Multiple sequence alignment - TraesCS2D01G360800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G360800 chr2D 100.000 5362 0 0 1 5362 462782887 462788248 0.000000e+00 9902.0
1 TraesCS2D01G360800 chr2D 82.185 2178 279 69 1724 3845 462245770 462247894 0.000000e+00 1772.0
2 TraesCS2D01G360800 chr2D 81.069 655 81 23 217 853 54668400 54667771 2.900000e-132 483.0
3 TraesCS2D01G360800 chr2D 86.885 244 29 3 902 1145 462263840 462264080 2.460000e-68 270.0
4 TraesCS2D01G360800 chr2D 79.781 366 51 10 3288 3645 462785639 462785989 1.490000e-60 244.0
5 TraesCS2D01G360800 chr2D 79.781 366 51 10 2753 3103 462786174 462786531 1.490000e-60 244.0
6 TraesCS2D01G360800 chr2D 79.301 372 49 17 3288 3645 462246804 462247161 8.980000e-58 235.0
7 TraesCS2D01G360800 chr2D 90.780 141 6 3 4963 5100 462787453 462787589 1.190000e-41 182.0
8 TraesCS2D01G360800 chr2D 90.780 141 6 3 4567 4703 462787849 462787986 1.190000e-41 182.0
9 TraesCS2D01G360800 chr2D 82.990 194 18 5 1196 1377 462245424 462245614 1.550000e-35 161.0
10 TraesCS2D01G360800 chr2D 94.118 85 5 0 1484 1568 462245678 462245762 4.360000e-26 130.0
11 TraesCS2D01G360800 chr2D 86.842 76 8 2 2048 2122 462245687 462245761 3.440000e-12 84.2
12 TraesCS2D01G360800 chr2B 91.241 4133 243 61 899 4966 545226205 545230283 0.000000e+00 5517.0
13 TraesCS2D01G360800 chr2B 86.811 417 44 3 2307 2721 545159043 545159450 6.330000e-124 455.0
14 TraesCS2D01G360800 chr2B 83.010 412 49 11 1722 2122 545158577 545158978 2.380000e-93 353.0
15 TraesCS2D01G360800 chr2B 82.890 263 39 6 3746 4003 545159893 545160154 1.160000e-56 231.0
16 TraesCS2D01G360800 chr2B 84.018 219 29 5 3309 3526 545159563 545159776 7.040000e-49 206.0
17 TraesCS2D01G360800 chr2B 94.186 86 5 0 1484 1569 545158487 545158572 1.210000e-26 132.0
18 TraesCS2D01G360800 chr2B 86.842 76 8 2 2048 2122 545158496 545158570 3.440000e-12 84.2
19 TraesCS2D01G360800 chr2A 88.927 2646 211 35 1110 3720 607597439 607600037 0.000000e+00 3188.0
20 TraesCS2D01G360800 chr2A 87.853 1169 75 32 3722 4866 607600123 607601248 0.000000e+00 1310.0
21 TraesCS2D01G360800 chr2A 82.961 1074 122 31 2212 3265 607518952 607519984 0.000000e+00 913.0
22 TraesCS2D01G360800 chr2A 83.067 815 108 17 1722 2517 610210579 610211382 0.000000e+00 713.0
23 TraesCS2D01G360800 chr2A 84.098 610 72 16 2652 3250 610225940 610226535 2.800000e-157 566.0
24 TraesCS2D01G360800 chr2A 83.795 469 46 18 3384 3845 607520249 607520694 8.310000e-113 418.0
25 TraesCS2D01G360800 chr2A 82.889 450 63 6 1718 2156 607518354 607518800 5.030000e-105 392.0
26 TraesCS2D01G360800 chr2A 79.406 505 71 19 217 713 607871854 607872333 5.180000e-85 326.0
27 TraesCS2D01G360800 chr2A 93.939 198 7 2 900 1093 607596915 607597111 1.460000e-75 294.0
28 TraesCS2D01G360800 chr2A 81.443 388 37 15 1006 1377 607517834 607518202 8.790000e-73 285.0
29 TraesCS2D01G360800 chr2A 84.064 251 22 10 3595 3845 610227186 610227418 5.400000e-55 226.0
30 TraesCS2D01G360800 chr2A 91.304 138 8 2 4963 5100 607600955 607601088 9.170000e-43 185.0
31 TraesCS2D01G360800 chr2A 91.860 86 7 0 1484 1569 607518268 607518353 2.620000e-23 121.0
32 TraesCS2D01G360800 chr2A 92.771 83 6 0 1487 1569 610210492 610210574 2.620000e-23 121.0
33 TraesCS2D01G360800 chr7D 94.411 841 34 9 3 835 159351185 159352020 0.000000e+00 1280.0
34 TraesCS2D01G360800 chr7D 79.333 600 77 42 84 666 400189975 400190544 1.410000e-100 377.0
35 TraesCS2D01G360800 chr3B 93.155 862 48 7 3 856 708229605 708228747 0.000000e+00 1254.0
36 TraesCS2D01G360800 chr3B 76.788 853 135 51 35 853 319033740 319034563 2.310000e-113 420.0
37 TraesCS2D01G360800 chr3B 88.073 109 12 1 747 854 225261112 225261220 1.570000e-25 128.0
38 TraesCS2D01G360800 chr1B 89.578 854 49 16 3 853 170838143 170838959 0.000000e+00 1048.0
39 TraesCS2D01G360800 chr1B 74.236 458 68 27 2306 2733 656674603 656675040 4.330000e-31 147.0
40 TraesCS2D01G360800 chr5A 77.805 802 134 31 86 853 607624722 607625513 6.330000e-124 455.0
41 TraesCS2D01G360800 chr5A 90.625 96 9 0 2870 2965 12541237 12541332 1.570000e-25 128.0
42 TraesCS2D01G360800 chr5A 94.048 84 5 0 5279 5362 439432888 439432805 1.570000e-25 128.0
43 TraesCS2D01G360800 chr4A 75.854 849 151 41 38 854 718148137 718147311 3.030000e-102 383.0
44 TraesCS2D01G360800 chr6B 76.010 842 138 40 39 853 202506641 202505837 1.410000e-100 377.0
45 TraesCS2D01G360800 chr6B 77.015 335 56 19 154 476 705287396 705287721 7.140000e-39 172.0
46 TraesCS2D01G360800 chr6B 92.424 66 5 0 2320 2385 176767502 176767437 1.590000e-15 95.3
47 TraesCS2D01G360800 chr6B 90.000 70 6 1 1848 1917 121782596 121782528 7.400000e-14 89.8
48 TraesCS2D01G360800 chr1D 83.065 372 44 16 203 567 419421613 419421972 2.410000e-83 320.0
49 TraesCS2D01G360800 chr1D 95.238 84 4 0 5279 5362 388980010 388979927 3.370000e-27 134.0
50 TraesCS2D01G360800 chr1D 83.158 95 10 4 5100 5189 449976355 449976448 1.240000e-11 82.4
51 TraesCS2D01G360800 chr5B 83.077 260 37 6 601 855 444768680 444768937 4.180000e-56 230.0
52 TraesCS2D01G360800 chr5B 88.050 159 13 5 427 582 444768412 444768567 3.300000e-42 183.0
53 TraesCS2D01G360800 chr5B 90.625 96 9 0 2870 2965 13841837 13841932 1.570000e-25 128.0
54 TraesCS2D01G360800 chr5B 74.394 289 52 18 38 315 704407176 704406899 2.640000e-18 104.0
55 TraesCS2D01G360800 chrUn 81.008 258 31 15 201 451 66490929 66490683 7.090000e-44 189.0
56 TraesCS2D01G360800 chrUn 81.008 258 31 15 201 451 314201151 314200905 7.090000e-44 189.0
57 TraesCS2D01G360800 chr5D 76.370 292 45 19 36 315 558336800 558337079 9.370000e-28 135.0
58 TraesCS2D01G360800 chr5D 94.048 84 5 0 5279 5362 338395748 338395665 1.570000e-25 128.0
59 TraesCS2D01G360800 chr4D 91.579 95 8 0 2870 2964 432946377 432946471 1.210000e-26 132.0
60 TraesCS2D01G360800 chr4D 89.855 69 6 1 1848 1916 432948941 432949008 2.660000e-13 87.9
61 TraesCS2D01G360800 chr1A 90.000 80 7 1 2306 2385 566414542 566414620 9.500000e-18 102.0
