00 0.00 4.00
109 110 3.308323 CGTAGTCTACGTACTCCTTCACC 59.692 52.174 21.77 0.00 46.41 4.02
110 111 4.513000 CGTAGTCTACGTACTCCTTCAC 57.487 50.000 21.77 0.00 46.41 3.18
122 123 0.933509 CAATCGCCGCCGTAGTCTAC 60.934 60.000 0.00 0.00 35.54 2.59
123 124 1.357690 CAATCGCCGCCGTAGTCTA 59.642 57.895 0.00 0.00 35.54 2.59
124 125 2.104331 CAATCGCCGCCGTAGTCT 59.896 61.111 0.00 0.00 35.54 3.24
125 126 1.808390 AACAATCGCCGCCGTAGTC 60.808 57.895 0.00 0.00 35.54 2.59
126 127 2.098233 CAACAATCGCCGCCGTAGT 61.098 57.895 0.00 0.00 35.54 2.73
127 128 2.701006 CAACAATCGCCGCCGTAG 59.299 61.111 0.00 0.00 35.54 3.51
128 129 3.492545 GCAACAATCGCCGCCGTA 61.493 61.111 0.00 0.00 35.54 4.02
131 132 3.492545 TACGCAACAATCGCCGCC 61.493 61.111 0.00 0.00 0.00 6.13
132 133 2.276430 GTACGCAACAATCGCCGC 60.276 61.111 0.00 0.00 0.00 6.53
133 134 1.902716 TTGGTACGCAACAATCGCCG 61.903 55.000 0.00 0.00 0.00 6.46
134 135 0.238817 TTTGGTACGCAACAATCGCC 59.761 50.000 0.00 0.00 0.00 5.54
135 136 1.069500 ACTTTGGTACGCAACAATCGC 60.069 47.619 0.00 0.00 0.00 4.58
136 137 2.032377 ACACTTTGGTACGCAACAATCG 60.032 45.455 0.00 0.00 0.00 3.34
137 138 3.619233 ACACTTTGGTACGCAACAATC 57.381 42.857 0.00 0.00 0.00 2.67
138 139 3.490078 CCAACACTTTGGTACGCAACAAT 60.490 43.478 0.00 0.00 46.63 2.71
139 140 2.159366 CCAACACTTTGGTACGCAACAA 60.159 45.455 0.00 0.00 46.63 2.83
140 141 1.402259 CCAACACTTTGGTACGCAACA 59.598 47.619 0.00 0.00 46.63 3.33
141 142 2.113910 CCAACACTTTGGTACGCAAC 57.886 50.000 0.00 0.00 46.63 4.17
150 151 1.841663 CGACGCCTCCCAACACTTTG 61.842 60.000 0.00 0.00 0.00 2.77
151 152 1.597027 CGACGCCTCCCAACACTTT 60.597 57.895 0.00 0.00 0.00 2.66
152 153 1.466025 TACGACGCCTCCCAACACTT 61.466 55.000 0.00 0.00 0.00 3.16
153 154 1.874345 CTACGACGCCTCCCAACACT 61.874 60.000 0.00 0.00 0.00 3.55
154 155 1.445582 CTACGACGCCTCCCAACAC 60.446 63.158 0.00 0.00 0.00 3.32
155 156 0.608856 TACTACGACGCCTCCCAACA 60.609 55.000 0.00 0.00 0.00 3.33
156 157 0.100146 CTACTACGACGCCTCCCAAC 59.900 60.000 0.00 0.00 0.00 3.77
157 158 1.033746 CCTACTACGACGCCTCCCAA 61.034 60.000 0.00 0.00 0.00 4.12
158 159 1.452651 CCTACTACGACGCCTCCCA 60.453 63.158 0.00 0.00 0.00 4.37
159 160 2.192187 CCCTACTACGACGCCTCCC 61.192 68.421 0.00 0.00 0.00 4.30
160 161 1.452833 ACCCTACTACGACGCCTCC 60.453 63.158 0.00 0.00 0.00 4.30
161 162 1.722636 CCACCCTACTACGACGCCTC 61.723 65.000 0.00 0.00 0.00 4.70
162 163 1.751927 CCACCCTACTACGACGCCT 60.752 63.158 0.00 0.00 0.00 5.52
163 164 2.803479 CCACCCTACTACGACGCC 59.197 66.667 0.00 0.00 0.00 5.68
