Multiple sequence alignment - TraesCS2D01G362200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G362200 chr2D 100.000 6229 0 0 1 6229 468127103 468133331 0.000000e+00 11503.0
1 TraesCS2D01G362200 chr2D 97.778 45 1 0 4395 4439 38095030 38095074 1.860000e-10 78.7
2 TraesCS2D01G362200 chr2B 92.947 4665 191 65 709 5305 546611277 546615871 0.000000e+00 6665.0
3 TraesCS2D01G362200 chr2B 90.334 569 44 9 5655 6220 546623667 546624227 0.000000e+00 736.0
4 TraesCS2D01G362200 chr2A 91.945 4668 250 56 677 5283 608043584 608048186 0.000000e+00 6421.0
5 TraesCS2D01G362200 chr2A 86.474 865 102 7 5287 6147 608067307 608068160 0.000000e+00 935.0
6 TraesCS2D01G362200 chr2A 91.667 84 5 2 6145 6228 608068182 608068263 1.420000e-21 115.0
7 TraesCS2D01G362200 chr2A 82.667 75 9 4 625 695 309080138 309080212 5.210000e-06 63.9
8 TraesCS2D01G362200 chr1B 76.864 523 99 15 5340 5847 418059237 418058722 6.150000e-70 276.0
9 TraesCS2D01G362200 chr1B 88.312 77 9 0 4401 4477 457755117 457755193 6.650000e-15 93.5
10 TraesCS2D01G362200 chr3A 73.190 511 113 13 5345 5846 632773321 632772826 5.000000e-36 163.0
11 TraesCS2D01G362200 chr3A 92.308 39 3 0 657 695 205485167 205485129 8.720000e-04 56.5
12 TraesCS2D01G362200 chr3A 92.500 40 1 2 657 695 591215722 591215760 8.720000e-04 56.5
13 TraesCS2D01G362200 chr1D 88.312 77 9 0 4401 4477 341838534 341838458 6.650000e-15 93.5
14 TraesCS2D01G362200 chr1D 82.192 73 9 3 627 695 322470359 322470287 6.740000e-05 60.2
15 TraesCS2D01G362200 chr1D 100.000 30 0 0 667 696 398486528 398486557 8.720000e-04 56.5
16 TraesCS2D01G362200 chr1A 88.312 77 9 0 4401 4477 441754895 441754971 6.650000e-15 93.5
17 TraesCS2D01G362200 chr4D 89.231 65 7 0 4397 4461 443521051 443521115 1.440000e-11 82.4
18 TraesCS2D01G362200 chr4B 89.231 65 7 0 4397 4461 552846197 552846261 1.440000e-11 82.4
19 TraesCS2D01G362200 chr4A 89.231 65 7 0 4397 4461 24216794 24216730 1.440000e-11 82.4
20 TraesCS2D01G362200 chr7A 91.304 46 3 1 6075 6120 146488204 146488248 1.870000e-05 62.1
21 TraesCS2D01G362200 chr7A 91.304 46 3 1 6075 6120 146540409 146540453 1.870000e-05 62.1
22 TraesCS2D01G362200 chr7A 91.304 46 3 1 6075 6120 146590429 146590473 1.870000e-05 62.1
23 TraesCS2D01G362200 chr7A 92.500 40 1 2 657 695 623047386 623047348 8.720000e-04 56.5
24 TraesCS2D01G362200 chr7A 96.875 32 1 0 668 699 89281880 89281849 3.000000e-03 54.7
25 TraesCS2D01G362200 chr7B 82.432 74 7 6 627 695 494392143 494392215 6.740000e-05 60.2
26 TraesCS2D01G362200 chr3B 100.000 30 0 0 5716 5745 18563125 18563096 8.720000e-04 56.5
27 TraesCS2D01G362200 chr5A 90.244 41 4 0 6067 6107 442698306 442698346 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G362200 chr2D 468127103 468133331 6228 False 11503 11503 100.0000 1 6229 1 chr2D.!!$F2 6228
1 TraesCS2D01G362200 chr2B 546611277 546615871 4594 False 6665 6665 92.9470 709 5305 1 chr2B.!!$F1 4596
2 TraesCS2D01G362200 chr2B 546623667 546624227 560 False 736 736 90.3340 5655 6220 1 chr2B.!!$F2 565
3 TraesCS2D01G362200 chr2A 608043584 608048186 4602 False 6421 6421 91.9450 677 5283 1 chr2A.!!$F2 4606
4 TraesCS2D01G362200 chr2A 608067307 608068263 956 False 525 935 89.0705 5287 6228 2 chr2A.!!$F3 941
5 TraesCS2D01G362200 chr1B 418058722 418059237 515 True 276 276 76.8640 5340 5847 1 chr1B.!!$R1 507

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
175 176 0.033503 TGTAGATGAGTCCGGGCTGA 60.034 55.0 16.74 4.87 0.00 4.26 F
664 665 0.101759 GCGACAACCCGTATAGCTGA 59.898 55.0 0.00 0.00 0.00 4.26 F
1331 1342 0.179103 CACGGGTGGGTTATCGTACC 60.179 60.0 0.00 0.00 37.47 3.34 F
1543 1557 0.182061 GCATCTGAATCCAGCCTCCA 59.818 55.0 0.00 0.00 40.20 3.86 F
3181 3209 0.109132 CGCCAAAAGCCTCATGGAAC 60.109 55.0 0.18 0.00 38.78 3.62 F
4103 4149 0.253044 GTCTGGCCTACCTGCATGAA 59.747 55.0 3.32 0.00 36.63 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2084 2106 0.110486 GGTGCAGGGGAAAGAACTGA 59.890 55.000 0.00 0.00 34.21 3.41 R
2086 2108 0.111253 CTGGTGCAGGGGAAAGAACT 59.889 55.000 0.00 0.00 0.00 3.01 R
3152 3180 1.335597 GGCTTTTGGCGTCCTTTGTAC 60.336 52.381 0.00 0.00 42.94 2.90 R
3355 3386 1.123077 CCTGGTGCATAGTGGCTAGA 58.877 55.000 0.00 0.00 34.04 2.43 R
4287 4333 0.102481 AGGCGCGGTGTATTACTCTG 59.898 55.000 8.83 1.19 0.00 3.35 R
5281 5382 0.389391 CGATCGGTTAGGGATGCTGT 59.611 55.000 7.38 0.00 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.855763 TGGACCTGATTTCATTTTTATGCT 57.144 33.333 0.00 0.00 0.00 3.79
24 25 6.632909 TGGACCTGATTTCATTTTTATGCTG 58.367 36.000 0.00 0.00 0.00 4.41
25 26 6.436847 TGGACCTGATTTCATTTTTATGCTGA 59.563 34.615 0.00 0.00 0.00 4.26
26 27 6.976925 GGACCTGATTTCATTTTTATGCTGAG 59.023 38.462 0.00 0.00 0.00 3.35
27 28 7.148018 GGACCTGATTTCATTTTTATGCTGAGA 60.148 37.037 0.00 0.00 0.00 3.27
28 29 7.769220 ACCTGATTTCATTTTTATGCTGAGAG 58.231 34.615 0.00 0.00 0.00 3.20
29 30 6.696148 CCTGATTTCATTTTTATGCTGAGAGC 59.304 38.462 0.00 0.00 42.82 4.09
30 31 7.400599 TGATTTCATTTTTATGCTGAGAGCT 57.599 32.000 0.00 0.00 42.97 4.09
31 32 8.510243 TGATTTCATTTTTATGCTGAGAGCTA 57.490 30.769 0.00 0.00 42.97 3.32
32 33 9.128404 TGATTTCATTTTTATGCTGAGAGCTAT 57.872 29.630 0.00 0.00 42.97 2.97
42 43 6.713762 ATGCTGAGAGCTATATAGATGTCC 57.286 41.667 19.16 8.13 42.97 4.02
43 44 5.574188 TGCTGAGAGCTATATAGATGTCCA 58.426 41.667 19.16 10.25 42.97 4.02
44 45 6.012745 TGCTGAGAGCTATATAGATGTCCAA 58.987 40.000 19.16 4.37 42.97 3.53
45 46 6.494835 TGCTGAGAGCTATATAGATGTCCAAA 59.505 38.462 19.16 5.10 42.97 3.28
46 47 7.179872 TGCTGAGAGCTATATAGATGTCCAAAT 59.820 37.037 19.16 0.00 42.97 2.32
47 48 7.492020 GCTGAGAGCTATATAGATGTCCAAATG 59.508 40.741 19.16 8.11 38.45 2.32
48 49 7.326454 TGAGAGCTATATAGATGTCCAAATGC 58.674 38.462 19.16 0.00 31.79 3.56
49 50 7.179872 TGAGAGCTATATAGATGTCCAAATGCT 59.820 37.037 19.16 3.99 31.79 3.79
50 51 7.915930 AGAGCTATATAGATGTCCAAATGCTT 58.084 34.615 14.16 0.00 0.00 3.91
51 52 8.381636 AGAGCTATATAGATGTCCAAATGCTTT 58.618 33.333 14.16 0.00 0.00 3.51
52 53 8.332996 AGCTATATAGATGTCCAAATGCTTTG 57.667 34.615 14.16 2.70 40.32 2.77
53 54 8.159447 AGCTATATAGATGTCCAAATGCTTTGA 58.841 33.333 14.16 0.00 43.26 2.69
54 55 8.786898 GCTATATAGATGTCCAAATGCTTTGAA 58.213 33.333 14.16 0.00 43.26 2.69
60 61 8.767478 AGATGTCCAAATGCTTTGAAAATTAG 57.233 30.769 9.37 0.00 43.26 1.73
61 62 6.783892 TGTCCAAATGCTTTGAAAATTAGC 57.216 33.333 9.37 0.00 43.26 3.09
63 64 6.424509 TGTCCAAATGCTTTGAAAATTAGCAG 59.575 34.615 6.08 0.00 46.86 4.24
64 65 5.933463 TCCAAATGCTTTGAAAATTAGCAGG 59.067 36.000 6.08 2.73 46.86 4.85
65 66 5.391203 CCAAATGCTTTGAAAATTAGCAGGC 60.391 40.000 6.08 4.16 46.86 4.85
66 67 4.540359 ATGCTTTGAAAATTAGCAGGCA 57.460 36.364 6.08 8.54 46.86 4.75
67 68 3.652274 TGCTTTGAAAATTAGCAGGCAC 58.348 40.909 0.00 0.00 39.79 5.01
68 69 2.995939 GCTTTGAAAATTAGCAGGCACC 59.004 45.455 0.00 0.00 35.05 5.01
69 70 3.306294 GCTTTGAAAATTAGCAGGCACCT 60.306 43.478 0.00 0.00 35.05 4.00
70 71 4.488879 CTTTGAAAATTAGCAGGCACCTC 58.511 43.478 0.00 0.00 0.00 3.85
71 72 3.153369 TGAAAATTAGCAGGCACCTCA 57.847 42.857 0.00 0.00 0.00 3.86
72 73 2.819608 TGAAAATTAGCAGGCACCTCAC 59.180 45.455 0.00 0.00 0.00 3.51
73 74 1.453155 AAATTAGCAGGCACCTCACG 58.547 50.000 0.00 0.00 0.00 4.35
74 75 1.026718 AATTAGCAGGCACCTCACGC 61.027 55.000 0.00 0.00 0.00 5.34
75 76 2.184020 ATTAGCAGGCACCTCACGCA 62.184 55.000 0.92 0.00 0.00 5.24
76 77 2.184020 TTAGCAGGCACCTCACGCAT 62.184 55.000 0.92 0.00 0.00 4.73
77 78 2.184020 TAGCAGGCACCTCACGCATT 62.184 55.000 0.92 0.00 0.00 3.56
78 79 3.044059 GCAGGCACCTCACGCATTC 62.044 63.158 0.00 0.00 0.00 2.67
79 80 1.672030 CAGGCACCTCACGCATTCA 60.672 57.895 0.00 0.00 0.00 2.57
80 81 1.376424 AGGCACCTCACGCATTCAG 60.376 57.895 0.00 0.00 0.00 3.02
81 82 1.672356 GGCACCTCACGCATTCAGT 60.672 57.895 0.00 0.00 0.00 3.41
82 83 1.639298 GGCACCTCACGCATTCAGTC 61.639 60.000 0.00 0.00 0.00 3.51
83 84 0.950555 GCACCTCACGCATTCAGTCA 60.951 55.000 0.00 0.00 0.00 3.41
84 85 1.730501 CACCTCACGCATTCAGTCAT 58.269 50.000 0.00 0.00 0.00 3.06
85 86 1.662629 CACCTCACGCATTCAGTCATC 59.337 52.381 0.00 0.00 0.00 2.92
86 87 1.552337 ACCTCACGCATTCAGTCATCT 59.448 47.619 0.00 0.00 0.00 2.90
87 88 2.027745 ACCTCACGCATTCAGTCATCTT 60.028 45.455 0.00 0.00 0.00 2.40
88 89 3.005554 CCTCACGCATTCAGTCATCTTT 58.994 45.455 0.00 0.00 0.00 2.52
89 90 3.063180 CCTCACGCATTCAGTCATCTTTC 59.937 47.826 0.00 0.00 0.00 2.62
90 91 3.930336 TCACGCATTCAGTCATCTTTCT 58.070 40.909 0.00 0.00 0.00 2.52
91 92 3.928992 TCACGCATTCAGTCATCTTTCTC 59.071 43.478 0.00 0.00 0.00 2.87
92 93 3.063180 CACGCATTCAGTCATCTTTCTCC 59.937 47.826 0.00 0.00 0.00 3.71
93 94 3.264947 CGCATTCAGTCATCTTTCTCCA 58.735 45.455 0.00 0.00 0.00 3.86
94 95 3.063180 CGCATTCAGTCATCTTTCTCCAC 59.937 47.826 0.00 0.00 0.00 4.02
95 96 4.005650 GCATTCAGTCATCTTTCTCCACA 58.994 43.478 0.00 0.00 0.00 4.17
96 97 4.456911 GCATTCAGTCATCTTTCTCCACAA 59.543 41.667 0.00 0.00 0.00 3.33
97 98 5.048504 GCATTCAGTCATCTTTCTCCACAAA 60.049 40.000 0.00 0.00 0.00 2.83
98 99 6.515531 GCATTCAGTCATCTTTCTCCACAAAA 60.516 38.462 0.00 0.00 0.00 2.44
99 100 7.428020 CATTCAGTCATCTTTCTCCACAAAAA 58.572 34.615 0.00 0.00 0.00 1.94
157 158 8.430801 TTTTTCAATTTACTGTTCATTGGGTG 57.569 30.769 10.17 0.00 0.00 4.61
158 159 6.723298 TTCAATTTACTGTTCATTGGGTGT 57.277 33.333 10.17 0.00 0.00 4.16
159 160 7.825331 TTCAATTTACTGTTCATTGGGTGTA 57.175 32.000 10.17 0.00 0.00 2.90
160 161 7.447374 TCAATTTACTGTTCATTGGGTGTAG 57.553 36.000 10.17 0.00 0.00 2.74
161 162 7.227873 TCAATTTACTGTTCATTGGGTGTAGA 58.772 34.615 10.17 0.00 0.00 2.59
162 163 7.888021 TCAATTTACTGTTCATTGGGTGTAGAT 59.112 33.333 10.17 0.00 0.00 1.98
163 164 7.630242 ATTTACTGTTCATTGGGTGTAGATG 57.370 36.000 0.00 0.00 0.00 2.90
164 165 4.908601 ACTGTTCATTGGGTGTAGATGA 57.091 40.909 0.00 0.00 0.00 2.92
165 166 4.836825 ACTGTTCATTGGGTGTAGATGAG 58.163 43.478 0.00 0.00 32.00 2.90
166 167 4.287067 ACTGTTCATTGGGTGTAGATGAGT 59.713 41.667 0.00 0.00 32.00 3.41
167 168 4.832248 TGTTCATTGGGTGTAGATGAGTC 58.168 43.478 0.00 0.00 32.00 3.36
168 169 4.192317 GTTCATTGGGTGTAGATGAGTCC 58.808 47.826 0.00 0.00 32.00 3.85
169 170 2.430694 TCATTGGGTGTAGATGAGTCCG 59.569 50.000 0.00 0.00 0.00 4.79
170 171 1.191535 TTGGGTGTAGATGAGTCCGG 58.808 55.000 0.00 0.00 0.00 5.14
171 172 0.686441 TGGGTGTAGATGAGTCCGGG 60.686 60.000 0.00 0.00 0.00 5.73
172 173 1.442148 GGTGTAGATGAGTCCGGGC 59.558 63.158 0.00 0.00 0.00 6.13
173 174 1.043673 GGTGTAGATGAGTCCGGGCT 61.044 60.000 9.26 9.26 0.00 5.19
174 175 0.103208 GTGTAGATGAGTCCGGGCTG 59.897 60.000 16.74 0.00 0.00 4.85
175 176 0.033503 TGTAGATGAGTCCGGGCTGA 60.034 55.000 16.74 4.87 0.00 4.26
176 177 0.671251 GTAGATGAGTCCGGGCTGAG 59.329 60.000 16.74 0.00 0.00 3.35