62 TraesCS2D01G360800 chr4B 90.411 73 6 1 2313 2385 531067803 531067874 1.590000e-15 95.3
63 TraesCS2D01G360800 chr4B 89.855 69 6 1 1848 1916 531068564 531068631 2.660000e-13 87.9
64 TraesCS2D01G360800 chr6D 89.855 69 6 1 1848 1916 292399063 292399130 2.660000e-13 87.9
65 TraesCS2D01G360800 chr6D 89.855 69 6 1 1848 1916 462703649 462703716 2.660000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G360800 chr2D 462782887 462788248 5361 False 2150.800000 9902 88.224400 1 5362 5 chr2D.!!$F3 5361
1 TraesCS2D01G360800 chr2D 54667771 54668400 629 True 483.000000 483 81.069000 217 853 1 chr2D.!!$R1 636
2 TraesCS2D01G360800 chr2D 462245424 462247894 2470 False 476.440000 1772 85.087200 1196 3845 5 chr2D.!!$F2 2649
3 TraesCS2D01G360800 chr2B 545226205 545230283 4078 False 5517.000000 5517 91.241000 899 4966 1 chr2B.!!$F1 4067
4 TraesCS2D01G360800 chr2B 545158487 545160154 1667 False 243.533333 455 86.292833 1484 4003 6 chr2B.!!$F2 2519
5 TraesCS2D01G360800 chr2A 607596915 607601248 4333 False 1244.250000 3188 90.505750 900 5100 4 chr2A.!!$F3 4200
6 TraesCS2D01G360800 chr2A 607517834 607520694 2860 False 425.800000 913 84.589600 1006 3845 5 chr2A.!!$F2 2839
7 TraesCS2D01G360800 chr2A 610210492 610211382 890 False 417.000000 713 87.919000 1487 2517 2 chr2A.!!$F4 1030
8 TraesCS2D01G360800 chr2A 610225940 610227418 1478 False 396.000000 566 84.081000 2652 3845 2 chr2A.!!$F5 1193
9 TraesCS2D01G360800 chr7D 159351185 159352020 835 False 1280.000000 1280 94.411000 3 835 1 chr7D.!!$F1 832
10 TraesCS2D01G360800 chr7D 400189975 400190544 569 False 377.000000 377 79.333000 84 666 1 chr7D.!!$F2 582
11 TraesCS2D01G360800 chr3B 708228747 708229605 858 True 1254.000000 1254 93.155000 3 856 1 chr3B.!!$R1 853
12 TraesCS2D01G360800 chr3B 319033740 319034563 823 False 420.000000 420 76.788000 35 853 1 chr3B.!!$F2 818
13 TraesCS2D01G360800 chr1B 170838143 170838959 816 False 1048.000000 1048 89.578000 3 853 1 chr1B.!!$F1 850
14 TraesCS2D01G360800 chr5A 607624722 607625513 791 False 455.000000 455 77.805000 86 853 1 chr5A.!!$F2 767
15 TraesCS2D01G360800 chr4A 718147311 718148137 826 True 383.000000 383 75.854000 38 854 1 chr4A.!!$R1 816
16 TraesCS2D01G360800 chr6B 202505837 202506641 804 True 377.000000 377 76.010000 39 853 1 chr6B.!!$R3 814
17 TraesCS2D01G360800 chr5B 444768412 444768937 525 False 206.500000 230 85.563500 427 855 2 chr5B.!!$F2 428

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
890 1363 0.031616 AAGGAGCTCCCCAGGTCTAG 60.032 60.0 29.54 0.0 45.19 2.43 F
1093 1572 0.034186 CAAGTATGCTTGCCTCCCCA 60.034 55.0 10.75 0.0 44.54 4.96 F
1095 1574 0.475906 AGTATGCTTGCCTCCCCATC 59.524 55.0 0.00 0.0 0.00 3.51 F
1480 2286 0.679960 CCCCCAAATCCAACGAGTCC 60.680 60.0 0.00 0.0 0.00 3.85 F
3128 4113 0.536006 ACCACACTCTTGCAGCCTTC 60.536 55.0 0.00 0.0 0.00 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2124 2955 1.066605 CCTAGTGCAAATGCTCCATGC 59.933 52.381 6.97 0.0 42.66 4.06 R
2894 3868 0.251653 AGCGGACACTAAGACTGGGA 60.252 55.000 0.00 0.0 0.00 4.37 R
3021 4000 2.344535 GCACAGGGCACAAACTCAT 58.655 52.632 0.00 0.0 43.97 2.90 R
3201 4186 2.223377 CGACAAGGCAGGTAAAACAGAC 59.777 50.000 0.00 0.0 0.00 3.51 R
5016 6598 0.532115 CCAGGCAAGGGCATAACAAC 59.468 55.000 0.00 0.0 43.71 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
348 671 9.518906 AAATCTTTTCCAAATTTGTGATTTTGC 57.481 25.926 16.73 0.00 31.48 3.68
713 1174 3.874543 TCAAATCCCGGTATTCACGAATG 59.125 43.478 0.00 0.00 32.50 2.67
727 1189 9.477484 GTATTCACGAATGTCTACAGGAATAAT 57.523 33.333 2.48 0.00 30.49 1.28
848 1321 1.077930 TACAGCGCCGACTAGGAGT 60.078 57.895 2.29 0.00 45.00 3.85
856 1329 1.043673 CCGACTAGGAGTTCCCCAGG 61.044 65.000 0.00 0.00 45.00 4.45
857 1330 0.324460 CGACTAGGAGTTCCCCAGGT 60.324 60.000 0.00 0.00 36.42 4.00
858 1331 1.487300 GACTAGGAGTTCCCCAGGTC 58.513 60.000 0.00 0.00 36.42 3.85
859 1332 1.007359 GACTAGGAGTTCCCCAGGTCT 59.993 57.143 0.00 0.00 36.42 3.85
860 1333 1.007359 ACTAGGAGTTCCCCAGGTCTC 59.993 57.143 0.00 0.00 36.42 3.36
861 1334 1.007238 CTAGGAGTTCCCCAGGTCTCA 59.993 57.143 0.00 0.00 36.42 3.27
862 1335 0.193574 AGGAGTTCCCCAGGTCTCAA 59.806 55.000 0.00 0.00 36.42 3.02
863 1336 1.064825 GGAGTTCCCCAGGTCTCAAA 58.935 55.000 9.42 0.00 31.15 2.69
864 1337 1.423921 GGAGTTCCCCAGGTCTCAAAA 59.576 52.381 9.42 0.00 31.15 2.44
865 1338 2.158519 GGAGTTCCCCAGGTCTCAAAAA 60.159 50.000 9.42 0.00 31.15 1.94
886 1359 2.569100 AAAAAGGAGCTCCCCAGGT 58.431 52.632 29.54 7.47 36.42 4.00
887 1360 0.405973 AAAAAGGAGCTCCCCAGGTC 59.594 55.000 29.54 2.09 45.14 3.85
888 1361 0.476611 AAAAGGAGCTCCCCAGGTCT 60.477 55.000 29.54 5.79 45.19 3.85
889 1362 0.417841 AAAGGAGCTCCCCAGGTCTA 59.582 55.000 29.54 0.00 45.19 2.59
890 1363 0.031616 AAGGAGCTCCCCAGGTCTAG 60.032 60.000 29.54 0.00 45.19 2.43
891 1364 1.225403 AGGAGCTCCCCAGGTCTAGT 61.225 60.000 29.54 3.28 45.19 2.57
892 1365 0.325765 GGAGCTCCCCAGGTCTAGTT 60.326 60.000 23.19 0.00 45.19 2.24
893 1366 1.116308 GAGCTCCCCAGGTCTAGTTC 58.884 60.000 0.87 0.00 42.93 3.01
894 1367 0.413832 AGCTCCCCAGGTCTAGTTCA 59.586 55.000 0.00 0.00 0.00 3.18
895 1368 1.203313 AGCTCCCCAGGTCTAGTTCAA 60.203 52.381 0.00 0.00 0.00 2.69
896 1369 1.066071 GCTCCCCAGGTCTAGTTCAAC 60.066 57.143 0.00 0.00 0.00 3.18
897 1370 1.555533 CTCCCCAGGTCTAGTTCAACC 59.444 57.143 0.00 0.00 35.69 3.77
911 1384 7.173390 GTCTAGTTCAACCAACTGCTATTCTTT 59.827 37.037 0.00 0.00 45.60 2.52
912 1385 8.372459 TCTAGTTCAACCAACTGCTATTCTTTA 58.628 33.333 0.00 0.00 45.60 1.85
913 1386 7.203255 AGTTCAACCAACTGCTATTCTTTAC 57.797 36.000 0.00 0.00 44.28 2.01
914 1387 5.856126 TCAACCAACTGCTATTCTTTACG 57.144 39.130 0.00 0.00 0.00 3.18
915 1388 5.543714 TCAACCAACTGCTATTCTTTACGA 58.456 37.500 0.00 0.00 0.00 3.43
916 1389 5.637810 TCAACCAACTGCTATTCTTTACGAG 59.362 40.000 0.00 0.00 0.00 4.18
917 1390 5.148651 ACCAACTGCTATTCTTTACGAGT 57.851 39.130 0.00 0.00 0.00 4.18
918 1391 4.929808 ACCAACTGCTATTCTTTACGAGTG 59.070 41.667 0.00 0.00 0.00 3.51
