Multiple sequence alignment - TraesCS2D01G363300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G363300 chr2D 100.000 2288 0 0 1 2288 469161861 469164148 0.000000e+00 4226
1 TraesCS2D01G363300 chr2D 95.464 1411 59 4 303 1713 88299772 88301177 0.000000e+00 2246
2 TraesCS2D01G363300 chr3D 94.476 1430 60 5 303 1715 81833675 81835102 0.000000e+00 2185
3 TraesCS2D01G363300 chr3D 93.355 301 9 3 1 300 81833260 81833550 3.490000e-118 435
4 TraesCS2D01G363300 chr7A 93.067 1428 78 8 305 1715 221705238 221706661 0.000000e+00 2069
5 TraesCS2D01G363300 chr3A 92.538 1434 81 6 303 1713 71154717 71156147 0.000000e+00 2032
6 TraesCS2D01G363300 chr3A 91.894 1431 94 7 303 1716 632271982 632273407 0.000000e+00 1980
7 TraesCS2D01G363300 chr2A 92.270 1423 88 8 303 1709 652573482 652574898 0.000000e+00 1999
8 TraesCS2D01G363300 chr5A 92.566 1372 80 9 359 1714 292010809 292012174 0.000000e+00 1949
9 TraesCS2D01G363300 chr1B 91.767 1409 72 17 303 1710 155745208 155746573 0.000000e+00 1919
10 TraesCS2D01G363300 chr1B 89.157 1448 86 27 303 1713 61492442 61491029 0.000000e+00 1738
11 TraesCS2D01G363300 chr5B 92.224 1286 80 8 443 1712 387883963 387882682 0.000000e+00 1803
12 TraesCS2D01G363300 chr2B 87.139 1143 108 15 599 1713 636460237 636459106 0.000000e+00 1260
13 TraesCS2D01G363300 chr2B 88.696 345 35 3 1709 2052 547830141 547830482 3.520000e-113 418
14 TraesCS2D01G363300 chr7D 93.464 306 9 3 1 305 433075796 433076091 5.800000e-121 444
15 TraesCS2D01G363300 chr7D 89.902 307 20 3 1 306 113010845 113011141 3.570000e-103 385
16 TraesCS2D01G363300 chr7D 91.513 271 16 6 41 305 561525295 561525026 1.290000e-97 366
17 TraesCS2D01G363300 chr7D 87.419 310 27 9 3 305 626150187 626150491 1.680000e-91 346
18 TraesCS2D01G363300 chr5D 92.834 307 14 7 1 305 492732926 492732626 2.700000e-119 438
19 TraesCS2D01G363300 chr5D 88.746 311 22 10 3 305 39089711 39090016 3.590000e-98 368
20 TraesCS2D01G363300 chr5D 91.513 271 16 6 41 305 201828890 201829159 1.290000e-97 366
21 TraesCS2D01G363300 chr5D 87.097 310 29 8 3 305 445798926 445798621 7.830000e-90 340
22 TraesCS2D01G363300 chr6A 91.176 306 16 5 1 305 448243033 448242738 2.740000e-109 405
23 TraesCS2D01G363300 chr1D 90.850 306 20 2 1 305 482488587 482488289 9.840000e-109 403
24 TraesCS2D01G363300 chr1D 91.353 266 16 6 41 300 451193627 451193363 7.770000e-95 357
25 TraesCS2D01G363300 chr1D 88.197 305 23 10 3 299 481925442 481925741 3.620000e-93 351


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G363300 chr2D 469161861 469164148 2287 False 4226 4226 100.0000 1 2288 1 chr2D.!!$F2 2287
1 TraesCS2D01G363300 chr2D 88299772 88301177 1405 False 2246 2246 95.4640 303 1713 1 chr2D.!!$F1 1410
2 TraesCS2D01G363300 chr3D 81833260 81835102 1842 False 1310 2185 93.9155 1 1715 2 chr3D.!!$F1 1714
3 TraesCS2D01G363300 chr7A 221705238 221706661 1423 False 2069 2069 93.0670 305 1715 1 chr7A.!!$F1 1410
4 TraesCS2D01G363300 chr3A 71154717 71156147 1430 False 2032 2032 92.5380 303 1713 1 chr3A.!!$F1 1410
5 TraesCS2D01G363300 chr3A 632271982 632273407 1425 False 1980 1980 91.8940 303 1716 1 chr3A.!!$F2 1413
6 TraesCS2D01G363300 chr2A 652573482 652574898 1416 False 1999 1999 92.2700 303 1709 1 chr2A.!!$F1 1406
7 TraesCS2D01G363300 chr5A 292010809 292012174 1365 False 1949 1949 92.5660 359 1714 1 chr5A.!!$F1 1355
8 TraesCS2D01G363300 chr1B 155745208 155746573 1365 False 1919 1919 91.7670 303 1710 1 chr1B.!!$F1 1407
9 TraesCS2D01G363300 chr1B 61491029 61492442 1413 True 1738 1738 89.1570 303 1713 1 chr1B.!!$R1 1410
10 TraesCS2D01G363300 chr5B 387882682 387883963 1281 True 1803 1803 92.2240 443 1712 1 chr5B.!!$R1 1269
11 TraesCS2D01G363300 chr2B 636459106 636460237 1131 True 1260 1260 87.1390 599 1713 1 chr2B.!!$R1 1114

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
300 302 0.104725 CCTCTCCTTAGGCTCCCCAT 60.105 60.0 0.0 0.0 0.0 4.0 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2086 2272 0.038526 AGGCACAAACCTAGTCGACG 60.039 55.0 10.46 0.0 38.67 5.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 0.254784 AGAAGGGGGATTGGGGGATT 60.255 55.000 0.00 0.00 0.00 3.01
72 73 0.105504 GAAGGGGGATTGGGGGATTG 60.106 60.000 0.00 0.00 0.00 2.67
73 74 1.602675 AAGGGGGATTGGGGGATTGG 61.603 60.000 0.00 0.00 0.00 3.16
74 75 2.614595 GGGGATTGGGGGATTGGG 59.385 66.667 0.00 0.00 0.00 4.12
75 76 2.614595 GGGATTGGGGGATTGGGG 59.385 66.667 0.00 0.00 0.00 4.96
76 77 2.018086 GGGATTGGGGGATTGGGGA 61.018 63.158 0.00 0.00 0.00 4.81
77 78 1.379471 GGGATTGGGGGATTGGGGAT 61.379 60.000 0.00 0.00 0.00 3.85
147 148 3.695606 GAGCAGTGGGTCGAGCCA 61.696 66.667 31.67 31.67 39.65 4.75
170 171 5.047519 CACTGGCCTTCATTTTCTTCTTCAT 60.048 40.000 3.32 0.00 0.00 2.57
209 210 3.418068 GTCGTCGTCGTCCTCGGT 61.418 66.667 1.33 0.00 38.33 4.69
273 274 3.200593 CTCGCTGGCATCTGCACC 61.201 66.667 4.33 0.00 44.36 5.01
300 302 0.104725 CCTCTCCTTAGGCTCCCCAT 60.105 60.000 0.00 0.00 0.00 4.00
301 303 1.347062 CTCTCCTTAGGCTCCCCATC 58.653 60.000 0.00 0.00 0.00 3.51
368 494 1.625315 TGGGTCAGGAATCAGTGTCTG 59.375 52.381 0.00 0.00 0.00 3.51
672 804 2.014128 GAGAGGAGGAGAAGAGTGACG 58.986 57.143 0.00 0.00 0.00 4.35
799 943 0.746659 GTTGACAACAAGGGCAAGCT 59.253 50.000 13.52 0.00 36.64 3.74
818 962 2.772924 CCCCTTCACCCAATGCCT 59.227 61.111 0.00 0.00 0.00 4.75
824 968 0.109532 TTCACCCAATGCCTGACGAA 59.890 50.000 0.00 0.00 0.00 3.85
897 1041 2.765807 ACGAGGGCATGGAGGAGG 60.766 66.667 0.00 0.00 0.00 4.30
1021 1167 2.058675 CCCCTCGACTTCACCAAGT 58.941 57.895 0.00 0.00 46.21 3.16
1028 1174 1.719780 CGACTTCACCAAGTACTTCGC 59.280 52.381 4.77 0.00 43.37 4.70
1034 1180 3.186047 CAAGTACTTCGCCGCGGG 61.186 66.667 29.38 17.41 0.00 6.13
1064 1210 3.817647 GAGTTCAAGCTCAGGAACAACAT 59.182 43.478 20.96 6.78 44.46 2.71
1200 1346 1.979693 GCTCCTCACTCCCGACACT 60.980 63.158 0.00 0.00 0.00 3.55
1363 1526 6.897259 TGGTTTATGCGTAGAACTGTTATC 57.103 37.500 0.00 0.00 0.00 1.75
1456 1626 2.340210 TGTGTGCTACATGGTTGTGT 57.660 45.000 0.00 0.00 36.53 3.72
1586 1756 2.226764 ACACCAGGCAGTGTGGTTA 58.773 52.632 11.91 0.00 46.73 2.85
1673 1859 2.027192 TGAGTGGAGAAGGGTATGCAAC 60.027 50.000 0.00 0.00 0.00 4.17
1705 1891 2.492090 GCACGGCAACCAAACACA 59.508 55.556 0.00 0.00 0.00 3.72
1733 1919 2.331805 CGATGGGCGTCGTAGGAG 59.668 66.667 3.16 0.00 36.88 3.69
1734 1920 2.027751 GATGGGCGTCGTAGGAGC 59.972 66.667 0.00 0.00 0.00 4.70
1738 1924 4.874977 GGCGTCGTAGGAGCCTGC 62.875 72.222 14.71 0.00 46.83 4.85
1743 1929 3.760035 CGTAGGAGCCTGCGTGGT 61.760 66.667 17.23 0.00 44.80 4.16
1744 1930 2.125512 GTAGGAGCCTGCGTGGTG 60.126 66.667 0.00 0.00 38.35 4.17
1745 1931 3.390521 TAGGAGCCTGCGTGGTGG 61.391 66.667 0.00 0.00 38.35 4.61
1752 1938 4.954970 CTGCGTGGTGGTGGGCTT 62.955 66.667 0.00 0.00 0.00 4.35
1753 1939 4.514585 TGCGTGGTGGTGGGCTTT 62.515 61.111 0.00 0.00 0.00 3.51
1754 1940 3.977244 GCGTGGTGGTGGGCTTTG 61.977 66.667 0.00 0.00 0.00 2.77
1755 1941 3.294493 CGTGGTGGTGGGCTTTGG 61.294 66.667 0.00 0.00 0.00 3.28
1756 1942 3.615709 GTGGTGGTGGGCTTTGGC 61.616 66.667 0.00 0.00 37.82 4.52
1794 1980 3.041701 CAGCCATGCCGTTGTTGT 58.958 55.556 0.00 0.00 0.00 3.32
1795 1981 2.252556 CAGCCATGCCGTTGTTGTA 58.747 52.632 0.00 0.00 0.00 2.41
1796 1982 0.168788 CAGCCATGCCGTTGTTGTAG 59.831 55.000 0.00 0.00 0.00 2.74
1797 1983 0.250727 AGCCATGCCGTTGTTGTAGT 60.251 50.000 0.00 0.00 0.00 2.73
1798 1984 0.596082 GCCATGCCGTTGTTGTAGTT 59.404 50.000 0.00 0.00 0.00 2.24
1799 1985 1.665735 GCCATGCCGTTGTTGTAGTTG 60.666 52.381 0.00 0.00 0.00 3.16
1800 1986 1.606668 CCATGCCGTTGTTGTAGTTGT 59.393 47.619 0.00 0.00 0.00 3.32
1801 1987 2.604373 CCATGCCGTTGTTGTAGTTGTG 60.604 50.000 0.00 0.00 0.00 3.33
1802 1988 1.018148 TGCCGTTGTTGTAGTTGTGG 58.982 50.000 0.00 0.00 0.00 4.17
1803 1989 1.018910 GCCGTTGTTGTAGTTGTGGT 58.981 50.000 0.00 0.00 0.00 4.16
1804 1990 1.003223 GCCGTTGTTGTAGTTGTGGTC 60.003 52.381 0.00 0.00 0.00 4.02
1805 1991 2.281517 CCGTTGTTGTAGTTGTGGTCA 58.718 47.619 0.00 0.00 0.00 4.02
1806 1992 2.875933 CCGTTGTTGTAGTTGTGGTCAT 59.124 45.455 0.00 0.00 0.00 3.06
1807 1993 3.059188 CCGTTGTTGTAGTTGTGGTCATC 60.059 47.826 0.00 0.00 0.00 2.92
1808 1994 3.558006 CGTTGTTGTAGTTGTGGTCATCA 59.442 43.478 0.00 0.00 0.00 3.07
1809 1995 4.551990 CGTTGTTGTAGTTGTGGTCATCAC 60.552 45.833 0.00 0.00 46.23 3.06
1816 2002 3.118454 GTGGTCATCACGCGGGTG 61.118 66.667 25.33 25.33 45.78 4.61
1817 2003 4.386951 TGGTCATCACGCGGGTGG 62.387 66.667 29.45 16.29 44.50 4.61
1818 2004 4.388499 GGTCATCACGCGGGTGGT 62.388 66.667 29.45 22.41 44.50 4.16
1819 2005 2.574929 GTCATCACGCGGGTGGTA 59.425 61.111 29.45 14.11 44.50 3.25
1820 2006 1.143183 GTCATCACGCGGGTGGTAT 59.857 57.895 29.45 15.74 44.50 2.73
1821 2007 0.874607 GTCATCACGCGGGTGGTATC 60.875 60.000 29.45 16.21 44.50 2.24
1822 2008 1.040893 TCATCACGCGGGTGGTATCT 61.041 55.000 29.45 9.24 44.50 1.98