177 178 0.551396 TAGATGAGTCCGGGCTGAGA 59.449 55.000 16.74 0.00 0.00 3.27
178 179 0.324738 AGATGAGTCCGGGCTGAGAA 60.325 55.000 16.74 0.00 0.00 2.87
179 180 0.755686 GATGAGTCCGGGCTGAGAAT 59.244 55.000 16.74 0.62 0.00 2.40
180 181 1.139853 GATGAGTCCGGGCTGAGAATT 59.860 52.381 16.74 0.00 0.00 2.17
181 182 0.250234 TGAGTCCGGGCTGAGAATTG 59.750 55.000 16.74 0.00 0.00 2.32
182 183 0.462759 GAGTCCGGGCTGAGAATTGG 60.463 60.000 16.74 0.00 0.00 3.16
183 184 0.909610 AGTCCGGGCTGAGAATTGGA 60.910 55.000 8.41 0.00 0.00 3.53
184 185 0.181350 GTCCGGGCTGAGAATTGGAT 59.819 55.000 0.00 0.00 0.00 3.41
185 186 1.416401 GTCCGGGCTGAGAATTGGATA 59.584 52.381 0.00 0.00 0.00 2.59
186 187 2.039084 GTCCGGGCTGAGAATTGGATAT 59.961 50.000 0.00 0.00 0.00 1.63
187 188 2.711009 TCCGGGCTGAGAATTGGATATT 59.289 45.455 0.00 0.00 0.00 1.28
188 189 3.077359 CCGGGCTGAGAATTGGATATTC 58.923 50.000 0.00 0.00 0.00 1.75
189 190 2.738846 CGGGCTGAGAATTGGATATTCG 59.261 50.000 0.00 0.00 33.51 3.34
190 191 3.554960 CGGGCTGAGAATTGGATATTCGA 60.555 47.826 0.00 0.00 33.51 3.71
191 192 3.748568 GGGCTGAGAATTGGATATTCGAC 59.251 47.826 0.00 0.00 33.51 4.20
192 193 4.503991 GGGCTGAGAATTGGATATTCGACT 60.504 45.833 0.00 0.00 33.51 4.18
193 194 5.279506 GGGCTGAGAATTGGATATTCGACTA 60.280 44.000 0.00 0.00 33.51 2.59
194 195 5.866633 GGCTGAGAATTGGATATTCGACTAG 59.133 44.000 0.00 0.00 33.51 2.57
195 196 6.451393 GCTGAGAATTGGATATTCGACTAGT 58.549 40.000 0.00 0.00 33.51 2.57
196 197 7.309255 GGCTGAGAATTGGATATTCGACTAGTA 60.309 40.741 0.00 0.00 33.51 1.82
197 198 8.247562 GCTGAGAATTGGATATTCGACTAGTAT 58.752 37.037 0.00 0.00 33.51 2.12
198 199 9.566530 CTGAGAATTGGATATTCGACTAGTATG 57.433 37.037 0.00 0.00 33.51 2.39
199 200 8.029522 TGAGAATTGGATATTCGACTAGTATGC 58.970 37.037 0.00 0.00 33.51 3.14
200 201 7.324178 AGAATTGGATATTCGACTAGTATGCC 58.676 38.462 0.00 0.00 33.51 4.40
201 202 6.859112 ATTGGATATTCGACTAGTATGCCT 57.141 37.500 0.00 0.00 0.00 4.75
202 203 7.956328 ATTGGATATTCGACTAGTATGCCTA 57.044 36.000 0.00 0.00 0.00 3.93
203 204 6.754702 TGGATATTCGACTAGTATGCCTAC 57.245 41.667 0.00 0.00 0.00 3.18
204 205 6.482524 TGGATATTCGACTAGTATGCCTACT 58.517 40.000 6.89 6.89 41.19 2.57
205 206 7.627311 TGGATATTCGACTAGTATGCCTACTA 58.373 38.462 8.38 8.38 39.04 1.82
206 207 8.272889 TGGATATTCGACTAGTATGCCTACTAT 58.727 37.037 9.03 1.39 39.22 2.12
207 208 9.122779 GGATATTCGACTAGTATGCCTACTATT 57.877 37.037 9.03 4.35 39.22 1.73
208 209 9.938670 GATATTCGACTAGTATGCCTACTATTG 57.061 37.037 9.03 2.50 39.22 1.90
209 210 7.762588 ATTCGACTAGTATGCCTACTATTGT 57.237 36.000 9.03 5.34 39.22 2.71
210 211 8.859236 ATTCGACTAGTATGCCTACTATTGTA 57.141 34.615 9.03 0.00 39.22 2.41
211 212 8.859236 TTCGACTAGTATGCCTACTATTGTAT 57.141 34.615 9.03 0.00 39.22 2.29
212 213 8.265165 TCGACTAGTATGCCTACTATTGTATG 57.735 38.462 9.03 0.65 39.22 2.39
213 214 8.098912 TCGACTAGTATGCCTACTATTGTATGA 58.901 37.037 9.03 4.85 39.22 2.15
214 215 8.391859 CGACTAGTATGCCTACTATTGTATGAG 58.608 40.741 9.03 0.72 39.22 2.90
215 216 9.233649 GACTAGTATGCCTACTATTGTATGAGT 57.766 37.037 9.03 3.60 39.22 3.41
216 217 9.015367 ACTAGTATGCCTACTATTGTATGAGTG 57.985 37.037 9.03 0.00 39.22 3.51
217 218 7.233389 AGTATGCCTACTATTGTATGAGTGG 57.767 40.000 0.00 0.00 36.40 4.00
218 219 7.010771 AGTATGCCTACTATTGTATGAGTGGA 58.989 38.462 0.00 0.00 36.40 4.02
219 220 5.531122 TGCCTACTATTGTATGAGTGGAC 57.469 43.478 0.00 0.00 0.00 4.02
220 221 5.208890 TGCCTACTATTGTATGAGTGGACT 58.791 41.667 0.00 0.00 0.00 3.85
221 222 6.370453 TGCCTACTATTGTATGAGTGGACTA 58.630 40.000 0.00 0.00 0.00 2.59
222 223 7.010771 TGCCTACTATTGTATGAGTGGACTAT 58.989 38.462 0.00 0.00 0.00 2.12
223 224 7.176865 TGCCTACTATTGTATGAGTGGACTATC 59.823 40.741 0.00 0.00 0.00 2.08
224 225 7.176865 GCCTACTATTGTATGAGTGGACTATCA 59.823 40.741 0.00 0.00 0.00 2.15
225 226 8.735315 CCTACTATTGTATGAGTGGACTATCAG 58.265 40.741 0.00 0.00 0.00 2.90
226 227 7.531857 ACTATTGTATGAGTGGACTATCAGG 57.468 40.000 0.00 0.00 0.00 3.86
227 228 7.069986 ACTATTGTATGAGTGGACTATCAGGT 58.930 38.462 0.00 0.00 0.00 4.00
228 229 5.598416 TTGTATGAGTGGACTATCAGGTG 57.402 43.478 0.00 0.00 0.00 4.00
229 230 4.867086 TGTATGAGTGGACTATCAGGTGA 58.133 43.478 0.00 0.00 0.00 4.02
230 231 5.269189 TGTATGAGTGGACTATCAGGTGAA 58.731 41.667 0.00 0.00 0.00 3.18
231 232 5.899547 TGTATGAGTGGACTATCAGGTGAAT 59.100 40.000 0.00 0.00 0.00 2.57
232 233 4.743057 TGAGTGGACTATCAGGTGAATG 57.257 45.455 0.00 0.00 0.00 2.67
233 234 4.352893 TGAGTGGACTATCAGGTGAATGA 58.647 43.478 0.00 0.00 0.00 2.57
234 235 4.777366 TGAGTGGACTATCAGGTGAATGAA 59.223 41.667 0.00 0.00 31.76 2.57
235 236 5.105187 TGAGTGGACTATCAGGTGAATGAAG 60.105 44.000 0.00 0.00 31.76 3.02
236 237 3.873952 GTGGACTATCAGGTGAATGAAGC 59.126 47.826 0.00 0.00 31.76 3.86
237 238 3.126831 GGACTATCAGGTGAATGAAGCG 58.873 50.000 0.00 0.00 31.76 4.68
238 239 3.430929 GGACTATCAGGTGAATGAAGCGT 60.431 47.826 0.00 0.00 31.76 5.07
239 240 4.184629 GACTATCAGGTGAATGAAGCGTT 58.815 43.478 0.00 0.00 31.76 4.84
240 241 4.579869 ACTATCAGGTGAATGAAGCGTTT 58.420 39.130 0.00 0.00 31.76 3.60
241 242 3.837213 ATCAGGTGAATGAAGCGTTTG 57.163 42.857 0.00 0.00 31.76 2.93
242 243 1.879380 TCAGGTGAATGAAGCGTTTGG 59.121 47.619 0.00 0.00 0.00 3.28
243 244 1.879380 CAGGTGAATGAAGCGTTTGGA 59.121 47.619 0.00 0.00 0.00 3.53
244 245 2.095567 CAGGTGAATGAAGCGTTTGGAG 60.096 50.000 0.00 0.00 0.00 3.86
245 246 1.401539 GGTGAATGAAGCGTTTGGAGC 60.402 52.381 0.00 0.00 0.00 4.70
247 248 1.806542 TGAATGAAGCGTTTGGAGCTC 59.193 47.619 4.71 4.71 45.31 4.09
248 249 1.806542 GAATGAAGCGTTTGGAGCTCA 59.193 47.619 17.19 0.00 45.31 4.26
249 250 1.446907 ATGAAGCGTTTGGAGCTCAG 58.553 50.000 17.19 2.13 45.31 3.35
250 251 1.230635 TGAAGCGTTTGGAGCTCAGC 61.231 55.000 17.19 12.05 45.31 4.26
251 252 1.916697 GAAGCGTTTGGAGCTCAGCC 61.917 60.000 17.19 0.00 45.31 4.85
252 253 2.669569 GCGTTTGGAGCTCAGCCA 60.670 61.111 17.19 1.55 0.00 4.75
253 254 2.042831 GCGTTTGGAGCTCAGCCAT 61.043 57.895 17.19 0.00 34.90 4.40
254 255 1.986575 GCGTTTGGAGCTCAGCCATC 61.987 60.000 17.19 0.00 34.90 3.51
255 256 0.674581 CGTTTGGAGCTCAGCCATCA 60.675 55.000 17.19 0.00 34.90 3.07
256 257 1.760192 GTTTGGAGCTCAGCCATCAT 58.240 50.000 17.19 0.00 34.90 2.45
257 258 1.404391 GTTTGGAGCTCAGCCATCATG 59.596 52.381 17.19 0.00 34.90 3.07
258 259 0.106868 TTGGAGCTCAGCCATCATGG 60.107 55.000 17.19 0.00 41.55 3.66
259 260 0.984432 TGGAGCTCAGCCATCATGGA 60.984 55.000 17.19 0.00 40.96 3.41
260 261 0.182061 GGAGCTCAGCCATCATGGAA 59.818 55.000 17.19 0.00 40.96 3.53
261 262 1.202903 GGAGCTCAGCCATCATGGAAT 60.203 52.381 17.19 0.00 40.96 3.01
262 263 2.039480 GGAGCTCAGCCATCATGGAATA 59.961 50.000 17.19 0.00 40.96 1.75
263 264 3.072944 GAGCTCAGCCATCATGGAATAC 58.927 50.000 8.30 0.00 40.96 1.89
264 265 2.440627 AGCTCAGCCATCATGGAATACA 59.559 45.455 8.30 0.00 40.96 2.29
265 266 3.074094 AGCTCAGCCATCATGGAATACAT 59.926 43.478 8.30 0.00 40.96 2.29
340 341 7.759489 AAAAAGATGCACAAGTATACAAGGA 57.241 32.000 5.50 0.00 0.00 3.36
341 342 7.944729 AAAAGATGCACAAGTATACAAGGAT 57.055 32.000 5.50 0.00 0.00 3.24
342 343 6.932356 AAGATGCACAAGTATACAAGGATG 57.068 37.500 5.50 0.00 0.00 3.51
343 344 5.994250 AGATGCACAAGTATACAAGGATGT 58.006 37.500 5.50 0.00 43.74 3.06
344 345 5.819379 AGATGCACAAGTATACAAGGATGTG 59.181 40.000 5.50 12.04 40.84 3.21
345 346 4.905429 TGCACAAGTATACAAGGATGTGT 58.095 39.130 18.39 5.67 40.84 3.72
346 347 6.043854 TGCACAAGTATACAAGGATGTGTA 57.956 37.500 18.39 14.50 40.84 2.90
347 348 6.649155 TGCACAAGTATACAAGGATGTGTAT 58.351 36.000 18.39 3.56 44.84 2.29
348 349 6.538381 TGCACAAGTATACAAGGATGTGTATG 59.462 38.462 18.39 0.00 43.11 2.39
349 350 6.511767 GCACAAGTATACAAGGATGTGTATGC 60.512 42.308 18.39 6.69 43.11 3.14
350 351 6.538381 CACAAGTATACAAGGATGTGTATGCA 59.462 38.462 5.50 0.00 44.75 3.96
351 352 7.227314 CACAAGTATACAAGGATGTGTATGCAT 59.773 37.037 3.79 3.79 44.75 3.96
352 353 7.227314 ACAAGTATACAAGGATGTGTATGCATG 59.773 37.037 10.16 13.45 44.75 4.06
353 354 6.830912 AGTATACAAGGATGTGTATGCATGT 58.169 36.000 10.16 0.00 44.75 3.21
354 355 7.962441 AGTATACAAGGATGTGTATGCATGTA 58.038 34.615 10.16 0.30 44.75 2.29
355 356 8.428852 AGTATACAAGGATGTGTATGCATGTAA 58.571 33.333 10.16 0.00 44.75 2.41
356 357 9.051679 GTATACAAGGATGTGTATGCATGTAAA 57.948 33.333 10.16 0.00 43.11 2.01
357 358 6.832520 ACAAGGATGTGTATGCATGTAAAA 57.167 33.333 10.16 0.00 35.29 1.52
358 359 7.408756 ACAAGGATGTGTATGCATGTAAAAT 57.591 32.000 10.16 0.00 35.29 1.82
359 360 7.259882 ACAAGGATGTGTATGCATGTAAAATG 58.740 34.615 10.16 0.44 35.29 2.32
360 361 7.093814 ACAAGGATGTGTATGCATGTAAAATGT 60.094 33.333 10.16 1.06 35.29 2.71
361 362 7.031226 AGGATGTGTATGCATGTAAAATGTC 57.969 36.000 10.16 0.00 0.00 3.06
362 363 6.602803 AGGATGTGTATGCATGTAAAATGTCA 59.397 34.615 10.16 0.00 0.00 3.58
363 364 6.914215 GGATGTGTATGCATGTAAAATGTCAG 59.086 38.462 10.16 0.00 0.00 3.51
364 365 6.193514 TGTGTATGCATGTAAAATGTCAGG 57.806 37.500 10.16 0.00 0.00 3.86
365 366 5.942826 TGTGTATGCATGTAAAATGTCAGGA 59.057 36.000 10.16 0.00 0.00 3.86
366 367 6.602803 TGTGTATGCATGTAAAATGTCAGGAT 59.397 34.615 10.16 0.00 0.00 3.24
367 368 6.914215 GTGTATGCATGTAAAATGTCAGGATG 59.086 38.462 10.16 0.00 37.54 3.51
383 384 6.455360 TCAGGATGAAATACCTTCAAATGC 57.545 37.500 0.00 0.00 45.97 3.56
384 385 5.360714 TCAGGATGAAATACCTTCAAATGCC 59.639 40.000 0.00 0.00 45.97 4.40
385 386 7.032401 TCAGGATGAAATACCTTCAAATGCCA 61.032 38.462 0.00 0.00 45.97 4.92
386 387 8.295085 TCAGGATGAAATACCTTCAAATGCCAT 61.295 37.037 0.00 0.00 45.97 4.40
389 390 6.211587 TGAAATACCTTCAAATGCCATCTG 57.788 37.500 0.00 0.00 41.21 2.90
390 391 5.716228 TGAAATACCTTCAAATGCCATCTGT 59.284 36.000 0.00 0.00 41.21 3.41
391 392 5.587388 AATACCTTCAAATGCCATCTGTG 57.413 39.130 0.00 0.00 0.00 3.66
392 393 1.547372 ACCTTCAAATGCCATCTGTGC 59.453 47.619 0.00 0.00 0.00 4.57
393 394 1.546923 CCTTCAAATGCCATCTGTGCA 59.453 47.619 0.00 0.00 43.97 4.57
394 395 2.028839 CCTTCAAATGCCATCTGTGCAA 60.029 45.455 0.00 0.00 42.92 4.08
395 396 3.555377 CCTTCAAATGCCATCTGTGCAAA 60.555 43.478 0.00 0.00 42.92 3.68
396 397 3.747854 TCAAATGCCATCTGTGCAAAA 57.252 38.095 0.00 0.00 42.92 2.44
397 398 4.274602 TCAAATGCCATCTGTGCAAAAT 57.725 36.364 0.00 0.00 42.92 1.82
398 399 5.402997 TCAAATGCCATCTGTGCAAAATA 57.597 34.783 0.00 0.00 42.92 1.40
399 400 5.791666 TCAAATGCCATCTGTGCAAAATAA 58.208 33.333 0.00 0.00 42.92 1.40
400 401 6.228995 TCAAATGCCATCTGTGCAAAATAAA 58.771 32.000 0.00 0.00 42.92 1.40
401 402 6.709397 TCAAATGCCATCTGTGCAAAATAAAA 59.291 30.769 0.00 0.00 42.92 1.52
402 403 7.390996 TCAAATGCCATCTGTGCAAAATAAAAT 59.609 29.630 0.00 0.00 42.92 1.82