919 1392 4.929808 CCAACTGCTATTCTTTACGAGTGT 59.070 41.667 0.00 0.00 0.00 3.55
920 1393 5.408604 CCAACTGCTATTCTTTACGAGTGTT 59.591 40.000 0.00 0.00 0.00 3.32
948 1426 1.847890 AACGCCGTTCCAATTGACCG 61.848 55.000 7.12 5.75 0.00 4.79
1093 1572 0.034186 CAAGTATGCTTGCCTCCCCA 60.034 55.000 10.75 0.00 44.54 4.96
1095 1574 0.475906 AGTATGCTTGCCTCCCCATC 59.524 55.000 0.00 0.00 0.00 3.51
1134 1924 7.419204 CCTTCAGAACTTAGGTTAGATCTACG 58.581 42.308 0.67 0.00 35.58 3.51
1181 1971 4.788100 GTCGTCGATTTGGTTTGATTGATG 59.212 41.667 0.00 0.00 0.00 3.07
1303 2105 1.434696 CCATTTCATGTGCCCTCGC 59.565 57.895 0.00 0.00 0.00 5.03
1359 2163 4.384940 TCTTACACACATGCTGCTGTTAA 58.615 39.130 0.00 0.00 0.00 2.01
1480 2286 0.679960 CCCCCAAATCCAACGAGTCC 60.680 60.000 0.00 0.00 0.00 3.85
1497 2309 1.218047 CCTCCGCGAAGGTGATGAA 59.782 57.895 8.23 0.00 41.99 2.57
1598 2411 3.769300 GGTTTCCCAAGAGGCAAACATAT 59.231 43.478 3.73 0.00 37.37 1.78
1599 2412 4.381932 GGTTTCCCAAGAGGCAAACATATG 60.382 45.833 0.00 0.00 37.37 1.78
1611 2424 6.707290 AGGCAAACATATGTACACTCTGTAA 58.293 36.000 9.21 0.00 34.21 2.41
1688 2502 3.327757 GGAATGGCCATCATAGACCTGTA 59.672 47.826 21.08 0.00 34.44 2.74
1700 2514 7.437713 TCATAGACCTGTAATGATTCTGGTT 57.562 36.000 7.30 3.06 36.34 3.67
1715 2529 4.083080 TCTGGTTGATAGGTTCCCCTAA 57.917 45.455 0.00 0.00 46.41 2.69
1734 2549 6.269077 CCCCTAATTTGAAGTAAACCAAAGGT 59.731 38.462 0.00 0.00 35.97 3.50
1801 2616 4.617223 GCTTTGATAGGCTCGTTTTGTTTC 59.383 41.667 0.00 0.00 0.00 2.78
1857 2675 4.454847 CAGTGACGAGTTCTTACAGACCTA 59.545 45.833 0.00 0.00 0.00 3.08
2015 2835 7.444183 TGTCCTTTCTCTTGTTTGACGATTATT 59.556 33.333 0.00 0.00 0.00 1.40
2124 2955 4.221703 AGAACATCTAAGGGACTGAGTGTG 59.778 45.833 0.00 0.00 38.36 3.82
2254 3198 3.928005 ATCTGATGACCTTGACTGCAT 57.072 42.857 0.00 0.00 0.00 3.96
2272 3219 4.267536 TGCATCTCTTTTCTGGAGAATGG 58.732 43.478 0.00 0.00 42.16 3.16
2274 3221 4.946157 GCATCTCTTTTCTGGAGAATGGAA 59.054 41.667 0.00 0.00 42.16 3.53
2323 3276 4.730949 AATTGTCAGAATTGCCATGGAG 57.269 40.909 18.40 0.00 0.00 3.86
2349 3302 6.180472 ACGGTGAAGATTGATATTTGGTCTT 58.820 36.000 0.00 0.00 32.23 3.01
2353 3306 8.956426 GGTGAAGATTGATATTTGGTCTTGTTA 58.044 33.333 0.00 0.00 29.89 2.41
2355 3308 8.677300 TGAAGATTGATATTTGGTCTTGTTAGC 58.323 33.333 0.00 0.00 29.89 3.09
2420 3373 7.232330 TCTCAGTCCTCCTATCACATTATCTTG 59.768 40.741 0.00 0.00 0.00 3.02
2458 3415 3.296322 TGTTTGTTTGGCCGATGATTC 57.704 42.857 0.00 0.00 0.00 2.52
2526 3483 8.416329 GTGGAAAGCATAATTATCAATGAGGTT 58.584 33.333 0.00 0.00 0.00 3.50
2550 3507 8.974408 GTTGAACTCTGTTTGTTTTTGTAGTTT 58.026 29.630 0.00 0.00 0.00 2.66
2591 3549 2.611751 TCGGGTGATGATTACAAATGCG 59.388 45.455 0.00 0.00 0.00 4.73
2624 3582 7.667219 AGATGACCAAACTGTGATTACTTGAAT 59.333 33.333 0.00 0.00 0.00 2.57
2634 3592 9.295825 ACTGTGATTACTTGAATAAAATGGTCA 57.704 29.630 0.00 0.00 0.00 4.02
2645 3603 9.699410 TTGAATAAAATGGTCATTCACTCCTAT 57.301 29.630 0.00 0.00 38.16 2.57
2700 3658 9.558396 TTGATTAAAATTGCATTTGAGAAACCT 57.442 25.926 0.00 0.00 31.77 3.50
2873 3847 3.765511 TCAGCAATGAATTTCCAAGAGGG 59.234 43.478 0.00 0.00 34.83 4.30
2894 3868 6.122277 AGGGTGATGATTTCATATTTGTCGT 58.878 36.000 0.00 0.00 36.54 4.34
2952 3926 6.018098 GCTGATTGACATACTTCTGAATCTGG 60.018 42.308 0.00 0.00 0.00 3.86
2969 3943 6.095860 TGAATCTGGCTCTGTAAATGAATTGG 59.904 38.462 0.00 0.00 0.00 3.16
3090 4072 7.754069 TTTTCTTGTGCTGTCTTGTTAAATG 57.246 32.000 0.00 0.00 0.00 2.32
3099 4081 6.765989 TGCTGTCTTGTTAAATGTTACTCTGT 59.234 34.615 0.00 0.00 0.00 3.41
3128 4113 0.536006 ACCACACTCTTGCAGCCTTC 60.536 55.000 0.00 0.00 0.00 3.46
3141 4126 6.869913 TCTTGCAGCCTTCTGAAATATTTTTG 59.130 34.615 1.43 0.00 42.95 2.44
3150 4135 9.912634 CCTTCTGAAATATTTTTGTCTGCTTTA 57.087 29.630 1.43 0.00 0.00 1.85
3201 4186 5.682862 CCGTTGTTCTTGATTTCTGTTTCTG 59.317 40.000 0.00 0.00 0.00 3.02
3312 4465 2.503331 TGTGAACAAATCCATGCGAGT 58.497 42.857 0.00 0.00 0.00 4.18
3365 4518 4.761739 TGAACTGCCTTAAACTTCTGATGG 59.238 41.667 0.00 0.00 0.00 3.51
3407 4693 2.703416 TGCCTTAGTGTCAGCATTGAG 58.297 47.619 0.00 0.00 32.98 3.02
3476 4765 2.803155 TTCGGGTGGATCTGTGCTGC 62.803 60.000 0.00 0.00 0.00 5.25
3484 4777 2.302733 TGGATCTGTGCTGCTTGACTTA 59.697 45.455 0.00 0.00 0.00 2.24
3485 4778 2.675348 GGATCTGTGCTGCTTGACTTAC 59.325 50.000 0.00 0.00 0.00 2.34
3486 4779 3.594134 GATCTGTGCTGCTTGACTTACT 58.406 45.455 0.00 0.00 0.00 2.24
3487 4780 3.475566 TCTGTGCTGCTTGACTTACTT 57.524 42.857 0.00 0.00 0.00 2.24
3488 4781 3.393800 TCTGTGCTGCTTGACTTACTTC 58.606 45.455 0.00 0.00 0.00 3.01
3489 4782 2.135139 TGTGCTGCTTGACTTACTTCG 58.865 47.619 0.00 0.00 0.00 3.79
3492 4785 2.028112 TGCTGCTTGACTTACTTCGGAT 60.028 45.455 0.00 0.00 0.00 4.18
3685 5144 8.340443 GGAGTATTATTAACCGCTTTGTTTAGG 58.660 37.037 0.00 0.00 0.00 2.69
3704 5163 0.890683 GCACCATGAGTTTCCCTTGG 59.109 55.000 0.00 0.00 35.62 3.61
3725 5266 7.064253 CCTTGGTATCCGTTAGTTTCTGTTTAG 59.936 40.741 0.00 0.00 0.00 1.85
3728 5269 8.584157 TGGTATCCGTTAGTTTCTGTTTAGTTA 58.416 33.333 0.00 0.00 0.00 2.24
3830 5373 3.245948 ACAGGACTTTGGAGGATCTCTCT 60.246 47.826 10.01 0.00 42.10 3.10
3896 5440 4.851558 GTCGCTCATTAATGTTTCACCAAC 59.148 41.667 14.97 1.78 35.71 3.77
3901 5445 5.457140 TCATTAATGTTTCACCAACTTCGC 58.543 37.500 14.97 0.00 36.21 4.70
4028 5578 9.797642 ATATCTTCATATTACACCAATTGCAGA 57.202 29.630 0.00 0.00 0.00 4.26
4039 5590 7.828508 ACACCAATTGCAGATATGTATTGAT 57.171 32.000 14.76 0.41 0.00 2.57
4041 5592 8.139350 ACACCAATTGCAGATATGTATTGATTG 58.861 33.333 14.76 13.28 0.00 2.67
4115 5671 2.594040 GCGCGTTTGTGTTTCATTGTTG 60.594 45.455 8.43 0.00 0.00 3.33
4125 5681 8.800231 TTGTGTTTCATTGTTGATCACATTAG 57.200 30.769 0.00 0.00 41.79 1.73
4178 5735 7.437862 CCTTATTTGTGCTAAAAAGCTGACAAA 59.562 33.333 14.48 14.48 41.51 2.83
4233 5790 3.368948 GGGAGGAGATATCGGAGCAATTC 60.369 52.174 0.00 0.00 0.00 2.17
4268 5825 5.009631 TGGACCCAATGATGTGAGTTAAAG 58.990 41.667 0.00 0.00 0.00 1.85