1823 2009 0.875908 CATCACGCGGGTGGTATCTG 60.876 60.000 29.45 16.13 44.50 2.90
1824 2010 1.040893 ATCACGCGGGTGGTATCTGA 61.041 55.000 29.45 11.21 44.50 3.27
1825 2011 1.226974 CACGCGGGTGGTATCTGAG 60.227 63.158 23.81 0.00 40.58 3.35
1826 2012 1.379443 ACGCGGGTGGTATCTGAGA 60.379 57.895 12.47 0.00 0.00 3.27
1827 2013 1.065928 CGCGGGTGGTATCTGAGAC 59.934 63.158 0.00 0.00 0.00 3.36
1828 2014 1.065928 GCGGGTGGTATCTGAGACG 59.934 63.158 0.00 0.00 0.00 4.18
1829 2015 1.664321 GCGGGTGGTATCTGAGACGT 61.664 60.000 0.00 0.00 0.00 4.34
1830 2016 0.381089 CGGGTGGTATCTGAGACGTC 59.619 60.000 7.70 7.70 0.00 4.34
1831 2017 0.381089 GGGTGGTATCTGAGACGTCG 59.619 60.000 10.46 0.00 0.00 5.12
1832 2018 0.248539 GGTGGTATCTGAGACGTCGC 60.249 60.000 12.80 12.80 0.00 5.19
1833 2019 0.450583 GTGGTATCTGAGACGTCGCA 59.549 55.000 20.95 20.95 0.00 5.10
1834 2020 0.733150 TGGTATCTGAGACGTCGCAG 59.267 55.000 34.91 34.91 43.74 5.18
1835 2021 0.592754 GGTATCTGAGACGTCGCAGC 60.593 60.000 35.56 24.54 42.40 5.25
1836 2022 0.592754 GTATCTGAGACGTCGCAGCC 60.593 60.000 35.56 24.08 42.40 4.85
1837 2023 2.048312 TATCTGAGACGTCGCAGCCG 62.048 60.000 35.56 19.69 42.40 5.52
1845 2031 3.276846 GTCGCAGCCGTGGTTGTT 61.277 61.111 4.63 0.00 35.54 2.83
1846 2032 2.970324 TCGCAGCCGTGGTTGTTC 60.970 61.111 4.63 0.00 35.54 3.18
1847 2033 4.025401 CGCAGCCGTGGTTGTTCC 62.025 66.667 4.63 0.00 0.00 3.62
1848 2034 3.670377 GCAGCCGTGGTTGTTCCC 61.670 66.667 4.63 0.00 34.77 3.97
1849 2035 2.203280 CAGCCGTGGTTGTTCCCA 60.203 61.111 0.00 0.00 34.77 4.37
1856 2042 3.505835 TGGTTGTTCCCACTGGTTC 57.494 52.632 0.00 0.00 34.77 3.62
1857 2043 0.923358 TGGTTGTTCCCACTGGTTCT 59.077 50.000 0.00 0.00 34.77 3.01
1858 2044 1.318576 GGTTGTTCCCACTGGTTCTG 58.681 55.000 0.00 0.00 0.00 3.02
1859 2045 1.409661 GGTTGTTCCCACTGGTTCTGT 60.410 52.381 0.00 0.00 0.00 3.41
1860 2046 1.947456 GTTGTTCCCACTGGTTCTGTC 59.053 52.381 0.00 0.00 0.00 3.51
1861 2047 1.208706 TGTTCCCACTGGTTCTGTCA 58.791 50.000 0.00 0.00 0.00 3.58
1862 2048 1.774254 TGTTCCCACTGGTTCTGTCAT 59.226 47.619 0.00 0.00 0.00 3.06
1863 2049 2.224523 TGTTCCCACTGGTTCTGTCATC 60.225 50.000 0.00 0.00 0.00 2.92
1864 2050 1.728323 TCCCACTGGTTCTGTCATCA 58.272 50.000 0.00 0.00 0.00 3.07
1865 2051 2.269023 TCCCACTGGTTCTGTCATCAT 58.731 47.619 0.00 0.00 0.00 2.45
1866 2052 2.026915 TCCCACTGGTTCTGTCATCATG 60.027 50.000 0.00 0.00 0.00 3.07
1867 2053 2.026915 CCCACTGGTTCTGTCATCATGA 60.027 50.000 0.00 0.00 0.00 3.07
1869 2055 3.005554 CACTGGTTCTGTCATCATGACC 58.994 50.000 15.44 0.19 46.40 4.02
1870 2056 2.909006 ACTGGTTCTGTCATCATGACCT 59.091 45.455 15.44 0.00 46.40 3.85
1871 2057 3.268330 CTGGTTCTGTCATCATGACCTG 58.732 50.000 15.44 8.27 46.40 4.00
1872 2058 2.012673 GGTTCTGTCATCATGACCTGC 58.987 52.381 15.44 3.15 46.40 4.85
1873 2059 2.355513 GGTTCTGTCATCATGACCTGCT 60.356 50.000 15.44 0.00 46.40 4.24
1874 2060 3.118629 GGTTCTGTCATCATGACCTGCTA 60.119 47.826 15.44 0.00 46.40 3.49
1875 2061 3.808466 TCTGTCATCATGACCTGCTAC 57.192 47.619 15.44 0.00 46.40 3.58
1876 2062 3.099141 TCTGTCATCATGACCTGCTACA 58.901 45.455 15.44 0.00 46.40 2.74
1877 2063 3.131755 TCTGTCATCATGACCTGCTACAG 59.868 47.826 15.44 4.80 46.40 2.74
1878 2064 2.208431 GTCATCATGACCTGCTACAGC 58.792 52.381 6.50 0.00 41.37 4.40
1879 2065 1.202452 TCATCATGACCTGCTACAGCG 60.202 52.381 0.00 0.00 45.83 5.18
1880 2066 1.114627 ATCATGACCTGCTACAGCGA 58.885 50.000 0.00 0.00 45.83 4.93
1881 2067 1.114627 TCATGACCTGCTACAGCGAT 58.885 50.000 0.00 0.00 45.83 4.58
1882 2068 2.306847 TCATGACCTGCTACAGCGATA 58.693 47.619 0.00 0.00 45.83 2.92
1883 2069 2.034685 TCATGACCTGCTACAGCGATAC 59.965 50.000 0.00 0.00 45.83 2.24
1884 2070 1.763968 TGACCTGCTACAGCGATACT 58.236 50.000 0.00 0.00 45.83 2.12
1885 2071 1.676529 TGACCTGCTACAGCGATACTC 59.323 52.381 0.00 0.00 45.83 2.59
1886 2072 1.001158 GACCTGCTACAGCGATACTCC 60.001 57.143 0.00 0.00 45.83 3.85
1887 2073 1.323412 CCTGCTACAGCGATACTCCT 58.677 55.000 0.00 0.00 45.83 3.69
1888 2074 1.683917 CCTGCTACAGCGATACTCCTT 59.316 52.381 0.00 0.00 45.83 3.36
1889 2075 2.287909 CCTGCTACAGCGATACTCCTTC 60.288 54.545 0.00 0.00 45.83 3.46
1890 2076 2.621055 CTGCTACAGCGATACTCCTTCT 59.379 50.000 0.00 0.00 45.83 2.85
1891 2077 2.359214 TGCTACAGCGATACTCCTTCTG 59.641 50.000 0.00 0.00 45.83 3.02
1892 2078 2.359531 GCTACAGCGATACTCCTTCTGT 59.640 50.000 0.00 0.00 40.60 3.41
1893 2079 3.564644 GCTACAGCGATACTCCTTCTGTA 59.435 47.826 0.00 0.00 38.71 2.74
1894 2080 5.351233 CTACAGCGATACTCCTTCTGTAG 57.649 47.826 11.68 11.68 45.76 2.74
1895 2081 2.359531 ACAGCGATACTCCTTCTGTAGC 59.640 50.000 0.00 0.00 36.37 3.58
1896 2082 7.526774 CTACAGCGATACTCCTTCTGTAGCG 62.527 52.000 12.78 7.11 45.44 4.26
1897 2083 1.334243 GCGATACTCCTTCTGTAGCGT 59.666 52.381 11.94 0.00 46.94 5.07
1898 2084 2.223525 GCGATACTCCTTCTGTAGCGTT 60.224 50.000 11.94 0.00 46.94 4.84
1899 2085 3.364062 CGATACTCCTTCTGTAGCGTTG 58.636 50.000 0.00 0.00 42.46 4.10
1900 2086 3.707793 GATACTCCTTCTGTAGCGTTGG 58.292 50.000 0.00 0.00 0.00 3.77
1901 2087 0.608640 ACTCCTTCTGTAGCGTTGGG 59.391 55.000 0.00 0.00 0.00 4.12
1902 2088 0.741221 CTCCTTCTGTAGCGTTGGGC 60.741 60.000 0.00 0.00 44.05 5.36
1911 2097 2.725641 GCGTTGGGCGAAAAGGTT 59.274 55.556 0.00 0.00 44.77 3.50
1912 2098 1.066752 GCGTTGGGCGAAAAGGTTT 59.933 52.632 0.00 0.00 44.77 3.27
1913 2099 0.937699 GCGTTGGGCGAAAAGGTTTC 60.938 55.000 0.00 0.00 44.77 2.78
1914 2100 0.318360 CGTTGGGCGAAAAGGTTTCC 60.318 55.000 0.00 0.00 44.77 3.13
1915 2101 1.037493 GTTGGGCGAAAAGGTTTCCT 58.963 50.000 0.00 0.00 33.87 3.36
1916 2102 1.000607 GTTGGGCGAAAAGGTTTCCTC 60.001 52.381 0.00 0.00 30.89 3.71
1917 2103 0.183971 TGGGCGAAAAGGTTTCCTCA 59.816 50.000 0.00 0.00 30.89 3.86
1918 2104 0.881796 GGGCGAAAAGGTTTCCTCAG 59.118 55.000 0.00 0.00 30.89 3.35
1919 2105 1.605753 GGCGAAAAGGTTTCCTCAGT 58.394 50.000 0.00 0.00 30.89 3.41
1920 2106 1.535896 GGCGAAAAGGTTTCCTCAGTC 59.464 52.381 0.00 0.00 30.89 3.51
1921 2107 2.218603 GCGAAAAGGTTTCCTCAGTCA 58.781 47.619 0.00 0.00 30.89 3.41
1922 2108 2.814336 GCGAAAAGGTTTCCTCAGTCAT 59.186 45.455 0.00 0.00 30.89 3.06
1923 2109 3.365364 GCGAAAAGGTTTCCTCAGTCATG 60.365 47.826 0.00 0.00 30.89 3.07
1924 2110 3.189287 CGAAAAGGTTTCCTCAGTCATGG 59.811 47.826 0.00 0.00 30.89 3.66
1925 2111 2.206576 AAGGTTTCCTCAGTCATGGC 57.793 50.000 0.00 0.00 30.89 4.40
1926 2112 0.329596 AGGTTTCCTCAGTCATGGCC 59.670 55.000 0.00 0.00 0.00 5.36
1927 2113 0.329596 GGTTTCCTCAGTCATGGCCT 59.670 55.000 3.32 0.00 0.00 5.19
1928 2114 1.680249 GGTTTCCTCAGTCATGGCCTC 60.680 57.143 3.32 0.00 0.00 4.70
1929 2115 1.003580 GTTTCCTCAGTCATGGCCTCA 59.996 52.381 3.32 0.00 0.00 3.86
1930 2116 1.588239 TTCCTCAGTCATGGCCTCAT 58.412 50.000 3.32 0.00 0.00 2.90
1942 2128 4.950479 CCTCATGGGCTGACTGTC 57.050 61.111 0.00 0.00 0.00 3.51
1943 2129 2.294890 CCTCATGGGCTGACTGTCT 58.705 57.895 9.51 0.00 0.00 3.41
1944 2130 0.177604 CCTCATGGGCTGACTGTCTC 59.822 60.000 9.51 1.01 0.00 3.36
1945 2131 0.177604 CTCATGGGCTGACTGTCTCC 59.822 60.000 9.51 9.80 0.00 3.71
1946 2132 1.153489 CATGGGCTGACTGTCTCCG 60.153 63.158 9.51 0.00 0.00 4.63
1947 2133 2.362369 ATGGGCTGACTGTCTCCGG 61.362 63.158 9.51 0.00 0.00 5.14
1948 2134 2.997897 GGGCTGACTGTCTCCGGT 60.998 66.667 9.51 0.00 0.00 5.28
1949 2135 2.574399 GGCTGACTGTCTCCGGTC 59.426 66.667 9.51 0.00 45.60 4.79
1950 2136 1.979693 GGCTGACTGTCTCCGGTCT 60.980 63.158 9.51 0.00 45.59 3.85
1951 2137 1.509004 GCTGACTGTCTCCGGTCTC 59.491 63.158 9.51 0.00 45.59 3.36
1952 2138 1.939769 GCTGACTGTCTCCGGTCTCC 61.940 65.000 9.51 0.00 45.59 3.71
1953 2139 0.322997 CTGACTGTCTCCGGTCTCCT 60.323 60.000 9.51 0.00 45.59 3.69
1954 2140 0.322636 TGACTGTCTCCGGTCTCCTC 60.323 60.000 9.51 0.00 45.59 3.71
1955 2141 1.370587 GACTGTCTCCGGTCTCCTCG 61.371 65.000 0.00 0.00 42.66 4.63
1962 2148 3.617368 CGGTCTCCTCGGATGGTT 58.383 61.111 0.00 0.00 0.00 3.67
1963 2149 1.437986 CGGTCTCCTCGGATGGTTC 59.562 63.158 0.00 0.00 0.00 3.62
1964 2150 1.038130 CGGTCTCCTCGGATGGTTCT 61.038 60.000 0.00 0.00 0.00 3.01
1965 2151 0.461961 GGTCTCCTCGGATGGTTCTG 59.538 60.000 0.00 0.00 0.00 3.02
1966 2152 1.475403 GTCTCCTCGGATGGTTCTGA 58.525 55.000 0.00 0.00 35.88 3.27
1967 2153 1.135333 GTCTCCTCGGATGGTTCTGAC 59.865 57.143 0.00 0.00 33.60 3.51
1968 2154 1.006043 TCTCCTCGGATGGTTCTGACT 59.994 52.381 0.00 0.00 33.60 3.41
1969 2155 1.407258 CTCCTCGGATGGTTCTGACTC 59.593 57.143 0.00 0.00 33.60 3.36
1970 2156 0.101399 CCTCGGATGGTTCTGACTCG 59.899 60.000 0.00 0.00 33.60 4.18
1971 2157 0.526524 CTCGGATGGTTCTGACTCGC 60.527 60.000 0.00 0.00 33.60 5.03
1972 2158 0.965866 TCGGATGGTTCTGACTCGCT 60.966 55.000 0.00 0.00 32.14 4.93
1973 2159 0.526524 CGGATGGTTCTGACTCGCTC 60.527 60.000 0.00 0.00 0.00 5.03
1974 2160 0.179097 GGATGGTTCTGACTCGCTCC 60.179 60.000 0.00 0.00 0.00 4.70
1975 2161 0.532573 GATGGTTCTGACTCGCTCCA 59.467 55.000 0.00 0.00 0.00 3.86