403 404 8.666573 CAAATGCCATCTGTGCAAAATAAAATA 58.333 29.630 0.00 0.00 42.92 1.40
404 405 8.789825 AATGCCATCTGTGCAAAATAAAATAA 57.210 26.923 0.00 0.00 42.92 1.40
405 406 8.789825 ATGCCATCTGTGCAAAATAAAATAAA 57.210 26.923 0.00 0.00 42.92 1.40
406 407 8.613060 TGCCATCTGTGCAAAATAAAATAAAA 57.387 26.923 0.00 0.00 35.40 1.52
407 408 9.228949 TGCCATCTGTGCAAAATAAAATAAAAT 57.771 25.926 0.00 0.00 35.40 1.82
422 423 9.904198 ATAAAATAAAATTCATGGACTTTGGGG 57.096 29.630 0.00 0.00 0.00 4.96
423 424 7.566658 AAATAAAATTCATGGACTTTGGGGA 57.433 32.000 0.00 0.00 0.00 4.81
424 425 7.754091 AATAAAATTCATGGACTTTGGGGAT 57.246 32.000 0.00 0.00 0.00 3.85
425 426 5.425196 AAAATTCATGGACTTTGGGGATG 57.575 39.130 0.00 0.00 0.00 3.51
426 427 4.335735 AATTCATGGACTTTGGGGATGA 57.664 40.909 0.00 0.00 0.00 2.92
427 428 3.824001 TTCATGGACTTTGGGGATGAA 57.176 42.857 0.00 0.00 32.06 2.57
428 429 3.085952 TCATGGACTTTGGGGATGAAC 57.914 47.619 0.00 0.00 0.00 3.18
429 430 2.378208 TCATGGACTTTGGGGATGAACA 59.622 45.455 0.00 0.00 0.00 3.18
430 431 2.584835 TGGACTTTGGGGATGAACAG 57.415 50.000 0.00 0.00 0.00 3.16
431 432 1.780309 TGGACTTTGGGGATGAACAGT 59.220 47.619 0.00 0.00 0.00 3.55
432 433 2.983192 TGGACTTTGGGGATGAACAGTA 59.017 45.455 0.00 0.00 0.00 2.74
433 434 3.591527 TGGACTTTGGGGATGAACAGTAT 59.408 43.478 0.00 0.00 0.00 2.12
434 435 4.200092 GGACTTTGGGGATGAACAGTATC 58.800 47.826 0.00 0.00 0.00 2.24
435 436 4.324254 GGACTTTGGGGATGAACAGTATCA 60.324 45.833 0.00 0.00 0.00 2.15
436 437 5.440610 GACTTTGGGGATGAACAGTATCAT 58.559 41.667 0.00 0.00 42.62 2.45
437 438 5.195940 ACTTTGGGGATGAACAGTATCATG 58.804 41.667 0.00 0.00 40.08 3.07
438 439 3.213206 TGGGGATGAACAGTATCATGC 57.787 47.619 0.77 0.77 44.62 4.06
439 440 2.146342 GGGGATGAACAGTATCATGCG 58.854 52.381 3.29 0.00 45.83 4.73
440 441 1.532868 GGGATGAACAGTATCATGCGC 59.467 52.381 0.00 0.00 45.83 6.09
441 442 2.487934 GGATGAACAGTATCATGCGCT 58.512 47.619 9.73 0.00 40.08 5.92
442 443 3.554960 GGGATGAACAGTATCATGCGCTA 60.555 47.826 9.73 0.00 45.83 4.26
443 444 3.677121 GGATGAACAGTATCATGCGCTAG 59.323 47.826 9.73 0.14 40.08 3.42
444 445 4.550422 GATGAACAGTATCATGCGCTAGA 58.450 43.478 9.73 6.92 40.08 2.43
445 446 4.385358 TGAACAGTATCATGCGCTAGAA 57.615 40.909 9.73 0.00 0.00 2.10
446 447 4.363138 TGAACAGTATCATGCGCTAGAAG 58.637 43.478 9.73 1.67 0.00 2.85
447 448 2.748605 ACAGTATCATGCGCTAGAAGC 58.251 47.619 9.73 0.00 38.02 3.86
448 449 2.064762 CAGTATCATGCGCTAGAAGCC 58.935 52.381 9.73 0.00 38.18 4.35
449 450 1.688735 AGTATCATGCGCTAGAAGCCA 59.311 47.619 9.73 0.00 38.18 4.75
450 451 1.795286 GTATCATGCGCTAGAAGCCAC 59.205 52.381 9.73 0.83 38.18 5.01
451 452 0.178767 ATCATGCGCTAGAAGCCACA 59.821 50.000 9.73 0.00 38.18 4.17
452 453 0.460811 TCATGCGCTAGAAGCCACAG 60.461 55.000 9.73 0.00 38.18 3.66
453 454 0.460811 CATGCGCTAGAAGCCACAGA 60.461 55.000 9.73 0.00 38.18 3.41
454 455 0.467384 ATGCGCTAGAAGCCACAGAT 59.533 50.000 9.73 0.00 38.18 2.90
455 456 0.250234 TGCGCTAGAAGCCACAGATT 59.750 50.000 9.73 0.00 38.18 2.40
456 457 1.480545 TGCGCTAGAAGCCACAGATTA 59.519 47.619 9.73 0.00 38.18 1.75
457 458 2.131183 GCGCTAGAAGCCACAGATTAG 58.869 52.381 0.00 0.00 38.18 1.73
458 459 2.131183 CGCTAGAAGCCACAGATTAGC 58.869 52.381 0.00 0.00 38.18 3.09
459 460 2.223923 CGCTAGAAGCCACAGATTAGCT 60.224 50.000 0.00 0.00 38.18 3.32
461 462 4.195416 GCTAGAAGCCACAGATTAGCTTT 58.805 43.478 0.00 0.00 46.44 3.51
462 463 4.637977 GCTAGAAGCCACAGATTAGCTTTT 59.362 41.667 0.00 0.00 46.44 2.27
463 464 5.124617 GCTAGAAGCCACAGATTAGCTTTTT 59.875 40.000 0.00 0.00 46.44 1.94
482 483 3.810310 TTTTTCGCACAACCCTCATTT 57.190 38.095 0.00 0.00 0.00 2.32
483 484 2.791383 TTTCGCACAACCCTCATTTG 57.209 45.000 0.00 0.00 0.00 2.32
484 485 1.974265 TTCGCACAACCCTCATTTGA 58.026 45.000 0.00 0.00 0.00 2.69
485 486 1.974265 TCGCACAACCCTCATTTGAA 58.026 45.000 0.00 0.00 0.00 2.69
486 487 1.606668 TCGCACAACCCTCATTTGAAC 59.393 47.619 0.00 0.00 0.00 3.18
487 488 1.336440 CGCACAACCCTCATTTGAACA 59.664 47.619 0.00 0.00 0.00 3.18
488 489 2.605338 CGCACAACCCTCATTTGAACAG 60.605 50.000 0.00 0.00 0.00 3.16
489 490 2.622942 GCACAACCCTCATTTGAACAGA 59.377 45.455 0.00 0.00 0.00 3.41
490 491 3.256631 GCACAACCCTCATTTGAACAGAT 59.743 43.478 0.00 0.00 0.00 2.90
491 492 4.262164 GCACAACCCTCATTTGAACAGATT 60.262 41.667 0.00 0.00 0.00 2.40
492 493 5.739935 GCACAACCCTCATTTGAACAGATTT 60.740 40.000 0.00 0.00 0.00 2.17
493 494 5.922544 CACAACCCTCATTTGAACAGATTTC 59.077 40.000 0.00 0.00 0.00 2.17
494 495 5.156355 CAACCCTCATTTGAACAGATTTCG 58.844 41.667 0.00 0.00 0.00 3.46
495 496 4.398319 ACCCTCATTTGAACAGATTTCGT 58.602 39.130 0.00 0.00 0.00 3.85
496 497 4.455877 ACCCTCATTTGAACAGATTTCGTC 59.544 41.667 0.00 0.00 0.00 4.20
497 498 4.142600 CCCTCATTTGAACAGATTTCGTCC 60.143 45.833 0.00 0.00 0.00 4.79
498 499 4.697352 CCTCATTTGAACAGATTTCGTCCT 59.303 41.667 0.00 0.00 0.00 3.85
499 500 5.874810 CCTCATTTGAACAGATTTCGTCCTA 59.125 40.000 0.00 0.00 0.00 2.94
500 501 6.371548 CCTCATTTGAACAGATTTCGTCCTAA 59.628 38.462 0.00 0.00 0.00 2.69
501 502 7.094805 CCTCATTTGAACAGATTTCGTCCTAAA 60.095 37.037 0.00 0.00 0.00 1.85
502 503 8.160521 TCATTTGAACAGATTTCGTCCTAAAA 57.839 30.769 0.00 0.00 0.00 1.52
503 504 8.625651 TCATTTGAACAGATTTCGTCCTAAAAA 58.374 29.630 0.00 0.00 0.00 1.94
529 530 1.453155 CACACCTGTGTTATGCCTCC 58.547 55.000 0.00 0.00 42.83 4.30
530 531 1.064003 ACACCTGTGTTATGCCTCCA 58.936 50.000 0.00 0.00 41.83 3.86
531 532 1.635487 ACACCTGTGTTATGCCTCCAT 59.365 47.619 0.00 0.00 41.83 3.41
532 533 2.019249 CACCTGTGTTATGCCTCCATG 58.981 52.381 0.00 0.00 32.85 3.66
533 534 1.635487 ACCTGTGTTATGCCTCCATGT 59.365 47.619 0.00 0.00 32.85 3.21
534 535 2.843730 ACCTGTGTTATGCCTCCATGTA 59.156 45.455 0.00 0.00 32.85 2.29
535 536 3.118261 ACCTGTGTTATGCCTCCATGTAG 60.118 47.826 0.00 0.00 32.85 2.74
536 537 3.134623 CCTGTGTTATGCCTCCATGTAGA 59.865 47.826 0.00 0.00 32.85 2.59
537 538 4.202398 CCTGTGTTATGCCTCCATGTAGAT 60.202 45.833 0.00 0.00 32.85 1.98
538 539 5.371526 CTGTGTTATGCCTCCATGTAGATT 58.628 41.667 0.00 0.00 32.85 2.40
539 540 5.754782 TGTGTTATGCCTCCATGTAGATTT 58.245 37.500 0.00 0.00 32.85 2.17
540 541 5.589855 TGTGTTATGCCTCCATGTAGATTTG 59.410 40.000 0.00 0.00 32.85 2.32
541 542 5.590259 GTGTTATGCCTCCATGTAGATTTGT 59.410 40.000 0.00 0.00 32.85 2.83
542 543 6.765989 GTGTTATGCCTCCATGTAGATTTGTA 59.234 38.462 0.00 0.00 32.85 2.41
543 544 7.445402 GTGTTATGCCTCCATGTAGATTTGTAT 59.555 37.037 0.00 0.00 32.85 2.29
544 545 7.998383 TGTTATGCCTCCATGTAGATTTGTATT 59.002 33.333 0.00 0.00 32.85 1.89
545 546 8.850156 GTTATGCCTCCATGTAGATTTGTATTT 58.150 33.333 0.00 0.00 32.85 1.40
546 547 7.902920 ATGCCTCCATGTAGATTTGTATTTT 57.097 32.000 0.00 0.00 0.00 1.82
547 548 7.716799 TGCCTCCATGTAGATTTGTATTTTT 57.283 32.000 0.00 0.00 0.00 1.94
624 625 9.548208 TTTTAAAACCTTCAAAAGCAATTTTCG 57.452 25.926 0.00 0.00 0.00 3.46
625 626 6.735678 AAAACCTTCAAAAGCAATTTTCGT 57.264 29.167 0.00 0.00 0.00 3.85
626 627 6.735678 AAACCTTCAAAAGCAATTTTCGTT 57.264 29.167 0.00 0.00 0.00 3.85
627 628 7.835634 AAACCTTCAAAAGCAATTTTCGTTA 57.164 28.000 0.00 0.00 0.00 3.18
628 629 8.432110 AAACCTTCAAAAGCAATTTTCGTTAT 57.568 26.923 0.00 0.00 0.00 1.89
629 630 8.432110 AACCTTCAAAAGCAATTTTCGTTATT 57.568 26.923 0.00 0.00 0.00 1.40
630 631 9.535878 AACCTTCAAAAGCAATTTTCGTTATTA 57.464 25.926 0.00 0.00 0.00 0.98
631 632 9.191995 ACCTTCAAAAGCAATTTTCGTTATTAG 57.808 29.630 0.00 0.00 0.00 1.73
632 633 8.647226 CCTTCAAAAGCAATTTTCGTTATTAGG 58.353 33.333 0.00 0.00 0.00 2.69
633 634 9.191995 CTTCAAAAGCAATTTTCGTTATTAGGT 57.808 29.630 0.00 0.00 0.00 3.08
634 635 9.535878 TTCAAAAGCAATTTTCGTTATTAGGTT 57.464 25.926 0.00 0.00 0.00 3.50
635 636 8.973378 TCAAAAGCAATTTTCGTTATTAGGTTG 58.027 29.630 0.00 0.00 0.00 3.77
636 637 7.883229 AAAGCAATTTTCGTTATTAGGTTGG 57.117 32.000 0.00 0.00 0.00 3.77
637 638 5.407502 AGCAATTTTCGTTATTAGGTTGGC 58.592 37.500 0.00 0.00 0.00 4.52
638 639 5.185056 AGCAATTTTCGTTATTAGGTTGGCT 59.815 36.000 0.00 0.00 0.00 4.75
639 640 6.376018 AGCAATTTTCGTTATTAGGTTGGCTA 59.624 34.615 0.00 0.00 0.00 3.93
640 641 7.068226 AGCAATTTTCGTTATTAGGTTGGCTAT 59.932 33.333 0.00 0.00 0.00 2.97
641 642 8.347035 GCAATTTTCGTTATTAGGTTGGCTATA 58.653 33.333 0.00 0.00 0.00 1.31
644 645 9.623000 ATTTTCGTTATTAGGTTGGCTATAAGT 57.377 29.630 0.00 0.00 0.00 2.24
645 646 8.428186 TTTCGTTATTAGGTTGGCTATAAGTG 57.572 34.615 0.00 0.00 0.00 3.16
646 647 5.987347 TCGTTATTAGGTTGGCTATAAGTGC 59.013 40.000 0.00 0.00 0.00 4.40
647 648 5.107607 CGTTATTAGGTTGGCTATAAGTGCG 60.108 44.000 0.00 0.00 0.00 5.34
648 649 4.682778 ATTAGGTTGGCTATAAGTGCGA 57.317 40.909 0.00 0.00 0.00 5.10
649 650 2.311124 AGGTTGGCTATAAGTGCGAC 57.689 50.000 0.00 0.00 0.00 5.19
650 651 1.553248 AGGTTGGCTATAAGTGCGACA 59.447 47.619 0.00 0.00 0.00 4.35
651 652 2.027561 AGGTTGGCTATAAGTGCGACAA 60.028 45.455 0.00 0.00 0.00 3.18
652 653 2.095372 GGTTGGCTATAAGTGCGACAAC 59.905 50.000 0.00 0.00 34.32 3.32
653 654 2.018542 TGGCTATAAGTGCGACAACC 57.981 50.000 0.00 0.00 0.00 3.77
654 655 1.296727 GGCTATAAGTGCGACAACCC 58.703 55.000 0.00 0.00 0.00 4.11
655 656 0.928229 GCTATAAGTGCGACAACCCG 59.072 55.000 0.00 0.00 0.00 5.28
656 657 1.738030 GCTATAAGTGCGACAACCCGT 60.738 52.381 0.00 0.00 0.00 5.28
657 658 2.480073 GCTATAAGTGCGACAACCCGTA 60.480 50.000 0.00 0.00 0.00 4.02
658 659 2.973694 ATAAGTGCGACAACCCGTAT 57.026 45.000 0.00 0.00 0.00 3.06
659 660 4.557296 GCTATAAGTGCGACAACCCGTATA 60.557 45.833 0.00 0.00 0.00 1.47
660 661 2.288961 AAGTGCGACAACCCGTATAG 57.711 50.000 0.00 0.00 0.00 1.31
661 662 0.179119 AGTGCGACAACCCGTATAGC 60.179 55.000 0.00 0.00 0.00 2.97
662 663 0.179119 GTGCGACAACCCGTATAGCT 60.179 55.000 0.00 0.00 0.00 3.32
663 664 0.179121 TGCGACAACCCGTATAGCTG 60.179 55.000 0.00 0.00 0.00 4.24
664 665 0.101759 GCGACAACCCGTATAGCTGA 59.898 55.000 0.00 0.00 0.00 4.26
665 666 1.836383 CGACAACCCGTATAGCTGAC 58.164 55.000 0.00 0.00 0.00 3.51
666 667 1.404391 CGACAACCCGTATAGCTGACT 59.596 52.381 0.00 0.00 0.00 3.41
667 668 2.794981 CGACAACCCGTATAGCTGACTG 60.795 54.545 0.00 0.00 0.00 3.51
668 669 2.165845 GACAACCCGTATAGCTGACTGT 59.834 50.000 0.00 0.00 0.00 3.55
669 670 2.565834 ACAACCCGTATAGCTGACTGTT 59.434 45.455 0.00 0.00 0.00 3.16
670 671 2.930040 CAACCCGTATAGCTGACTGTTG 59.070 50.000 0.00 7.35 0.00 3.33
671 672 1.480954 ACCCGTATAGCTGACTGTTGG 59.519 52.381 0.00 0.00 0.00 3.77
672 673 1.480954 CCCGTATAGCTGACTGTTGGT 59.519 52.381 0.00 0.00 0.00 3.67
673 674 2.093658 CCCGTATAGCTGACTGTTGGTT 60.094 50.000 0.00 0.00 0.00 3.67
674 675 3.131577 CCCGTATAGCTGACTGTTGGTTA 59.868 47.826 0.00 0.00 0.00 2.85
675 676 4.202223 CCCGTATAGCTGACTGTTGGTTAT 60.202 45.833 0.00 0.00 0.00 1.89
676 677 5.010314 CCCGTATAGCTGACTGTTGGTTATA 59.990 44.000 0.00 0.00 0.00 0.98