164 165 1.941999 AAGCCACCCTACTACGACGC 61.942 60.000 0.00 0.00 0.00 5.19
165 166 0.529378 AAAGCCACCCTACTACGACG 59.471 55.000 0.00 0.00 0.00 5.12
166 167 2.480932 GCTAAAGCCACCCTACTACGAC 60.481 54.545 0.00 0.00 34.31 4.34
167 168 1.753073 GCTAAAGCCACCCTACTACGA 59.247 52.381 0.00 0.00 34.31 3.43
168 169 1.755380 AGCTAAAGCCACCCTACTACG 59.245 52.381 0.00 0.00 43.38 3.51
169 170 3.321396 CCTAGCTAAAGCCACCCTACTAC 59.679 52.174 0.00 0.00 43.38 2.73
170 171 3.205959 TCCTAGCTAAAGCCACCCTACTA 59.794 47.826 0.00 0.00 43.38 1.82
171 172 2.023307 TCCTAGCTAAAGCCACCCTACT 60.023 50.000 0.00 0.00 43.38 2.57
172 173 2.102757 GTCCTAGCTAAAGCCACCCTAC 59.897 54.545 0.00 0.00 43.38 3.18
173 174 2.395619 GTCCTAGCTAAAGCCACCCTA 58.604 52.381 0.00 0.00 43.38 3.53
174 175 1.205055 GTCCTAGCTAAAGCCACCCT 58.795 55.000 0.00 0.00 43.38 4.34
175 176 0.179081 CGTCCTAGCTAAAGCCACCC 60.179 60.000 0.00 0.00 43.38 4.61
176 177 0.822164 TCGTCCTAGCTAAAGCCACC 59.178 55.000 0.00 0.00 43.38 4.61
177 178 1.471153 GGTCGTCCTAGCTAAAGCCAC 60.471 57.143 0.00 0.00 43.38 5.01
178 179 0.822164 GGTCGTCCTAGCTAAAGCCA 59.178 55.000 0.00 0.00 43.38 4.75
179 180 0.104487 GGGTCGTCCTAGCTAAAGCC 59.896 60.000 0.00 0.00 43.38 4.35
180 181 1.112950 AGGGTCGTCCTAGCTAAAGC 58.887 55.000 0.00 0.00 45.98 3.51
190 191 2.750888 GCGCAATCAAGGGTCGTCC 61.751 63.158 0.30 0.00 0.00 4.79
191 192 1.970917 CTGCGCAATCAAGGGTCGTC 61.971 60.000 13.05 0.00 0.00 4.20
192 193 2.031919 TGCGCAATCAAGGGTCGT 59.968 55.556 8.16 0.00 0.00 4.34
193 194 2.753966 CCTGCGCAATCAAGGGTCG 61.754 63.158 13.05 0.00 0.00 4.79
194 195 3.056313 GCCTGCGCAATCAAGGGTC 62.056 63.158 13.05 0.70 34.03 4.46
195 196 2.196997 TAGCCTGCGCAATCAAGGGT 62.197 55.000 19.39 19.39 37.52 4.34
196 197 1.451927 TAGCCTGCGCAATCAAGGG 60.452 57.895 13.05 9.42 37.52 3.95
197 198 1.026182 TGTAGCCTGCGCAATCAAGG 61.026 55.000 13.05 10.27 37.52 3.61
198 199 0.097674 GTGTAGCCTGCGCAATCAAG 59.902 55.000 13.05 0.00 37.52 3.02
199 200 1.305219 GGTGTAGCCTGCGCAATCAA 61.305 55.000 13.05 0.00 37.52 2.57
200 201 1.745115 GGTGTAGCCTGCGCAATCA 60.745 57.895 13.05 3.52 37.52 2.57
201 202 1.305219 TTGGTGTAGCCTGCGCAATC 61.305 55.000 13.05 5.93 38.35 2.67
202 203 1.303236 TTGGTGTAGCCTGCGCAAT 60.303 52.632 13.05 2.69 38.35 3.56
203 204 1.965930 CTTGGTGTAGCCTGCGCAA 60.966 57.895 13.05 0.00 38.35 4.85
204 205 2.358615 CTTGGTGTAGCCTGCGCA 60.359 61.111 10.98 10.98 38.35 6.09
205 206 1.639298 CTTCTTGGTGTAGCCTGCGC 61.639 60.000 0.00 0.00 38.35 6.09