1976 2162 1.137872 GATGGTTCTGACTCGCTCCAT 59.862 52.381 0.00 0.00 38.21 3.41
1977 2163 0.247460 TGGTTCTGACTCGCTCCATG 59.753 55.000 0.00 0.00 0.00 3.66
1978 2164 0.532573 GGTTCTGACTCGCTCCATGA 59.467 55.000 0.00 0.00 0.00 3.07
1979 2165 1.470632 GGTTCTGACTCGCTCCATGAG 60.471 57.143 0.00 0.00 39.40 2.90
1989 2175 3.302375 CTCCATGAGCTTGATCCCG 57.698 57.895 0.00 0.00 0.00 5.14
1990 2176 0.250209 CTCCATGAGCTTGATCCCGG 60.250 60.000 0.00 0.00 0.00 5.73
1991 2177 1.228063 CCATGAGCTTGATCCCGGG 60.228 63.158 16.85 16.85 0.00 5.73
1992 2178 1.528824 CATGAGCTTGATCCCGGGT 59.471 57.895 22.86 8.01 0.00 5.28
1993 2179 0.107017 CATGAGCTTGATCCCGGGTT 60.107 55.000 22.86 13.38 0.00 4.11
1994 2180 0.625849 ATGAGCTTGATCCCGGGTTT 59.374 50.000 22.86 9.73 0.00 3.27
1995 2181 0.404040 TGAGCTTGATCCCGGGTTTT 59.596 50.000 22.86 6.73 0.00 2.43
1996 2182 1.095600 GAGCTTGATCCCGGGTTTTC 58.904 55.000 22.86 16.37 0.00 2.29
1997 2183 0.698818 AGCTTGATCCCGGGTTTTCT 59.301 50.000 22.86 8.58 0.00 2.52
1998 2184 0.811281 GCTTGATCCCGGGTTTTCTG 59.189 55.000 22.86 13.37 0.00 3.02
1999 2185 1.463674 CTTGATCCCGGGTTTTCTGG 58.536 55.000 22.86 9.23 41.69 3.86
2000 2186 1.004277 CTTGATCCCGGGTTTTCTGGA 59.996 52.381 22.86 0.00 44.90 3.86
2001 2187 1.068948 TGATCCCGGGTTTTCTGGAA 58.931 50.000 22.86 0.00 44.90 3.53
2002 2188 1.638589 TGATCCCGGGTTTTCTGGAAT 59.361 47.619 22.86 2.10 44.90 3.01
2003 2189 2.847449 TGATCCCGGGTTTTCTGGAATA 59.153 45.455 22.86 0.00 44.90 1.75
2004 2190 3.118038 TGATCCCGGGTTTTCTGGAATAG 60.118 47.826 22.86 0.00 44.90 1.73
2005 2191 2.271777 TCCCGGGTTTTCTGGAATAGT 58.728 47.619 22.86 0.00 44.90 2.12
2006 2192 2.026636 TCCCGGGTTTTCTGGAATAGTG 60.027 50.000 22.86 0.00 44.90 2.74
2007 2193 2.290705 CCCGGGTTTTCTGGAATAGTGT 60.291 50.000 14.18 0.00 44.90 3.55
2008 2194 2.747446 CCGGGTTTTCTGGAATAGTGTG 59.253 50.000 0.00 0.00 44.90 3.82
2009 2195 3.408634 CGGGTTTTCTGGAATAGTGTGT 58.591 45.455 0.00 0.00 0.00 3.72
2010 2196 4.563993 CCGGGTTTTCTGGAATAGTGTGTA 60.564 45.833 0.00 0.00 44.90 2.90
2011 2197 4.630069 CGGGTTTTCTGGAATAGTGTGTAG 59.370 45.833 0.00 0.00 0.00 2.74
2012 2198 4.395231 GGGTTTTCTGGAATAGTGTGTAGC 59.605 45.833 0.00 0.00 0.00 3.58
2013 2199 4.395231 GGTTTTCTGGAATAGTGTGTAGCC 59.605 45.833 0.00 0.00 0.00 3.93
2014 2200 3.906720 TTCTGGAATAGTGTGTAGCCC 57.093 47.619 0.00 0.00 0.00 5.19
2015 2201 1.754803 TCTGGAATAGTGTGTAGCCCG 59.245 52.381 0.00 0.00 0.00 6.13
2016 2202 1.754803 CTGGAATAGTGTGTAGCCCGA 59.245 52.381 0.00 0.00 0.00 5.14
2017 2203 1.479323 TGGAATAGTGTGTAGCCCGAC 59.521 52.381 0.00 0.00 0.00 4.79
2018 2204 1.535437 GGAATAGTGTGTAGCCCGACG 60.535 57.143 0.00 0.00 0.00 5.12
2019 2205 1.133790 GAATAGTGTGTAGCCCGACGT 59.866 52.381 0.00 0.00 0.00 4.34
2020 2206 2.042686 ATAGTGTGTAGCCCGACGTA 57.957 50.000 0.00 0.00 0.00 3.57
2021 2207 2.042686 TAGTGTGTAGCCCGACGTAT 57.957 50.000 0.00 0.00 0.00 3.06
2022 2208 1.180029 AGTGTGTAGCCCGACGTATT 58.820 50.000 0.00 0.00 0.00 1.89
2023 2209 1.133790 AGTGTGTAGCCCGACGTATTC 59.866 52.381 0.00 0.00 0.00 1.75
2024 2210 1.135315 GTGTGTAGCCCGACGTATTCA 60.135 52.381 0.00 0.00 0.00 2.57
2025 2211 1.752498 TGTGTAGCCCGACGTATTCAT 59.248 47.619 0.00 0.00 0.00 2.57
2026 2212 2.223641 TGTGTAGCCCGACGTATTCATC 60.224 50.000 0.00 0.00 0.00 2.92
2027 2213 1.002142 TGTAGCCCGACGTATTCATCG 60.002 52.381 0.00 0.00 38.08 3.84
2028 2214 1.002033 GTAGCCCGACGTATTCATCGT 60.002 52.381 0.00 0.00 44.27 3.73
2036 2222 1.858458 ACGTATTCATCGTCATTGGCG 59.142 47.619 3.82 3.82 36.85 5.69
2037 2223 2.124122 CGTATTCATCGTCATTGGCGA 58.876 47.619 16.54 16.54 42.75 5.54
2038 2224 2.153817 CGTATTCATCGTCATTGGCGAG 59.846 50.000 19.03 10.90 41.83 5.03
2039 2225 1.586422 ATTCATCGTCATTGGCGAGG 58.414 50.000 18.30 18.30 41.83 4.63
2040 2226 0.534873 TTCATCGTCATTGGCGAGGA 59.465 50.000 22.33 22.33 45.27 3.71
2041 2227 0.534873 TCATCGTCATTGGCGAGGAA 59.465 50.000 23.67 9.06 44.27 3.36
2042 2228 0.933097 CATCGTCATTGGCGAGGAAG 59.067 55.000 19.49 5.27 41.80 3.46
2043 2229 0.824109 ATCGTCATTGGCGAGGAAGA 59.176 50.000 19.03 7.46 41.83 2.87
2044 2230 0.824109 TCGTCATTGGCGAGGAAGAT 59.176 50.000 9.68 0.00 34.11 2.40
2045 2231 1.207089 TCGTCATTGGCGAGGAAGATT 59.793 47.619 9.68 0.00 34.11 2.40
2046 2232 2.429250 TCGTCATTGGCGAGGAAGATTA 59.571 45.455 9.68 0.00 34.11 1.75
2047 2233 3.069586 TCGTCATTGGCGAGGAAGATTAT 59.930 43.478 9.68 0.00 34.11 1.28
2048 2234 3.430218 CGTCATTGGCGAGGAAGATTATC 59.570 47.826 4.25 0.00 0.00 1.75
2049 2235 3.748568 GTCATTGGCGAGGAAGATTATCC 59.251 47.826 0.00 0.00 39.96 2.59
2057 2243 2.464157 GGAAGATTATCCTGCCCTCG 57.536 55.000 0.00 0.00 36.50 4.63
2058 2244 1.694696 GGAAGATTATCCTGCCCTCGT 59.305 52.381 0.00 0.00 36.50 4.18
2059 2245 2.104963 GGAAGATTATCCTGCCCTCGTT 59.895 50.000 0.00 0.00 36.50 3.85
2060 2246 2.918712 AGATTATCCTGCCCTCGTTG 57.081 50.000 0.00 0.00 0.00 4.10
2061 2247 1.202698 AGATTATCCTGCCCTCGTTGC 60.203 52.381 0.00 0.00 0.00 4.17
2062 2248 0.839946 ATTATCCTGCCCTCGTTGCT 59.160 50.000 0.00 0.00 0.00 3.91
2063 2249 0.618458 TTATCCTGCCCTCGTTGCTT 59.382 50.000 0.00 0.00 0.00 3.91
2064 2250 0.618458 TATCCTGCCCTCGTTGCTTT 59.382 50.000 0.00 0.00 0.00 3.51
2065 2251 0.678048 ATCCTGCCCTCGTTGCTTTC 60.678 55.000 0.00 0.00 0.00 2.62
2066 2252 2.680913 CCTGCCCTCGTTGCTTTCG 61.681 63.158 0.00 0.00 0.00 3.46
2067 2253 3.314388 CTGCCCTCGTTGCTTTCGC 62.314 63.158 0.00 0.00 0.00 4.70
2068 2254 4.445545 GCCCTCGTTGCTTTCGCG 62.446 66.667 0.00 0.00 39.65 5.87
2069 2255 3.788766 CCCTCGTTGCTTTCGCGG 61.789 66.667 6.13 0.00 39.65 6.46
2070 2256 3.041940 CCTCGTTGCTTTCGCGGT 61.042 61.111 6.13 0.00 39.65 5.68
2071 2257 2.470286 CTCGTTGCTTTCGCGGTC 59.530 61.111 6.13 0.00 39.65 4.79
2072 2258 3.011760 CTCGTTGCTTTCGCGGTCC 62.012 63.158 6.13 0.00 39.65 4.46
2073 2259 4.424430 CGTTGCTTTCGCGGTCCG 62.424 66.667 6.99 6.99 39.65 4.79
2074 2260 3.039588 GTTGCTTTCGCGGTCCGA 61.040 61.111 17.49 0.00 45.77 4.55
2078 2264 3.628280 GCTTTCGCGGTCCGAGAGT 62.628 63.158 17.49 0.00 46.53 3.24
2081 2267 2.670592 TCGCGGTCCGAGAGTGAA 60.671 61.111 17.49 0.00 41.89 3.18
2082 2268 2.257371 CGCGGTCCGAGAGTGAAA 59.743 61.111 17.49 0.00 40.02 2.69
2083 2269 2.087009 CGCGGTCCGAGAGTGAAAC 61.087 63.158 17.49 0.00 40.02 2.78
2084 2270 2.087009 GCGGTCCGAGAGTGAAACG 61.087 63.158 17.49 0.00 45.86 3.60
2085 2271 1.577922 CGGTCCGAGAGTGAAACGA 59.422 57.895 4.91 0.00 45.86 3.85
2086 2272 0.728466 CGGTCCGAGAGTGAAACGAC 60.728 60.000 4.91 0.00 45.86 4.34
2087 2273 0.728466 GGTCCGAGAGTGAAACGACG 60.728 60.000 0.00 0.00 45.86 5.12
2088 2274 0.040603 GTCCGAGAGTGAAACGACGT 60.041 55.000 0.00 0.00 45.86 4.34
2089 2275 0.236711 TCCGAGAGTGAAACGACGTC 59.763 55.000 5.18 5.18 45.86 4.34
2090 2276 1.058590 CCGAGAGTGAAACGACGTCG 61.059 60.000 34.58 34.58 45.86 5.12
2091 2277 0.110956 CGAGAGTGAAACGACGTCGA 60.111 55.000 41.52 19.00 45.86 4.20
2092 2278 1.316414 GAGAGTGAAACGACGTCGAC 58.684 55.000 41.52 28.52 45.86 4.20
2093 2279 0.942962 AGAGTGAAACGACGTCGACT 59.057 50.000 41.52 32.35 45.86 4.18
2094 2280 2.138320 AGAGTGAAACGACGTCGACTA 58.862 47.619 41.52 21.99 45.86 2.59
2095 2281 2.157279 AGAGTGAAACGACGTCGACTAG 59.843 50.000 41.52 15.30 45.86 2.57
2096 2282 1.196354 AGTGAAACGACGTCGACTAGG 59.804 52.381 41.52 14.53 45.86 3.02
2097 2283 1.069636 GTGAAACGACGTCGACTAGGT 60.070 52.381 41.52 17.80 43.02 3.08
2098 2284 1.603802 TGAAACGACGTCGACTAGGTT 59.396 47.619 41.52 22.61 43.02 3.50
2099 2285 2.033299 TGAAACGACGTCGACTAGGTTT 59.967 45.455 41.52 28.82 43.02 3.27
2100 2286 2.042104 AACGACGTCGACTAGGTTTG 57.958 50.000 41.52 11.46 43.02 2.93
2101 2287 0.947244 ACGACGTCGACTAGGTTTGT 59.053 50.000 41.52 14.66 43.02 2.83
2102 2288 1.324718 CGACGTCGACTAGGTTTGTG 58.675 55.000 33.35 0.00 43.02 3.33
2103 2289 1.058404 GACGTCGACTAGGTTTGTGC 58.942 55.000 14.70 0.00 0.00 4.57
2104 2290 0.319297 ACGTCGACTAGGTTTGTGCC 60.319 55.000 14.70 0.00 0.00 5.01
2105 2291 0.038526 CGTCGACTAGGTTTGTGCCT 60.039 55.000 14.70 0.00 42.43 4.75
2106 2292 1.604693 CGTCGACTAGGTTTGTGCCTT 60.605 52.381 14.70 0.00 39.94 4.35
2107 2293 2.067013 GTCGACTAGGTTTGTGCCTTC 58.933 52.381 8.70 0.00 39.94 3.46
2108 2294 1.068474 CGACTAGGTTTGTGCCTTCG 58.932 55.000 0.00 0.00 39.94 3.79
2109 2295 1.604693 CGACTAGGTTTGTGCCTTCGT 60.605 52.381 0.00 0.00 39.94 3.85
2110 2296 2.490991 GACTAGGTTTGTGCCTTCGTT 58.509 47.619 0.00 0.00 39.94 3.85
2111 2297 3.656559 GACTAGGTTTGTGCCTTCGTTA 58.343 45.455 0.00 0.00 39.94 3.18
2112 2298 3.660865 ACTAGGTTTGTGCCTTCGTTAG 58.339 45.455 0.00 0.00 39.94 2.34
2113 2299 2.922740 AGGTTTGTGCCTTCGTTAGA 57.077 45.000 0.00 0.00 34.71 2.10
2114 2300 2.767505 AGGTTTGTGCCTTCGTTAGAG 58.232 47.619 0.00 0.00 34.71 2.43
2115 2301 2.104281 AGGTTTGTGCCTTCGTTAGAGT 59.896 45.455 0.00 0.00 34.71 3.24
2116 2302 2.876550 GGTTTGTGCCTTCGTTAGAGTT 59.123 45.455 0.00 0.00 0.00 3.01
2117 2303 3.303791 GGTTTGTGCCTTCGTTAGAGTTG 60.304 47.826 0.00 0.00 0.00 3.16