677 678 5.919141 CCGTATAGCTGACTGTTGGTTATAC 59.081 44.000 0.00 12.87 0.00 1.47
678 679 6.238953 CCGTATAGCTGACTGTTGGTTATACT 60.239 42.308 16.86 0.00 31.86 2.12
679 680 7.040892 CCGTATAGCTGACTGTTGGTTATACTA 60.041 40.741 16.86 0.00 31.86 1.82
680 681 8.512956 CGTATAGCTGACTGTTGGTTATACTAT 58.487 37.037 16.86 0.00 31.86 2.12
707 708 4.392445 CCATGCTCTAATAATGCAGCTCTC 59.608 45.833 0.00 0.00 40.18 3.20
710 711 3.745458 GCTCTAATAATGCAGCTCTCACC 59.255 47.826 0.00 0.00 0.00 4.02
717 718 1.593750 GCAGCTCTCACCATAGCCG 60.594 63.158 0.00 0.00 39.64 5.52
756 757 6.751514 TCTGGCGCAAGATAGAAAATTTAA 57.248 33.333 11.41 0.00 43.02 1.52
793 799 8.654230 AGCATTGTGTCAATAGTCAATAGTAG 57.346 34.615 0.00 0.00 0.00 2.57
1048 1056 2.271944 ACCAAAAAGACCCGAGAAGG 57.728 50.000 0.00 0.00 40.63 3.46
1057 1065 1.215679 ACCCGAGAAGGAGGAGGAGA 61.216 60.000 0.00 0.00 45.00 3.71
1269 1280 2.296471 CGCTCTCCTCCGTTTATGGTAT 59.704 50.000 0.00 0.00 0.00 2.73
1274 1285 5.202765 TCTCCTCCGTTTATGGTATGTACA 58.797 41.667 0.00 0.00 0.00 2.90
1321 1332 2.203280 TGTTCTTGCACGGGTGGG 60.203 61.111 0.43 0.00 0.00 4.61
1327 1338 1.366111 CTTGCACGGGTGGGTTATCG 61.366 60.000 0.43 0.00 0.00 2.92
1331 1342 0.179103 CACGGGTGGGTTATCGTACC 60.179 60.000 0.00 0.00 37.47 3.34
1344 1355 6.376299 GGGTTATCGTACCTTTTCTTGGATTT 59.624 38.462 0.00 0.00 38.30 2.17
1521 1535 2.796651 CTCCTGCGATTTGCCTGC 59.203 61.111 0.00 0.00 45.60 4.85
1538 1552 2.630317 CGCGCATCTGAATCCAGC 59.370 61.111 8.75 0.00 40.20 4.85
1540 1554 1.525535 GCGCATCTGAATCCAGCCT 60.526 57.895 0.30 0.00 40.20 4.58
1541 1555 1.505477 GCGCATCTGAATCCAGCCTC 61.505 60.000 0.30 0.00 40.20 4.70
1542 1556 0.883814 CGCATCTGAATCCAGCCTCC 60.884 60.000 0.00 0.00 40.20 4.30
1543 1557 0.182061 GCATCTGAATCCAGCCTCCA 59.818 55.000 0.00 0.00 40.20 3.86
1544 1558 1.814634 GCATCTGAATCCAGCCTCCAG 60.815 57.143 0.00 0.00 40.20 3.86
1545 1559 1.138568 ATCTGAATCCAGCCTCCAGG 58.861 55.000 0.00 0.00 40.20 4.45
1546 1560 0.252881 TCTGAATCCAGCCTCCAGGT 60.253 55.000 0.00 0.00 40.20 4.00
1587 1601 2.726351 CCGTCTCCTGCCTCCTTCC 61.726 68.421 0.00 0.00 0.00 3.46
1588 1602 1.684049 CGTCTCCTGCCTCCTTCCT 60.684 63.158 0.00 0.00 0.00 3.36
1589 1603 1.671901 CGTCTCCTGCCTCCTTCCTC 61.672 65.000 0.00 0.00 0.00 3.71
1660 1677 3.296322 TCGATGCAAATTTGTGGTTCC 57.704 42.857 19.03 2.48 0.00 3.62
1692 1709 4.060038 GCGGTGCCAGCAAGCATT 62.060 61.111 14.13 0.00 46.24 3.56
1823 1844 1.278238 CGGCATCCACTCGACTTTAC 58.722 55.000 0.00 0.00 0.00 2.01
1939 1960 9.492973 AATGCAAGTTTTGTATTATCTGCTTTT 57.507 25.926 0.00 0.00 42.84 2.27
1950 1971 9.672086 TGTATTATCTGCTTTTGTGTTTGTAAC 57.328 29.630 0.00 0.00 0.00 2.50
1953 1974 9.816354 ATTATCTGCTTTTGTGTTTGTAACTTT 57.184 25.926 0.00 0.00 0.00 2.66
1954 1975 6.942886 TCTGCTTTTGTGTTTGTAACTTTG 57.057 33.333 0.00 0.00 0.00 2.77
1956 1977 7.594714 TCTGCTTTTGTGTTTGTAACTTTGTA 58.405 30.769 0.00 0.00 0.00 2.41
1957 1978 8.247562 TCTGCTTTTGTGTTTGTAACTTTGTAT 58.752 29.630 0.00 0.00 0.00 2.29
1958 1979 9.509855 CTGCTTTTGTGTTTGTAACTTTGTATA 57.490 29.630 0.00 0.00 0.00 1.47
1989 2011 4.159693 AGGGTTCAAACACCTTTTCTGAAC 59.840 41.667 4.98 4.98 43.24 3.18
2083 2105 3.430929 GGAGTAGAACACATCGGCATTCT 60.431 47.826 0.00 0.00 35.60 2.40
2084 2106 4.184629 GAGTAGAACACATCGGCATTCTT 58.815 43.478 0.00 0.00 33.53 2.52
2085 2107 4.184629 AGTAGAACACATCGGCATTCTTC 58.815 43.478 0.00 0.00 33.53 2.87
2086 2108 3.057969 AGAACACATCGGCATTCTTCA 57.942 42.857 0.00 0.00 0.00 3.02
2145 2167 8.068892 CCTCAAGGTAAGTAGAACTACTCATT 57.931 38.462 13.75 5.24 44.96 2.57
2150 2172 8.750515 AGGTAAGTAGAACTACTCATTAGGTC 57.249 38.462 13.75 0.00 44.96 3.85
2196 2218 5.759763 CAGGTGTAGCATAGCAATCACATAA 59.240 40.000 11.06 0.00 31.61 1.90
2197 2219 5.994054 AGGTGTAGCATAGCAATCACATAAG 59.006 40.000 11.06 0.00 31.61 1.73
2198 2220 5.760253 GGTGTAGCATAGCAATCACATAAGT 59.240 40.000 11.06 0.00 31.61 2.24
2199 2221 6.929049 GGTGTAGCATAGCAATCACATAAGTA 59.071 38.462 11.06 0.00 31.61 2.24
2210 2233 7.880195 AGCAATCACATAAGTACTTTTCTGTCT 59.120 33.333 14.49 5.90 0.00 3.41
2219 2242 7.948278 AAGTACTTTTCTGTCTGTGACATAC 57.052 36.000 1.12 0.00 41.94 2.39
2220 2243 6.456501 AGTACTTTTCTGTCTGTGACATACC 58.543 40.000 0.65 0.00 41.94 2.73
2223 2246 5.702670 ACTTTTCTGTCTGTGACATACCATG 59.297 40.000 0.65 0.00 41.94 3.66
2242 2265 7.391148 ACCATGATTATTTTCTGTGTGTACC 57.609 36.000 0.00 0.00 0.00 3.34
2243 2266 6.945435 ACCATGATTATTTTCTGTGTGTACCA 59.055 34.615 0.00 0.00 0.00 3.25
2244 2267 7.094377 ACCATGATTATTTTCTGTGTGTACCAC 60.094 37.037 0.00 7.34 44.78 4.16
2245 2268 7.121168 CCATGATTATTTTCTGTGTGTACCACT 59.879 37.037 13.41 0.00 44.81 4.00
2249 2272 8.691661 ATTATTTTCTGTGTGTACCACTTTCT 57.308 30.769 13.41 0.90 44.81 2.52
2255 2278 5.924254 TCTGTGTGTACCACTTTCTATTTCG 59.076 40.000 13.41 0.00 44.81 3.46
2431 2454 5.046231 ACCTTTTCTCCTCAGACCAATAGAC 60.046 44.000 0.00 0.00 0.00 2.59
2432 2455 5.188751 CCTTTTCTCCTCAGACCAATAGACT 59.811 44.000 0.00 0.00 0.00 3.24
2433 2456 5.667539 TTTCTCCTCAGACCAATAGACTG 57.332 43.478 0.00 0.00 0.00 3.51
2434 2457 3.027412 TCTCCTCAGACCAATAGACTGC 58.973 50.000 0.00 0.00 0.00 4.40
2435 2458 2.762887 CTCCTCAGACCAATAGACTGCA 59.237 50.000 0.00 0.00 0.00 4.41
2438 2466 3.387374 CCTCAGACCAATAGACTGCATCT 59.613 47.826 0.00 0.00 41.95 2.90
2443 2471 5.752472 CAGACCAATAGACTGCATCTTACTG 59.248 44.000 4.35 0.00 39.04 2.74
2455 2483 7.841956 ACTGCATCTTACTGTTAGTACTGAAT 58.158 34.615 5.39 0.00 28.93 2.57
2605 2633 1.204704 CTCGATCTTAGTGTGGCACCA 59.795 52.381 16.26 0.00 34.49 4.17
2650 2678 3.722147 TGAGCTAGAAATCGAGATTGCC 58.278 45.455 0.00 0.00 0.00 4.52
2931 2959 2.685897 GCGTAATGGCCCATTAGTCAAA 59.314 45.455 16.48 0.00 37.06 2.69
3074 3102 3.477210 GGAAGCCATCCGAAGATTACT 57.523 47.619 0.00 0.00 38.79 2.24
3114 3142 1.573436 GCTCTGTCAGCTGTTGTGC 59.427 57.895 14.67 12.87 45.83 4.57
3124 3152 3.130869 TCAGCTGTTGTGCTTGTTTTGAT 59.869 39.130 14.67 0.00 41.98 2.57
3125 3153 3.244345 CAGCTGTTGTGCTTGTTTTGATG 59.756 43.478 5.25 0.00 41.98 3.07
3181 3209 0.109132 CGCCAAAAGCCTCATGGAAC 60.109 55.000 0.18 0.00 38.78 3.62
3288 3318 8.867112 ATTTCTGCATTATAGCAATTTGACTG 57.133 30.769 0.00 0.00 45.13 3.51
3339 3370 4.729868 AGGCCTTGACTGTACAAATTCTT 58.270 39.130 0.00 0.00 0.00 2.52
3361 3392 8.438676 TCTTATCTTGCTACAATTTTCTAGCC 57.561 34.615 4.75 0.00 35.45 3.93
3425 3456 8.073768 CGTTTTAGTGTCCAGATAATGTTTGTT 58.926 33.333 0.00 0.00 0.00 2.83
3467 3501 4.532126 ACTGTTTCAGGTATGAGGTCATCA 59.468 41.667 0.00 0.00 37.87 3.07
3509 3543 3.067106 GACAGCATCTTTTCCTTCGACA 58.933 45.455 0.00 0.00 0.00 4.35
3515 3549 4.333926 GCATCTTTTCCTTCGACAATAGCT 59.666 41.667 0.00 0.00 0.00 3.32
3524 3558 0.464036 CGACAATAGCTACCTGCCCA 59.536 55.000 0.00 0.00 44.23 5.36
3782 3816 0.319986 TATGCGTTGAACGGAGCACA 60.320 50.000 20.01 8.58 46.90 4.57
3821 3855 1.658686 TTGTGCCAAACGGAAGCGTT 61.659 50.000 0.00 0.00 0.00 4.84
3868 3903 9.869844 GTGAACTATGTTAATCTGCATAACATC 57.130 33.333 21.59 12.56 45.98 3.06
3869 3904 9.612066 TGAACTATGTTAATCTGCATAACATCA 57.388 29.630 21.59 14.41 45.98 3.07
3883 3922 6.093909 TGCATAACATCACCTTCATAGTGTTG 59.906 38.462 0.00 0.00 39.66 3.33
3904 3943 4.855340 TGAAGAAACTTCACCTCCAAAGT 58.145 39.130 9.67 0.00 37.32 2.66
3906 3945 2.952310 AGAAACTTCACCTCCAAAGTGC 59.048 45.455 0.00 0.00 35.93 4.40
3923 3962 2.702898 TGCACAACACACATATGCAC 57.297 45.000 1.58 0.00 41.18 4.57
3924 3963 1.269174 TGCACAACACACATATGCACC 59.731 47.619 1.58 0.00 41.18 5.01
3928 3967 4.496341 GCACAACACACATATGCACCTATC 60.496 45.833 1.58 0.00 36.30 2.08
3934 3973 4.153655 CACACATATGCACCTATCATCTGC 59.846 45.833 1.58 0.00 0.00 4.26
3936 3975 5.001874 CACATATGCACCTATCATCTGCTT 58.998 41.667 1.58 0.00 0.00 3.91
3937 3976 5.121925 CACATATGCACCTATCATCTGCTTC 59.878 44.000 1.58 0.00 0.00 3.86
3962 4001 2.279935 TGGTCGGCACATAAAAACCT 57.720 45.000 0.00 0.00 0.00 3.50
3976 4015 8.025445 CACATAAAAACCTCAGGAAATTCTCTG 58.975 37.037 0.00 5.49 0.00 3.35
4003 4049 9.708222 CTGTAAATATGTAATGTGCTTCTGTTC 57.292 33.333 0.00 0.00 0.00 3.18
4028 4074 6.936279 TGATATTTCAGGTCCGGATAAGATC 58.064 40.000 7.81 10.04 0.00 2.75
4103 4149 0.253044 GTCTGGCCTACCTGCATGAA 59.747 55.000 3.32 0.00 36.63 2.57
4127 4173 3.926198 TGCCAATCCCCATGTTATTCAT 58.074 40.909 0.00 0.00 37.22 2.57
4217 4263 1.661341 CGAAGGAAGCATCAGAAGGG 58.339 55.000 0.00 0.00 0.00 3.95
4241 4287 2.508526 GAGCACATTTCCACTCAGGTT 58.491 47.619 0.00 0.00 39.02 3.50
4263 4309 4.586306 ATGGGAACTTTCGGGTAAGATT 57.414 40.909 0.00 0.00 0.00 2.40
4287 4333 0.179189 GCTGTTACTGCCATCGTTGC 60.179 55.000 2.72 0.00 0.00 4.17
4305 4351 1.488261 GCAGAGTAATACACCGCGCC 61.488 60.000 0.00 0.00 0.00 6.53
4306 4352 0.102481 CAGAGTAATACACCGCGCCT 59.898 55.000 0.00 0.00 0.00 5.52
4326 4372 5.048713 CGCCTAGTTTCTTTGAATCCTTGTT 60.049 40.000 0.00 0.00 0.00 2.83
4337 4383 7.759433 TCTTTGAATCCTTGTTGAGTTTTGAAC 59.241 33.333 0.00 0.00 0.00 3.18
4338 4384 5.577835 TGAATCCTTGTTGAGTTTTGAACG 58.422 37.500 0.00 0.00 36.23 3.95
4340 4386 3.611970 TCCTTGTTGAGTTTTGAACGGA 58.388 40.909 0.00 0.00 36.23 4.69
4341 4387 3.375922 TCCTTGTTGAGTTTTGAACGGAC 59.624 43.478 0.00 0.00 36.23 4.79
4387 4441 0.396139 ATGCAATGACGGGGCATCTT 60.396 50.000 0.00 0.00 44.41 2.40
4417 4471 1.226211 CGACGTGTACAGCTACGGG 60.226 63.158 11.18 0.00 44.07 5.28
4934 5003 2.833582 GGATCGAGTCCCTGGCGA 60.834 66.667 0.00 0.00 41.50 5.54
5060 5129 0.315568 GGGCGACTGGATGTAGCTAG 59.684 60.000 0.00 0.00 44.88 3.42
5061 5130 0.319125 GGCGACTGGATGTAGCTAGC 60.319 60.000 6.62 6.62 44.88 3.42
5062 5131 0.671251 GCGACTGGATGTAGCTAGCT 59.329 55.000 23.12 23.12 42.73 3.32
5063 5132 1.880675 GCGACTGGATGTAGCTAGCTA 59.119 52.381 20.67 20.67 42.73 3.32
5098 5170 2.584965 AGAGAGAGAGAGTTCCATCCCA 59.415 50.000 0.00 0.00 0.00 4.37
5133 5221 1.361632 CCCGCGCTAGGTAAGGTAC 59.638 63.158 5.56 0.00 0.00 3.34
5135 5223 0.030369 CCGCGCTAGGTAAGGTACTG 59.970 60.000 5.56 0.00 40.86 2.74
5142 5230 4.434520 GCTAGGTAAGGTACTGCTTCTTG 58.565 47.826 0.00 0.00 40.86 3.02
5277 5378 1.546476 AGGAGGACGCAAACTGAGTAG 59.454 52.381 0.00 0.00 28.29 2.57
5300 5401 0.389391 ACAGCATCCCTAACCGATCG 59.611 55.000 8.51 8.51 0.00 3.69
5311 5412 1.258445 AACCGATCGTTGAGGCCTCT 61.258 55.000 32.28 13.04 31.79 3.69
5312 5413 1.227089 CCGATCGTTGAGGCCTCTG 60.227 63.158 32.28 21.52 0.00 3.35
5331 5432 5.180304 CCTCTGAGGAGCAAAACTTTTACTC 59.820 44.000 19.13 6.07 37.67 2.59
5332 5433 5.063880 TCTGAGGAGCAAAACTTTTACTCC 58.936 41.667 19.99 19.99 40.92 3.85
5333 5434 4.787551 TGAGGAGCAAAACTTTTACTCCA 58.212 39.130 25.82 11.03 42.07 3.86
5334 5435 4.578928 TGAGGAGCAAAACTTTTACTCCAC 59.421 41.667 25.82 21.77 42.07 4.02