4286 5843 6.350361 AGTTAAAGCAAACCTTTTACGTGGTT 60.350 34.615 0.00 0.00 43.96 3.67
4307 5864 6.544197 TGGTTCATTGTTGTAGCTCTTGTTTA 59.456 34.615 0.00 0.00 0.00 2.01
4314 5871 7.038154 TGTTGTAGCTCTTGTTTAAAATGCT 57.962 32.000 0.00 0.00 0.00 3.79
4319 5876 6.884280 AGCTCTTGTTTAAAATGCTACAGT 57.116 33.333 0.00 0.00 0.00 3.55
4549 6115 0.617249 AGAGACTCTCCTTGGCTGGG 60.617 60.000 0.00 0.00 0.00 4.45
4560 6126 2.353573 GGCTGGGCCTCCGTTTTA 59.646 61.111 4.53 0.00 46.69 1.52
4668 6234 1.726853 ATAACTCTGGCTGCGTTGAC 58.273 50.000 9.61 0.00 0.00 3.18
4764 6330 5.012046 AGTTTGAAAAAGAGGCCATTTAGGG 59.988 40.000 5.01 0.00 38.09 3.53
4765 6331 4.396357 TGAAAAAGAGGCCATTTAGGGA 57.604 40.909 5.01 0.00 38.09 4.20
4766 6332 4.946646 TGAAAAAGAGGCCATTTAGGGAT 58.053 39.130 5.01 0.00 38.09 3.85
4805 6371 3.351740 TCCAGTGTTCAGTGAAAGCAAA 58.648 40.909 7.25 0.00 0.00 3.68
4854 6426 5.018539 TCATACTCCTACAATGGAAACGG 57.981 43.478 0.00 0.00 35.43 4.44
4890 6471 6.137415 ACAAACGTGAATTAACACAATACCG 58.863 36.000 0.00 0.00 40.34 4.02
4897 6478 7.302524 GTGAATTAACACAATACCGTGAATGT 58.697 34.615 0.00 0.00 39.34 2.71
4900 6481 4.398549 AACACAATACCGTGAATGTTCG 57.601 40.909 0.00 0.00 39.34 3.95
4931 6513 7.778470 TTGTTAATTTTTACTTGCAACTGGG 57.222 32.000 0.00 0.00 0.00 4.45
4935 6517 9.315525 GTTAATTTTTACTTGCAACTGGGTTTA 57.684 29.630 0.00 0.00 0.00 2.01
4966 6548 3.733883 TCTTCTTCTCCGGTCCTTCTA 57.266 47.619 0.00 0.00 0.00 2.10
4967 6549 4.252570 TCTTCTTCTCCGGTCCTTCTAT 57.747 45.455 0.00 0.00 0.00 1.98
4968 6550 3.954904 TCTTCTTCTCCGGTCCTTCTATG 59.045 47.826 0.00 0.00 0.00 2.23
4969 6551 2.032620 TCTTCTCCGGTCCTTCTATGC 58.967 52.381 0.00 0.00 0.00 3.14
4970 6552 2.035632 CTTCTCCGGTCCTTCTATGCT 58.964 52.381 0.00 0.00 0.00 3.79
4971 6553 2.160721 TCTCCGGTCCTTCTATGCTT 57.839 50.000 0.00 0.00 0.00 3.91
4972 6554 3.308035 TCTCCGGTCCTTCTATGCTTA 57.692 47.619 0.00 0.00 0.00 3.09
4973 6555 3.845860 TCTCCGGTCCTTCTATGCTTAT 58.154 45.455 0.00 0.00 0.00 1.73
4974 6556 4.223953 TCTCCGGTCCTTCTATGCTTATT 58.776 43.478 0.00 0.00 0.00 1.40
4975 6557 5.391256 TCTCCGGTCCTTCTATGCTTATTA 58.609 41.667 0.00 0.00 0.00 0.98
4976 6558 5.836898 TCTCCGGTCCTTCTATGCTTATTAA 59.163 40.000 0.00 0.00 0.00 1.40
4977 6559 6.497259 TCTCCGGTCCTTCTATGCTTATTAAT 59.503 38.462 0.00 0.00 0.00 1.40
4978 6560 6.464222 TCCGGTCCTTCTATGCTTATTAATG 58.536 40.000 0.00 0.00 0.00 1.90
4979 6561 6.042781 TCCGGTCCTTCTATGCTTATTAATGT 59.957 38.462 0.00 0.00 0.00 2.71
4980 6562 6.710744 CCGGTCCTTCTATGCTTATTAATGTT 59.289 38.462 0.00 0.00 0.00 2.71
4981 6563 7.307989 CCGGTCCTTCTATGCTTATTAATGTTG 60.308 40.741 0.00 0.00 0.00 3.33
4982 6564 7.226720 CGGTCCTTCTATGCTTATTAATGTTGT 59.773 37.037 0.00 0.00 0.00 3.32
4983 6565 8.903820 GGTCCTTCTATGCTTATTAATGTTGTT 58.096 33.333 0.00 0.00 0.00 2.83
5006 6588 8.984764 TGTTTTATGAGTAATATGTACCATCGC 58.015 33.333 0.00 0.00 0.00 4.58
5007 6589 8.984764 GTTTTATGAGTAATATGTACCATCGCA 58.015 33.333 0.00 0.00 0.00 5.10
5008 6590 8.757164 TTTATGAGTAATATGTACCATCGCAG 57.243 34.615 0.00 0.00 0.00 5.18
5009 6591 5.784578 TGAGTAATATGTACCATCGCAGT 57.215 39.130 0.00 0.00 0.00 4.40
5010 6592 5.769367 TGAGTAATATGTACCATCGCAGTC 58.231 41.667 0.00 0.00 0.00 3.51
5011 6593 5.535030 TGAGTAATATGTACCATCGCAGTCT 59.465 40.000 0.00 0.00 0.00 3.24
5012 6594 6.713450 TGAGTAATATGTACCATCGCAGTCTA 59.287 38.462 0.00 0.00 0.00 2.59
5013 6595 7.393515 TGAGTAATATGTACCATCGCAGTCTAT 59.606 37.037 0.00 0.00 0.00 1.98
5014 6596 7.763356 AGTAATATGTACCATCGCAGTCTATC 58.237 38.462 0.00 0.00 0.00 2.08
5015 6597 6.842437 AATATGTACCATCGCAGTCTATCT 57.158 37.500 0.00 0.00 0.00 1.98
5016 6598 3.990318 TGTACCATCGCAGTCTATCTG 57.010 47.619 0.00 0.00 46.12 2.90
5017 6599 3.288092 TGTACCATCGCAGTCTATCTGT 58.712 45.455 0.00 0.00 45.23 3.41
5018 6600 3.699538 TGTACCATCGCAGTCTATCTGTT 59.300 43.478 0.00 0.00 45.23 3.16
5019 6601 3.170791 ACCATCGCAGTCTATCTGTTG 57.829 47.619 0.00 0.00 45.23 3.33
5020 6602 2.497675 ACCATCGCAGTCTATCTGTTGT 59.502 45.455 0.00 0.00 45.23 3.32
5021 6603 3.055819 ACCATCGCAGTCTATCTGTTGTT 60.056 43.478 0.00 0.00 45.23 2.83
5022 6604 4.159693 ACCATCGCAGTCTATCTGTTGTTA 59.840 41.667 0.00 0.00 45.23 2.41
5023 6605 5.163405 ACCATCGCAGTCTATCTGTTGTTAT 60.163 40.000 0.00 0.00 45.23 1.89
5024 6606 5.176406 CCATCGCAGTCTATCTGTTGTTATG 59.824 44.000 0.00 0.00 45.23 1.90
5025 6607 4.112634 TCGCAGTCTATCTGTTGTTATGC 58.887 43.478 0.00 0.00 45.23 3.14
5026 6608 3.246226 CGCAGTCTATCTGTTGTTATGCC 59.754 47.826 0.00 0.00 45.23 4.40
5027 6609 3.561725 GCAGTCTATCTGTTGTTATGCCC 59.438 47.826 0.00 0.00 45.23 5.36
5028 6610 4.684485 GCAGTCTATCTGTTGTTATGCCCT 60.684 45.833 0.00 0.00 45.23 5.19
5029 6611 5.431765 CAGTCTATCTGTTGTTATGCCCTT 58.568 41.667 0.00 0.00 39.17 3.95
5030 6612 5.295292 CAGTCTATCTGTTGTTATGCCCTTG 59.705 44.000 0.00 0.00 39.17 3.61
5031 6613 4.035675 GTCTATCTGTTGTTATGCCCTTGC 59.964 45.833 0.00 0.00 38.26 4.01
5032 6614 1.544724 TCTGTTGTTATGCCCTTGCC 58.455 50.000 0.00 0.00 36.33 4.52
5033 6615 1.075374 TCTGTTGTTATGCCCTTGCCT 59.925 47.619 0.00 0.00 36.33 4.75
5034 6616 1.203052 CTGTTGTTATGCCCTTGCCTG 59.797 52.381 0.00 0.00 36.33 4.85
5035 6617 0.532115 GTTGTTATGCCCTTGCCTGG 59.468 55.000 0.00 0.00 36.33 4.45
5052 6634 7.896383 TTGCCTGGCAAATTTATATAACTCT 57.104 32.000 30.60 0.00 45.96 3.24
5053 6635 7.896383 TGCCTGGCAAATTTATATAACTCTT 57.104 32.000 21.08 0.00 34.76 2.85
5054 6636 7.715657 TGCCTGGCAAATTTATATAACTCTTG 58.284 34.615 21.08 1.15 34.76 3.02
5055 6637 7.559533 TGCCTGGCAAATTTATATAACTCTTGA 59.440 33.333 21.08 0.00 34.76 3.02
5056 6638 7.862873 GCCTGGCAAATTTATATAACTCTTGAC 59.137 37.037 15.17 10.10 0.00 3.18
5057 6639 9.125026 CCTGGCAAATTTATATAACTCTTGACT 57.875 33.333 13.49 0.00 0.00 3.41
5058 6640 9.941664 CTGGCAAATTTATATAACTCTTGACTG 57.058 33.333 13.49 10.66 0.00 3.51
5059 6641 8.405531 TGGCAAATTTATATAACTCTTGACTGC 58.594 33.333 13.49 7.45 0.00 4.40
5060 6642 7.587757 GGCAAATTTATATAACTCTTGACTGCG 59.412 37.037 11.76 0.00 0.00 5.18