2118 2304 2.163818 TGTGCCTTCGTTAGAGTTGG 57.836 50.000 0.00 0.00 0.00 3.77
2119 2305 1.689813 TGTGCCTTCGTTAGAGTTGGA 59.310 47.619 0.00 0.00 0.00 3.53
2120 2306 2.301870 TGTGCCTTCGTTAGAGTTGGAT 59.698 45.455 0.00 0.00 0.00 3.41
2121 2307 2.930682 GTGCCTTCGTTAGAGTTGGATC 59.069 50.000 0.00 0.00 0.00 3.36
2122 2308 2.093658 TGCCTTCGTTAGAGTTGGATCC 60.094 50.000 4.20 4.20 0.00 3.36
2123 2309 2.093658 GCCTTCGTTAGAGTTGGATCCA 60.094 50.000 11.44 11.44 0.00 3.41
2124 2310 3.432326 GCCTTCGTTAGAGTTGGATCCAT 60.432 47.826 17.06 0.06 0.00 3.41
2125 2311 4.372656 CCTTCGTTAGAGTTGGATCCATC 58.627 47.826 17.06 15.36 0.00 3.51
2126 2312 4.141937 CCTTCGTTAGAGTTGGATCCATCA 60.142 45.833 22.09 3.76 0.00 3.07
2127 2313 5.414789 TTCGTTAGAGTTGGATCCATCAA 57.585 39.130 22.09 7.58 0.00 2.57
2128 2314 5.614324 TCGTTAGAGTTGGATCCATCAAT 57.386 39.130 22.09 13.34 0.00 2.57
2129 2315 5.359756 TCGTTAGAGTTGGATCCATCAATG 58.640 41.667 22.09 13.82 0.00 2.82
2130 2316 5.128663 TCGTTAGAGTTGGATCCATCAATGA 59.871 40.000 22.09 15.50 0.00 2.57
2131 2317 5.235186 CGTTAGAGTTGGATCCATCAATGAC 59.765 44.000 22.09 13.61 0.00 3.06
2132 2318 3.801698 AGAGTTGGATCCATCAATGACG 58.198 45.455 22.09 0.00 0.00 4.35
2133 2319 3.198635 AGAGTTGGATCCATCAATGACGT 59.801 43.478 22.09 5.15 0.00 4.34
2134 2320 4.405680 AGAGTTGGATCCATCAATGACGTA 59.594 41.667 22.09 0.00 0.00 3.57
2135 2321 4.697514 AGTTGGATCCATCAATGACGTAG 58.302 43.478 22.09 0.00 0.00 3.51
2149 2335 1.542492 ACGTAGTTCTCGGGATGTGT 58.458 50.000 0.00 0.00 37.78 3.72
2150 2336 1.201647 ACGTAGTTCTCGGGATGTGTG 59.798 52.381 0.00 0.00 37.78 3.82
2151 2337 1.641577 GTAGTTCTCGGGATGTGTGC 58.358 55.000 0.00 0.00 0.00 4.57
2152 2338 0.172578 TAGTTCTCGGGATGTGTGCG 59.827 55.000 0.00 0.00 0.00 5.34
2153 2339 1.374252 GTTCTCGGGATGTGTGCGT 60.374 57.895 0.00 0.00 0.00 5.24
2154 2340 1.374125 TTCTCGGGATGTGTGCGTG 60.374 57.895 0.00 0.00 0.00 5.34
2155 2341 1.811645 TTCTCGGGATGTGTGCGTGA 61.812 55.000 0.00 0.00 0.00 4.35
2156 2342 1.153568 CTCGGGATGTGTGCGTGAT 60.154 57.895 0.00 0.00 0.00 3.06
2157 2343 1.423721 CTCGGGATGTGTGCGTGATG 61.424 60.000 0.00 0.00 0.00 3.07
2158 2344 1.447663 CGGGATGTGTGCGTGATGA 60.448 57.895 0.00 0.00 0.00 2.92
2159 2345 1.018752 CGGGATGTGTGCGTGATGAA 61.019 55.000 0.00 0.00 0.00 2.57
2160 2346 0.729116 GGGATGTGTGCGTGATGAAG 59.271 55.000 0.00 0.00 0.00 3.02
2161 2347 0.097674 GGATGTGTGCGTGATGAAGC 59.902 55.000 0.00 0.00 0.00 3.86
2162 2348 0.798159 GATGTGTGCGTGATGAAGCA 59.202 50.000 0.00 0.00 41.55 3.91
2163 2349 0.800631 ATGTGTGCGTGATGAAGCAG 59.199 50.000 0.00 0.00 44.70 4.24
2164 2350 0.532640 TGTGTGCGTGATGAAGCAGT 60.533 50.000 0.00 0.00 44.70 4.40
2165 2351 0.588252 GTGTGCGTGATGAAGCAGTT 59.412 50.000 0.00 0.00 44.70 3.16
2166 2352 1.798223 GTGTGCGTGATGAAGCAGTTA 59.202 47.619 0.00 0.00 44.70 2.24
2167 2353 2.416547 GTGTGCGTGATGAAGCAGTTAT 59.583 45.455 0.00 0.00 44.70 1.89
2168 2354 3.073678 TGTGCGTGATGAAGCAGTTATT 58.926 40.909 0.00 0.00 44.70 1.40
2169 2355 3.120234 TGTGCGTGATGAAGCAGTTATTG 60.120 43.478 0.00 0.00 44.70 1.90
2170 2356 3.073678 TGCGTGATGAAGCAGTTATTGT 58.926 40.909 0.00 0.00 38.59 2.71
2171 2357 4.092821 GTGCGTGATGAAGCAGTTATTGTA 59.907 41.667 0.00 0.00 44.70 2.41
2172 2358 4.329801 TGCGTGATGAAGCAGTTATTGTAG 59.670 41.667 0.00 0.00 38.59 2.74
2173 2359 4.566759 GCGTGATGAAGCAGTTATTGTAGA 59.433 41.667 0.00 0.00 0.00 2.59
2174 2360 5.500931 GCGTGATGAAGCAGTTATTGTAGAC 60.501 44.000 0.00 0.00 0.00 2.59
2175 2361 5.005779 CGTGATGAAGCAGTTATTGTAGACC 59.994 44.000 0.00 0.00 0.00 3.85
2176 2362 5.874810 GTGATGAAGCAGTTATTGTAGACCA 59.125 40.000 0.00 0.00 0.00 4.02
2177 2363 6.540189 GTGATGAAGCAGTTATTGTAGACCAT 59.460 38.462 0.00 0.00 0.00 3.55
2178 2364 6.539826 TGATGAAGCAGTTATTGTAGACCATG 59.460 38.462 0.00 0.00 0.00 3.66
2179 2365 5.185454 TGAAGCAGTTATTGTAGACCATGG 58.815 41.667 11.19 11.19 0.00 3.66
2180 2366 3.545703 AGCAGTTATTGTAGACCATGGC 58.454 45.455 13.04 4.70 0.00 4.40
2181 2367 3.054434 AGCAGTTATTGTAGACCATGGCA 60.054 43.478 13.04 0.00 0.00 4.92
2182 2368 3.694072 GCAGTTATTGTAGACCATGGCAA 59.306 43.478 13.04 8.39 0.00 4.52
2183 2369 4.438744 GCAGTTATTGTAGACCATGGCAAC 60.439 45.833 13.04 8.23 0.00 4.17
2184 2370 3.938963 AGTTATTGTAGACCATGGCAACG 59.061 43.478 13.04 0.00 42.51 4.10
2185 2371 2.779755 ATTGTAGACCATGGCAACGA 57.220 45.000 13.04 7.88 42.51 3.85
2186 2372 2.552599 TTGTAGACCATGGCAACGAA 57.447 45.000 13.04 0.00 42.51 3.85
2187 2373 2.093306 TGTAGACCATGGCAACGAAG 57.907 50.000 13.04 0.00 42.51 3.79
2189 2375 1.732259 GTAGACCATGGCAACGAAGTG 59.268 52.381 13.04 0.00 45.00 3.16
2190 2376 0.108585 AGACCATGGCAACGAAGTGT 59.891 50.000 13.04 0.00 45.00 3.55
2191 2377 0.238289 GACCATGGCAACGAAGTGTG 59.762 55.000 13.04 0.00 45.00 3.82
2192 2378 0.179032 ACCATGGCAACGAAGTGTGA 60.179 50.000 13.04 0.00 45.00 3.58
2193 2379 0.518636 CCATGGCAACGAAGTGTGAG 59.481 55.000 0.00 0.00 45.00 3.51
2194 2380 1.511850 CATGGCAACGAAGTGTGAGA 58.488 50.000 0.00 0.00 45.00 3.27
2195 2381 2.079158 CATGGCAACGAAGTGTGAGAT 58.921 47.619 0.00 0.00 45.00 2.75
2196 2382 1.795768 TGGCAACGAAGTGTGAGATC 58.204 50.000 0.00 0.00 45.00 2.75
2197 2383 0.716108 GGCAACGAAGTGTGAGATCG 59.284 55.000 0.00 0.00 45.00 3.69
2198 2384 0.716108 GCAACGAAGTGTGAGATCGG 59.284 55.000 0.00 0.00 45.00 4.18
2199 2385 1.350193 CAACGAAGTGTGAGATCGGG 58.650 55.000 0.00 0.00 45.00 5.14
2200 2386 0.246635 AACGAAGTGTGAGATCGGGG 59.753 55.000 0.00 0.00 45.00 5.73
2201 2387 0.898789 ACGAAGTGTGAGATCGGGGT 60.899 55.000 0.00 0.00 42.51 4.95
2202 2388 0.458543 CGAAGTGTGAGATCGGGGTG 60.459 60.000 0.00 0.00 33.15 4.61
2203 2389 0.108138 GAAGTGTGAGATCGGGGTGG 60.108 60.000 0.00 0.00 0.00 4.61
2204 2390 1.553690 AAGTGTGAGATCGGGGTGGG 61.554 60.000 0.00 0.00 0.00 4.61
2205 2391 3.399181 TGTGAGATCGGGGTGGGC 61.399 66.667 0.00 0.00 0.00 5.36
2206 2392 3.083997 GTGAGATCGGGGTGGGCT 61.084 66.667 0.00 0.00 0.00 5.19
2207 2393 3.083349 TGAGATCGGGGTGGGCTG 61.083 66.667 0.00 0.00 0.00 4.85
2208 2394 3.866582 GAGATCGGGGTGGGCTGG 61.867 72.222 0.00 0.00 0.00 4.85
2209 2395 4.741239 AGATCGGGGTGGGCTGGT 62.741 66.667 0.00 0.00 0.00 4.00
2210 2396 4.489771 GATCGGGGTGGGCTGGTG 62.490 72.222 0.00 0.00 0.00 4.17
2214 2400 3.909651 GGGGTGGGCTGGTGGAAA 61.910 66.667 0.00 0.00 0.00 3.13
2215 2401 2.445155 GGGTGGGCTGGTGGAAAT 59.555 61.111 0.00 0.00 0.00 2.17
2216 2402 1.694856 GGGTGGGCTGGTGGAAATA 59.305 57.895 0.00 0.00 0.00 1.40
2217 2403 0.683179 GGGTGGGCTGGTGGAAATAC 60.683 60.000 0.00 0.00 0.00 1.89
2218 2404 1.029947 GGTGGGCTGGTGGAAATACG 61.030 60.000 0.00 0.00 0.00 3.06
2219 2405 1.377987 TGGGCTGGTGGAAATACGC 60.378 57.895 0.00 0.00 0.00 4.42
2220 2406 2.469516 GGGCTGGTGGAAATACGCG 61.470 63.158 3.53 3.53 0.00 6.01
2221 2407 2.469516 GGCTGGTGGAAATACGCGG 61.470 63.158 12.47 0.00 0.00 6.46
2222 2408 2.469516 GCTGGTGGAAATACGCGGG 61.470 63.158 12.47 0.00 0.00 6.13
2223 2409 1.817941 CTGGTGGAAATACGCGGGG 60.818 63.158 12.47 0.00 0.00 5.73
2224 2410 2.269883 GGTGGAAATACGCGGGGT 59.730 61.111 12.47 2.46 0.00 4.95
2225 2411 1.816679 GGTGGAAATACGCGGGGTC 60.817 63.158 12.47 1.52 0.00 4.46
2226 2412 2.169146 GTGGAAATACGCGGGGTCG 61.169 63.158 12.47 0.00 39.81 4.79
2242 2428 4.207281 CGCCGCAGTGCCTAGCTA 62.207 66.667 10.11 0.00 0.00 3.32
2243 2429 2.279784 GCCGCAGTGCCTAGCTAG 60.280 66.667 14.20 14.20 0.00 3.42
2244 2430 2.279784 CCGCAGTGCCTAGCTAGC 60.280 66.667 15.74 6.62 0.00 3.42
2245 2431 2.279784 CGCAGTGCCTAGCTAGCC 60.280 66.667 15.74 4.78 0.00 3.93
2246 2432 2.110006 GCAGTGCCTAGCTAGCCC 59.890 66.667 15.74 8.77 0.00 5.19
2247 2433 2.825264 CAGTGCCTAGCTAGCCCC 59.175 66.667 15.74 6.32 0.00 5.80
2248 2434 2.446802 AGTGCCTAGCTAGCCCCC 60.447 66.667 15.74 3.91 0.00 5.40
2249 2435 3.930012 GTGCCTAGCTAGCCCCCG 61.930 72.222 15.74 2.40 0.00 5.73
2250 2436 4.151891 TGCCTAGCTAGCCCCCGA 62.152 66.667 15.74 0.00 0.00 5.14
2251 2437 2.604991 GCCTAGCTAGCCCCCGAT 60.605 66.667 15.74 0.00 0.00 4.18
2252 2438 2.948720 GCCTAGCTAGCCCCCGATG 61.949 68.421 15.74 0.16 0.00 3.84
2253 2439 2.286523 CCTAGCTAGCCCCCGATGG 61.287 68.421 15.74 0.00 0.00 3.51
2261 2447 4.820744 CCCCCGATGGCCAGGTTG 62.821 72.222 13.05 0.00 0.00 3.77
2262 2448 4.820744 CCCCGATGGCCAGGTTGG 62.821 72.222 13.05 8.80 41.55 3.77
2263 2449 4.820744 CCCGATGGCCAGGTTGGG 62.821 72.222 16.11 16.11 38.19 4.12
2264 2450 3.727258 CCGATGGCCAGGTTGGGA 61.727 66.667 13.05 0.00 38.19 4.37
2265 2451 2.124570 CGATGGCCAGGTTGGGAG 60.125 66.667 13.05 0.00 38.19 4.30
2266 2452 2.971598 CGATGGCCAGGTTGGGAGT 61.972 63.158 13.05 0.00 38.19 3.85
2267 2453 1.379044 GATGGCCAGGTTGGGAGTG 60.379 63.158 13.05 0.00 38.19 3.51
2268 2454 3.590466 ATGGCCAGGTTGGGAGTGC 62.590 63.158 13.05 0.00 38.19 4.40
2269 2455 4.284550 GGCCAGGTTGGGAGTGCA 62.285 66.667 0.00 0.00 38.19 4.57
2270 2456 2.036256 GCCAGGTTGGGAGTGCAT 59.964 61.111 0.00 0.00 38.19 3.96
2271 2457 2.345760 GCCAGGTTGGGAGTGCATG 61.346 63.158 0.00 0.00 38.19 4.06