5335 5436 3.564225 AGGAGCAAAACTTTTACTCCACG 59.436 43.478 25.82 0.32 42.07 4.94
5336 5437 3.304458 GGAGCAAAACTTTTACTCCACGG 60.304 47.826 21.70 0.00 40.59 4.94
5337 5438 2.034179 AGCAAAACTTTTACTCCACGGC 59.966 45.455 0.00 0.00 0.00 5.68
5351 5452 4.544689 CGGCTGCCTCGACTCTCG 62.545 72.222 17.92 0.00 42.10 4.04
5384 5485 1.536709 CGCCCACCCGTGTAGTATAAC 60.537 57.143 0.00 0.00 0.00 1.89
5397 5498 7.980099 CCGTGTAGTATAACTTTTCCTCTTCAT 59.020 37.037 0.00 0.00 0.00 2.57
5402 5505 2.115343 ACTTTTCCTCTTCATCCCGC 57.885 50.000 0.00 0.00 0.00 6.13
5405 5508 1.899437 TTTCCTCTTCATCCCGCGCT 61.899 55.000 5.56 0.00 0.00 5.92
5406 5509 2.578163 TTCCTCTTCATCCCGCGCTG 62.578 60.000 5.56 0.00 0.00 5.18
5436 5539 4.838152 CCCCACCCTGCATCGTCG 62.838 72.222 0.00 0.00 0.00 5.12
5480 5583 0.178953 ATTTGCCTCTGCCAACACCT 60.179 50.000 0.00 0.00 36.33 4.00
5536 5639 1.726853 GCTCGCCAGTAGTTGTCATT 58.273 50.000 0.00 0.00 0.00 2.57
5557 5660 1.269831 GCCGGAATCAAGCTCTATCGT 60.270 52.381 5.05 0.00 0.00 3.73
5649 5758 2.268920 GCATCTCGAAGCCCCACA 59.731 61.111 0.00 0.00 0.00 4.17
5708 5817 1.802337 CGACCGTGACACCTCCTCAA 61.802 60.000 0.00 0.00 0.00 3.02
5722 5831 4.141158 ACCTCCTCAATCCTTCAAGTGTTT 60.141 41.667 0.00 0.00 0.00 2.83
5749 5861 0.250727 TGCCTAGGTGAGTTTGTGCC 60.251 55.000 11.31 0.00 0.00 5.01
5830 5943 1.010046 AGGGGTTGAGGGAGATGATCA 59.990 52.381 0.00 0.00 0.00 2.92
5927 6040 5.720520 AGGGAGTTAAGTTTAGAAGATCGGT 59.279 40.000 0.00 0.00 0.00 4.69
5937 6050 1.614413 AGAAGATCGGTTAGGATCCGC 59.386 52.381 5.98 0.55 46.49 5.54
5966 6079 8.451908 TTTTTAGAGGAGCAAATATAAGGAGC 57.548 34.615 0.00 0.00 0.00 4.70
5976 6089 9.377312 GAGCAAATATAAGGAGCTAAAGGATAG 57.623 37.037 0.00 0.00 35.36 2.08
6017 6130 8.672815 GCCTAAATTATAAAGGATCATGCTCTC 58.327 37.037 5.96 0.00 31.64 3.20
6018 6131 9.956640 CCTAAATTATAAAGGATCATGCTCTCT 57.043 33.333 0.00 0.00 31.64 3.10
6041 6154 1.276421 CCTCATCCTTCACCGAGTTGT 59.724 52.381 0.00 0.00 0.00 3.32
6069 6182 3.356529 AGCTTCACATAGGGAAACAGG 57.643 47.619 0.00 0.00 0.00 4.00
6071 6184 2.009774 CTTCACATAGGGAAACAGGCG 58.990 52.381 0.00 0.00 0.00 5.52
6074 6187 0.037590 ACATAGGGAAACAGGCGCAA 59.962 50.000 10.83 0.00 0.00 4.85
6106 6219 0.465097 CCCGAGCTCAAATGCATCCT 60.465 55.000 15.40 0.00 34.99 3.24
6119 6233 9.288576 CTCAAATGCATCCTATGGATAGTAAAA 57.711 33.333 0.00 0.00 40.98 1.52
6168 6306 7.333174 TGACATACGTGCAAAATTCTATGAAGA 59.667 33.333 0.00 0.00 0.00 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.436847 TCAGCATAAAAATGAAATCAGGTCCA 59.563 34.615 0.00 0.00 0.00 4.02
1 2 6.866480 TCAGCATAAAAATGAAATCAGGTCC 58.134 36.000 0.00 0.00 0.00 4.46
2 3 7.765307 TCTCAGCATAAAAATGAAATCAGGTC 58.235 34.615 0.00 0.00 0.00 3.85
4 5 6.696148 GCTCTCAGCATAAAAATGAAATCAGG 59.304 38.462 0.00 0.00 41.89 3.86
5 6 7.481642 AGCTCTCAGCATAAAAATGAAATCAG 58.518 34.615 0.00 0.00 45.56 2.90
6 7 7.400599 AGCTCTCAGCATAAAAATGAAATCA 57.599 32.000 0.00 0.00 45.56 2.57
16 17 8.690884 GGACATCTATATAGCTCTCAGCATAAA 58.309 37.037 4.75 0.00 45.56 1.40
17 18 7.836183 TGGACATCTATATAGCTCTCAGCATAA 59.164 37.037 4.75 0.00 45.56 1.90
18 19 7.349598 TGGACATCTATATAGCTCTCAGCATA 58.650 38.462 4.75 0.00 45.56 3.14
19 20 6.193504 TGGACATCTATATAGCTCTCAGCAT 58.806 40.000 4.75 0.00 45.56 3.79
20 21 5.574188 TGGACATCTATATAGCTCTCAGCA 58.426 41.667 4.75 0.00 45.56 4.41
21 22 6.522625 TTGGACATCTATATAGCTCTCAGC 57.477 41.667 4.75 0.00 42.84 4.26
22 23 7.492020 GCATTTGGACATCTATATAGCTCTCAG 59.508 40.741 4.75 0.00 0.00 3.35
23 24 7.179872 AGCATTTGGACATCTATATAGCTCTCA 59.820 37.037 4.75 0.00 0.00 3.27
24 25 7.555087 AGCATTTGGACATCTATATAGCTCTC 58.445 38.462 4.75 0.00 0.00 3.20
25 26 7.493499 AGCATTTGGACATCTATATAGCTCT 57.507 36.000 4.75 0.00 0.00 4.09
26 27 8.558973 AAAGCATTTGGACATCTATATAGCTC 57.441 34.615 4.75 0.03 36.60 4.09
43 44 5.179929 GTGCCTGCTAATTTTCAAAGCATTT 59.820 36.000 0.48 0.00 44.69 2.32
44 45 4.692155 GTGCCTGCTAATTTTCAAAGCATT 59.308 37.500 0.48 0.00 44.69 3.56
45 46 4.248058 GTGCCTGCTAATTTTCAAAGCAT 58.752 39.130 0.48 0.00 44.69 3.79
46 47 3.554752 GGTGCCTGCTAATTTTCAAAGCA 60.555 43.478 0.22 0.22 43.66 3.91
47 48 2.995939 GGTGCCTGCTAATTTTCAAAGC 59.004 45.455 0.00 0.00 36.77 3.51
48 49 4.022068 TGAGGTGCCTGCTAATTTTCAAAG 60.022 41.667 0.00 0.00 0.00 2.77
49 50 3.894427 TGAGGTGCCTGCTAATTTTCAAA 59.106 39.130 0.00 0.00 0.00 2.69
50 51 3.255642 GTGAGGTGCCTGCTAATTTTCAA 59.744 43.478 0.00 0.00 0.00 2.69
51 52 2.819608 GTGAGGTGCCTGCTAATTTTCA 59.180 45.455 0.00 0.00 0.00 2.69
52 53 2.159517 CGTGAGGTGCCTGCTAATTTTC 60.160 50.000 0.00 0.00 0.00 2.29
53 54 1.812571 CGTGAGGTGCCTGCTAATTTT 59.187 47.619 0.00 0.00 0.00 1.82
54 55 1.453155 CGTGAGGTGCCTGCTAATTT 58.547 50.000 0.00 0.00 0.00 1.82
55 56 1.026718 GCGTGAGGTGCCTGCTAATT 61.027 55.000 0.00 0.00 0.00 1.40
56 57 1.450312 GCGTGAGGTGCCTGCTAAT 60.450 57.895 0.00 0.00 0.00 1.73
57 58 2.047274 GCGTGAGGTGCCTGCTAA 60.047 61.111 0.00 0.00 0.00 3.09
58 59 2.184020 AATGCGTGAGGTGCCTGCTA 62.184 55.000 0.00 0.00 0.00 3.49
59 60 3.557903 AATGCGTGAGGTGCCTGCT 62.558 57.895 0.00 0.00 0.00 4.24
60 61 3.044059 GAATGCGTGAGGTGCCTGC 62.044 63.158 0.00 0.00 0.00 4.85
61 62 1.642037 CTGAATGCGTGAGGTGCCTG 61.642 60.000 0.00 0.00 0.00 4.85
62 63 1.376424 CTGAATGCGTGAGGTGCCT 60.376 57.895 0.00 0.00 0.00 4.75
63 64 1.639298 GACTGAATGCGTGAGGTGCC 61.639 60.000 0.00 0.00 0.00 5.01
64 65 0.950555 TGACTGAATGCGTGAGGTGC 60.951 55.000 0.00 0.00 0.00 5.01
65 66 1.662629 GATGACTGAATGCGTGAGGTG 59.337 52.381 0.00 0.00 0.00 4.00
66 67 1.552337 AGATGACTGAATGCGTGAGGT 59.448 47.619 0.00 0.00 0.00 3.85
67 68 2.306341 AGATGACTGAATGCGTGAGG 57.694 50.000 0.00 0.00 0.00 3.86
68 69 3.931468 AGAAAGATGACTGAATGCGTGAG 59.069 43.478 0.00 0.00 0.00 3.51
69 70 3.928992 GAGAAAGATGACTGAATGCGTGA 59.071 43.478 0.00 0.00 0.00 4.35
70 71 3.063180 GGAGAAAGATGACTGAATGCGTG 59.937 47.826 0.00 0.00 0.00 5.34
71 72 3.265791 GGAGAAAGATGACTGAATGCGT 58.734 45.455 0.00 0.00 0.00 5.24
72 73 3.063180 GTGGAGAAAGATGACTGAATGCG 59.937 47.826 0.00 0.00 0.00 4.73
73 74 4.005650 TGTGGAGAAAGATGACTGAATGC 58.994 43.478 0.00 0.00 0.00 3.56
74 75 6.564709 TTTGTGGAGAAAGATGACTGAATG 57.435 37.500 0.00 0.00 0.00 2.67
75 76 7.587037 TTTTTGTGGAGAAAGATGACTGAAT 57.413 32.000 0.00 0.00 0.00 2.57
131 132 9.054922 CACCCAATGAACAGTAAATTGAAAAAT 57.945 29.630 8.93 0.00 33.96 1.82
132 133 8.043710 ACACCCAATGAACAGTAAATTGAAAAA 58.956 29.630 8.93 0.00 33.96 1.94
133 134 7.560368 ACACCCAATGAACAGTAAATTGAAAA 58.440 30.769 8.93 0.00 33.96 2.29
134 135 7.118496 ACACCCAATGAACAGTAAATTGAAA 57.882 32.000 8.93 0.00 33.96 2.69
135 136 6.723298 ACACCCAATGAACAGTAAATTGAA 57.277 33.333 8.93 0.00 33.96 2.69
136 137 7.227873 TCTACACCCAATGAACAGTAAATTGA 58.772 34.615 8.93 0.00 33.96 2.57
137 138 7.447374 TCTACACCCAATGAACAGTAAATTG 57.553 36.000 2.39 2.39 0.00 2.32
138 139 7.888021 TCATCTACACCCAATGAACAGTAAATT 59.112 33.333 0.00 0.00 0.00 1.82
139 140 7.402054 TCATCTACACCCAATGAACAGTAAAT 58.598 34.615 0.00 0.00 0.00 1.40
140 141 6.774673 TCATCTACACCCAATGAACAGTAAA 58.225 36.000 0.00 0.00 0.00 2.01
141 142 6.013725 ACTCATCTACACCCAATGAACAGTAA 60.014 38.462 0.00 0.00 0.00 2.24
142 143 5.483937 ACTCATCTACACCCAATGAACAGTA 59.516 40.000 0.00 0.00 0.00 2.74
143 144 4.287067 ACTCATCTACACCCAATGAACAGT 59.713 41.667 0.00 0.00 0.00 3.55
144 145 4.836825 ACTCATCTACACCCAATGAACAG 58.163 43.478 0.00 0.00 0.00 3.16
145 146 4.323485 GGACTCATCTACACCCAATGAACA 60.323 45.833 0.00 0.00 0.00 3.18
146 147 4.192317 GGACTCATCTACACCCAATGAAC 58.808 47.826 0.00 0.00 0.00 3.18
147 148 3.118775 CGGACTCATCTACACCCAATGAA 60.119 47.826 0.00 0.00 0.00 2.57
148 149 2.430694 CGGACTCATCTACACCCAATGA 59.569 50.000 0.00 0.00 0.00 2.57
149 150 2.483714 CCGGACTCATCTACACCCAATG 60.484 54.545 0.00 0.00 0.00 2.82
150 151 1.762957 CCGGACTCATCTACACCCAAT 59.237 52.381 0.00 0.00 0.00 3.16
151 152 1.191535 CCGGACTCATCTACACCCAA 58.808 55.000 0.00 0.00 0.00 4.12
152 153 0.686441 CCCGGACTCATCTACACCCA 60.686 60.000 0.73 0.00 0.00 4.51
153 154 2.029307 GCCCGGACTCATCTACACCC 62.029 65.000 0.73 0.00 0.00 4.61
154 155 1.043673 AGCCCGGACTCATCTACACC 61.044 60.000 0.73 0.00 0.00 4.16
155 156 0.103208 CAGCCCGGACTCATCTACAC 59.897 60.000 0.73 0.00 0.00 2.90
156 157 0.033503 TCAGCCCGGACTCATCTACA 60.034 55.000 0.73 0.00 0.00 2.74
157 158 0.671251 CTCAGCCCGGACTCATCTAC 59.329 60.000 0.73 0.00 0.00 2.59
158 159 0.551396 TCTCAGCCCGGACTCATCTA 59.449 55.000 0.73 0.00 0.00 1.98
159 160 0.324738 TTCTCAGCCCGGACTCATCT 60.325 55.000 0.73 0.00 0.00 2.90
160 161 0.755686 ATTCTCAGCCCGGACTCATC 59.244 55.000 0.73 0.00 0.00 2.92
161 162 1.134280 CAATTCTCAGCCCGGACTCAT 60.134 52.381 0.73 0.00 0.00 2.90
162 163 0.250234 CAATTCTCAGCCCGGACTCA 59.750 55.000 0.73 0.00 0.00 3.41
163 164 0.462759 CCAATTCTCAGCCCGGACTC 60.463 60.000 0.73 0.00 0.00 3.36
164 165 0.909610 TCCAATTCTCAGCCCGGACT 60.910 55.000 0.73 0.00 0.00 3.85
165 166 0.181350 ATCCAATTCTCAGCCCGGAC 59.819 55.000 0.73 0.00 0.00 4.79
166 167 1.801242 TATCCAATTCTCAGCCCGGA 58.199 50.000 0.73 0.00 0.00 5.14
167 168 2.867109 ATATCCAATTCTCAGCCCGG 57.133 50.000 0.00 0.00 0.00 5.73
168 169 2.738846 CGAATATCCAATTCTCAGCCCG 59.261 50.000 0.00 0.00 0.00 6.13
169 170 3.748568 GTCGAATATCCAATTCTCAGCCC 59.251 47.826 0.00 0.00 0.00 5.19
170 171 4.636249 AGTCGAATATCCAATTCTCAGCC 58.364 43.478 0.00 0.00 0.00 4.85
171 172 6.451393 ACTAGTCGAATATCCAATTCTCAGC 58.549 40.000 0.00 0.00 0.00 4.26
172 173 9.566530 CATACTAGTCGAATATCCAATTCTCAG 57.433 37.037 0.00 0.00 0.00 3.35
173 174 8.029522 GCATACTAGTCGAATATCCAATTCTCA 58.970 37.037 0.00 0.00 0.00 3.27
174 175 7.489757 GGCATACTAGTCGAATATCCAATTCTC 59.510 40.741 0.00 0.00 0.00 2.87
175 176 7.179338 AGGCATACTAGTCGAATATCCAATTCT 59.821 37.037 0.00 0.00 0.00 2.40
176 177 7.324178 AGGCATACTAGTCGAATATCCAATTC 58.676 38.462 0.00 0.00 0.00 2.17
177 178 7.246171 AGGCATACTAGTCGAATATCCAATT 57.754 36.000 0.00 0.00 0.00 2.32
178 179 6.859112 AGGCATACTAGTCGAATATCCAAT 57.141 37.500 0.00 0.00 0.00 3.16
179 180 6.946583 AGTAGGCATACTAGTCGAATATCCAA 59.053 38.462 9.76 0.00 40.57 3.53
180 181 6.482524 AGTAGGCATACTAGTCGAATATCCA 58.517 40.000 9.76 0.00 40.57 3.41
181 182 8.680039 ATAGTAGGCATACTAGTCGAATATCC 57.320 38.462 21.48 0.00 45.42 2.59
182 183 9.938670 CAATAGTAGGCATACTAGTCGAATATC 57.061 37.037 21.48 0.00 45.42 1.63
183 184 9.463902 ACAATAGTAGGCATACTAGTCGAATAT 57.536 33.333 21.48 2.77 45.42 1.28
184 185 8.859236 ACAATAGTAGGCATACTAGTCGAATA 57.141 34.615 21.48 0.40 45.42 1.75
185 186 7.762588 ACAATAGTAGGCATACTAGTCGAAT 57.237 36.000 21.48 4.14 45.42 3.34
186 187 8.727910 CATACAATAGTAGGCATACTAGTCGAA 58.272 37.037 21.48 8.64 45.42 3.71
187 188 8.098912 TCATACAATAGTAGGCATACTAGTCGA 58.901 37.037 21.48 10.65 45.42 4.20