5061 6643 8.122952 GCAAATTTATATAACTCTTGACTGCGT 58.877 33.333 11.76 0.00 0.00 5.24
5062 6644 9.988350 CAAATTTATATAACTCTTGACTGCGTT 57.012 29.630 0.00 0.00 0.00 4.84
5063 6645 9.988350 AAATTTATATAACTCTTGACTGCGTTG 57.012 29.630 0.00 0.00 0.00 4.10
5064 6646 8.942338 ATTTATATAACTCTTGACTGCGTTGA 57.058 30.769 0.00 0.00 0.00 3.18
5065 6647 8.942338 TTTATATAACTCTTGACTGCGTTGAT 57.058 30.769 0.00 0.00 0.00 2.57
5068 6650 4.992381 AACTCTTGACTGCGTTGATAAC 57.008 40.909 0.00 0.00 0.00 1.89
5069 6651 3.326747 ACTCTTGACTGCGTTGATAACC 58.673 45.455 0.00 0.00 0.00 2.85
5070 6652 3.006967 ACTCTTGACTGCGTTGATAACCT 59.993 43.478 0.00 0.00 0.00 3.50
5071 6653 3.325870 TCTTGACTGCGTTGATAACCTG 58.674 45.455 0.00 0.00 0.00 4.00
5072 6654 2.093306 TGACTGCGTTGATAACCTGG 57.907 50.000 0.00 0.00 0.00 4.45
5073 6655 1.621317 TGACTGCGTTGATAACCTGGA 59.379 47.619 0.00 0.00 0.00 3.86
5074 6656 2.037902 TGACTGCGTTGATAACCTGGAA 59.962 45.455 0.00 0.00 0.00 3.53
5075 6657 3.071479 GACTGCGTTGATAACCTGGAAA 58.929 45.455 0.00 0.00 0.00 3.13
5076 6658 3.074412 ACTGCGTTGATAACCTGGAAAG 58.926 45.455 0.00 0.00 0.00 2.62
5077 6659 3.244422 ACTGCGTTGATAACCTGGAAAGA 60.244 43.478 0.00 0.00 0.00 2.52
5078 6660 3.941483 CTGCGTTGATAACCTGGAAAGAT 59.059 43.478 0.00 0.00 0.00 2.40
5079 6661 3.689161 TGCGTTGATAACCTGGAAAGATG 59.311 43.478 0.00 0.00 0.00 2.90
5080 6662 3.689649 GCGTTGATAACCTGGAAAGATGT 59.310 43.478 0.00 0.00 0.00 3.06
5081 6663 4.156008 GCGTTGATAACCTGGAAAGATGTT 59.844 41.667 0.00 0.00 0.00 2.71
5082 6664 5.631026 CGTTGATAACCTGGAAAGATGTTG 58.369 41.667 0.00 0.00 0.00 3.33
5083 6665 5.411361 CGTTGATAACCTGGAAAGATGTTGA 59.589 40.000 0.00 0.00 0.00 3.18
5084 6666 6.612306 GTTGATAACCTGGAAAGATGTTGAC 58.388 40.000 0.00 0.00 0.00 3.18
5085 6667 4.935205 TGATAACCTGGAAAGATGTTGACG 59.065 41.667 0.00 0.00 0.00 4.35
5086 6668 1.523758 ACCTGGAAAGATGTTGACGC 58.476 50.000 0.00 0.00 0.00 5.19
5087 6669 1.072331 ACCTGGAAAGATGTTGACGCT 59.928 47.619 0.00 0.00 0.00 5.07
5088 6670 1.734465 CCTGGAAAGATGTTGACGCTC 59.266 52.381 0.00 0.00 0.00 5.03
5089 6671 2.416747 CTGGAAAGATGTTGACGCTCA 58.583 47.619 0.00 0.00 0.00 4.26
5090 6672 2.807967 CTGGAAAGATGTTGACGCTCAA 59.192 45.455 0.00 0.00 33.32 3.02
5091 6673 3.411446 TGGAAAGATGTTGACGCTCAAT 58.589 40.909 4.21 0.00 38.79 2.57
5092 6674 3.820467 TGGAAAGATGTTGACGCTCAATT 59.180 39.130 4.21 0.00 38.79 2.32
5093 6675 4.278170 TGGAAAGATGTTGACGCTCAATTT 59.722 37.500 4.21 1.90 38.79 1.82
5094 6676 4.618489 GGAAAGATGTTGACGCTCAATTTG 59.382 41.667 4.21 0.00 38.79 2.32
5095 6677 4.836125 AAGATGTTGACGCTCAATTTGT 57.164 36.364 4.21 0.00 38.79 2.83
5096 6678 4.410492 AGATGTTGACGCTCAATTTGTC 57.590 40.909 4.21 0.00 38.79 3.18
5097 6679 2.661504 TGTTGACGCTCAATTTGTCG 57.338 45.000 10.54 10.54 38.79 4.35
5098 6680 1.937223 TGTTGACGCTCAATTTGTCGT 59.063 42.857 15.30 15.30 38.79 4.34
5099 6681 2.353269 TGTTGACGCTCAATTTGTCGTT 59.647 40.909 16.05 5.40 38.79 3.85
5100 6682 2.941891 TGACGCTCAATTTGTCGTTC 57.058 45.000 16.05 11.61 35.12 3.95
5101 6683 1.191425 TGACGCTCAATTTGTCGTTCG 59.809 47.619 16.05 8.16 35.12 3.95
5102 6684 1.454276 GACGCTCAATTTGTCGTTCGA 59.546 47.619 16.05 0.00 35.12 3.71
5103 6685 1.191647 ACGCTCAATTTGTCGTTCGAC 59.808 47.619 16.85 16.85 35.84 4.20
5104 6686 1.455786 CGCTCAATTTGTCGTTCGACT 59.544 47.619 22.49 3.74 36.23 4.18
5105 6687 2.718789 CGCTCAATTTGTCGTTCGACTG 60.719 50.000 22.49 14.07 36.23 3.51
5106 6688 2.475111 GCTCAATTTGTCGTTCGACTGA 59.525 45.455 22.49 16.83 36.23 3.41
5107 6689 3.422343 GCTCAATTTGTCGTTCGACTGAG 60.422 47.826 24.40 24.40 37.07 3.35
5108 6690 3.972403 TCAATTTGTCGTTCGACTGAGA 58.028 40.909 22.49 12.30 36.23 3.27
5109 6691 3.734231 TCAATTTGTCGTTCGACTGAGAC 59.266 43.478 22.49 0.00 36.23 3.36
5110 6692 3.644884 ATTTGTCGTTCGACTGAGACT 57.355 42.857 22.49 3.28 36.23 3.24
5111 6693 3.431922 TTTGTCGTTCGACTGAGACTT 57.568 42.857 22.49 0.00 36.23 3.01
5112 6694 3.431922 TTGTCGTTCGACTGAGACTTT 57.568 42.857 22.49 0.00 36.23 2.66
5113 6695 2.727777 TGTCGTTCGACTGAGACTTTG 58.272 47.619 22.49 0.00 36.23 2.77
5114 6696 2.098607 TGTCGTTCGACTGAGACTTTGT 59.901 45.455 22.49 0.00 36.23 2.83
5115 6697 3.114065 GTCGTTCGACTGAGACTTTGTT 58.886 45.455 16.50 0.00 32.82 2.83
5116 6698 4.201940 TGTCGTTCGACTGAGACTTTGTTA 60.202 41.667 22.49 0.00 36.23 2.41
5117 6699 4.916249 GTCGTTCGACTGAGACTTTGTTAT 59.084 41.667 16.50 0.00 32.82 1.89
5118 6700 4.915667 TCGTTCGACTGAGACTTTGTTATG 59.084 41.667 0.00 0.00 0.00 1.90
5119 6701 4.680110 CGTTCGACTGAGACTTTGTTATGT 59.320 41.667 0.00 0.00 0.00 2.29
5120 6702 5.164177 CGTTCGACTGAGACTTTGTTATGTC 60.164 44.000 0.00 0.00 0.00 3.06
5121 6703 4.806330 TCGACTGAGACTTTGTTATGTCC 58.194 43.478 0.00 0.00 34.02 4.02
5122 6704 3.927142 CGACTGAGACTTTGTTATGTCCC 59.073 47.826 0.00 0.00 34.02 4.46
5123 6705 4.560716 CGACTGAGACTTTGTTATGTCCCA 60.561 45.833 0.00 0.00 34.02 4.37
5124 6706 4.899502 ACTGAGACTTTGTTATGTCCCAG 58.100 43.478 0.00 0.00 42.29 4.45
5125 6707 4.348168 ACTGAGACTTTGTTATGTCCCAGT 59.652 41.667 4.82 4.82 43.85 4.00
5126 6708 5.163195 ACTGAGACTTTGTTATGTCCCAGTT 60.163 40.000 4.82 0.00 45.48 3.16
5127 6709 5.063204 TGAGACTTTGTTATGTCCCAGTTG 58.937 41.667 0.00 0.00 34.02 3.16
5128 6710 5.163248 TGAGACTTTGTTATGTCCCAGTTGA 60.163 40.000 0.00 0.00 34.02 3.18
5129 6711 5.880901 AGACTTTGTTATGTCCCAGTTGAT 58.119 37.500 0.00 0.00 34.02 2.57
5130 6712 7.016153 AGACTTTGTTATGTCCCAGTTGATA 57.984 36.000 0.00 0.00 34.02 2.15
5131 6713 7.633789 AGACTTTGTTATGTCCCAGTTGATAT 58.366 34.615 0.00 0.00 34.02 1.63
5132 6714 8.768397 AGACTTTGTTATGTCCCAGTTGATATA 58.232 33.333 0.00 0.00 34.02 0.86
5133 6715 9.561069 GACTTTGTTATGTCCCAGTTGATATAT 57.439 33.333 0.00 0.00 0.00 0.86
5134 6716 9.920946 ACTTTGTTATGTCCCAGTTGATATATT 57.079 29.630 0.00 0.00 0.00 1.28
5136 6718 9.913310 TTTGTTATGTCCCAGTTGATATATTCA 57.087 29.630 0.00 0.00 0.00 2.57
5137 6719 8.902540 TGTTATGTCCCAGTTGATATATTCAC 57.097 34.615 0.00 0.00 32.84 3.18
5138 6720 8.490311 TGTTATGTCCCAGTTGATATATTCACA 58.510 33.333 0.00 0.00 32.84 3.58