206 207 0.037326 TCTTCTTGGTGTAGCCTGCG 60.037 55.000 0.00 0.00 38.35 5.18
207 208 2.012673 CATCTTCTTGGTGTAGCCTGC 58.987 52.381 0.00 0.00 38.35 4.85
208 209 3.265791 GTCATCTTCTTGGTGTAGCCTG 58.734 50.000 0.00 0.00 38.35 4.85
209 210 2.906389 TGTCATCTTCTTGGTGTAGCCT 59.094 45.455 0.00 0.00 38.35 4.58
210 211 3.334583 TGTCATCTTCTTGGTGTAGCC 57.665 47.619 0.00 0.00 37.90 3.93
211 212 3.126000 GCTTGTCATCTTCTTGGTGTAGC 59.874 47.826 0.00 0.00 0.00 3.58
212 213 4.391216 CAGCTTGTCATCTTCTTGGTGTAG 59.609 45.833 0.00 0.00 0.00 2.74
213 214 4.202357 ACAGCTTGTCATCTTCTTGGTGTA 60.202 41.667 0.00 0.00 33.78 2.90
214 215 3.144506 CAGCTTGTCATCTTCTTGGTGT 58.855 45.455 0.00 0.00 0.00 4.16
215 216 3.058432 CACAGCTTGTCATCTTCTTGGTG 60.058 47.826 0.00 0.00 0.00 4.17
216 217 3.144506 CACAGCTTGTCATCTTCTTGGT 58.855 45.455 0.00 0.00 0.00 3.67
217 218 3.144506 ACACAGCTTGTCATCTTCTTGG 58.855 45.455 0.00 0.00 29.79 3.61
228 229 1.007271 CTCGTCCGACACAGCTTGT 60.007 57.895 0.00 1.82 43.10 3.16
229 230 1.734477 CCTCGTCCGACACAGCTTG 60.734 63.158 0.00 0.00 0.00 4.01
230 231 2.143594 GACCTCGTCCGACACAGCTT 62.144 60.000 0.00 0.00 0.00 3.74
231 232 2.597805 ACCTCGTCCGACACAGCT 60.598 61.111 0.00 0.00 0.00 4.24
232 233 2.126424 GACCTCGTCCGACACAGC 60.126 66.667 0.00 0.00 0.00 4.40
233 234 2.567049 GGACCTCGTCCGACACAG 59.433 66.667 0.00 0.00 43.14 3.66
243 244 0.662085 GGCTAGTTAGACGGACCTCG 59.338 60.000 0.00 0.00 45.88 4.63
251 252 1.589196 CGCAGGCGGCTAGTTAGAC 60.589 63.158 12.74 0.00 41.67 2.59
252 253 2.805546 CGCAGGCGGCTAGTTAGA 59.194 61.111 12.74 0.00 41.67 2.10
253 254 2.962253 GCGCAGGCGGCTAGTTAG 60.962 66.667 12.74 0.00 41.67 2.34
254 255 3.765578 TGCGCAGGCGGCTAGTTA 61.766 61.111 12.74 0.00 44.10 2.24
269 270 3.119096 GAAGAAGTCGGGCGGTGC 61.119 66.667 0.00 0.00 0.00 5.01
270 271 2.434359 GGAAGAAGTCGGGCGGTG 60.434 66.667 0.00 0.00 0.00 4.94
271 272 3.703127 GGGAAGAAGTCGGGCGGT 61.703 66.667 0.00 0.00 0.00 5.68
272 273 4.468689 GGGGAAGAAGTCGGGCGG 62.469 72.222 0.00 0.00 0.00 6.13
273 274 4.814294 CGGGGAAGAAGTCGGGCG 62.814 72.222 0.00 0.00 0.00 6.13
275 276 4.468689 GGCGGGGAAGAAGTCGGG 62.469 72.222 0.00 0.00 0.00 5.14
276 277 3.372554 GAGGCGGGGAAGAAGTCGG 62.373 68.421 0.00 0.00 0.00 4.79
277 278 2.184579 GAGGCGGGGAAGAAGTCG 59.815 66.667 0.00 0.00 0.00 4.18
278 279 1.219393 CAGAGGCGGGGAAGAAGTC 59.781 63.158 0.00 0.00 0.00 3.01
279 280 2.294078 CCAGAGGCGGGGAAGAAGT 61.294 63.158 0.00 0.00 0.00 3.01
280 281 2.586792 CCAGAGGCGGGGAAGAAG 59.413 66.667 0.00 0.00 0.00 2.85