188 189 8.265165 TCATACAATAGTAGGCATACTAGTCG 57.735 38.462 21.48 15.66 45.42 4.18
189 190 9.233649 ACTCATACAATAGTAGGCATACTAGTC 57.766 37.037 21.48 0.00 45.42 2.59
190 191 9.015367 CACTCATACAATAGTAGGCATACTAGT 57.985 37.037 21.48 17.17 45.42 2.57
191 192 8.462811 CCACTCATACAATAGTAGGCATACTAG 58.537 40.741 21.48 12.51 45.42 2.57
192 193 8.168058 TCCACTCATACAATAGTAGGCATACTA 58.832 37.037 19.61 19.61 46.09 1.82
193 194 7.010771 TCCACTCATACAATAGTAGGCATACT 58.989 38.462 16.24 16.24 44.57 2.12
194 195 7.039644 AGTCCACTCATACAATAGTAGGCATAC 60.040 40.741 0.00 0.00 32.29 2.39
195 196 7.010771 AGTCCACTCATACAATAGTAGGCATA 58.989 38.462 0.00 0.00 32.29 3.14
196 197 5.841237 AGTCCACTCATACAATAGTAGGCAT 59.159 40.000 0.00 0.00 32.29 4.40
197 198 5.208890 AGTCCACTCATACAATAGTAGGCA 58.791 41.667 0.00 0.00 32.29 4.75
198 199 5.793030 AGTCCACTCATACAATAGTAGGC 57.207 43.478 0.00 0.00 32.29 3.93
199 200 8.637196 TGATAGTCCACTCATACAATAGTAGG 57.363 38.462 0.00 0.00 32.86 3.18
200 201 8.735315 CCTGATAGTCCACTCATACAATAGTAG 58.265 40.741 0.00 0.00 32.86 2.57
201 202 8.225416 ACCTGATAGTCCACTCATACAATAGTA 58.775 37.037 0.00 0.00 34.10 1.82
202 203 7.014711 CACCTGATAGTCCACTCATACAATAGT 59.985 40.741 0.00 0.00 0.00 2.12
203 204 7.231519 TCACCTGATAGTCCACTCATACAATAG 59.768 40.741 0.00 0.00 0.00 1.73
204 205 7.066781 TCACCTGATAGTCCACTCATACAATA 58.933 38.462 0.00 0.00 0.00 1.90
205 206 5.899547 TCACCTGATAGTCCACTCATACAAT 59.100 40.000 0.00 0.00 0.00 2.71
206 207 5.269189 TCACCTGATAGTCCACTCATACAA 58.731 41.667 0.00 0.00 0.00 2.41
207 208 4.867086 TCACCTGATAGTCCACTCATACA 58.133 43.478 0.00 0.00 0.00 2.29
208 209 5.854010 TTCACCTGATAGTCCACTCATAC 57.146 43.478 0.00 0.00 0.00 2.39
209 210 6.136155 TCATTCACCTGATAGTCCACTCATA 58.864 40.000 0.00 0.00 0.00 2.15
210 211 4.964897 TCATTCACCTGATAGTCCACTCAT 59.035 41.667 0.00 0.00 0.00 2.90
211 212 4.352893 TCATTCACCTGATAGTCCACTCA 58.647 43.478 0.00 0.00 0.00 3.41
212 213 5.344743 TTCATTCACCTGATAGTCCACTC 57.655 43.478 0.00 0.00 0.00 3.51
213 214 4.383552 GCTTCATTCACCTGATAGTCCACT 60.384 45.833 0.00 0.00 0.00 4.00
214 215 3.873952 GCTTCATTCACCTGATAGTCCAC 59.126 47.826 0.00 0.00 0.00 4.02
215 216 3.430790 CGCTTCATTCACCTGATAGTCCA 60.431 47.826 0.00 0.00 0.00 4.02
216 217 3.126831 CGCTTCATTCACCTGATAGTCC 58.873 50.000 0.00 0.00 0.00 3.85
217 218 3.786635 ACGCTTCATTCACCTGATAGTC 58.213 45.455 0.00 0.00 0.00 2.59
218 219 3.895232 ACGCTTCATTCACCTGATAGT 57.105 42.857 0.00 0.00 0.00 2.12
219 220 4.201851 CCAAACGCTTCATTCACCTGATAG 60.202 45.833 0.00 0.00 0.00 2.08
220 221 3.689161 CCAAACGCTTCATTCACCTGATA 59.311 43.478 0.00 0.00 0.00 2.15
221 222 2.489329 CCAAACGCTTCATTCACCTGAT 59.511 45.455 0.00 0.00 0.00 2.90
222 223 1.879380 CCAAACGCTTCATTCACCTGA 59.121 47.619 0.00 0.00 0.00 3.86
223 224 1.879380 TCCAAACGCTTCATTCACCTG 59.121 47.619 0.00 0.00 0.00 4.00
224 225 2.154462 CTCCAAACGCTTCATTCACCT 58.846 47.619 0.00 0.00 0.00 4.00
225 226 1.401539 GCTCCAAACGCTTCATTCACC 60.402 52.381 0.00 0.00 0.00 4.02
226 227 1.537202 AGCTCCAAACGCTTCATTCAC 59.463 47.619 0.00 0.00 32.98 3.18
227 228 1.806542 GAGCTCCAAACGCTTCATTCA 59.193 47.619 0.87 0.00 37.96 2.57
228 229 1.806542 TGAGCTCCAAACGCTTCATTC 59.193 47.619 12.15 0.00 37.96 2.67
229 230 1.808945 CTGAGCTCCAAACGCTTCATT 59.191 47.619 12.15 0.00 37.96 2.57
230 231 1.446907 CTGAGCTCCAAACGCTTCAT 58.553 50.000 12.15 0.00 37.96 2.57
231 232 1.230635 GCTGAGCTCCAAACGCTTCA 61.231 55.000 12.15 0.00 37.96 3.02
232 233 1.499502 GCTGAGCTCCAAACGCTTC 59.500 57.895 12.15 0.00 37.96 3.86
233 234 1.968540 GGCTGAGCTCCAAACGCTT 60.969 57.895 12.15 0.00 37.96 4.68
234 235 2.359230 GGCTGAGCTCCAAACGCT 60.359 61.111 12.15 0.00 41.15 5.07
235 236 1.986575 GATGGCTGAGCTCCAAACGC 61.987 60.000 12.15 5.92 37.13 4.84
236 237 0.674581 TGATGGCTGAGCTCCAAACG 60.675 55.000 12.15 0.00 37.13 3.60
237 238 1.404391 CATGATGGCTGAGCTCCAAAC 59.596 52.381 12.15 2.76 37.13 2.93
238 239 1.683938 CCATGATGGCTGAGCTCCAAA 60.684 52.381 12.15 0.00 37.13 3.28
239 240 0.106868 CCATGATGGCTGAGCTCCAA 60.107 55.000 12.15 0.00 37.13 3.53
240 241 0.984432 TCCATGATGGCTGAGCTCCA 60.984 55.000 12.15 2.61 37.47 3.86
241 242 0.182061 TTCCATGATGGCTGAGCTCC 59.818 55.000 12.15 0.00 37.47 4.70
242 243 2.273538 ATTCCATGATGGCTGAGCTC 57.726 50.000 6.59 6.82 37.47 4.09
243 244 2.440627 TGTATTCCATGATGGCTGAGCT 59.559 45.455 6.59 0.00 37.47 4.09
244 245 2.854963 TGTATTCCATGATGGCTGAGC 58.145 47.619 6.59 0.00 37.47 4.26
316 317 7.759489 TCCTTGTATACTTGTGCATCTTTTT 57.241 32.000 4.17 0.00 0.00 1.94
317 318 7.394359 ACATCCTTGTATACTTGTGCATCTTTT 59.606 33.333 4.17 0.00 33.16 2.27
318 319 6.886459 ACATCCTTGTATACTTGTGCATCTTT 59.114 34.615 4.17 0.00 33.16 2.52
319 320 6.317140 CACATCCTTGTATACTTGTGCATCTT 59.683 38.462 4.17 0.00 33.76 2.40
320 321 5.819379 CACATCCTTGTATACTTGTGCATCT 59.181 40.000 4.17 0.00 33.76 2.90
321 322 5.586243 ACACATCCTTGTATACTTGTGCATC 59.414 40.000 16.24 0.00 38.35 3.91
322 323 5.500234 ACACATCCTTGTATACTTGTGCAT 58.500 37.500 16.24 3.87 38.35 3.96
323 324 4.905429 ACACATCCTTGTATACTTGTGCA 58.095 39.130 16.24 0.00 38.35 4.57
324 325 6.511767 GCATACACATCCTTGTATACTTGTGC 60.512 42.308 16.24 0.00 40.11 4.57
325 326 6.538381 TGCATACACATCCTTGTATACTTGTG 59.462 38.462 4.17 11.60 40.11 3.33
326 327 6.649155 TGCATACACATCCTTGTATACTTGT 58.351 36.000 4.17 0.00 40.11 3.16
327 328 7.227314 ACATGCATACACATCCTTGTATACTTG 59.773 37.037 0.00 7.39 40.11 3.16
328 329 7.282585 ACATGCATACACATCCTTGTATACTT 58.717 34.615 0.00 0.00 40.11 2.24
329 330 6.830912 ACATGCATACACATCCTTGTATACT 58.169 36.000 0.00 0.00 40.11 2.12
330 331 8.601845 TTACATGCATACACATCCTTGTATAC 57.398 34.615 0.00 0.00 40.11 1.47
331 332 9.620259 TTTTACATGCATACACATCCTTGTATA 57.380 29.630 0.00 0.00 40.11 1.47
332 333 8.518430 TTTTACATGCATACACATCCTTGTAT 57.482 30.769 0.00 0.00 42.34 2.29
333 334 7.929941 TTTTACATGCATACACATCCTTGTA 57.070 32.000 0.00 0.00 36.41 2.41
334 335 6.832520 TTTTACATGCATACACATCCTTGT 57.167 33.333 0.00 0.00 36.15 3.16
335 336 7.259882 ACATTTTACATGCATACACATCCTTG 58.740 34.615 0.00 0.00 0.00 3.61
336 337 7.122501 TGACATTTTACATGCATACACATCCTT 59.877 33.333 0.00 0.00 0.00 3.36
337 338 6.602803 TGACATTTTACATGCATACACATCCT 59.397 34.615 0.00 0.00 0.00 3.24
338 339 6.794374 TGACATTTTACATGCATACACATCC 58.206 36.000 0.00 0.00 0.00 3.51
339 340 6.914215 CCTGACATTTTACATGCATACACATC 59.086 38.462 0.00 0.00 0.00 3.06
340 341 6.602803 TCCTGACATTTTACATGCATACACAT 59.397 34.615 0.00 0.00 0.00 3.21
341 342 5.942826 TCCTGACATTTTACATGCATACACA 59.057 36.000 0.00 0.00 0.00 3.72
342 343 6.435430 TCCTGACATTTTACATGCATACAC 57.565 37.500 0.00 0.00 0.00 2.90
343 344 6.827762 TCATCCTGACATTTTACATGCATACA 59.172 34.615 0.00 0.00 0.00 2.29
344 345 7.263100 TCATCCTGACATTTTACATGCATAC 57.737 36.000 0.00 0.00 0.00 2.39
345 346 7.878547 TTCATCCTGACATTTTACATGCATA 57.121 32.000 0.00 0.00 0.00 3.14
346 347 6.778834 TTCATCCTGACATTTTACATGCAT 57.221 33.333 0.00 0.00 0.00 3.96
347 348 6.587206 TTTCATCCTGACATTTTACATGCA 57.413 33.333 0.00 0.00 0.00 3.96
348 349 7.649306 GGTATTTCATCCTGACATTTTACATGC 59.351 37.037 0.00 0.00 0.00 4.06
349 350 8.906867 AGGTATTTCATCCTGACATTTTACATG 58.093 33.333 0.00 0.00 32.29 3.21
350 351 9.479549 AAGGTATTTCATCCTGACATTTTACAT 57.520 29.630 0.00 0.00 33.97 2.29
351 352 8.877864 AAGGTATTTCATCCTGACATTTTACA 57.122 30.769 0.00 0.00 33.97 2.41
352 353 8.956426 TGAAGGTATTTCATCCTGACATTTTAC 58.044 33.333 0.00 0.00 40.82 2.01
353 354 9.527157 TTGAAGGTATTTCATCCTGACATTTTA 57.473 29.630 0.00 0.00 44.90 1.52
354 355 8.421249 TTGAAGGTATTTCATCCTGACATTTT 57.579 30.769 0.00 0.00 44.90 1.82
355 356 8.421249 TTTGAAGGTATTTCATCCTGACATTT 57.579 30.769 0.00 0.00 44.90 2.32
356 357 8.472413 CATTTGAAGGTATTTCATCCTGACATT 58.528 33.333 0.00 0.00 44.90 2.71
357 358 7.417116 GCATTTGAAGGTATTTCATCCTGACAT 60.417 37.037 0.00 0.00 44.90 3.06
358 359 6.127647 GCATTTGAAGGTATTTCATCCTGACA 60.128 38.462 0.00 0.00 44.90 3.58
359 360 6.268566 GCATTTGAAGGTATTTCATCCTGAC 58.731 40.000 0.00 0.00 44.90 3.51
360 361 5.360714 GGCATTTGAAGGTATTTCATCCTGA 59.639 40.000 0.00 0.00 44.90 3.86
361 362 5.127519 TGGCATTTGAAGGTATTTCATCCTG 59.872 40.000 0.00 0.00 44.90 3.86
362 363 5.271598 TGGCATTTGAAGGTATTTCATCCT 58.728 37.500 0.00 0.00 44.90 3.24
363 364 5.596836 TGGCATTTGAAGGTATTTCATCC 57.403 39.130 0.00 0.00 44.90 3.51
364 365 6.921857 CAGATGGCATTTGAAGGTATTTCATC 59.078 38.462 12.37 0.00 44.90 2.92
365 366 6.381994 ACAGATGGCATTTGAAGGTATTTCAT 59.618 34.615 23.20 0.00 44.90 2.57
366 367 5.716228 ACAGATGGCATTTGAAGGTATTTCA 59.284 36.000 23.20 0.00 43.92 2.69
367 368 6.038356 CACAGATGGCATTTGAAGGTATTTC 58.962 40.000 23.20 0.00 36.29 2.17
368 369 5.625197 GCACAGATGGCATTTGAAGGTATTT 60.625 40.000 23.20 0.00 0.00 1.40
369 370 4.142093 GCACAGATGGCATTTGAAGGTATT 60.142 41.667 23.20 0.00 0.00 1.89
370 371 3.382546 GCACAGATGGCATTTGAAGGTAT 59.617 43.478 23.20 0.00 0.00 2.73
371 372 2.754552 GCACAGATGGCATTTGAAGGTA 59.245 45.455 23.20 0.00 0.00 3.08
372 373 1.547372 GCACAGATGGCATTTGAAGGT 59.453 47.619 23.20 0.00 0.00 3.50
373 374 1.546923 TGCACAGATGGCATTTGAAGG 59.453 47.619 23.20 13.08 36.11 3.46
374 375 3.306917 TTGCACAGATGGCATTTGAAG 57.693 42.857 23.20 15.52 41.58 3.02
375 376 3.747854 TTTGCACAGATGGCATTTGAA 57.252 38.095 23.20 5.85 41.58 2.69
376 377 3.747854 TTTTGCACAGATGGCATTTGA 57.252 38.095 23.20 0.00 41.58 2.69
377 378 6.483385 TTTATTTTGCACAGATGGCATTTG 57.517 33.333 15.77 15.77 41.58 2.32
378 379 7.690952 ATTTTATTTTGCACAGATGGCATTT 57.309 28.000 0.00 0.00 41.58 2.32
379 380 8.789825 TTATTTTATTTTGCACAGATGGCATT 57.210 26.923 0.00 0.00 41.58 3.56
380 381 8.789825 TTTATTTTATTTTGCACAGATGGCAT 57.210 26.923 0.00 0.00 41.58 4.40
381 382 8.613060 TTTTATTTTATTTTGCACAGATGGCA 57.387 26.923 0.00 0.00 40.00 4.92
396 397 9.904198 CCCCAAAGTCCATGAATTTTATTTTAT 57.096 29.630 0.00 0.00 27.08 1.40
397 398 9.105844 TCCCCAAAGTCCATGAATTTTATTTTA 57.894 29.630 0.00 0.00 27.08 1.52
398 399 7.983363 TCCCCAAAGTCCATGAATTTTATTTT 58.017 30.769 0.00 0.00 27.08 1.82
399 400 7.566658 TCCCCAAAGTCCATGAATTTTATTT 57.433 32.000 0.00 0.00 27.08 1.40
400 401 7.402650 TCATCCCCAAAGTCCATGAATTTTATT 59.597 33.333 0.00 0.00 27.08 1.40
401 402 6.902416 TCATCCCCAAAGTCCATGAATTTTAT 59.098 34.615 0.00 0.00 27.08 1.40
402 403 6.259893 TCATCCCCAAAGTCCATGAATTTTA 58.740 36.000 0.00 0.00 27.08 1.52
403 404 5.092968 TCATCCCCAAAGTCCATGAATTTT 58.907 37.500 0.00 0.00 27.08 1.82
404 405 4.686891 TCATCCCCAAAGTCCATGAATTT 58.313 39.130 0.00 0.00 29.77 1.82
405 406 4.335735 TCATCCCCAAAGTCCATGAATT 57.664 40.909 0.00 0.00 0.00 2.17
406 407 4.026052 GTTCATCCCCAAAGTCCATGAAT 58.974 43.478 0.00 0.00 36.22 2.57