2272 2458 1.679977 CCAGGTTGGGAGTGCATGG 60.680 63.158 0.00 0.00 32.67 3.66
2273 2459 1.679977 CAGGTTGGGAGTGCATGGG 60.680 63.158 0.00 0.00 0.00 4.00
2274 2460 2.362889 GGTTGGGAGTGCATGGGG 60.363 66.667 0.00 0.00 0.00 4.96
2275 2461 2.440599 GTTGGGAGTGCATGGGGT 59.559 61.111 0.00 0.00 0.00 4.95
2276 2462 1.978617 GTTGGGAGTGCATGGGGTG 60.979 63.158 0.00 0.00 0.00 4.61
2277 2463 2.468868 TTGGGAGTGCATGGGGTGT 61.469 57.895 0.00 0.00 0.00 4.16
2278 2464 2.017668 TTGGGAGTGCATGGGGTGTT 62.018 55.000 0.00 0.00 0.00 3.32
2279 2465 1.978617 GGGAGTGCATGGGGTGTTG 60.979 63.158 0.00 0.00 0.00 3.33
2280 2466 1.978617 GGAGTGCATGGGGTGTTGG 60.979 63.158 0.00 0.00 0.00 3.77
2281 2467 1.228552 GAGTGCATGGGGTGTTGGT 60.229 57.895 0.00 0.00 0.00 3.67
2282 2468 1.526575 GAGTGCATGGGGTGTTGGTG 61.527 60.000 0.00 0.00 0.00 4.17
2283 2469 1.832167 GTGCATGGGGTGTTGGTGT 60.832 57.895 0.00 0.00 0.00 4.16
2284 2470 1.831726 TGCATGGGGTGTTGGTGTG 60.832 57.895 0.00 0.00 0.00 3.82
2285 2471 3.050339 CATGGGGTGTTGGTGTGC 58.950 61.111 0.00 0.00 0.00 4.57
2286 2472 2.203625 ATGGGGTGTTGGTGTGCC 60.204 61.111 0.00 0.00 0.00 5.01
2287 2473 4.885270 TGGGGTGTTGGTGTGCCG 62.885 66.667 0.00 0.00 37.67 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 0.422313 TTGTGTACCCCCTATCCCCA 59.578 55.000 0.00 0.00 0.00 4.96
72 73 0.841961 GTTGTGTACCCCCTATCCCC 59.158 60.000 0.00 0.00 0.00 4.81
73 74 0.466963 CGTTGTGTACCCCCTATCCC 59.533 60.000 0.00 0.00 0.00 3.85
74 75 0.466963 CCGTTGTGTACCCCCTATCC 59.533 60.000 0.00 0.00 0.00 2.59
75 76 1.137675 GTCCGTTGTGTACCCCCTATC 59.862 57.143 0.00 0.00 0.00 2.08
76 77 1.197812 GTCCGTTGTGTACCCCCTAT 58.802 55.000 0.00 0.00 0.00 2.57
77 78 0.178938 TGTCCGTTGTGTACCCCCTA 60.179 55.000 0.00 0.00 0.00 3.53
124 125 4.314440 GACCCACTGCTCCGCACA 62.314 66.667 0.00 0.00 33.79 4.57
147 148 4.473444 TGAAGAAGAAAATGAAGGCCAGT 58.527 39.130 5.01 0.00 0.00 4.00
159 160 0.796312 GCACGGCGATGAAGAAGAAA 59.204 50.000 16.62 0.00 0.00 2.52
200 201 2.745100 TCGACTCCACCGAGGACG 60.745 66.667 0.00 0.00 43.07 4.79
201 202 3.188965 CTCGACTCCACCGAGGAC 58.811 66.667 0.00 0.00 46.85 3.85
273 274 1.202475 GCCTAAGGAGAGGAAGAAGCG 60.202 57.143 0.00 0.00 39.15 4.68
300 302 0.617935 TTCACTGGGCCATGAATCGA 59.382 50.000 20.39 0.00 29.89 3.59
301 303 1.335810 CATTCACTGGGCCATGAATCG 59.664 52.381 27.08 21.26 42.35 3.34
672 804 5.043248 GCATGTAGTTAAAATGGCATGACC 58.957 41.667 0.00 0.00 36.71 4.02
799 943 2.283821 GCATTGGGTGAAGGGGCA 60.284 61.111 0.00 0.00 0.00 5.36
818 962 2.243957 CGGCAGCACAACTTCGTCA 61.244 57.895 0.00 0.00 0.00 4.35
980 1126 1.354031 TGGGGATGCACTCAAGCTTTA 59.646 47.619 0.00 0.00 34.99 1.85
981 1127 0.112995 TGGGGATGCACTCAAGCTTT 59.887 50.000 0.00 0.00 34.99 3.51
1008 1154 1.719780 GCGAAGTACTTGGTGAAGTCG 59.280 52.381 14.14 8.88 41.75 4.18
1034 1180 1.078143 AGCTTGAACTCCATCGGCC 60.078 57.895 0.00 0.00 0.00 6.13
1064 1210 3.393970 CCTTCCAGGAGCAGCCGA 61.394 66.667 0.00 0.00 43.43 5.54
1200 1346 4.377839 GTCGAAGATGATGACCTTGAGA 57.622 45.455 0.00 0.00 40.67 3.27
1363 1526 4.820897 TCAGATAAGCAGTACCACACTTG 58.179 43.478 0.00 0.00 34.26 3.16
1456 1626 3.057736 GTGAGGTTACTAGCACACTTCGA 60.058 47.826 0.00 0.00 39.34 3.71
1717 1903 2.027751 GCTCCTACGACGCCCATC 59.972 66.667 0.00 0.00 0.00 3.51
1718 1904 3.537874 GGCTCCTACGACGCCCAT 61.538 66.667 0.00 0.00 37.86 4.00
1719 1905 4.753662 AGGCTCCTACGACGCCCA 62.754 66.667 0.00 0.00 44.84 5.36
1720 1906 4.208686 CAGGCTCCTACGACGCCC 62.209 72.222 0.00 0.00 44.84 6.13
1721 1907 4.874977 GCAGGCTCCTACGACGCC 62.875 72.222 0.00 0.00 44.09 5.68
1723 1909 3.812019 ACGCAGGCTCCTACGACG 61.812 66.667 14.85 6.86 36.42 5.12
1724 1910 2.202623 CACGCAGGCTCCTACGAC 60.203 66.667 14.85 0.00 36.42 4.34
1725 1911 3.449227 CCACGCAGGCTCCTACGA 61.449 66.667 14.85 0.00 36.42 3.43
1726 1912 3.760035 ACCACGCAGGCTCCTACG 61.760 66.667 6.98 6.98 43.14 3.51
1727 1913 2.125512 CACCACGCAGGCTCCTAC 60.126 66.667 0.00 0.00 43.14 3.18
1728 1914 3.390521 CCACCACGCAGGCTCCTA 61.391 66.667 0.00 0.00 43.14 2.94
1735 1921 4.954970 AAGCCCACCACCACGCAG 62.955 66.667 0.00 0.00 0.00 5.18
1736 1922 4.514585 AAAGCCCACCACCACGCA 62.515 61.111 0.00 0.00 0.00 5.24
1737 1923 3.977244 CAAAGCCCACCACCACGC 61.977 66.667 0.00 0.00 0.00 5.34
1738 1924 3.294493 CCAAAGCCCACCACCACG 61.294 66.667 0.00 0.00 0.00 4.94
1739 1925 3.615709 GCCAAAGCCCACCACCAC 61.616 66.667 0.00 0.00 0.00 4.16
1759 1945 4.410400 CAAGCCCCACCGGTCTCC 62.410 72.222 2.59 0.00 0.00 3.71
1777 1963 0.168788 CTACAACAACGGCATGGCTG 59.831 55.000 18.09 12.13 41.29 4.85
1778 1964 0.250727 ACTACAACAACGGCATGGCT 60.251 50.000 18.09 1.39 0.00 4.75
1779 1965 0.596082 AACTACAACAACGGCATGGC 59.404 50.000 9.69 9.69 0.00 4.40
1780 1966 1.606668 ACAACTACAACAACGGCATGG 59.393 47.619 0.00 0.00 0.00 3.66
1781 1967 2.604373 CCACAACTACAACAACGGCATG 60.604 50.000 0.00 0.00 0.00 4.06
1782 1968 1.606668 CCACAACTACAACAACGGCAT 59.393 47.619 0.00 0.00 0.00 4.40
1783 1969 1.018148 CCACAACTACAACAACGGCA 58.982 50.000 0.00 0.00 0.00 5.69
1784 1970 1.003223 GACCACAACTACAACAACGGC 60.003 52.381 0.00 0.00 0.00 5.68
1785 1971 2.281517 TGACCACAACTACAACAACGG 58.718 47.619 0.00 0.00 0.00 4.44
1786 1972 3.558006 TGATGACCACAACTACAACAACG 59.442 43.478 0.00 0.00 0.00 4.10
1787 1973 4.551990 CGTGATGACCACAACTACAACAAC 60.552 45.833 0.00 0.00 45.98 3.32
1788 1974 3.558006 CGTGATGACCACAACTACAACAA 59.442 43.478 0.00 0.00 45.98 2.83
1789 1975 3.127589 CGTGATGACCACAACTACAACA 58.872 45.455 0.00 0.00 45.98 3.33
1790 1976 2.096417 GCGTGATGACCACAACTACAAC 60.096 50.000 0.00 0.00 45.98 3.32
1791 1977 2.139917 GCGTGATGACCACAACTACAA 58.860 47.619 0.00 0.00 45.98 2.41
1792 1978 1.790755 GCGTGATGACCACAACTACA 58.209 50.000 0.00 0.00 45.98 2.74
1793 1979 0.713883 CGCGTGATGACCACAACTAC 59.286 55.000 0.00 0.00 45.98 2.73
1794 1980 0.389296 CCGCGTGATGACCACAACTA 60.389 55.000 4.92 0.00 45.98 2.24
1795 1981 1.667830 CCGCGTGATGACCACAACT 60.668 57.895 4.92 0.00 45.98 3.16
1796 1982 2.677003 CCCGCGTGATGACCACAAC 61.677 63.158 4.92 0.00 45.98 3.32
1797 1983 2.358125 CCCGCGTGATGACCACAA 60.358 61.111 4.92 0.00 45.98 3.33
1798 1984 3.621805 ACCCGCGTGATGACCACA 61.622 61.111 4.92 0.00 45.98 4.17
1799 1985 3.118454 CACCCGCGTGATGACCAC 61.118 66.667 4.92 0.00 43.14 4.16
1800 1986 4.386951 CCACCCGCGTGATGACCA 62.387 66.667 4.92 0.00 43.14 4.02
1801 1987 2.306255 ATACCACCCGCGTGATGACC 62.306 60.000 4.92 0.00 43.14 4.02
1802 1988 0.874607 GATACCACCCGCGTGATGAC 60.875 60.000 4.92 0.00 43.14 3.06
1803 1989 1.040893 AGATACCACCCGCGTGATGA 61.041 55.000 4.92 0.00 43.14 2.92
1804 1990 0.875908 CAGATACCACCCGCGTGATG 60.876 60.000 4.92 0.00 43.14 3.07
1805 1991 1.040893 TCAGATACCACCCGCGTGAT 61.041 55.000 4.92 0.00 43.14 3.06
1806 1992 1.663379 CTCAGATACCACCCGCGTGA 61.663 60.000 4.92 0.00 43.14 4.35
1807 1993 1.226974 CTCAGATACCACCCGCGTG 60.227 63.158 4.92 0.00 39.91 5.34
1808 1994 1.379443 TCTCAGATACCACCCGCGT 60.379 57.895 4.92 0.00 0.00 6.01
1809 1995 1.065928 GTCTCAGATACCACCCGCG 59.934 63.158 0.00 0.00 0.00 6.46
1810 1996 1.065928 CGTCTCAGATACCACCCGC 59.934 63.158 0.00 0.00 0.00 6.13
1811 1997 0.381089 GACGTCTCAGATACCACCCG 59.619 60.000 8.70 0.00 0.00 5.28
1812 1998 0.381089 CGACGTCTCAGATACCACCC 59.619 60.000 14.70 0.00 0.00 4.61
1813 1999 0.248539 GCGACGTCTCAGATACCACC 60.249 60.000 14.70 0.00 0.00 4.61
1814 2000 0.450583 TGCGACGTCTCAGATACCAC 59.549 55.000 14.70 0.00 0.00 4.16
1815 2001 0.733150 CTGCGACGTCTCAGATACCA 59.267 55.000 27.40 4.69 30.67 3.25
1816 2002 0.592754 GCTGCGACGTCTCAGATACC 60.593 60.000 33.55 15.63 30.67 2.73
1817 2003 0.592754 GGCTGCGACGTCTCAGATAC 60.593 60.000 33.55 20.39 30.67 2.24
1818 2004 1.728069 GGCTGCGACGTCTCAGATA 59.272 57.895 33.55 1.46 30.67 1.98
1819 2005 2.492090 GGCTGCGACGTCTCAGAT 59.508 61.111 33.55 0.00 30.67 2.90
1820 2006 4.103103 CGGCTGCGACGTCTCAGA 62.103 66.667 33.55 2.57 30.67 3.27
1828 2014 3.236618 GAACAACCACGGCTGCGAC 62.237 63.158 0.00 0.00 0.00 5.19
1829 2015 2.970324 GAACAACCACGGCTGCGA 60.970 61.111 0.00 0.00 0.00 5.10
1830 2016 4.025401 GGAACAACCACGGCTGCG 62.025 66.667 0.00 0.00 38.79 5.18
1831 2017 3.670377 GGGAACAACCACGGCTGC 61.670 66.667 0.00 0.00 41.20 5.25
1832 2018 2.203280 TGGGAACAACCACGGCTG 60.203 61.111 0.00 0.00 41.20 4.85
1838 2024 0.923358 AGAACCAGTGGGAACAACCA 59.077 50.000 15.21 0.00 46.06 3.67
1839 2025 1.318576 CAGAACCAGTGGGAACAACC 58.681 55.000 15.21 0.00 46.06 3.77
1840 2026 1.947456 GACAGAACCAGTGGGAACAAC 59.053 52.381 15.21 0.00 46.06 3.32
1841 2027 1.562008 TGACAGAACCAGTGGGAACAA 59.438 47.619 15.21 0.00 46.06 2.83
1842 2028 1.208706 TGACAGAACCAGTGGGAACA 58.791 50.000 15.21 2.10 38.05 3.18
1843 2029 2.224523 TGATGACAGAACCAGTGGGAAC 60.225 50.000 15.21 4.26 38.05 3.62
1844 2030 2.054021 TGATGACAGAACCAGTGGGAA 58.946 47.619 15.21 0.00 38.05 3.97