5139 6721 9.337396 GTTATGTCCCAGTTGATATATTCACAA 57.663 33.333 0.00 0.00 32.84 3.33
5143 6725 9.725019 TGTCCCAGTTGATATATTCACAATATC 57.275 33.333 0.00 0.00 37.01 1.63
5144 6726 9.950496 GTCCCAGTTGATATATTCACAATATCT 57.050 33.333 5.08 0.00 37.27 1.98
5162 6744 9.783081 ACAATATCTTACATTGAGATGTATGCA 57.217 29.630 0.00 0.00 45.53 3.96
5170 6752 9.585099 TTACATTGAGATGTATGCAAAATTTCC 57.415 29.630 0.00 0.00 45.53 3.13
5171 6753 7.844009 ACATTGAGATGTATGCAAAATTTCCT 58.156 30.769 0.00 0.00 44.51 3.36
5172 6754 8.316214 ACATTGAGATGTATGCAAAATTTCCTT 58.684 29.630 0.00 0.00 44.51 3.36
5173 6755 8.814235 CATTGAGATGTATGCAAAATTTCCTTC 58.186 33.333 0.00 0.00 0.00 3.46
5174 6756 7.707624 TGAGATGTATGCAAAATTTCCTTCT 57.292 32.000 0.00 0.00 0.00 2.85
5175 6757 8.125978 TGAGATGTATGCAAAATTTCCTTCTT 57.874 30.769 0.00 0.00 0.00 2.52
5176 6758 8.246180 TGAGATGTATGCAAAATTTCCTTCTTC 58.754 33.333 0.00 0.00 0.00 2.87
5177 6759 8.358582 AGATGTATGCAAAATTTCCTTCTTCT 57.641 30.769 0.00 0.00 0.00 2.85
5178 6760 8.810041 AGATGTATGCAAAATTTCCTTCTTCTT 58.190 29.630 0.00 0.00 0.00 2.52
5179 6761 9.428097 GATGTATGCAAAATTTCCTTCTTCTTT 57.572 29.630 0.00 0.00 0.00 2.52
5180 6762 8.816640 TGTATGCAAAATTTCCTTCTTCTTTC 57.183 30.769 0.00 0.00 0.00 2.62
5181 6763 8.641541 TGTATGCAAAATTTCCTTCTTCTTTCT 58.358 29.630 0.00 0.00 0.00 2.52
5182 6764 9.481340 GTATGCAAAATTTCCTTCTTCTTTCTT 57.519 29.630 0.00 0.00 0.00 2.52
5183 6765 8.599055 ATGCAAAATTTCCTTCTTCTTTCTTC 57.401 30.769 0.00 0.00 0.00 2.87
5184 6766 7.785033 TGCAAAATTTCCTTCTTCTTTCTTCT 58.215 30.769 0.00 0.00 0.00 2.85
5185 6767 8.260114 TGCAAAATTTCCTTCTTCTTTCTTCTT 58.740 29.630 0.00 0.00 0.00 2.52
5186 6768 9.102757 GCAAAATTTCCTTCTTCTTTCTTCTTT 57.897 29.630 0.00 0.00 0.00 2.52
5216 6798 9.453572 ACATGTTATGTCATTTTACTGTGATCT 57.546 29.630 0.00 0.00 39.92 2.75
5219 6801 9.098355 TGTTATGTCATTTTACTGTGATCTAGC 57.902 33.333 0.00 0.00 0.00 3.42
5220 6802 8.552034 GTTATGTCATTTTACTGTGATCTAGCC 58.448 37.037 0.00 0.00 0.00 3.93
5221 6803 6.048732 TGTCATTTTACTGTGATCTAGCCA 57.951 37.500 0.00 0.00 0.00 4.75
5222 6804 5.874810 TGTCATTTTACTGTGATCTAGCCAC 59.125 40.000 7.80 7.80 35.23 5.01
5223 6805 5.874810 GTCATTTTACTGTGATCTAGCCACA 59.125 40.000 14.31 14.31 41.68 4.17
5224 6806 5.874810 TCATTTTACTGTGATCTAGCCACAC 59.125 40.000 11.98 9.30 39.36 3.82
5225 6807 3.887621 TTACTGTGATCTAGCCACACC 57.112 47.619 11.98 0.00 39.36 4.16
5226 6808 0.905357 ACTGTGATCTAGCCACACCC 59.095 55.000 11.98 0.00 39.36 4.61
5227 6809 1.198713 CTGTGATCTAGCCACACCCT 58.801 55.000 11.98 0.00 39.36 4.34
5228 6810 1.556911 CTGTGATCTAGCCACACCCTT 59.443 52.381 11.98 0.00 39.36 3.95
5229 6811 1.278985 TGTGATCTAGCCACACCCTTG 59.721 52.381 11.98 0.00 39.36 3.61
5230 6812 0.911769 TGATCTAGCCACACCCTTGG 59.088 55.000 0.00 0.00 39.98 3.61
5231 6813 0.912486 GATCTAGCCACACCCTTGGT 59.088 55.000 0.00 0.00 39.09 3.67
5232 6814 0.912486 ATCTAGCCACACCCTTGGTC 59.088 55.000 0.00 0.00 39.09 4.02
5233 6815 1.079127 CTAGCCACACCCTTGGTCG 60.079 63.158 0.00 0.00 39.09 4.79
5234 6816 1.827399 CTAGCCACACCCTTGGTCGT 61.827 60.000 0.00 0.00 39.09 4.34
5235 6817 1.412453 TAGCCACACCCTTGGTCGTT 61.412 55.000 0.00 0.00 39.09 3.85
5236 6818 2.258726 GCCACACCCTTGGTCGTTC 61.259 63.158 0.00 0.00 39.09 3.95
5237 6819 1.959226 CCACACCCTTGGTCGTTCG 60.959 63.158 0.00 0.00 31.02 3.95
5238 6820 1.227438 CACACCCTTGGTCGTTCGT 60.227 57.895 0.00 0.00 31.02 3.85
5239 6821 0.812412 CACACCCTTGGTCGTTCGTT 60.812 55.000 0.00 0.00 31.02 3.85
5240 6822 0.531311 ACACCCTTGGTCGTTCGTTC 60.531 55.000 0.00 0.00 31.02 3.95
5241 6823 0.249741 CACCCTTGGTCGTTCGTTCT 60.250 55.000 0.00 0.00 31.02 3.01
5242 6824 0.466963 ACCCTTGGTCGTTCGTTCTT 59.533 50.000 0.00 0.00 0.00 2.52
5243 6825 1.145803 CCCTTGGTCGTTCGTTCTTC 58.854 55.000 0.00 0.00 0.00 2.87
5244 6826 1.270147 CCCTTGGTCGTTCGTTCTTCT 60.270 52.381 0.00 0.00 0.00 2.85
5245 6827 2.480845 CCTTGGTCGTTCGTTCTTCTT 58.519 47.619 0.00 0.00 0.00 2.52
5246 6828 2.475487 CCTTGGTCGTTCGTTCTTCTTC 59.525 50.000 0.00 0.00 0.00 2.87
5247 6829 1.762419 TGGTCGTTCGTTCTTCTTCG 58.238 50.000 0.00 0.00 0.00 3.79
5248 6830 1.066002 TGGTCGTTCGTTCTTCTTCGT 59.934 47.619 0.00 0.00 0.00 3.85
5249 6831 2.122564 GGTCGTTCGTTCTTCTTCGTT 58.877 47.619 0.00 0.00 0.00 3.85
5250 6832 2.537214 GGTCGTTCGTTCTTCTTCGTTT 59.463 45.455 0.00 0.00 0.00 3.60
5251 6833 3.519497 GTCGTTCGTTCTTCTTCGTTTG 58.481 45.455 0.00 0.00 0.00 2.93
5252 6834 3.000376 GTCGTTCGTTCTTCTTCGTTTGT 60.000 43.478 0.00 0.00 0.00 2.83
5253 6835 3.613737 TCGTTCGTTCTTCTTCGTTTGTT 59.386 39.130 0.00 0.00 0.00 2.83
5254 6836 3.952021 CGTTCGTTCTTCTTCGTTTGTTC 59.048 43.478 0.00 0.00 0.00 3.18
5255 6837 4.259690 CGTTCGTTCTTCTTCGTTTGTTCT 60.260 41.667 0.00 0.00 0.00 3.01
5256 6838 5.557388 GTTCGTTCTTCTTCGTTTGTTCTT 58.443 37.500 0.00 0.00 0.00 2.52
5257 6839 5.385396 TCGTTCTTCTTCGTTTGTTCTTC 57.615 39.130 0.00 0.00 0.00 2.87
5258 6840 4.865925 TCGTTCTTCTTCGTTTGTTCTTCA 59.134 37.500 0.00 0.00 0.00 3.02
5259 6841 5.522460 TCGTTCTTCTTCGTTTGTTCTTCAT 59.478 36.000 0.00 0.00 0.00 2.57
5260 6842 5.617187 CGTTCTTCTTCGTTTGTTCTTCATG 59.383 40.000 0.00 0.00 0.00 3.07
5261 6843 5.095691 TCTTCTTCGTTTGTTCTTCATGC 57.904 39.130 0.00 0.00 0.00 4.06
5262 6844 3.519908 TCTTCGTTTGTTCTTCATGCG 57.480 42.857 0.00 0.00 0.00 4.73
5263 6845 3.127589 TCTTCGTTTGTTCTTCATGCGA 58.872 40.909 0.00 0.00 33.42 5.10
5264 6846 2.941891 TCGTTTGTTCTTCATGCGAC 57.058 45.000 0.00 0.00 31.55 5.19
5265 6847 1.529438 TCGTTTGTTCTTCATGCGACC 59.471 47.619 0.00 0.00 31.55 4.79
5266 6848 1.262950 CGTTTGTTCTTCATGCGACCA 59.737 47.619 0.00 0.00 0.00 4.02
5267 6849 2.286713 CGTTTGTTCTTCATGCGACCAA 60.287 45.455 0.00 0.00 0.00 3.67
5268 6850 3.300009 GTTTGTTCTTCATGCGACCAAG 58.700 45.455 0.00 0.00 0.00 3.61
5269 6851 1.522668 TGTTCTTCATGCGACCAAGG 58.477 50.000 0.00 0.00 0.00 3.61
5270 6852 1.071542 TGTTCTTCATGCGACCAAGGA 59.928 47.619 0.00 0.00 0.00 3.36
5271 6853 2.151202 GTTCTTCATGCGACCAAGGAA 58.849 47.619 0.00 0.00 0.00 3.36