407 408 3.181424 TGTTCATCCCCAAAGTCCATGAA 60.181 43.478 0.00 0.00 32.33 2.57
408 409 2.378208 TGTTCATCCCCAAAGTCCATGA 59.622 45.455 0.00 0.00 0.00 3.07
409 410 2.756760 CTGTTCATCCCCAAAGTCCATG 59.243 50.000 0.00 0.00 0.00 3.66
410 411 2.379907 ACTGTTCATCCCCAAAGTCCAT 59.620 45.455 0.00 0.00 0.00 3.41
411 412 1.780309 ACTGTTCATCCCCAAAGTCCA 59.220 47.619 0.00 0.00 0.00 4.02
412 413 2.586648 ACTGTTCATCCCCAAAGTCC 57.413 50.000 0.00 0.00 0.00 3.85
413 414 4.843728 TGATACTGTTCATCCCCAAAGTC 58.156 43.478 0.00 0.00 0.00 3.01
414 415 4.927267 TGATACTGTTCATCCCCAAAGT 57.073 40.909 0.00 0.00 0.00 2.66
415 416 4.037208 GCATGATACTGTTCATCCCCAAAG 59.963 45.833 0.00 0.00 34.09 2.77
416 417 3.953612 GCATGATACTGTTCATCCCCAAA 59.046 43.478 0.00 0.00 34.09 3.28
417 418 3.554934 GCATGATACTGTTCATCCCCAA 58.445 45.455 0.00 0.00 34.09 4.12
418 419 2.485302 CGCATGATACTGTTCATCCCCA 60.485 50.000 0.00 0.00 34.09 4.96
419 420 2.146342 CGCATGATACTGTTCATCCCC 58.854 52.381 0.00 0.00 34.09 4.81
420 421 1.532868 GCGCATGATACTGTTCATCCC 59.467 52.381 0.30 0.00 34.09 3.85
421 422 2.487934 AGCGCATGATACTGTTCATCC 58.512 47.619 11.47 0.00 34.09 3.51
422 423 4.550422 TCTAGCGCATGATACTGTTCATC 58.450 43.478 11.47 0.00 34.09 2.92
423 424 4.590850 TCTAGCGCATGATACTGTTCAT 57.409 40.909 11.47 0.00 36.79 2.57
424 425 4.363138 CTTCTAGCGCATGATACTGTTCA 58.637 43.478 11.47 0.00 0.00 3.18
425 426 3.183373 GCTTCTAGCGCATGATACTGTTC 59.817 47.826 11.47 0.00 0.00 3.18
426 427 3.126831 GCTTCTAGCGCATGATACTGTT 58.873 45.455 11.47 0.00 0.00 3.16
427 428 2.546795 GGCTTCTAGCGCATGATACTGT 60.547 50.000 11.47 0.00 43.62 3.55
428 429 2.064762 GGCTTCTAGCGCATGATACTG 58.935 52.381 11.47 0.00 43.62 2.74
429 430 1.688735 TGGCTTCTAGCGCATGATACT 59.311 47.619 11.47 0.00 43.62 2.12
430 431 1.795286 GTGGCTTCTAGCGCATGATAC 59.205 52.381 11.47 2.21 43.62 2.24
431 432 1.412343 TGTGGCTTCTAGCGCATGATA 59.588 47.619 11.47 0.00 43.62 2.15
432 433 0.178767 TGTGGCTTCTAGCGCATGAT 59.821 50.000 11.47 0.00 43.62 2.45
433 434 0.460811 CTGTGGCTTCTAGCGCATGA 60.461 55.000 11.47 3.82 43.62 3.07
434 435 0.460811 TCTGTGGCTTCTAGCGCATG 60.461 55.000 11.47 0.79 43.62 4.06
435 436 0.467384 ATCTGTGGCTTCTAGCGCAT 59.533 50.000 11.47 0.00 43.62 4.73
436 437 0.250234 AATCTGTGGCTTCTAGCGCA 59.750 50.000 11.47 0.00 43.62 6.09
437 438 2.131183 CTAATCTGTGGCTTCTAGCGC 58.869 52.381 0.00 0.00 43.62 5.92
438 439 2.131183 GCTAATCTGTGGCTTCTAGCG 58.869 52.381 0.00 0.00 43.62 4.26
439 440 3.467374 AGCTAATCTGTGGCTTCTAGC 57.533 47.619 0.00 0.00 41.46 3.42
440 441 6.749923 AAAAAGCTAATCTGTGGCTTCTAG 57.250 37.500 0.00 0.00 44.17 2.43
462 463 3.131223 TCAAATGAGGGTTGTGCGAAAAA 59.869 39.130 0.00 0.00 0.00 1.94
463 464 2.690497 TCAAATGAGGGTTGTGCGAAAA 59.310 40.909 0.00 0.00 0.00 2.29
464 465 2.302260 TCAAATGAGGGTTGTGCGAAA 58.698 42.857 0.00 0.00 0.00 3.46
465 466 1.974265 TCAAATGAGGGTTGTGCGAA 58.026 45.000 0.00 0.00 0.00 4.70
466 467 1.606668 GTTCAAATGAGGGTTGTGCGA 59.393 47.619 0.00 0.00 0.00 5.10
467 468 1.336440 TGTTCAAATGAGGGTTGTGCG 59.664 47.619 0.00 0.00 0.00 5.34
468 469 2.622942 TCTGTTCAAATGAGGGTTGTGC 59.377 45.455 0.00 0.00 0.00 4.57
469 470 5.458041 AATCTGTTCAAATGAGGGTTGTG 57.542 39.130 0.00 0.00 0.00 3.33
470 471 5.278463 CGAAATCTGTTCAAATGAGGGTTGT 60.278 40.000 0.00 0.00 0.00 3.32
471 472 5.156355 CGAAATCTGTTCAAATGAGGGTTG 58.844 41.667 0.00 0.00 0.00 3.77
472 473 4.827284 ACGAAATCTGTTCAAATGAGGGTT 59.173 37.500 0.00 0.00 0.00 4.11
473 474 4.398319 ACGAAATCTGTTCAAATGAGGGT 58.602 39.130 0.00 0.00 0.00 4.34
474 475 4.142600 GGACGAAATCTGTTCAAATGAGGG 60.143 45.833 0.00 0.00 0.00 4.30
475 476 4.697352 AGGACGAAATCTGTTCAAATGAGG 59.303 41.667 0.00 0.00 0.00 3.86
476 477 5.869753 AGGACGAAATCTGTTCAAATGAG 57.130 39.130 0.00 0.00 0.00 2.90
477 478 7.737972 TTTAGGACGAAATCTGTTCAAATGA 57.262 32.000 0.00 0.00 0.00 2.57
478 479 8.795786 TTTTTAGGACGAAATCTGTTCAAATG 57.204 30.769 0.00 0.00 0.00 2.32
512 513 2.019249 CATGGAGGCATAACACAGGTG 58.981 52.381 0.00 0.00 0.00 4.00
513 514 1.635487 ACATGGAGGCATAACACAGGT 59.365 47.619 0.00 0.00 0.00 4.00
514 515 2.425143 ACATGGAGGCATAACACAGG 57.575 50.000 0.00 0.00 0.00 4.00
515 516 4.406648 TCTACATGGAGGCATAACACAG 57.593 45.455 4.74 0.00 0.00 3.66
516 517 5.372343 AATCTACATGGAGGCATAACACA 57.628 39.130 4.74 0.00 0.00 3.72
517 518 5.590259 ACAAATCTACATGGAGGCATAACAC 59.410 40.000 4.74 0.00 0.00 3.32
518 519 5.754782 ACAAATCTACATGGAGGCATAACA 58.245 37.500 4.74 0.00 0.00 2.41
519 520 7.986085 ATACAAATCTACATGGAGGCATAAC 57.014 36.000 4.74 0.00 0.00 1.89
520 521 8.995027 AAATACAAATCTACATGGAGGCATAA 57.005 30.769 4.74 0.00 0.00 1.90
521 522 8.995027 AAAATACAAATCTACATGGAGGCATA 57.005 30.769 4.74 0.00 0.00 3.14
522 523 7.902920 AAAATACAAATCTACATGGAGGCAT 57.097 32.000 4.74 0.00 0.00 4.40
523 524 7.716799 AAAAATACAAATCTACATGGAGGCA 57.283 32.000 4.74 0.00 0.00 4.75
598 599 9.548208 CGAAAATTGCTTTTGAAGGTTTTAAAA 57.452 25.926 0.00 0.00 34.73 1.52
599 600 8.722394 ACGAAAATTGCTTTTGAAGGTTTTAAA 58.278 25.926 0.00 0.00 34.73 1.52
600 601 8.257830 ACGAAAATTGCTTTTGAAGGTTTTAA 57.742 26.923 0.00 0.00 34.73 1.52
601 602 7.835634 ACGAAAATTGCTTTTGAAGGTTTTA 57.164 28.000 0.00 0.00 34.73 1.52
602 603 6.735678 ACGAAAATTGCTTTTGAAGGTTTT 57.264 29.167 0.00 0.00 34.73 2.43
603 604 6.735678 AACGAAAATTGCTTTTGAAGGTTT 57.264 29.167 0.00 0.00 34.73 3.27
604 605 8.432110 AATAACGAAAATTGCTTTTGAAGGTT 57.568 26.923 0.00 0.00 34.73 3.50
605 606 9.191995 CTAATAACGAAAATTGCTTTTGAAGGT 57.808 29.630 0.00 0.00 34.73 3.50
606 607 8.647226 CCTAATAACGAAAATTGCTTTTGAAGG 58.353 33.333 0.00 0.00 34.73 3.46
607 608 9.191995 ACCTAATAACGAAAATTGCTTTTGAAG 57.808 29.630 0.00 0.00 34.73 3.02
608 609 9.535878 AACCTAATAACGAAAATTGCTTTTGAA 57.464 25.926 0.00 0.00 34.73 2.69
609 610 8.973378 CAACCTAATAACGAAAATTGCTTTTGA 58.027 29.630 0.00 0.00 34.73 2.69
610 611 8.220434 CCAACCTAATAACGAAAATTGCTTTTG 58.780 33.333 0.00 0.00 34.73 2.44
611 612 7.095397 GCCAACCTAATAACGAAAATTGCTTTT 60.095 33.333 0.00 0.00 37.28 2.27
612 613 6.367695 GCCAACCTAATAACGAAAATTGCTTT 59.632 34.615 0.00 0.00 0.00 3.51
613 614 5.867174 GCCAACCTAATAACGAAAATTGCTT 59.133 36.000 0.00 0.00 0.00 3.91
614 615 5.185056 AGCCAACCTAATAACGAAAATTGCT 59.815 36.000 0.00 0.00 0.00 3.91
615 616 5.407502 AGCCAACCTAATAACGAAAATTGC 58.592 37.500 0.00 0.00 0.00 3.56
618 619 9.623000 ACTTATAGCCAACCTAATAACGAAAAT 57.377 29.630 0.00 0.00 0.00 1.82
619 620 8.885722 CACTTATAGCCAACCTAATAACGAAAA 58.114 33.333 0.00 0.00 0.00 2.29
620 621 7.011669 GCACTTATAGCCAACCTAATAACGAAA 59.988 37.037 0.00 0.00 0.00 3.46
621 622 6.480981 GCACTTATAGCCAACCTAATAACGAA 59.519 38.462 0.00 0.00 0.00 3.85
622 623 5.987347 GCACTTATAGCCAACCTAATAACGA 59.013 40.000 0.00 0.00 0.00 3.85
623 624 5.107607 CGCACTTATAGCCAACCTAATAACG 60.108 44.000 0.00 0.00 0.00 3.18
624 625 5.987347 TCGCACTTATAGCCAACCTAATAAC 59.013 40.000 0.00 0.00 0.00 1.89
625 626 5.987347 GTCGCACTTATAGCCAACCTAATAA 59.013 40.000 0.00 0.00 0.00 1.40
626 627 5.069383 TGTCGCACTTATAGCCAACCTAATA 59.931 40.000 0.00 0.00 0.00 0.98
627 628 4.141801 TGTCGCACTTATAGCCAACCTAAT 60.142 41.667 0.00 0.00 0.00 1.73
628 629 3.196039 TGTCGCACTTATAGCCAACCTAA 59.804 43.478 0.00 0.00 0.00 2.69
629 630 2.761767 TGTCGCACTTATAGCCAACCTA 59.238 45.455 0.00 0.00 0.00 3.08
630 631 1.553248 TGTCGCACTTATAGCCAACCT 59.447 47.619 0.00 0.00 0.00 3.50
631 632 2.018542 TGTCGCACTTATAGCCAACC 57.981 50.000 0.00 0.00 0.00 3.77
632 633 2.095372 GGTTGTCGCACTTATAGCCAAC 59.905 50.000 0.00 0.00 35.09 3.77
633 634 2.352388 GGTTGTCGCACTTATAGCCAA 58.648 47.619 0.00 0.00 0.00 4.52
634 635 1.406341 GGGTTGTCGCACTTATAGCCA 60.406 52.381 0.00 0.00 0.00 4.75
635 636 1.296727 GGGTTGTCGCACTTATAGCC 58.703 55.000 0.00 0.00 0.00 3.93
636 637 0.928229 CGGGTTGTCGCACTTATAGC 59.072 55.000 0.00 0.00 0.00 2.97
637 638 2.288961 ACGGGTTGTCGCACTTATAG 57.711 50.000 0.00 0.00 0.00 1.31
638 639 4.557296 GCTATACGGGTTGTCGCACTTATA 60.557 45.833 0.00 0.00 0.00 0.98
639 640 2.973694 ATACGGGTTGTCGCACTTAT 57.026 45.000 0.00 0.00 0.00 1.73
640 641 2.480073 GCTATACGGGTTGTCGCACTTA 60.480 50.000 0.00 0.00 0.00 2.24
641 642 1.738030 GCTATACGGGTTGTCGCACTT 60.738 52.381 0.00 0.00 0.00 3.16
642 643 0.179119 GCTATACGGGTTGTCGCACT 60.179 55.000 0.00 0.00 0.00 4.40
643 644 0.179119 AGCTATACGGGTTGTCGCAC 60.179 55.000 0.00 0.00 0.00 5.34
644 645 0.179121 CAGCTATACGGGTTGTCGCA 60.179 55.000 0.00 0.00 0.00 5.10
645 646 0.101759 TCAGCTATACGGGTTGTCGC 59.898 55.000 0.00 0.00 0.00 5.19
646 647 1.404391 AGTCAGCTATACGGGTTGTCG 59.596 52.381 0.00 0.00 0.00 4.35
647 648 2.165845 ACAGTCAGCTATACGGGTTGTC 59.834 50.000 0.00 0.00 0.00 3.18
648 649 2.176889 ACAGTCAGCTATACGGGTTGT 58.823 47.619 0.00 0.00 0.00 3.32
649 650 2.930040 CAACAGTCAGCTATACGGGTTG 59.070 50.000 16.77 16.77 33.76 3.77
650 651 2.093658 CCAACAGTCAGCTATACGGGTT 60.094 50.000 0.00 0.00 0.00 4.11
651 652 1.480954 CCAACAGTCAGCTATACGGGT 59.519 52.381 0.00 0.00 0.00 5.28
652 653 1.480954 ACCAACAGTCAGCTATACGGG 59.519 52.381 0.00 0.00 0.00 5.28
653 654 2.961526 ACCAACAGTCAGCTATACGG 57.038 50.000 0.00 0.00 0.00 4.02
654 655 6.736123 AGTATAACCAACAGTCAGCTATACG 58.264 40.000 0.00 0.00 0.00 3.06
659 660 8.943909 GTTAATAGTATAACCAACAGTCAGCT 57.056 34.615 0.00 0.00 31.06 4.24
676 677 9.224267 CTGCATTATTAGAGCATGGTTAATAGT 57.776 33.333 0.00 4.44 37.68 2.12
677 678 8.180267 GCTGCATTATTAGAGCATGGTTAATAG 58.820 37.037 0.00 0.00 37.68 1.73
678 679 7.884877 AGCTGCATTATTAGAGCATGGTTAATA 59.115 33.333 1.02 7.07 37.68 0.98
679 680 6.718454 AGCTGCATTATTAGAGCATGGTTAAT 59.282 34.615 1.02 7.97 37.68 1.40
680 681 6.064060 AGCTGCATTATTAGAGCATGGTTAA 58.936 36.000 1.02 0.68 37.68 2.01
681 682 5.624159 AGCTGCATTATTAGAGCATGGTTA 58.376 37.500 1.02 0.00 37.68 2.85
688 689 3.745458 GGTGAGAGCTGCATTATTAGAGC 59.255 47.826 1.02 0.00 0.00 4.09
691 692 5.350914 GCTATGGTGAGAGCTGCATTATTAG 59.649 44.000 1.02 0.00 33.35 1.73
699 700 1.593750 CGGCTATGGTGAGAGCTGC 60.594 63.158 0.00 0.00 36.04 5.25
707 708 0.179084 ACATTCGGACGGCTATGGTG 60.179 55.000 0.00 0.00 0.00 4.17
710 711 1.860950 CTCAACATTCGGACGGCTATG 59.139 52.381 0.00 0.00 0.00 2.23
717 718 2.555199 CCAGATCCTCAACATTCGGAC 58.445 52.381 0.00 0.00 0.00 4.79
756 757 4.826733 TGACACAATGCTTCATGGTAGTTT 59.173 37.500 0.00 0.00 0.00 2.66
770 771 8.424274 TGCTACTATTGACTATTGACACAATG 57.576 34.615 7.16 1.37 35.19 2.82
793 799 4.034510 CCGTATCCTCAACTTTCTTCATGC 59.965 45.833 0.00 0.00 0.00 4.06
1105 1116 1.187567 TCTGCTACTCTGCTGCCACA 61.188 55.000 0.00 0.00 32.95 4.17
1107 1118 1.895966 CTCTGCTACTCTGCTGCCA 59.104 57.895 0.00 0.00 32.95 4.92
1108 1119 1.521234 GCTCTGCTACTCTGCTGCC 60.521 63.158 0.00 0.00 32.95 4.85