1845 2031 1.728323 TGATGACAGAACCAGTGGGA 58.272 50.000 15.21 0.00 38.05 4.37
1846 2032 2.026915 TCATGATGACAGAACCAGTGGG 60.027 50.000 15.21 0.00 41.29 4.61
1847 2033 3.005554 GTCATGATGACAGAACCAGTGG 58.994 50.000 19.96 7.91 46.22 4.00
1854 2040 7.864615 GCTGTAGCAGGTCATGATGACAGAA 62.865 48.000 25.17 7.93 44.08 3.02
1855 2041 6.475496 GCTGTAGCAGGTCATGATGACAGA 62.475 50.000 25.17 3.98 44.08 3.41
1856 2042 4.290140 GCTGTAGCAGGTCATGATGACAG 61.290 52.174 25.17 17.84 44.08 3.51
1857 2043 2.419159 GCTGTAGCAGGTCATGATGACA 60.419 50.000 25.17 3.25 44.08 3.58
1858 2044 2.208431 GCTGTAGCAGGTCATGATGAC 58.792 52.381 16.95 16.95 42.76 3.06
1859 2045 1.202452 CGCTGTAGCAGGTCATGATGA 60.202 52.381 0.00 0.00 42.21 2.92
1860 2046 1.202452 TCGCTGTAGCAGGTCATGATG 60.202 52.381 0.00 0.00 42.21 3.07
1861 2047 1.114627 TCGCTGTAGCAGGTCATGAT 58.885 50.000 0.00 0.00 42.21 2.45
1862 2048 1.114627 ATCGCTGTAGCAGGTCATGA 58.885 50.000 4.59 0.00 42.21 3.07
1863 2049 2.035193 AGTATCGCTGTAGCAGGTCATG 59.965 50.000 4.59 0.00 42.21 3.07
1864 2050 2.294791 GAGTATCGCTGTAGCAGGTCAT 59.705 50.000 4.59 0.00 42.21 3.06
1865 2051 1.676529 GAGTATCGCTGTAGCAGGTCA 59.323 52.381 4.59 0.00 42.21 4.02
1866 2052 1.001158 GGAGTATCGCTGTAGCAGGTC 60.001 57.143 4.59 0.00 42.21 3.85
1867 2053 1.033574 GGAGTATCGCTGTAGCAGGT 58.966 55.000 4.59 0.00 42.21 4.00
1868 2054 1.323412 AGGAGTATCGCTGTAGCAGG 58.677 55.000 4.59 0.00 42.21 4.85
1869 2055 2.621055 AGAAGGAGTATCGCTGTAGCAG 59.379 50.000 4.59 0.00 42.21 4.24
1870 2056 2.359214 CAGAAGGAGTATCGCTGTAGCA 59.641 50.000 4.59 0.00 42.21 3.49
1871 2057 2.359531 ACAGAAGGAGTATCGCTGTAGC 59.640 50.000 0.00 0.00 39.65 3.58
1872 2058 5.351233 CTACAGAAGGAGTATCGCTGTAG 57.649 47.826 12.23 12.23 46.30 2.74
1873 2059 3.564644 GCTACAGAAGGAGTATCGCTGTA 59.435 47.826 0.00 0.00 41.00 2.74
1874 2060 2.359531 GCTACAGAAGGAGTATCGCTGT 59.640 50.000 0.00 0.00 42.47 4.40
1875 2061 2.603412 CGCTACAGAAGGAGTATCGCTG 60.603 54.545 0.00 0.00 36.13 5.18
1876 2062 1.604755 CGCTACAGAAGGAGTATCGCT 59.395 52.381 0.00 0.00 34.37 4.93
1877 2063 1.334243 ACGCTACAGAAGGAGTATCGC 59.666 52.381 0.00 0.00 35.26 4.58
1878 2064 3.364062 CAACGCTACAGAAGGAGTATCG 58.636 50.000 0.00 0.00 37.19 2.92
1879 2065 3.491104 CCCAACGCTACAGAAGGAGTATC 60.491 52.174 0.00 0.00 0.00 2.24
1880 2066 2.431057 CCCAACGCTACAGAAGGAGTAT 59.569 50.000 0.00 0.00 0.00 2.12
1881 2067 1.822990 CCCAACGCTACAGAAGGAGTA 59.177 52.381 0.00 0.00 0.00 2.59
1882 2068 0.608640 CCCAACGCTACAGAAGGAGT 59.391 55.000 0.00 0.00 0.00 3.85
1883 2069 0.741221 GCCCAACGCTACAGAAGGAG 60.741 60.000 0.00 0.00 0.00 3.69
1884 2070 1.295423 GCCCAACGCTACAGAAGGA 59.705 57.895 0.00 0.00 0.00 3.36
1885 2071 2.100631 CGCCCAACGCTACAGAAGG 61.101 63.158 0.00 0.00 34.21 3.46
1886 2072 0.669318 TTCGCCCAACGCTACAGAAG 60.669 55.000 0.00 0.00 43.23 2.85
1887 2073 0.249953 TTTCGCCCAACGCTACAGAA 60.250 50.000 0.00 0.00 43.23 3.02
1888 2074 0.249953 TTTTCGCCCAACGCTACAGA 60.250 50.000 0.00 0.00 43.23 3.41
1889 2075 0.165944 CTTTTCGCCCAACGCTACAG 59.834 55.000 0.00 0.00 43.23 2.74
1890 2076 1.231958 CCTTTTCGCCCAACGCTACA 61.232 55.000 0.00 0.00 43.23 2.74
1891 2077 1.232621 ACCTTTTCGCCCAACGCTAC 61.233 55.000 0.00 0.00 43.23 3.58
1892 2078 0.535553 AACCTTTTCGCCCAACGCTA 60.536 50.000 0.00 0.00 43.23 4.26
1893 2079 1.388837 AAACCTTTTCGCCCAACGCT 61.389 50.000 0.00 0.00 43.23 5.07
1894 2080 0.937699 GAAACCTTTTCGCCCAACGC 60.938 55.000 0.00 0.00 43.23 4.84
1895 2081 0.318360 GGAAACCTTTTCGCCCAACG 60.318 55.000 0.00 0.00 45.62 4.10
1896 2082 1.000607 GAGGAAACCTTTTCGCCCAAC 60.001 52.381 0.00 0.00 31.76 3.77
1897 2083 1.324383 GAGGAAACCTTTTCGCCCAA 58.676 50.000 0.00 0.00 31.76 4.12
1898 2084 0.183971 TGAGGAAACCTTTTCGCCCA 59.816 50.000 0.00 0.00 31.76 5.36
1899 2085 0.881796 CTGAGGAAACCTTTTCGCCC 59.118 55.000 0.00 0.00 31.76 6.13
1900 2086 1.535896 GACTGAGGAAACCTTTTCGCC 59.464 52.381 0.00 0.00 31.76 5.54
1901 2087 2.218603 TGACTGAGGAAACCTTTTCGC 58.781 47.619 0.00 0.00 31.76 4.70
1902 2088 3.189287 CCATGACTGAGGAAACCTTTTCG 59.811 47.826 0.00 0.00 31.76 3.46
1903 2089 3.057245 GCCATGACTGAGGAAACCTTTTC 60.057 47.826 0.00 0.00 31.76 2.29
1904 2090 2.893489 GCCATGACTGAGGAAACCTTTT 59.107 45.455 0.00 0.00 31.76 2.27
1905 2091 2.519013 GCCATGACTGAGGAAACCTTT 58.481 47.619 0.00 0.00 31.76 3.11
1906 2092 1.272147 GGCCATGACTGAGGAAACCTT 60.272 52.381 0.00 0.00 31.76 3.50
1907 2093 0.329596 GGCCATGACTGAGGAAACCT 59.670 55.000 0.00 0.00 36.03 3.50
1908 2094 0.329596 AGGCCATGACTGAGGAAACC 59.670 55.000 5.01 0.00 0.00 3.27
1909 2095 1.003580 TGAGGCCATGACTGAGGAAAC 59.996 52.381 5.01 0.00 0.00 2.78
1910 2096 1.361204 TGAGGCCATGACTGAGGAAA 58.639 50.000 5.01 0.00 0.00 3.13
1911 2097 1.588239 ATGAGGCCATGACTGAGGAA 58.412 50.000 5.01 0.00 0.00 3.36
1912 2098 3.329497 ATGAGGCCATGACTGAGGA 57.671 52.632 5.01 0.00 0.00 3.71
1925 2111 0.177604 GAGACAGTCAGCCCATGAGG 59.822 60.000 2.66 0.00 39.07 3.86
1926 2112 0.177604 GGAGACAGTCAGCCCATGAG 59.822 60.000 2.66 0.00 39.07 2.90
1927 2113 1.607801 CGGAGACAGTCAGCCCATGA 61.608 60.000 2.66 0.00 34.79 3.07
1928 2114 1.153489 CGGAGACAGTCAGCCCATG 60.153 63.158 2.66 0.00 0.00 3.66
1929 2115 2.362369 CCGGAGACAGTCAGCCCAT 61.362 63.158 0.00 0.00 0.00 4.00
1930 2116 2.997315 CCGGAGACAGTCAGCCCA 60.997 66.667 0.00 0.00 0.00 5.36
1931 2117 2.997897 ACCGGAGACAGTCAGCCC 60.998 66.667 9.46 0.08 0.00 5.19
1932 2118 1.939769 GAGACCGGAGACAGTCAGCC 61.940 65.000 9.46 2.86 35.38 4.85
1933 2119 1.509004 GAGACCGGAGACAGTCAGC 59.491 63.158 9.46 0.00 35.38 4.26
1934 2120 0.322997 AGGAGACCGGAGACAGTCAG 60.323 60.000 9.46 0.00 35.38 3.51
1935 2121 0.322636 GAGGAGACCGGAGACAGTCA 60.323 60.000 9.46 0.00 35.38 3.41
1936 2122 1.370587 CGAGGAGACCGGAGACAGTC 61.371 65.000 9.46 0.00 0.00 3.51
1937 2123 1.377463 CGAGGAGACCGGAGACAGT 60.377 63.158 9.46 0.00 0.00 3.55
1938 2124 3.503749 CGAGGAGACCGGAGACAG 58.496 66.667 9.46 0.00 0.00 3.51
1945 2131 1.038130 AGAACCATCCGAGGAGACCG 61.038 60.000 0.00 0.00 0.00 4.79
1946 2132 0.461961 CAGAACCATCCGAGGAGACC 59.538 60.000 0.00 0.00 0.00 3.85
1947 2133 1.135333 GTCAGAACCATCCGAGGAGAC 59.865 57.143 0.00 0.00 0.00 3.36
1948 2134 1.006043 AGTCAGAACCATCCGAGGAGA 59.994 52.381 0.00 0.00 0.00 3.71
1949 2135 1.407258 GAGTCAGAACCATCCGAGGAG 59.593 57.143 0.00 0.00 0.00 3.69
1950 2136 1.475403 GAGTCAGAACCATCCGAGGA 58.525 55.000 0.00 0.00 0.00 3.71
1951 2137 0.101399 CGAGTCAGAACCATCCGAGG 59.899 60.000 0.00 0.00 0.00 4.63
1952 2138 0.526524 GCGAGTCAGAACCATCCGAG 60.527 60.000 0.00 0.00 0.00 4.63
1953 2139 0.965866 AGCGAGTCAGAACCATCCGA 60.966 55.000 0.00 0.00 0.00 4.55
1954 2140 0.526524 GAGCGAGTCAGAACCATCCG 60.527 60.000 0.00 0.00 0.00 4.18
1955 2141 0.179097 GGAGCGAGTCAGAACCATCC 60.179 60.000 0.00 0.00 0.00 3.51
1956 2142 0.532573 TGGAGCGAGTCAGAACCATC 59.467 55.000 0.00 0.00 0.00 3.51
1957 2143 1.134580 CATGGAGCGAGTCAGAACCAT 60.135 52.381 0.00 0.00 38.44 3.55
1958 2144 0.247460 CATGGAGCGAGTCAGAACCA 59.753 55.000 0.00 0.00 0.00 3.67
1959 2145 0.532573 TCATGGAGCGAGTCAGAACC 59.467 55.000 0.00 0.00 0.00 3.62
1960 2146 1.919918 CTCATGGAGCGAGTCAGAAC 58.080 55.000 0.00 0.00 0.00 3.01
1961 2147 0.174389 GCTCATGGAGCGAGTCAGAA 59.826 55.000 2.07 0.00 45.85 3.02
1962 2148 1.812525 GCTCATGGAGCGAGTCAGA 59.187 57.895 2.07 0.00 45.85 3.27
1963 2149 4.416533 GCTCATGGAGCGAGTCAG 57.583 61.111 2.07 0.00 45.85 3.51
1971 2157 0.250209 CCGGGATCAAGCTCATGGAG 60.250 60.000 0.00 0.00 0.00 3.86
1972 2158 1.699054 CCCGGGATCAAGCTCATGGA 61.699 60.000 18.48 0.00 0.00 3.41
1973 2159 1.228063 CCCGGGATCAAGCTCATGG 60.228 63.158 18.48 0.00 0.00 3.66
1974 2160 0.107017 AACCCGGGATCAAGCTCATG 60.107 55.000 32.02 0.00 0.00 3.07
1975 2161 0.625849 AAACCCGGGATCAAGCTCAT 59.374 50.000 32.02 0.00 0.00 2.90
1976 2162 0.404040 AAAACCCGGGATCAAGCTCA 59.596 50.000 32.02 0.00 0.00 4.26
1977 2163 1.095600 GAAAACCCGGGATCAAGCTC 58.904 55.000 32.02 9.53 0.00 4.09
1978 2164 0.698818 AGAAAACCCGGGATCAAGCT 59.301 50.000 32.02 13.40 0.00 3.74
1979 2165 0.811281 CAGAAAACCCGGGATCAAGC 59.189 55.000 32.02 11.13 0.00 4.01
1980 2166 1.004277 TCCAGAAAACCCGGGATCAAG 59.996 52.381 32.02 17.11 0.00 3.02
1981 2167 1.068948 TCCAGAAAACCCGGGATCAA 58.931 50.000 32.02 9.11 0.00 2.57
1982 2168 1.068948 TTCCAGAAAACCCGGGATCA 58.931 50.000 32.02 3.82 30.74 2.92
1983 2169 2.437085 ATTCCAGAAAACCCGGGATC 57.563 50.000 32.02 21.63 30.74 3.36
1984 2170 2.850568 ACTATTCCAGAAAACCCGGGAT 59.149 45.455 32.02 14.52 30.74 3.85
1985 2171 2.026636 CACTATTCCAGAAAACCCGGGA 60.027 50.000 32.02 0.00 0.00 5.14
1986 2172 2.290705 ACACTATTCCAGAAAACCCGGG 60.291 50.000 22.25 22.25 0.00 5.73
1987 2173 2.747446 CACACTATTCCAGAAAACCCGG 59.253 50.000 0.00 0.00 0.00 5.73
1988 2174 3.408634 ACACACTATTCCAGAAAACCCG 58.591 45.455 0.00 0.00 0.00 5.28
1989 2175 4.395231 GCTACACACTATTCCAGAAAACCC 59.605 45.833 0.00 0.00 0.00 4.11
1990 2176 4.395231 GGCTACACACTATTCCAGAAAACC 59.605 45.833 0.00 0.00 0.00 3.27