5272 6854 1.808411 TCTTCATGCGACCAAGGAAC 58.192 50.000 0.00 0.00 0.00 3.62
5273 6855 0.804989 CTTCATGCGACCAAGGAACC 59.195 55.000 0.00 0.00 0.00 3.62
5274 6856 0.109532 TTCATGCGACCAAGGAACCA 59.890 50.000 0.00 0.00 0.00 3.67
5275 6857 0.605319 TCATGCGACCAAGGAACCAC 60.605 55.000 0.00 0.00 0.00 4.16
5276 6858 0.606401 CATGCGACCAAGGAACCACT 60.606 55.000 0.00 0.00 0.00 4.00
5277 6859 0.110486 ATGCGACCAAGGAACCACTT 59.890 50.000 0.00 0.00 0.00 3.16
5278 6860 0.759959 TGCGACCAAGGAACCACTTA 59.240 50.000 0.00 0.00 0.00 2.24
5279 6861 1.270625 TGCGACCAAGGAACCACTTAG 60.271 52.381 0.00 0.00 0.00 2.18
5280 6862 1.944430 GCGACCAAGGAACCACTTAGG 60.944 57.143 0.00 0.00 45.67 2.69
5281 6863 1.822506 GACCAAGGAACCACTTAGGC 58.177 55.000 0.00 0.00 43.14 3.93
5282 6864 0.404426 ACCAAGGAACCACTTAGGCC 59.596 55.000 0.00 0.00 43.14 5.19
5283 6865 0.676782 CCAAGGAACCACTTAGGCCG 60.677 60.000 0.00 0.00 43.14 6.13
5284 6866 0.036306 CAAGGAACCACTTAGGCCGT 59.964 55.000 0.00 0.00 43.14 5.68
5285 6867 0.036306 AAGGAACCACTTAGGCCGTG 59.964 55.000 0.00 0.00 43.14 4.94
5286 6868 0.834687 AGGAACCACTTAGGCCGTGA 60.835 55.000 10.51 0.00 43.14 4.35
5287 6869 0.252197 GGAACCACTTAGGCCGTGAT 59.748 55.000 10.51 0.00 43.14 3.06
5288 6870 1.339727 GGAACCACTTAGGCCGTGATT 60.340 52.381 10.51 0.00 43.14 2.57
5289 6871 1.737793 GAACCACTTAGGCCGTGATTG 59.262 52.381 10.51 0.00 43.14 2.67
5290 6872 0.981183 ACCACTTAGGCCGTGATTGA 59.019 50.000 10.51 0.00 43.14 2.57
5291 6873 1.349688 ACCACTTAGGCCGTGATTGAA 59.650 47.619 10.51 0.00 43.14 2.69
5292 6874 2.026262 ACCACTTAGGCCGTGATTGAAT 60.026 45.455 10.51 0.00 43.14 2.57
5293 6875 3.016736 CCACTTAGGCCGTGATTGAATT 58.983 45.455 10.51 0.00 34.35 2.17
5294 6876 3.181497 CCACTTAGGCCGTGATTGAATTG 60.181 47.826 10.51 0.00 34.35 2.32
5295 6877 3.440173 CACTTAGGCCGTGATTGAATTGT 59.560 43.478 3.33 0.00 34.35 2.71
5296 6878 3.689649 ACTTAGGCCGTGATTGAATTGTC 59.310 43.478 0.00 0.00 0.00 3.18
5297 6879 1.086696 AGGCCGTGATTGAATTGTCG 58.913 50.000 0.00 0.00 0.00 4.35
5298 6880 0.802494 GGCCGTGATTGAATTGTCGT 59.198 50.000 0.00 0.00 0.00 4.34
5299 6881 1.465689 GGCCGTGATTGAATTGTCGTG 60.466 52.381 0.00 0.00 0.00 4.35
5300 6882 1.196808 GCCGTGATTGAATTGTCGTGT 59.803 47.619 0.00 0.00 0.00 4.49
5301 6883 2.350388 GCCGTGATTGAATTGTCGTGTT 60.350 45.455 0.00 0.00 0.00 3.32
5302 6884 3.851838 GCCGTGATTGAATTGTCGTGTTT 60.852 43.478 0.00 0.00 0.00 2.83
5303 6885 3.906008 CCGTGATTGAATTGTCGTGTTTC 59.094 43.478 0.00 0.00 0.00 2.78
5304 6886 3.906008 CGTGATTGAATTGTCGTGTTTCC 59.094 43.478 0.00 0.00 0.00 3.13
5305 6887 4.319477 CGTGATTGAATTGTCGTGTTTCCT 60.319 41.667 0.00 0.00 0.00 3.36
5306 6888 5.147162 GTGATTGAATTGTCGTGTTTCCTC 58.853 41.667 0.00 0.00 0.00 3.71
5307 6889 5.049405 GTGATTGAATTGTCGTGTTTCCTCT 60.049 40.000 0.00 0.00 0.00 3.69
5308 6890 6.147164 GTGATTGAATTGTCGTGTTTCCTCTA 59.853 38.462 0.00 0.00 0.00 2.43
5309 6891 6.708502 TGATTGAATTGTCGTGTTTCCTCTAA 59.291 34.615 0.00 0.00 0.00 2.10
5310 6892 7.390440 TGATTGAATTGTCGTGTTTCCTCTAAT 59.610 33.333 0.00 0.00 0.00 1.73
5311 6893 8.786826 ATTGAATTGTCGTGTTTCCTCTAATA 57.213 30.769 0.00 0.00 0.00 0.98
5312 6894 7.591006 TGAATTGTCGTGTTTCCTCTAATAC 57.409 36.000 0.00 0.00 0.00 1.89
5313 6895 7.156000 TGAATTGTCGTGTTTCCTCTAATACA 58.844 34.615 0.00 0.00 0.00 2.29
5314 6896 6.963049 ATTGTCGTGTTTCCTCTAATACAC 57.037 37.500 0.00 0.00 37.97 2.90
5315 6897 4.813027 TGTCGTGTTTCCTCTAATACACC 58.187 43.478 0.00 0.00 38.06 4.16
5316 6898 4.525487 TGTCGTGTTTCCTCTAATACACCT 59.475 41.667 0.00 0.00 38.06 4.00
5317 6899 4.863131 GTCGTGTTTCCTCTAATACACCTG 59.137 45.833 0.00 0.00 38.06 4.00
5318 6900 4.525487 TCGTGTTTCCTCTAATACACCTGT 59.475 41.667 0.00 0.00 38.06 4.00
5319 6901 5.711506 TCGTGTTTCCTCTAATACACCTGTA 59.288 40.000 0.00 0.00 38.06 2.74
5320 6902 6.209192 TCGTGTTTCCTCTAATACACCTGTAA 59.791 38.462 0.00 0.00 38.06 2.41
5321 6903 6.869913 CGTGTTTCCTCTAATACACCTGTAAA 59.130 38.462 0.00 0.00 38.06 2.01
5322 6904 7.385752 CGTGTTTCCTCTAATACACCTGTAAAA 59.614 37.037 0.00 0.00 38.06 1.52
5323 6905 9.227777 GTGTTTCCTCTAATACACCTGTAAAAT 57.772 33.333 0.00 0.00 35.91 1.82
5338 6920 6.300354 CTGTAAAATAAATACAGGCCTCGG 57.700 41.667 0.00 0.00 44.14 4.63
5339 6921 4.577283 TGTAAAATAAATACAGGCCTCGGC 59.423 41.667 0.00 0.00 41.06 5.54
5340 6922 3.577805 AAATAAATACAGGCCTCGGCT 57.422 42.857 0.00 0.00 41.60 5.52
5341 6923 2.841442 ATAAATACAGGCCTCGGCTC 57.159 50.000 0.00 0.00 41.60 4.70
5342 6924 0.387929 TAAATACAGGCCTCGGCTCG 59.612 55.000 0.00 0.00 41.60 5.03
5343 6925 1.614241 AAATACAGGCCTCGGCTCGT 61.614 55.000 0.00 0.00 41.60 4.18
5344 6926 2.017559 AATACAGGCCTCGGCTCGTC 62.018 60.000 0.00 0.00 41.60 4.20
5348 6930 4.736896 GGCCTCGGCTCGTCGTTT 62.737 66.667 8.00 0.00 41.60 3.60
5349 6931 3.179939 GCCTCGGCTCGTCGTTTC 61.180 66.667 0.00 0.00 38.26 2.78
5350 6932 2.874780 CCTCGGCTCGTCGTTTCG 60.875 66.667 0.00 0.00 0.00 3.46
5351 6933 2.126965 CTCGGCTCGTCGTTTCGT 60.127 61.111 0.00 0.00 0.00 3.85
5352 6934 1.728426 CTCGGCTCGTCGTTTCGTT 60.728 57.895 0.00 0.00 0.00 3.85
5353 6935 1.273455 CTCGGCTCGTCGTTTCGTTT 61.273 55.000 0.00 0.00 0.00 3.60
5354 6936 1.127225 CGGCTCGTCGTTTCGTTTC 59.873 57.895 0.00 0.00 0.00 2.78
5355 6937 1.490258 GGCTCGTCGTTTCGTTTCC 59.510 57.895 0.00 0.00 0.00 3.13
5356 6938 1.216941 GGCTCGTCGTTTCGTTTCCA 61.217 55.000 0.00 0.00 0.00 3.53
5357 6939 0.161024 GCTCGTCGTTTCGTTTCCAG 59.839 55.000 0.00 0.00 0.00 3.86
5358 6940 0.161024 CTCGTCGTTTCGTTTCCAGC 59.839 55.000 0.00 0.00 0.00 4.85
5359 6941 1.203313 CGTCGTTTCGTTTCCAGCC 59.797 57.895 0.00 0.00 0.00 4.85
5360 6942 1.203313 GTCGTTTCGTTTCCAGCCG 59.797 57.895 0.00 0.00 0.00 5.52
5361 6943 1.067749 TCGTTTCGTTTCCAGCCGA 59.932 52.632 0.00 0.00 0.00 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
76 117 7.285783 TCGAATATGAAAGAAAAATCGTCGT 57.714 32.000 0.00 0.00 0.00 4.34
257 579 9.906111 GTTCATCAATTTTGAGAAAAAGTTCAC 57.094 29.630 0.00 0.00 41.08 3.18