281 282 3.717294 GCCAGAGGCGGGGAAGAA 61.717 66.667 0.00 0.00 39.62 2.52
291 292 4.379243 AACGCCTGTCGCCAGAGG 62.379 66.667 0.00 0.00 41.50 3.69
292 293 3.114616 CAACGCCTGTCGCCAGAG 61.115 66.667 0.00 0.00 41.50 3.35
304 305 2.051345 CAACGTGGAAGGCAACGC 60.051 61.111 0.00 0.00 43.49 4.84
305 306 2.637025 CCAACGTGGAAGGCAACG 59.363 61.111 0.00 0.00 40.96 4.10
310 311 1.524008 GGGAAAGCCAACGTGGAAGG 61.524 60.000 8.04 0.77 40.96 3.46
311 312 1.852067 CGGGAAAGCCAACGTGGAAG 61.852 60.000 8.04 0.00 40.96 3.46
312 313 1.894756 CGGGAAAGCCAACGTGGAA 60.895 57.895 8.04 0.00 40.96 3.53
313 314 2.281208 CGGGAAAGCCAACGTGGA 60.281 61.111 8.04 0.00 40.96 4.02
314 315 2.593436 ACGGGAAAGCCAACGTGG 60.593 61.111 0.00 0.00 41.55 4.94
316 317 0.748729 TTTCACGGGAAAGCCAACGT 60.749 50.000 9.22 0.00 38.07 3.99
317 318 0.382515 TTTTCACGGGAAAGCCAACG 59.617 50.000 13.41 0.00 43.47 4.10
318 319 1.135333 TGTTTTCACGGGAAAGCCAAC 59.865 47.619 22.10 13.96 43.47 3.77
319 320 1.475403 TGTTTTCACGGGAAAGCCAA 58.525 45.000 22.10 3.87 43.47 4.52
320 321 1.698506 ATGTTTTCACGGGAAAGCCA 58.301 45.000 22.10 18.06 43.47 4.75
321 322 2.035321 TCAATGTTTTCACGGGAAAGCC 59.965 45.455 22.10 13.41 43.47 4.35
322 323 3.363341 TCAATGTTTTCACGGGAAAGC 57.637 42.857 18.89 18.89 43.47 3.51
323 324 4.236935 CCATCAATGTTTTCACGGGAAAG 58.763 43.478 13.41 1.30 43.47 2.62
324 325 3.006323 CCCATCAATGTTTTCACGGGAAA 59.994 43.478 9.22 9.22 41.13 3.13
325 326 2.560542 CCCATCAATGTTTTCACGGGAA 59.439 45.455 0.00 0.00 34.10 3.97
326 327 2.166829 CCCATCAATGTTTTCACGGGA 58.833 47.619 0.00 0.00 34.10 5.14
327 328 2.166829 TCCCATCAATGTTTTCACGGG 58.833 47.619 0.00 0.00 0.00 5.28
328 329 3.932545 TTCCCATCAATGTTTTCACGG 57.067 42.857 0.00 0.00 0.00 4.94
329 330 4.808558 ACATTCCCATCAATGTTTTCACG 58.191 39.130 0.00 0.00 43.17 4.35
330 331 5.170748 GGACATTCCCATCAATGTTTTCAC 58.829 41.667 0.59 0.00 45.23 3.18
331 332 4.837298 TGGACATTCCCATCAATGTTTTCA 59.163 37.500 0.59 0.00 45.23 2.69
332 333 5.404466 TGGACATTCCCATCAATGTTTTC 57.596 39.130 0.59 0.00 45.23 2.29
333 334 5.822132 TTGGACATTCCCATCAATGTTTT 57.178 34.783 0.59 0.00 45.23 2.43
334 335 5.822132 TTTGGACATTCCCATCAATGTTT 57.178 34.783 0.59 0.00 45.23 2.83
335 336 5.736813 CATTTGGACATTCCCATCAATGTT 58.263 37.500 0.59 0.00 45.23 2.71
337 338 4.124238 GCATTTGGACATTCCCATCAATG 58.876 43.478 0.00 0.00 37.43 2.82
338 339 3.181473 CGCATTTGGACATTCCCATCAAT 60.181 43.478 0.00 0.00 35.03 2.57