1991 2177 4.395231 GGGCTACACACTATTCCAGAAAAC 59.605 45.833 0.00 0.00 0.00 2.43
1992 2178 4.585879 GGGCTACACACTATTCCAGAAAA 58.414 43.478 0.00 0.00 0.00 2.29
1993 2179 3.369052 CGGGCTACACACTATTCCAGAAA 60.369 47.826 0.00 0.00 0.00 2.52
1994 2180 2.167693 CGGGCTACACACTATTCCAGAA 59.832 50.000 0.00 0.00 0.00 3.02
1995 2181 1.754803 CGGGCTACACACTATTCCAGA 59.245 52.381 0.00 0.00 0.00 3.86
1996 2182 1.754803 TCGGGCTACACACTATTCCAG 59.245 52.381 0.00 0.00 0.00 3.86
1997 2183 1.479323 GTCGGGCTACACACTATTCCA 59.521 52.381 0.00 0.00 0.00 3.53
1998 2184 1.535437 CGTCGGGCTACACACTATTCC 60.535 57.143 0.00 0.00 0.00 3.01
1999 2185 1.133790 ACGTCGGGCTACACACTATTC 59.866 52.381 0.00 0.00 0.00 1.75
2000 2186 1.180029 ACGTCGGGCTACACACTATT 58.820 50.000 0.00 0.00 0.00 1.73
2001 2187 2.042686 TACGTCGGGCTACACACTAT 57.957 50.000 0.00 0.00 0.00 2.12
2002 2188 2.042686 ATACGTCGGGCTACACACTA 57.957 50.000 0.00 0.00 0.00 2.74
2003 2189 1.133790 GAATACGTCGGGCTACACACT 59.866 52.381 0.00 0.00 0.00 3.55
2004 2190 1.135315 TGAATACGTCGGGCTACACAC 60.135 52.381 0.00 0.00 0.00 3.82
2005 2191 1.175654 TGAATACGTCGGGCTACACA 58.824 50.000 0.00 0.00 0.00 3.72
2006 2192 2.391879 GATGAATACGTCGGGCTACAC 58.608 52.381 0.00 0.00 0.00 2.90
2007 2193 2.787601 GATGAATACGTCGGGCTACA 57.212 50.000 0.00 0.00 0.00 2.74
2016 2202 1.858458 CGCCAATGACGATGAATACGT 59.142 47.619 0.00 0.00 46.58 3.57
2017 2203 2.124122 TCGCCAATGACGATGAATACG 58.876 47.619 0.00 0.00 33.96 3.06
2018 2204 2.476619 CCTCGCCAATGACGATGAATAC 59.523 50.000 0.00 0.00 39.12 1.89
2019 2205 2.364002 TCCTCGCCAATGACGATGAATA 59.636 45.455 0.00 0.00 39.12 1.75
2020 2206 1.138859 TCCTCGCCAATGACGATGAAT 59.861 47.619 0.00 0.00 39.12 2.57
2021 2207 0.534873 TCCTCGCCAATGACGATGAA 59.465 50.000 0.00 0.00 39.12 2.57
2022 2208 0.534873 TTCCTCGCCAATGACGATGA 59.465 50.000 0.00 0.00 39.12 2.92
2023 2209 0.933097 CTTCCTCGCCAATGACGATG 59.067 55.000 0.00 0.00 39.12 3.84
2024 2210 0.824109 TCTTCCTCGCCAATGACGAT 59.176 50.000 0.00 0.00 39.12 3.73
2025 2211 0.824109 ATCTTCCTCGCCAATGACGA 59.176 50.000 0.00 0.00 38.02 4.20
2026 2212 1.656652 AATCTTCCTCGCCAATGACG 58.343 50.000 0.00 0.00 0.00 4.35
2027 2213 3.748568 GGATAATCTTCCTCGCCAATGAC 59.251 47.826 0.00 0.00 32.68 3.06
2028 2214 3.648067 AGGATAATCTTCCTCGCCAATGA 59.352 43.478 0.00 0.00 42.71 2.57
2029 2215 3.750130 CAGGATAATCTTCCTCGCCAATG 59.250 47.826 0.00 0.00 44.54 2.82
2030 2216 3.808618 GCAGGATAATCTTCCTCGCCAAT 60.809 47.826 0.00 0.00 44.54 3.16
2031 2217 2.485479 GCAGGATAATCTTCCTCGCCAA 60.485 50.000 0.00 0.00 44.54 4.52
2032 2218 1.070758 GCAGGATAATCTTCCTCGCCA 59.929 52.381 0.00 0.00 44.54 5.69
2033 2219 1.609320 GGCAGGATAATCTTCCTCGCC 60.609 57.143 14.08 14.08 44.54 5.54
2034 2220 1.609320 GGGCAGGATAATCTTCCTCGC 60.609 57.143 0.00 0.00 44.54 5.03
2035 2221 1.974236 AGGGCAGGATAATCTTCCTCG 59.026 52.381 0.00 0.00 44.54 4.63
2036 2222 2.028567 CGAGGGCAGGATAATCTTCCTC 60.029 54.545 0.00 0.00 44.54 3.71
2038 2224 1.694696 ACGAGGGCAGGATAATCTTCC 59.305 52.381 0.00 0.00 35.90 3.46
2039 2225 3.134458 CAACGAGGGCAGGATAATCTTC 58.866 50.000 0.00 0.00 0.00 2.87
2040 2226 2.746472 GCAACGAGGGCAGGATAATCTT 60.746 50.000 0.00 0.00 0.00 2.40
2041 2227 1.202698 GCAACGAGGGCAGGATAATCT 60.203 52.381 0.00 0.00 0.00 2.40
2042 2228 1.202698 AGCAACGAGGGCAGGATAATC 60.203 52.381 0.00 0.00 0.00 1.75
2043 2229 0.839946 AGCAACGAGGGCAGGATAAT 59.160 50.000 0.00 0.00 0.00 1.28
2044 2230 0.618458 AAGCAACGAGGGCAGGATAA 59.382 50.000 0.00 0.00 0.00 1.75
2045 2231 0.618458 AAAGCAACGAGGGCAGGATA 59.382 50.000 0.00 0.00 0.00 2.59
2046 2232 0.678048 GAAAGCAACGAGGGCAGGAT 60.678 55.000 0.00 0.00 0.00 3.24
2047 2233 1.302511 GAAAGCAACGAGGGCAGGA 60.303 57.895 0.00 0.00 0.00 3.86
2048 2234 2.680913 CGAAAGCAACGAGGGCAGG 61.681 63.158 0.00 0.00 0.00 4.85
2049 2235 2.863153 CGAAAGCAACGAGGGCAG 59.137 61.111 0.00 0.00 0.00 4.85
2061 2247 1.801913 CACTCTCGGACCGCGAAAG 60.802 63.158 8.23 0.84 0.00 2.62
2062 2248 1.798234 TTCACTCTCGGACCGCGAAA 61.798 55.000 8.23 0.00 0.00 3.46
2063 2249 1.798234 TTTCACTCTCGGACCGCGAA 61.798 55.000 8.23 3.87 0.00 4.70
2064 2250 2.263021 TTTCACTCTCGGACCGCGA 61.263 57.895 8.23 7.88 0.00 5.87
2065 2251 2.087009 GTTTCACTCTCGGACCGCG 61.087 63.158 9.66 2.35 0.00 6.46
2066 2252 2.087009 CGTTTCACTCTCGGACCGC 61.087 63.158 9.66 0.00 0.00 5.68
2067 2253 0.728466 GTCGTTTCACTCTCGGACCG 60.728 60.000 7.84 7.84 0.00 4.79
2068 2254 0.728466 CGTCGTTTCACTCTCGGACC 60.728 60.000 0.00 0.00 0.00 4.46
2069 2255 0.040603 ACGTCGTTTCACTCTCGGAC 60.041 55.000 0.00 0.00 0.00 4.79
2070 2256 0.236711 GACGTCGTTTCACTCTCGGA 59.763 55.000 0.00 0.00 0.00 4.55
2071 2257 1.058590 CGACGTCGTTTCACTCTCGG 61.059 60.000 29.08 0.00 34.11 4.63
2072 2258 0.110956 TCGACGTCGTTTCACTCTCG 60.111 55.000 34.40 8.18 40.80 4.04
2073 2259 1.070041 AGTCGACGTCGTTTCACTCTC 60.070 52.381 34.40 15.29 40.80 3.20
2074 2260 0.942962 AGTCGACGTCGTTTCACTCT 59.057 50.000 34.40 18.96 40.80 3.24
2075 2261 2.493967 CTAGTCGACGTCGTTTCACTC 58.506 52.381 34.40 17.35 40.80 3.51
2076 2262 1.196354 CCTAGTCGACGTCGTTTCACT 59.804 52.381 34.40 29.92 40.80 3.41
2077 2263 1.069636 ACCTAGTCGACGTCGTTTCAC 60.070 52.381 34.40 25.27 40.80 3.18
2078 2264 1.229428 ACCTAGTCGACGTCGTTTCA 58.771 50.000 34.40 15.32 40.80 2.69
2079 2265 2.322371 AACCTAGTCGACGTCGTTTC 57.678 50.000 34.40 24.65 40.80 2.78
2080 2266 2.223572 ACAAACCTAGTCGACGTCGTTT 60.224 45.455 34.40 23.49 40.80 3.60
2081 2267 1.334869 ACAAACCTAGTCGACGTCGTT 59.665 47.619 34.40 25.57 40.80 3.85
2082 2268 0.947244 ACAAACCTAGTCGACGTCGT 59.053 50.000 34.40 20.79 40.80 4.34
2083 2269 1.324718 CACAAACCTAGTCGACGTCG 58.675 55.000 31.30 31.30 41.45 5.12
2084 2270 1.058404 GCACAAACCTAGTCGACGTC 58.942 55.000 10.46 5.18 0.00 4.34
2085 2271 0.319297 GGCACAAACCTAGTCGACGT 60.319 55.000 10.46 0.00 0.00 4.34
2086 2272 0.038526 AGGCACAAACCTAGTCGACG 60.039 55.000 10.46 0.00 38.67 5.12
2087 2273 2.067013 GAAGGCACAAACCTAGTCGAC 58.933 52.381 7.70 7.70 39.93 4.20
2088 2274 1.336517 CGAAGGCACAAACCTAGTCGA 60.337 52.381 0.00 0.00 40.82 4.20
2089 2275 1.068474 CGAAGGCACAAACCTAGTCG 58.932 55.000 0.00 0.00 39.93 4.18
2090 2276 2.165319 ACGAAGGCACAAACCTAGTC 57.835 50.000 0.00 0.00 39.93 2.59
2091 2277 2.632987 AACGAAGGCACAAACCTAGT 57.367 45.000 0.00 0.00 39.93 2.57
2092 2278 3.921677 TCTAACGAAGGCACAAACCTAG 58.078 45.455 0.00 0.00 39.93 3.02
2093 2279 3.322828 ACTCTAACGAAGGCACAAACCTA 59.677 43.478 0.00 0.00 39.93 3.08
2094 2280 2.104281 ACTCTAACGAAGGCACAAACCT 59.896 45.455 0.00 0.00 43.91 3.50
2095 2281 2.490991 ACTCTAACGAAGGCACAAACC 58.509 47.619 0.00 0.00 0.00 3.27
2096 2282 3.303791 CCAACTCTAACGAAGGCACAAAC 60.304 47.826 0.00 0.00 0.00 2.93
2097 2283 2.875933 CCAACTCTAACGAAGGCACAAA 59.124 45.455 0.00 0.00 0.00 2.83
2098 2284 2.103432 TCCAACTCTAACGAAGGCACAA 59.897 45.455 0.00 0.00 0.00 3.33
2099 2285 1.689813 TCCAACTCTAACGAAGGCACA 59.310 47.619 0.00 0.00 0.00 4.57
2100 2286 2.450609 TCCAACTCTAACGAAGGCAC 57.549 50.000 0.00 0.00 0.00 5.01
2101 2287 2.093658 GGATCCAACTCTAACGAAGGCA 60.094 50.000 6.95 0.00 0.00 4.75
2102 2288 2.093658 TGGATCCAACTCTAACGAAGGC 60.094 50.000 13.46 0.00 0.00 4.35
2103 2289 3.887621 TGGATCCAACTCTAACGAAGG 57.112 47.619 13.46 0.00 0.00 3.46
2104 2290 5.011090 TGATGGATCCAACTCTAACGAAG 57.989 43.478 20.67 0.00 0.00 3.79
2105 2291 5.414789 TTGATGGATCCAACTCTAACGAA 57.585 39.130 20.67 1.40 0.00 3.85
2106 2292 5.128663 TCATTGATGGATCCAACTCTAACGA 59.871 40.000 20.67 8.10 0.00 3.85
2107 2293 5.235186 GTCATTGATGGATCCAACTCTAACG 59.765 44.000 20.67 5.98 0.00 3.18
2108 2294 5.235186 CGTCATTGATGGATCCAACTCTAAC 59.765 44.000 20.67 12.34 0.00 2.34
2109 2295 5.104941 ACGTCATTGATGGATCCAACTCTAA 60.105 40.000 20.67 7.13 0.00 2.10
2110 2296 4.405680 ACGTCATTGATGGATCCAACTCTA 59.594 41.667 20.67 10.24 0.00 2.43
2111 2297 3.198635 ACGTCATTGATGGATCCAACTCT 59.801 43.478 20.67 0.78 0.00 3.24
2112 2298 3.535561 ACGTCATTGATGGATCCAACTC 58.464 45.455 20.67 13.61 0.00 3.01
2113 2299 3.634397 ACGTCATTGATGGATCCAACT 57.366 42.857 20.67 2.17 0.00 3.16
2114 2300 4.442706 ACTACGTCATTGATGGATCCAAC 58.557 43.478 20.67 17.50 0.00 3.77
2115 2301 4.753516 ACTACGTCATTGATGGATCCAA 57.246 40.909 20.67 2.02 0.00 3.53
2116 2302 4.405680 AGAACTACGTCATTGATGGATCCA 59.594 41.667 18.88 18.88 0.00 3.41
2117 2303 4.950050 AGAACTACGTCATTGATGGATCC 58.050 43.478 4.20 4.20 0.00 3.36
2118 2304 4.677378 CGAGAACTACGTCATTGATGGATC 59.323 45.833 10.52 0.00 0.00 3.36
2119 2305 4.499865 CCGAGAACTACGTCATTGATGGAT 60.500 45.833 10.52 0.00 0.00 3.41
2120 2306 3.181490 CCGAGAACTACGTCATTGATGGA 60.181 47.826 10.52 0.54 0.00 3.41
2121 2307 3.116300 CCGAGAACTACGTCATTGATGG 58.884 50.000 10.52 0.00 0.00 3.51
2122 2308 3.116300 CCCGAGAACTACGTCATTGATG 58.884 50.000 4.29 4.29 0.00 3.07
2123 2309 3.021695 TCCCGAGAACTACGTCATTGAT 58.978 45.455 0.00 0.00 0.00 2.57