1114 1125 1.781025 CGCGCTAGCTCTGCTACTCT 61.781 60.000 13.93 0.00 40.44 3.24
1115 1126 1.369930 CGCGCTAGCTCTGCTACTC 60.370 63.158 13.93 0.00 40.44 2.59
1269 1280 2.235402 GGGGGAAAATCTCGAGTGTACA 59.765 50.000 13.13 0.00 0.00 2.90
1321 1332 7.961283 GTCAAATCCAAGAAAAGGTACGATAAC 59.039 37.037 0.00 0.00 0.00 1.89
1327 1338 6.801862 CGAATGTCAAATCCAAGAAAAGGTAC 59.198 38.462 0.00 0.00 0.00 3.34
1331 1342 5.570589 GCTCGAATGTCAAATCCAAGAAAAG 59.429 40.000 0.00 0.00 0.00 2.27
1344 1355 1.980951 GCATTGCGGCTCGAATGTCA 61.981 55.000 11.61 0.00 31.97 3.58
1521 1535 2.630317 GCTGGATTCAGATGCGCG 59.370 61.111 4.75 0.00 43.49 6.86
1541 1555 4.760047 CTTGTCCGCCCGACCTGG 62.760 72.222 0.00 0.00 41.18 4.45
1542 1556 4.760047 CCTTGTCCGCCCGACCTG 62.760 72.222 0.00 0.00 41.18 4.00
1587 1601 4.321718 TGGTTCATGAAAAGCAGAGAGAG 58.678 43.478 10.35 0.00 33.10 3.20
1588 1602 4.356405 TGGTTCATGAAAAGCAGAGAGA 57.644 40.909 10.35 0.00 33.10 3.10
1589 1603 5.443185 TTTGGTTCATGAAAAGCAGAGAG 57.557 39.130 10.35 0.00 37.86 3.20
1634 1651 4.385447 ACCACAAATTTGCATCGAAATTCG 59.615 37.500 18.12 9.38 42.10 3.34
1660 1677 1.010797 CCGCCGATGCAAGAAATCG 60.011 57.895 0.00 0.00 45.08 3.34
1692 1709 7.013846 CACCAAAACCTAGAAATTTCTGTACCA 59.986 37.037 27.37 8.93 38.19 3.25
1809 1830 3.853831 TTATGCGTAAAGTCGAGTGGA 57.146 42.857 0.00 0.00 0.00 4.02
1823 1844 1.674764 TTGGGGCTTGGCATTATGCG 61.675 55.000 11.28 0.00 46.21 4.73
1877 1898 3.319405 ACGGCAATGTGTTTAATGGACAA 59.681 39.130 0.00 0.00 0.00 3.18
1939 1960 8.406297 TGCAATGTATACAAAGTTACAAACACA 58.594 29.630 10.14 0.00 32.46 3.72
1949 1970 5.772672 TGAACCCTTGCAATGTATACAAAGT 59.227 36.000 10.14 0.00 0.00 2.66
1950 1971 6.266168 TGAACCCTTGCAATGTATACAAAG 57.734 37.500 10.14 8.68 0.00 2.77
1952 1973 6.040955 TGTTTGAACCCTTGCAATGTATACAA 59.959 34.615 10.14 6.09 0.00 2.41
1953 1974 5.536538 TGTTTGAACCCTTGCAATGTATACA 59.463 36.000 8.27 8.27 0.00 2.29
1954 1975 5.861787 GTGTTTGAACCCTTGCAATGTATAC 59.138 40.000 0.00 0.00 0.00 1.47
1956 1977 4.262420 GGTGTTTGAACCCTTGCAATGTAT 60.262 41.667 0.00 0.00 33.79 2.29
1957 1978 3.068873 GGTGTTTGAACCCTTGCAATGTA 59.931 43.478 0.00 0.00 33.79 2.29
1958 1979 2.158971 GGTGTTTGAACCCTTGCAATGT 60.159 45.455 0.00 0.00 33.79 2.71
1989 2011 0.606401 CACTGCACAGGGTAAGGGTG 60.606 60.000 2.21 0.00 35.68 4.61
2083 2105 1.478654 GGTGCAGGGGAAAGAACTGAA 60.479 52.381 0.00 0.00 34.21 3.02
2084 2106 0.110486 GGTGCAGGGGAAAGAACTGA 59.890 55.000 0.00 0.00 34.21 3.41
2085 2107 0.178992 TGGTGCAGGGGAAAGAACTG 60.179 55.000 0.00 0.00 35.40 3.16
2086 2108 0.111253 CTGGTGCAGGGGAAAGAACT 59.889 55.000 0.00 0.00 0.00 3.01
2150 2172 9.507329 ACCTGTAATTACCATTTATATGCAGAG 57.493 33.333 13.01 0.00 0.00 3.35
2196 2218 6.041637 TGGTATGTCACAGACAGAAAAGTACT 59.958 38.462 4.66 0.00 46.04 2.73
2197 2219 6.220930 TGGTATGTCACAGACAGAAAAGTAC 58.779 40.000 4.66 2.70 46.04 2.73
2198 2220 6.413783 TGGTATGTCACAGACAGAAAAGTA 57.586 37.500 4.66 0.00 46.04 2.24
2199 2221 5.290493 TGGTATGTCACAGACAGAAAAGT 57.710 39.130 4.66 0.00 46.04 2.66
2210 2233 8.676401 CACAGAAAATAATCATGGTATGTCACA 58.324 33.333 0.00 0.00 0.00 3.58
2219 2242 7.389803 TGGTACACACAGAAAATAATCATGG 57.610 36.000 0.00 0.00 0.00 3.66
2380 2403 2.634982 TGTCTTTCAAATGATGGCGC 57.365 45.000 0.00 0.00 0.00 6.53
2382 2405 4.525912 ACCTTGTCTTTCAAATGATGGC 57.474 40.909 0.00 0.00 35.48 4.40
2431 2454 7.976175 TCATTCAGTACTAACAGTAAGATGCAG 59.024 37.037 0.00 0.00 31.62 4.41
2432 2455 7.836842 TCATTCAGTACTAACAGTAAGATGCA 58.163 34.615 0.00 0.00 31.62 3.96
2433 2456 8.191446 TCTCATTCAGTACTAACAGTAAGATGC 58.809 37.037 0.00 0.00 31.62 3.91
2455 2483 4.500887 GGCAGGCGTATTAGTGTTATCTCA 60.501 45.833 0.00 0.00 0.00 3.27
2605 2633 5.091552 TCAACTCTAGGGAACAACTGGTAT 58.908 41.667 0.00 0.00 0.00 2.73
2845 2873 5.911280 AGGATAATGAACATACGTTACGTCG 59.089 40.000 15.39 9.73 41.54 5.12
2931 2959 7.966246 TGTGATCAAATAAAGCAAGCAAAAT 57.034 28.000 0.00 0.00 0.00 1.82
3073 3101 6.925165 AGCAATTATGGCGATAATTTTGGAAG 59.075 34.615 20.27 11.45 41.09 3.46
3074 3102 6.815089 AGCAATTATGGCGATAATTTTGGAA 58.185 32.000 20.27 0.00 41.09 3.53
3114 3142 5.524646 AGATGCCAAAACACATCAAAACAAG 59.475 36.000 5.84 0.00 44.16 3.16
3124 3152 1.962100 TGATGCAGATGCCAAAACACA 59.038 42.857 1.72 0.00 41.18 3.72
3125 3153 2.728690 TGATGCAGATGCCAAAACAC 57.271 45.000 1.72 0.00 41.18 3.32
3152 3180 1.335597 GGCTTTTGGCGTCCTTTGTAC 60.336 52.381 0.00 0.00 42.94 2.90
3181 3209 3.189080 TGACGAATTTGAAGCATGACCAG 59.811 43.478 0.00 0.00 0.00 4.00
3316 3347 5.499004 AGAATTTGTACAGTCAAGGCCTA 57.501 39.130 5.16 0.00 0.00 3.93
3355 3386 1.123077 CCTGGTGCATAGTGGCTAGA 58.877 55.000 0.00 0.00 34.04 2.43
3361 3392 2.425143 ATTGTCCCTGGTGCATAGTG 57.575 50.000 0.00 0.00 0.00 2.74
3467 3501 4.517453 GTCGAGCTAGTCATACTGGAGAAT 59.483 45.833 0.00 0.00 0.00 2.40
3509 3543 1.146263 GCGTGGGCAGGTAGCTATT 59.854 57.895 0.00 0.00 44.79 1.73
3524 3558 2.288579 TGAGAATGTCTTAACCGTGCGT 60.289 45.455 0.00 0.00 0.00 5.24
3782 3816 4.184629 CAAGCTCGAATACTAAGCACCTT 58.815 43.478 0.00 0.00 38.51 3.50
3883 3922 4.498177 GCACTTTGGAGGTGAAGTTTCTTC 60.498 45.833 2.95 2.95 36.89 2.87
3893 3932 1.102154 TGTTGTGCACTTTGGAGGTG 58.898 50.000 19.41 0.00 37.70 4.00
3904 3943 1.269174 GGTGCATATGTGTGTTGTGCA 59.731 47.619 4.29 0.00 42.86 4.57
3906 3945 4.635324 TGATAGGTGCATATGTGTGTTGTG 59.365 41.667 4.29 0.00 0.00 3.33
3914 3953 4.904895 AGCAGATGATAGGTGCATATGT 57.095 40.909 4.29 0.00 39.80 2.29
3945 3984 2.161609 CCTGAGGTTTTTATGTGCCGAC 59.838 50.000 0.00 0.00 0.00 4.79
3947 3986 2.432444 TCCTGAGGTTTTTATGTGCCG 58.568 47.619 0.00 0.00 0.00 5.69
3952 3991 7.031975 GCAGAGAATTTCCTGAGGTTTTTATG 58.968 38.462 15.05 0.00 32.37 1.90
3962 4001 8.049117 ACATATTTACAGCAGAGAATTTCCTGA 58.951 33.333 15.05 0.00 32.37 3.86
3976 4015 7.697691 ACAGAAGCACATTACATATTTACAGC 58.302 34.615 0.00 0.00 0.00 4.40
4019 4065 4.287067 TCAAGTGGGCCATAGATCTTATCC 59.713 45.833 10.70 0.00 0.00 2.59
4025 4071 3.471680 GAAGTCAAGTGGGCCATAGATC 58.528 50.000 10.70 0.00 0.00 2.75
4028 4074 1.207089 TCGAAGTCAAGTGGGCCATAG 59.793 52.381 10.70 2.55 0.00 2.23
4103 4149 3.909427 ATAACATGGGGATTGGCATCT 57.091 42.857 0.00 0.00 0.00 2.90
4127 4173 2.760634 TGCTAGCCTTGAAATCACGA 57.239 45.000 13.29 0.00 0.00 4.35
4217 4263 2.606725 CTGAGTGGAAATGTGCTCGATC 59.393 50.000 0.00 0.00 0.00 3.69
4241 4287 5.703730 AATCTTACCCGAAAGTTCCCATA 57.296 39.130 0.00 0.00 0.00 2.74
4263 4309 1.675714 CGATGGCAGTAACAGCAGGAA 60.676 52.381 0.00 0.00 0.00 3.36
4287 4333 0.102481 AGGCGCGGTGTATTACTCTG 59.898 55.000 8.83 1.19 0.00 3.35
4305 4351 8.159344 ACTCAACAAGGATTCAAAGAAACTAG 57.841 34.615 0.00 0.00 0.00 2.57
4306 4352 8.519799 AACTCAACAAGGATTCAAAGAAACTA 57.480 30.769 0.00 0.00 0.00 2.24
4326 4372 4.576873 TGCAAATAGTCCGTTCAAAACTCA 59.423 37.500 0.00 0.00 0.00 3.41
4337 4383 2.288961 ACGTACCTGCAAATAGTCCG 57.711 50.000 0.00 0.00 0.00 4.79
4338 4384 2.095372 GCAACGTACCTGCAAATAGTCC 59.905 50.000 5.84 0.00 39.69 3.85
4340 4386 2.081462 GGCAACGTACCTGCAAATAGT 58.919 47.619 12.42 0.00 41.78 2.12
4341 4387 1.400494 GGGCAACGTACCTGCAAATAG 59.600 52.381 12.42 0.00 41.78 1.73
4387 4441 0.384309 ACACGTCGCTCTTGACAAGA 59.616 50.000 16.86 16.86 38.84 3.02
4513 4567 3.966543 AGGCCTTCCCGGTTGGTG 61.967 66.667 0.00 0.00 39.21 4.17
5061 5130 3.002791 CTCTCTCTCTCGGCTGCTATAG 58.997 54.545 0.00 0.00 0.00 1.31
5062 5131 2.635427 TCTCTCTCTCTCGGCTGCTATA 59.365 50.000 0.00 0.00 0.00 1.31
5063 5132 1.419762 TCTCTCTCTCTCGGCTGCTAT 59.580 52.381 0.00 0.00 0.00 2.97
5098 5170 3.994392 CGCGGGCTATACAATTACAGAAT 59.006 43.478 0.00 0.00 0.00 2.40
5133 5221 2.215907 ATCGGATCGACAAGAAGCAG 57.784 50.000 0.00 0.00 39.18 4.24
5134 5222 2.672961 AATCGGATCGACAAGAAGCA 57.327 45.000 0.00 0.00 39.18 3.91
5135 5223 3.370978 TCAAAATCGGATCGACAAGAAGC 59.629 43.478 0.00 0.00 39.18 3.86
5142 5230 1.858458 TCGCATCAAAATCGGATCGAC 59.142 47.619 0.00 0.00 39.18 4.20
5277 5378 3.255969 TCGGTTAGGGATGCTGTAAAC 57.744 47.619 0.00 0.00 0.00 2.01
5280 5381 1.611977 CGATCGGTTAGGGATGCTGTA 59.388 52.381 7.38 0.00 0.00 2.74
5281 5382 0.389391 CGATCGGTTAGGGATGCTGT 59.611 55.000 7.38 0.00 0.00 4.40
5282 5383 0.389391 ACGATCGGTTAGGGATGCTG 59.611 55.000 20.98 0.00 0.00 4.41
5283 5384 1.120530 AACGATCGGTTAGGGATGCT 58.879 50.000 20.98 0.00 37.00 3.79
5284 5385 1.202486 TCAACGATCGGTTAGGGATGC 60.202 52.381 20.98 0.00 36.49 3.91
5300 5401 1.220477 GCTCCTCAGAGGCCTCAAC 59.780 63.158 33.90 8.89 40.79 3.18
5311 5412 4.578928 GTGGAGTAAAAGTTTTGCTCCTCA 59.421 41.667 40.91 29.78 40.64 3.86
5312 5413 4.319549 CGTGGAGTAAAAGTTTTGCTCCTC 60.320 45.833 40.91 37.60 40.64 3.71
5331 5432 4.803426 GAGTCGAGGCAGCCGTGG 62.803 72.222 5.55 0.00 0.00 4.94
5332 5433 3.691744 GAGAGTCGAGGCAGCCGTG 62.692 68.421 5.55 2.23 0.00 4.94
5333 5434 3.444805 GAGAGTCGAGGCAGCCGT 61.445 66.667 5.55 0.00 0.00 5.68
5334 5435 4.544689 CGAGAGTCGAGGCAGCCG 62.545 72.222 5.55 0.00 43.74 5.52
5335 5436 3.134792 TCGAGAGTCGAGGCAGCC 61.135 66.667 1.84 1.84 44.82 4.85
5351 5452 0.669625 GTGGGCGGCCGAGTATATTC 60.670 60.000 33.48 8.16 0.00 1.75
5376 5477 7.686127 GCGGGATGAAGAGGAAAAGTTATACTA 60.686 40.741 0.00 0.00 0.00 1.82
5384 5485 1.009829 CGCGGGATGAAGAGGAAAAG 58.990 55.000 0.00 0.00 0.00 2.27
5418 5521 3.399181 GACGATGCAGGGTGGGGA 61.399 66.667 0.00 0.00 0.00 4.81
5423 5526 4.129737 CCGTCGACGATGCAGGGT 62.130 66.667 37.65 0.00 43.02 4.34
5453 5556 1.926511 GCAGAGGCAAATGGTGGTCG 61.927 60.000 0.00 0.00 40.72 4.79
5501 5604 1.872197 GAGCGTCTCAGAGTGTGGCT 61.872 60.000 0.00 2.45 0.00 4.75
5536 5639 1.269778 CGATAGAGCTTGATTCCGGCA 60.270 52.381 0.00 0.00 39.76 5.69
5582 5688 3.357079 CTGGTGTGTGCTTCCGGC 61.357 66.667 0.00 0.00 42.22 6.13
5583 5689 1.003355 ATCTGGTGTGTGCTTCCGG 60.003 57.895 0.00 0.00 0.00 5.14
5625 5734 2.125147 CTTCGAGATGCCCGGCAA 60.125 61.111 18.00 0.00 43.62 4.52
5649 5758 1.986413 CCCAAGCTGCTAGTGGTCT 59.014 57.895 16.88 0.00 0.00 3.85
5722 5831 0.824109 CTCACCTAGGCAATCCGTCA 59.176 55.000 9.30 0.00 37.47 4.35
5782 5895 7.540474 TCTACAGTTGAAATGACTAGGTTCT 57.460 36.000 0.00 0.00 0.00 3.01
5966 6079 5.280215 CCTTACATGGCCTCCTATCCTTTAG 60.280 48.000 3.32 0.00 0.00 1.85
6017 6130 1.135915 CTCGGTGAAGGATGAGGTGAG 59.864 57.143 0.00 0.00 0.00 3.51
6018 6131 1.186200 CTCGGTGAAGGATGAGGTGA 58.814 55.000 0.00 0.00 0.00 4.02
6019 6132 0.898320 ACTCGGTGAAGGATGAGGTG 59.102 55.000 0.00 0.00 32.76 4.00
6069 6182 1.499502 GAGCAGAAACTCCTTGCGC 59.500 57.895 0.00 0.00 0.00 6.09
6089 6202 2.483106 CCATAGGATGCATTTGAGCTCG 59.517 50.000 9.64 0.00 34.99 5.03
6127 6241 8.600625 GCACGTATGTCAAAATAATCAGAACTA 58.399 33.333 0.00 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.