339 340 2.166050 CGCATTTGGACATTCCCATCAA 59.834 45.455 0.00 0.00 35.03 2.57
340 341 1.750206 CGCATTTGGACATTCCCATCA 59.250 47.619 0.00 0.00 35.03 3.07
341 342 1.750778 ACGCATTTGGACATTCCCATC 59.249 47.619 0.00 0.00 35.03 3.51
342 343 1.477700 CACGCATTTGGACATTCCCAT 59.522 47.619 0.00 0.00 35.03 4.00
343 344 0.887247 CACGCATTTGGACATTCCCA 59.113 50.000 0.00 0.00 35.03 4.37
344 345 1.133025 CTCACGCATTTGGACATTCCC 59.867 52.381 0.00 0.00 35.03 3.97
345 346 1.468054 GCTCACGCATTTGGACATTCC 60.468 52.381 0.00 0.00 34.71 3.01
346 347 1.470098 AGCTCACGCATTTGGACATTC 59.530 47.619 0.00 0.00 39.10 2.67
347 348 1.470098 GAGCTCACGCATTTGGACATT 59.530 47.619 9.40 0.00 39.10 2.71
348 349 1.089920 GAGCTCACGCATTTGGACAT 58.910 50.000 9.40 0.00 39.10 3.06
349 350 1.291184 CGAGCTCACGCATTTGGACA 61.291 55.000 15.40 0.00 39.10 4.02
350 351 1.421485 CGAGCTCACGCATTTGGAC 59.579 57.895 15.40 0.00 39.10 4.02
351 352 1.741401 CCGAGCTCACGCATTTGGA 60.741 57.895 15.40 0.00 39.10 3.53
352 353 1.091771 ATCCGAGCTCACGCATTTGG 61.092 55.000 15.40 4.03 39.10 3.28
353 354 0.027194 CATCCGAGCTCACGCATTTG 59.973 55.000 15.40 0.00 39.10 2.32
354 355 1.091771 CCATCCGAGCTCACGCATTT 61.092 55.000 15.40 0.00 39.10 2.32
355 356 1.522355 CCATCCGAGCTCACGCATT 60.522 57.895 15.40 0.00 39.10 3.56
356 357 2.107750 CCATCCGAGCTCACGCAT 59.892 61.111 15.40 0.00 39.10 4.73
357 358 3.068064 TCCATCCGAGCTCACGCA 61.068 61.111 15.40 0.00 39.10 5.24
358 359 2.279120 CTCCATCCGAGCTCACGC 60.279 66.667 15.40 0.00 0.00 5.34
359 360 0.108615 AAACTCCATCCGAGCTCACG 60.109 55.000 15.40 2.70 43.01 4.35
360 361 2.100605 AAAACTCCATCCGAGCTCAC 57.899 50.000 15.40 0.00 43.01 3.51
361 362 2.038426 TCAAAAACTCCATCCGAGCTCA 59.962 45.455 15.40 0.00 43.01 4.26
362 363 2.675348 CTCAAAAACTCCATCCGAGCTC 59.325 50.000 2.73 2.73 43.01 4.09
363 364 2.039084 ACTCAAAAACTCCATCCGAGCT 59.961 45.455 0.00 0.00 43.01 4.09
364 365 2.427506 ACTCAAAAACTCCATCCGAGC 58.572 47.619 0.00 0.00 43.01 5.03
365 366 5.438761 AAAACTCAAAAACTCCATCCGAG 57.561 39.130 0.00 0.00 44.95 4.63
366 367 5.845391 AAAAACTCAAAAACTCCATCCGA 57.155 34.783 0.00 0.00 0.00 4.55
405 406 4.247380 GATGCAGAGGCCGGGGAG 62.247 72.222 2.18 0.00 40.13 4.30
407 408 4.559063 CTGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
408 409 2.335092 ATTCTGATGCAGAGGCCGGG 62.335 60.000 2.18 0.00 41.75 5.73
409 410 1.147824 ATTCTGATGCAGAGGCCGG 59.852 57.895 0.00 0.00 41.75 6.13
410 411 1.164662 CCATTCTGATGCAGAGGCCG 61.165 60.000 0.00 0.00 41.75 6.13
411 412 0.106819 ACCATTCTGATGCAGAGGCC 60.107 55.000 0.00 0.00 41.75 5.19