2124 2310 2.439409 TCCCGAGAACTACGTCATTGA 58.561 47.619 0.00 0.00 0.00 2.57
2125 2311 2.933495 TCCCGAGAACTACGTCATTG 57.067 50.000 0.00 0.00 0.00 2.82
2126 2312 2.758979 ACATCCCGAGAACTACGTCATT 59.241 45.455 0.00 0.00 0.00 2.57
2127 2313 2.099263 CACATCCCGAGAACTACGTCAT 59.901 50.000 0.00 0.00 0.00 3.06
2128 2314 1.471287 CACATCCCGAGAACTACGTCA 59.529 52.381 0.00 0.00 0.00 4.35
2129 2315 1.471684 ACACATCCCGAGAACTACGTC 59.528 52.381 0.00 0.00 0.00 4.34
2130 2316 1.201647 CACACATCCCGAGAACTACGT 59.798 52.381 0.00 0.00 0.00 3.57
2131 2317 1.909376 CACACATCCCGAGAACTACG 58.091 55.000 0.00 0.00 0.00 3.51
2132 2318 1.641577 GCACACATCCCGAGAACTAC 58.358 55.000 0.00 0.00 0.00 2.73
2133 2319 0.172578 CGCACACATCCCGAGAACTA 59.827 55.000 0.00 0.00 0.00 2.24
2134 2320 1.079819 CGCACACATCCCGAGAACT 60.080 57.895 0.00 0.00 0.00 3.01
2135 2321 1.374252 ACGCACACATCCCGAGAAC 60.374 57.895 0.00 0.00 0.00 3.01
2136 2322 1.374125 CACGCACACATCCCGAGAA 60.374 57.895 0.00 0.00 0.00 2.87
2137 2323 1.604147 ATCACGCACACATCCCGAGA 61.604 55.000 0.00 0.00 0.00 4.04
2138 2324 1.153568 ATCACGCACACATCCCGAG 60.154 57.895 0.00 0.00 0.00 4.63
2139 2325 1.447663 CATCACGCACACATCCCGA 60.448 57.895 0.00 0.00 0.00 5.14
2140 2326 1.018752 TTCATCACGCACACATCCCG 61.019 55.000 0.00 0.00 0.00 5.14
2141 2327 0.729116 CTTCATCACGCACACATCCC 59.271 55.000 0.00 0.00 0.00 3.85
2142 2328 0.097674 GCTTCATCACGCACACATCC 59.902 55.000 0.00 0.00 0.00 3.51
2143 2329 0.798159 TGCTTCATCACGCACACATC 59.202 50.000 0.00 0.00 0.00 3.06
2144 2330 0.800631 CTGCTTCATCACGCACACAT 59.199 50.000 0.00 0.00 31.95 3.21
2145 2331 0.532640 ACTGCTTCATCACGCACACA 60.533 50.000 0.00 0.00 31.95 3.72
2146 2332 0.588252 AACTGCTTCATCACGCACAC 59.412 50.000 0.00 0.00 31.95 3.82
2147 2333 2.162319 TAACTGCTTCATCACGCACA 57.838 45.000 0.00 0.00 31.95 4.57
2148 2334 3.120199 ACAATAACTGCTTCATCACGCAC 60.120 43.478 0.00 0.00 31.95 5.34
2149 2335 3.073678 ACAATAACTGCTTCATCACGCA 58.926 40.909 0.00 0.00 34.54 5.24
2150 2336 3.747099 ACAATAACTGCTTCATCACGC 57.253 42.857 0.00 0.00 0.00 5.34
2151 2337 5.005779 GGTCTACAATAACTGCTTCATCACG 59.994 44.000 0.00 0.00 0.00 4.35
2152 2338 5.874810 TGGTCTACAATAACTGCTTCATCAC 59.125 40.000 0.00 0.00 0.00 3.06
2153 2339 6.048732 TGGTCTACAATAACTGCTTCATCA 57.951 37.500 0.00 0.00 0.00 3.07
2154 2340 6.017605 CCATGGTCTACAATAACTGCTTCATC 60.018 42.308 2.57 0.00 0.00 2.92
2155 2341 5.824624 CCATGGTCTACAATAACTGCTTCAT 59.175 40.000 2.57 0.00 0.00 2.57
2156 2342 5.185454 CCATGGTCTACAATAACTGCTTCA 58.815 41.667 2.57 0.00 0.00 3.02
2157 2343 4.035675 GCCATGGTCTACAATAACTGCTTC 59.964 45.833 14.67 0.00 0.00 3.86
2158 2344 3.947834 GCCATGGTCTACAATAACTGCTT 59.052 43.478 14.67 0.00 0.00 3.91
2159 2345 3.054434 TGCCATGGTCTACAATAACTGCT 60.054 43.478 14.67 0.00 0.00 4.24
2160 2346 3.278574 TGCCATGGTCTACAATAACTGC 58.721 45.455 14.67 0.00 0.00 4.40
2161 2347 4.201812 CGTTGCCATGGTCTACAATAACTG 60.202 45.833 14.67 0.00 0.00 3.16
2162 2348 3.938963 CGTTGCCATGGTCTACAATAACT 59.061 43.478 14.67 0.00 0.00 2.24
2163 2349 3.936453 TCGTTGCCATGGTCTACAATAAC 59.064 43.478 14.67 4.54 0.00 1.89
2164 2350 4.209307 TCGTTGCCATGGTCTACAATAA 57.791 40.909 14.67 0.00 0.00 1.40
2165 2351 3.897141 TCGTTGCCATGGTCTACAATA 57.103 42.857 14.67 0.00 0.00 1.90
2166 2352 2.779755 TCGTTGCCATGGTCTACAAT 57.220 45.000 14.67 0.00 0.00 2.71
2167 2353 2.224426 ACTTCGTTGCCATGGTCTACAA 60.224 45.455 14.67 5.99 0.00 2.41
2168 2354 1.346395 ACTTCGTTGCCATGGTCTACA 59.654 47.619 14.67 0.00 0.00 2.74
2169 2355 1.732259 CACTTCGTTGCCATGGTCTAC 59.268 52.381 14.67 11.47 0.00 2.59
2170 2356 1.346395 ACACTTCGTTGCCATGGTCTA 59.654 47.619 14.67 0.00 0.00 2.59
2171 2357 0.108585 ACACTTCGTTGCCATGGTCT 59.891 50.000 14.67 0.00 0.00 3.85
2172 2358 0.238289 CACACTTCGTTGCCATGGTC 59.762 55.000 14.67 6.41 0.00 4.02
2173 2359 0.179032 TCACACTTCGTTGCCATGGT 60.179 50.000 14.67 0.00 0.00 3.55
2174 2360 0.518636 CTCACACTTCGTTGCCATGG 59.481 55.000 7.63 7.63 0.00 3.66
2175 2361 1.511850 TCTCACACTTCGTTGCCATG 58.488 50.000 0.00 0.00 0.00 3.66
2176 2362 2.350522 GATCTCACACTTCGTTGCCAT 58.649 47.619 0.00 0.00 0.00 4.40
2177 2363 1.795768 GATCTCACACTTCGTTGCCA 58.204 50.000 0.00 0.00 0.00 4.92
2178 2364 0.716108 CGATCTCACACTTCGTTGCC 59.284 55.000 0.00 0.00 0.00 4.52
2179 2365 0.716108 CCGATCTCACACTTCGTTGC 59.284 55.000 0.00 0.00 0.00 4.17
2180 2366 1.350193 CCCGATCTCACACTTCGTTG 58.650 55.000 0.00 0.00 0.00 4.10
2181 2367 0.246635 CCCCGATCTCACACTTCGTT 59.753 55.000 0.00 0.00 0.00 3.85
2182 2368 0.898789 ACCCCGATCTCACACTTCGT 60.899 55.000 0.00 0.00 0.00 3.85
2183 2369 0.458543 CACCCCGATCTCACACTTCG 60.459 60.000 0.00 0.00 0.00 3.79
2184 2370 0.108138 CCACCCCGATCTCACACTTC 60.108 60.000 0.00 0.00 0.00 3.01
2185 2371 1.553690 CCCACCCCGATCTCACACTT 61.554 60.000 0.00 0.00 0.00 3.16
2186 2372 1.990060 CCCACCCCGATCTCACACT 60.990 63.158 0.00 0.00 0.00 3.55
2187 2373 2.584608 CCCACCCCGATCTCACAC 59.415 66.667 0.00 0.00 0.00 3.82
2188 2374 3.399181 GCCCACCCCGATCTCACA 61.399 66.667 0.00 0.00 0.00 3.58
2189 2375 3.083997 AGCCCACCCCGATCTCAC 61.084 66.667 0.00 0.00 0.00 3.51
2190 2376 3.083349 CAGCCCACCCCGATCTCA 61.083 66.667 0.00 0.00 0.00 3.27
2191 2377 3.866582 CCAGCCCACCCCGATCTC 61.867 72.222 0.00 0.00 0.00 2.75
2192 2378 4.741239 ACCAGCCCACCCCGATCT 62.741 66.667 0.00 0.00 0.00 2.75
2193 2379 4.489771 CACCAGCCCACCCCGATC 62.490 72.222 0.00 0.00 0.00 3.69
2197 2383 1.869824 TATTTCCACCAGCCCACCCC 61.870 60.000 0.00 0.00 0.00 4.95
2198 2384 0.683179 GTATTTCCACCAGCCCACCC 60.683 60.000 0.00 0.00 0.00 4.61
2199 2385 1.029947 CGTATTTCCACCAGCCCACC 61.030 60.000 0.00 0.00 0.00 4.61
2200 2386 1.654023 GCGTATTTCCACCAGCCCAC 61.654 60.000 0.00 0.00 0.00 4.61
2201 2387 1.377987 GCGTATTTCCACCAGCCCA 60.378 57.895 0.00 0.00 0.00 5.36
2202 2388 2.469516 CGCGTATTTCCACCAGCCC 61.470 63.158 0.00 0.00 0.00 5.19
2203 2389 2.469516 CCGCGTATTTCCACCAGCC 61.470 63.158 4.92 0.00 0.00 4.85
2204 2390 2.469516 CCCGCGTATTTCCACCAGC 61.470 63.158 4.92 0.00 0.00 4.85
2205 2391 1.817941 CCCCGCGTATTTCCACCAG 60.818 63.158 4.92 0.00 0.00 4.00
2206 2392 2.269562 CCCCGCGTATTTCCACCA 59.730 61.111 4.92 0.00 0.00 4.17
2207 2393 1.816679 GACCCCGCGTATTTCCACC 60.817 63.158 4.92 0.00 0.00 4.61
2208 2394 2.169146 CGACCCCGCGTATTTCCAC 61.169 63.158 4.92 0.00 0.00 4.02
2209 2395 2.184836 CGACCCCGCGTATTTCCA 59.815 61.111 4.92 0.00 0.00 3.53
2226 2412 2.279784 CTAGCTAGGCACTGCGGC 60.280 66.667 13.32 0.00 41.52 6.53
2227 2413 2.279784 GCTAGCTAGGCACTGCGG 60.280 66.667 22.10 0.00 41.52 5.69
2228 2414 2.279784 GGCTAGCTAGGCACTGCG 60.280 66.667 35.27 5.27 46.94 5.18
2234 2420 2.604991 ATCGGGGGCTAGCTAGGC 60.605 66.667 33.35 33.35 47.00 3.93
2235 2421 2.286523 CCATCGGGGGCTAGCTAGG 61.287 68.421 22.10 5.30 0.00 3.02
2236 2422 3.382111 CCATCGGGGGCTAGCTAG 58.618 66.667 16.84 16.84 0.00 3.42
2244 2430 4.820744 CAACCTGGCCATCGGGGG 62.821 72.222 15.16 10.96 46.36 5.40
2245 2431 4.820744 CCAACCTGGCCATCGGGG 62.821 72.222 15.16 11.34 46.36 5.73
2247 2433 3.704231 CTCCCAACCTGGCCATCGG 62.704 68.421 5.51 7.92 35.79 4.18
2248 2434 2.124570 CTCCCAACCTGGCCATCG 60.125 66.667 5.51 1.21 35.79 3.84
2249 2435 1.379044 CACTCCCAACCTGGCCATC 60.379 63.158 5.51 0.00 35.79 3.51
2250 2436 2.765969 CACTCCCAACCTGGCCAT 59.234 61.111 5.51 0.00 35.79 4.40
2251 2437 4.284550 GCACTCCCAACCTGGCCA 62.285 66.667 4.71 4.71 35.79 5.36
2252 2438 3.590466 ATGCACTCCCAACCTGGCC 62.590 63.158 0.00 0.00 35.79 5.36
2253 2439 2.036256 ATGCACTCCCAACCTGGC 59.964 61.111 0.00 0.00 35.79 4.85
2254 2440 1.679977 CCATGCACTCCCAACCTGG 60.680 63.158 0.00 0.00 37.25 4.45
2255 2441 1.679977 CCCATGCACTCCCAACCTG 60.680 63.158 0.00 0.00 0.00 4.00
2256 2442 2.765969 CCCATGCACTCCCAACCT 59.234 61.111 0.00 0.00 0.00 3.50
2257 2443 2.362889 CCCCATGCACTCCCAACC 60.363 66.667 0.00 0.00 0.00 3.77
2258 2444 1.978617 CACCCCATGCACTCCCAAC 60.979 63.158 0.00 0.00 0.00 3.77
2259 2445 2.017668 AACACCCCATGCACTCCCAA 62.018 55.000 0.00 0.00 0.00 4.12
2260 2446 2.468868 AACACCCCATGCACTCCCA 61.469 57.895 0.00 0.00 0.00 4.37
2261 2447 1.978617 CAACACCCCATGCACTCCC 60.979 63.158 0.00 0.00 0.00 4.30
2262 2448 1.978617 CCAACACCCCATGCACTCC 60.979 63.158 0.00 0.00 0.00 3.85
2263 2449 1.228552 ACCAACACCCCATGCACTC 60.229 57.895 0.00 0.00 0.00 3.51
2264 2450 1.531365 CACCAACACCCCATGCACT 60.531 57.895 0.00 0.00 0.00 4.40
2265 2451 1.832167 ACACCAACACCCCATGCAC 60.832 57.895 0.00 0.00 0.00 4.57
2266 2452 1.831726 CACACCAACACCCCATGCA 60.832 57.895 0.00 0.00 0.00 3.96
2267 2453 3.050339 CACACCAACACCCCATGC 58.950 61.111 0.00 0.00 0.00 4.06
2268 2454 2.573083 GGCACACCAACACCCCATG 61.573 63.158 0.00 0.00 35.26 3.66
2269 2455 2.203625 GGCACACCAACACCCCAT 60.204 61.111 0.00 0.00 35.26 4.00
2270 2456 4.885270 CGGCACACCAACACCCCA 62.885 66.667 0.00 0.00 34.57 4.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.