412 413 1.022735 CACCATTCTGATGCAGAGGC 58.977 55.000 0.00 0.00 41.75 4.70
413 414 1.022735 GCACCATTCTGATGCAGAGG 58.977 55.000 0.00 0.00 36.72 3.69
414 415 1.746470 TGCACCATTCTGATGCAGAG 58.254 50.000 0.00 0.00 43.09 3.35
415 416 3.961582 TGCACCATTCTGATGCAGA 57.038 47.368 0.00 0.00 43.09 4.26
418 419 2.032549 GTCGTATGCACCATTCTGATGC 60.033 50.000 0.00 0.00 37.42 3.91
419 420 2.545526 GGTCGTATGCACCATTCTGATG 59.454 50.000 0.00 0.00 33.63 3.07
420 421 2.435805 AGGTCGTATGCACCATTCTGAT 59.564 45.455 0.00 0.00 36.23 2.90
421 422 1.831106 AGGTCGTATGCACCATTCTGA 59.169 47.619 0.00 0.00 36.23 3.27
422 423 2.159043 AGAGGTCGTATGCACCATTCTG 60.159 50.000 0.00 0.00 36.23 3.02
423 424 2.111384 AGAGGTCGTATGCACCATTCT 58.889 47.619 0.00 0.00 36.23 2.40
424 425 2.205074 CAGAGGTCGTATGCACCATTC 58.795 52.381 0.00 0.00 36.23 2.67
425 426 1.743772 GCAGAGGTCGTATGCACCATT 60.744 52.381 7.25 0.00 39.75 3.16
426 427 0.179073 GCAGAGGTCGTATGCACCAT 60.179 55.000 7.25 0.00 39.75 3.55
427 428 1.218047 GCAGAGGTCGTATGCACCA 59.782 57.895 7.25 0.00 39.75 4.17
428 429 0.528684 GAGCAGAGGTCGTATGCACC 60.529 60.000 14.02 2.53 42.45 5.01
429 430 0.867753 CGAGCAGAGGTCGTATGCAC 60.868 60.000 14.02 7.15 46.41 4.57
430 431 1.433471 CGAGCAGAGGTCGTATGCA 59.567 57.895 14.02 0.00 46.41 3.96
431 432 4.310672 CGAGCAGAGGTCGTATGC 57.689 61.111 10.12 3.99 46.41 3.14
437 438 1.040339 ACTCCATCCGAGCAGAGGTC 61.040 60.000 0.00 0.00 43.01 3.85
438 439 0.616111 AACTCCATCCGAGCAGAGGT 60.616 55.000 0.00 0.00 43.01 3.85
439 440 0.539051 AAACTCCATCCGAGCAGAGG 59.461 55.000 0.00 0.00 43.01 3.69
440 441 2.393271 AAAACTCCATCCGAGCAGAG 57.607 50.000 0.00 0.00 43.01 3.35
441 442 2.038426 TCAAAAACTCCATCCGAGCAGA 59.962 45.455 0.00 0.00 43.01 4.26
442 443 2.417933 CTCAAAAACTCCATCCGAGCAG 59.582 50.000 0.00 0.00 43.01 4.24
443 444 2.224523 ACTCAAAAACTCCATCCGAGCA 60.225 45.455 0.00 0.00 43.01 4.26
450 451 3.490348 CCAGTCCACTCAAAAACTCCAT 58.510 45.455 0.00 0.00 0.00 3.41
462 463 1.075482 CCAACATGCCCAGTCCACT 59.925 57.895 0.00 0.00 0.00 4.00
478 479 3.680786 CTGCCACGTCGGACTCCA 61.681 66.667 6.57 0.00 36.56 3.86
494 495 4.814294 GCGGGCATTCGGACGACT 62.814 66.667 0.00 0.00 0.00 4.18
505 506 0.039035 ATAGGAAAGGTTTGCGGGCA 59.961 50.000 0.00 0.00 33.38 5.36
518 519 5.411361 CACAAATCGGAGTCAAACATAGGAA 59.589 40.000 0.00 0.00 0.00 3.36
519 520 4.935205 CACAAATCGGAGTCAAACATAGGA 59.065 41.667 0.00 0.00 0.00 2.94
531 533 4.436050 CGACCAAAATCTCACAAATCGGAG 60.436 45.833 0.00 0.00 0.00 4.63
568 570 7.254852 TCCAACAACACTCACTAAATTTGTTC 58.745 34.615 0.00 0.00 35.52 3.18
569 571 7.164230 TCCAACAACACTCACTAAATTTGTT 57.836 32.000 0.00 0.00 37.59 2.83
579 581 4.712122 TTTTCCTTCCAACAACACTCAC 57.288 40.909 0.00 0.00 0.00 3.51
604 606 5.558273 CGCCGTAAATGTTTGGATCTCATAC 60.558 44.000 0.00 0.00 0.00 2.39
606 608 3.312421 CGCCGTAAATGTTTGGATCTCAT 59.688 43.478 0.00 0.00 0.00 2.90
608 610 2.933906 TCGCCGTAAATGTTTGGATCTC 59.066 45.455 0.00 0.00 0.00 2.75
609 611 2.980568 TCGCCGTAAATGTTTGGATCT 58.019 42.857 0.00 0.00 0.00 2.75
624 635 3.294102 CAACATGATCATCAAATCGCCG 58.706 45.455 4.86 0.00 0.00 6.46
627 638 5.746307 AGTCCAACATGATCATCAAATCG 57.254 39.130 4.86 0.00 0.00 3.34
628 639 5.747197 GCAAGTCCAACATGATCATCAAATC 59.253 40.000 4.86 0.00 0.00 2.17
633 644 2.360165 GGGCAAGTCCAACATGATCATC 59.640 50.000 4.86 0.00 36.21 2.92
634 645 2.024655 AGGGCAAGTCCAACATGATCAT 60.025 45.455 1.18 1.18 36.21 2.45
635 646 1.355381 AGGGCAAGTCCAACATGATCA 59.645 47.619 0.00 0.00 36.21 2.92
636 647 2.134789 AGGGCAAGTCCAACATGATC 57.865 50.000 0.00 0.00 36.21 2.92
637 648 2.610438 AAGGGCAAGTCCAACATGAT 57.390 45.000 0.00 0.00 36.21 2.45
638 649 3.420893 CTTAAGGGCAAGTCCAACATGA 58.579 45.455 0.00 0.00 36.21 3.07
723 737 1.153369 CCATGGTCGACCGCTGATT 60.153 57.895 28.98 10.35 39.43 2.57
727 741 3.771160 GGACCATGGTCGACCGCT 61.771 66.667 33.24 16.42 45.41 5.52
728 742 3.385749 ATGGACCATGGTCGACCGC 62.386 63.158 33.24 21.60 45.41 5.68
1091 1166 3.612004 CGTAGGCGAAGAGAAGACTTTGT 60.612 47.826 0.00 0.00 41.33 2.83
1707 1816 1.292860 CCGTACCGTGTTGCCCTTA 59.707 57.895 0.00 0.00 0.00 2.69
1714 1823 4.668118 CGGCACCCGTACCGTGTT 62.668 66.667 8.95 0.00 44.46 3.32
1870 1979 2.673523 GAGGTGCTGCAGGGATGT 59.326 61.111 17.12 0.00 0.00 3.06
2023 2157 1.897398 GCTGCCCGTGTTGTAAGTCG 61.897 60.000 0.00 0.00 0.00 4.18
2037 2171 0.810648 TTCCAAATCACGATGCTGCC 59.189 50.000 0.00 0.00 0.00 4.85
2055 2190 4.514577 CGATGCCGGCGAGGTCTT 62.515 66.667 23.90 0.00 43.70 3.01
2146 2312 2.354755 ATAGGGAGGTCGCGTAGGCT 62.355 60.000 5.77 0.00 36.88 4.58
2268 2441 0.756294 TCCACATCGCCCGTTGATAT 59.244 50.000 5.82 0.00 0.00 1.63
2275 2448 0.880278 CTACCAATCCACATCGCCCG 60.880 60.000 0.00 0.00 0.00 6.13
2281 2454 1.064463 CCAGCACCTACCAATCCACAT 60.064 52.381 0.00 0.00 0.00 3.21
2282 2455 0.327924 CCAGCACCTACCAATCCACA 59.672 55.000 0.00 0.00 0.00 4.17
2332 2508 1.611977 ACAGCTTGCTACTCGTACACA 59.388 47.619 0.00 0.00 0.00 3.72
2386 2562 2.229784 CCTTCAGTGTGCCATTTCCTTC 59.770 50.000 0.00 0.00 0.00 3.46
2426 2602 5.491982 AGTGTGTCATTCCATTCTAGTTCC 58.508 41.667 0.00 0.00 0.00 3.62
2432 2608 5.248640 CACCTTAGTGTGTCATTCCATTCT 58.751 41.667 0.00 0.00 39.30 2.40
2457 2634 5.913137 AGTCAAAAATGTCAACAGAACCA 57.087 34.783 0.00 0.00 0.00 3.67
2463 2640 9.212641 TCAATTGAAAAGTCAAAAATGTCAACA 57.787 25.926 5.45 0.00 46.66 3.33
2651 4437 9.744468 AGACGACTTTAATTATTTGTTTGCTTT 57.256 25.926 0.00 0.00 0.00 3.51
2678 4466 6.248433 AGGAAGAAATGAGCATTAACCTTGA 58.752 36.000 0.00 0.00 0.00 3.02
2708 4496 2.277084 GTTGACCGAATACGCCTTGAT 58.723 47.619 0.00 0.00 38.29 2.57
2724 4512 4.877619 TGGGCGCCCGTTTGTTGA 62.878 61.111 39.00 17.87 39.42 3.18
2743 4532 1.340991 ACGTTGAATTATGGGCAGCCT 60.341 47.619 12.43 0.00 0.00 4.58
2748 4538 5.123344 ACTGTTTAGACGTTGAATTATGGGC 59.877 40.000 0.00 0.00 0.00 5.36
2753 4543 6.144402 GTCCGAACTGTTTAGACGTTGAATTA 59.856 38.462 7.76 0.00 0.00 1.40
2874 4670 0.178970 AAGGGAGGATGCATCATGGC 60.179 55.000 27.25 10.09 0.00 4.40
2939 4740 1.168714 GGCTCCAGCGAGAAATGTTT 58.831 50.000 0.00 0.00 43.26 2.83
2940 4741 0.326264 AGGCTCCAGCGAGAAATGTT 59.674 50.000 0.00 0.00 43.26 2.71
2975 6229 1.412710 GAAGGTGAGATGGGCGTCATA 59.587 52.381 0.00 0.00 35.97 2.15
2986 6240 2.449031 AATGCACGGCGAAGGTGAGA 62.449 55.000 16.62 0.00 37.60 3.27
3095 6351 9.396022 GTTGAATGGACCTTTGAGAATAATCTA 57.604 33.333 0.00 0.00 35.54 1.98
3155 6421 3.069729 GGCTAGGAATACGTTCAGGATGT 59.930 47.826 0.00 0.00 37.40 3.06
3158 6424 2.957006 GAGGCTAGGAATACGTTCAGGA 59.043 50.000 0.00 0.00 36.01 3.86
3182 6448 2.026262 GTGGAATGGAGGTGGAGCTTAA 60.026 50.000 0.00 0.00 0.00 1.85
3198 6464 1.203162 AGCAATGAATGGTGGGTGGAA 60.203 47.619 0.00 0.00 38.62 3.53
3199 6465 0.409092 AGCAATGAATGGTGGGTGGA 59.591 50.000 0.00 0.00 38.62 4.02
3269 6543 4.156455 TCATCCTTGAATTGGCTAGGAC 57.844 45.455 0.00 0.00 41.42 3.85
3293 6567 9.634163 CACTACATACAAGTTACTATTCACACA 57.366 33.333 0.00 0.00 0.00 3.72
3314 6588 5.344933 GGATTTCCGCAAAAATCAACACTAC 59.655 40.000 17.70 1.38 44.09 2.73
3437 6715 5.010012 CCCCTGGAAATTTGCATGTACTATC 59.990 44.000 13.13 0.00 0.00 2.08
3559 6857 5.638657 GTGCTTGACAATTTTCATGCCATAA 59.361 36.000 22.49 7.67 42.98 1.90
3564 6862 4.053295 AGTGTGCTTGACAATTTTCATGC 58.947 39.130 20.02 20.02 43.59 4.06
3592 6890 8.888579 AGAGCAAATTTTGTAGTATAGCGTAT 57.111 30.769 10.65 0.00 0.00 3.06
3624 6922 3.266636 ACATGACACAAGTGAAACGTCA 58.733 40.909 7.28 0.19 45.86 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.