324 647 8.454570 AGCAAAATCACAAATTTGGAAAAGAT 57.545 26.923 21.74 12.92 37.09 2.40
439 767 6.094881 AGTTCGTGGAAATGAAAAGAGTTCAA 59.905 34.615 0.00 0.00 31.55 2.69
622 1083 1.197721 GCTCATTCCGTTGACCACAAG 59.802 52.381 0.00 0.00 36.64 3.16
868 1341 0.405973 GACCTGGGGAGCTCCTTTTT 59.594 55.000 31.36 12.91 35.95 1.94
869 1342 0.476611 AGACCTGGGGAGCTCCTTTT 60.477 55.000 31.36 12.18 35.95 2.27
870 1343 0.417841 TAGACCTGGGGAGCTCCTTT 59.582 55.000 31.36 11.82 35.95 3.11
871 1344 0.031616 CTAGACCTGGGGAGCTCCTT 60.032 60.000 31.36 11.47 35.95 3.36
872 1345 1.225403 ACTAGACCTGGGGAGCTCCT 61.225 60.000 31.36 12.27 35.95 3.69
873 1346 0.325765 AACTAGACCTGGGGAGCTCC 60.326 60.000 25.59 25.59 0.00 4.70
874 1347 1.116308 GAACTAGACCTGGGGAGCTC 58.884 60.000 4.71 4.71 0.00 4.09
875 1348 0.413832 TGAACTAGACCTGGGGAGCT 59.586 55.000 0.00 0.00 0.00 4.09
876 1349 1.066071 GTTGAACTAGACCTGGGGAGC 60.066 57.143 0.00 0.00 0.00 4.70
877 1350 1.555533 GGTTGAACTAGACCTGGGGAG 59.444 57.143 0.00 0.00 33.08 4.30
878 1351 1.132657 TGGTTGAACTAGACCTGGGGA 60.133 52.381 0.00 0.00 36.86 4.81
879 1352 1.358152 TGGTTGAACTAGACCTGGGG 58.642 55.000 0.00 0.00 36.86 4.96
880 1353 2.372172 AGTTGGTTGAACTAGACCTGGG 59.628 50.000 0.00 0.00 43.54 4.45
881 1354 3.403038 CAGTTGGTTGAACTAGACCTGG 58.597 50.000 0.00 0.00 43.52 4.45
882 1355 2.808543 GCAGTTGGTTGAACTAGACCTG 59.191 50.000 0.00 0.00 43.52 4.00
883 1356 2.706190 AGCAGTTGGTTGAACTAGACCT 59.294 45.455 0.00 0.00 43.52 3.85
884 1357 3.127425 AGCAGTTGGTTGAACTAGACC 57.873 47.619 0.00 0.00 43.52 3.85
885 1358 6.166982 AGAATAGCAGTTGGTTGAACTAGAC 58.833 40.000 0.00 0.00 43.52 2.59
886 1359 6.360370 AGAATAGCAGTTGGTTGAACTAGA 57.640 37.500 0.00 0.00 43.52 2.43
887 1360 7.440523 AAAGAATAGCAGTTGGTTGAACTAG 57.559 36.000 0.00 0.00 43.52 2.57
888 1361 7.117236 CGTAAAGAATAGCAGTTGGTTGAACTA 59.883 37.037 0.00 0.00 43.52 2.24
889 1362 6.073222 CGTAAAGAATAGCAGTTGGTTGAACT 60.073 38.462 0.00 0.00 46.52 3.01
890 1363 6.073440 TCGTAAAGAATAGCAGTTGGTTGAAC 60.073 38.462 0.00 0.00 34.40 3.18
891 1364 5.992829 TCGTAAAGAATAGCAGTTGGTTGAA 59.007 36.000 0.00 0.00 0.00 2.69
892 1365 5.543714 TCGTAAAGAATAGCAGTTGGTTGA 58.456 37.500 0.00 0.00 0.00 3.18
893 1366 5.408604 ACTCGTAAAGAATAGCAGTTGGTTG 59.591 40.000 0.00 0.00 0.00 3.77
894 1367 5.408604 CACTCGTAAAGAATAGCAGTTGGTT 59.591 40.000 0.00 0.00 0.00 3.67
895 1368 4.929808 CACTCGTAAAGAATAGCAGTTGGT 59.070 41.667 0.00 0.00 0.00 3.67
896 1369 4.929808 ACACTCGTAAAGAATAGCAGTTGG 59.070 41.667 0.00 0.00 0.00 3.77
897 1370 6.467723 AACACTCGTAAAGAATAGCAGTTG 57.532 37.500 0.00 0.00 0.00 3.16
914 1387 1.853319 CGTTGTGAGGCGAACACTC 59.147 57.895 11.96 0.00 38.81 3.51
915 1388 2.244651 GCGTTGTGAGGCGAACACT 61.245 57.895 11.96 0.00 38.81 3.55
916 1389 2.248431 GCGTTGTGAGGCGAACAC 59.752 61.111 0.00 0.00 38.55 3.32
917 1390 2.970324 GGCGTTGTGAGGCGAACA 60.970 61.111 0.00 0.00 37.53 3.18
922 1395 3.723348 GGAACGGCGTTGTGAGGC 61.723 66.667 31.90 14.18 35.97 4.70
923 1396 1.234615 ATTGGAACGGCGTTGTGAGG 61.235 55.000 31.90 0.00 0.00 3.86
924 1397 0.591170 AATTGGAACGGCGTTGTGAG 59.409 50.000 31.90 0.00 0.00 3.51
971 1449 3.488090 GGAGCGCGGAAACTTCGG 61.488 66.667 8.83 0.00 0.00 4.30
1093 1572 3.462501 GGGAGGGAGGGAGGGGAT 61.463 72.222 0.00 0.00 0.00 3.85
1095 1574 3.711782 AAGGGAGGGAGGGAGGGG 61.712 72.222 0.00 0.00 0.00 4.79
1102 1581 2.769095 CCTAAGTTCTGAAGGGAGGGAG 59.231 54.545 0.00 0.00 0.00 4.30
1181 1971 2.896801 CGCTACCAATCCGCATGGC 61.897 63.158 0.00 0.00 41.89 4.40
1329 2131 1.466167 CATGTGTGTAAGAGCTGTGCC 59.534 52.381 0.00 0.00 0.00 5.01
1359 2163 4.282950 CACGCATGCTAGAACAAATCAT 57.717 40.909 17.13 0.00 0.00 2.45
1444 2250 4.925836 TGGGGGATTTTAGACCAAAGTAC 58.074 43.478 0.00 0.00 0.00 2.73
1480 2286 1.084370 GGTTCATCACCTTCGCGGAG 61.084 60.000 7.67 7.67 43.29 4.63
1497 2309 3.788227 TCATTACAGGTCTGCAAAGGT 57.212 42.857 0.00 0.00 0.00 3.50
1598 2411 7.413657 GCAAGAAACTTGTTTACAGAGTGTACA 60.414 37.037 12.07 0.00 31.69 2.90
1599 2412 6.905609 GCAAGAAACTTGTTTACAGAGTGTAC 59.094 38.462 12.07 0.00 31.69 2.90
1611 2424 7.614124 AAATTGAACATGCAAGAAACTTGTT 57.386 28.000 12.07 0.00 37.90 2.83
1655 2469 2.309613 TGGCCATTCCATATGAAGCAC 58.690 47.619 0.00 0.00 40.72 4.40
1715 2529 5.591067 TCGACACCTTTGGTTTACTTCAAAT 59.409 36.000 0.00 0.00 31.02 2.32
1734 2549 2.029918 CAGATGACACCTCAACTCGACA 60.030 50.000 0.00 0.00 27.20 4.35
1801 2616 8.748582 CGAATACATCATTTCAATCAAACCATG 58.251 33.333 0.00 0.00 0.00 3.66
1857 2675 6.643770 GCAATCATTTCCGCAAGAATCATTAT 59.356 34.615 0.00 0.00 43.02 1.28
2046 2866 2.425312 ACTGGTCTGCTAGAACTCATCG 59.575 50.000 0.00 0.00 31.84 3.84
2124 2955 1.066605 CCTAGTGCAAATGCTCCATGC 59.933 52.381 6.97 0.00 42.66 4.06
2228 3172 4.039004 CAGTCAAGGTCATCAGATAGGAGG 59.961 50.000 0.00 0.00 0.00 4.30
2254 3198 5.940617 TGTTTCCATTCTCCAGAAAAGAGA 58.059 37.500 0.00 0.00 38.60 3.10
2274 3221 5.411781 TGAACAGCGGTAAAACAAAATGTT 58.588 33.333 0.00 0.00 43.41 2.71
2282 3229 6.254804 ACAATTTTCTTGAACAGCGGTAAAAC 59.745 34.615 0.00 0.00 0.00 2.43
2287 3235 3.380004 TGACAATTTTCTTGAACAGCGGT 59.620 39.130 0.00 0.00 0.00 5.68
2323 3276 4.881850 ACCAAATATCAATCTTCACCGTCC 59.118 41.667 0.00 0.00 0.00 4.79
2526 3483 8.573035 AGAAACTACAAAAACAAACAGAGTTCA 58.427 29.630 0.00 0.00 0.00 3.18
2550 3507 3.436704 CGAGCTTGCAGACCAATAAAAGA 59.563 43.478 0.00 0.00 31.91 2.52
2557 3514 2.032528 CCCGAGCTTGCAGACCAA 59.967 61.111 0.00 0.00 0.00 3.67
2591 3549 5.297547 TCACAGTTTGGTCATCTGAACTAC 58.702 41.667 0.00 0.00 31.58 2.73
2624 3582 7.987458 GTCAGATAGGAGTGAATGACCATTTTA 59.013 37.037 0.00 0.00 32.78 1.52
2630 3588 3.632604 TCGTCAGATAGGAGTGAATGACC 59.367 47.826 0.00 0.00 34.89 4.02
2634 3592 3.904717 AGGTCGTCAGATAGGAGTGAAT 58.095 45.455 0.00 0.00 0.00 2.57
2638 3596 3.432378 ACAAAGGTCGTCAGATAGGAGT 58.568 45.455 0.00 0.00 0.00 3.85
2793 3757 4.676546 GCAACTCAGCCAAATTAATCCTC 58.323 43.478 0.00 0.00 0.00 3.71
2822 3796 9.577222 TCAAATCATCATTATAGGCATCAGAAA 57.423 29.630 0.00 0.00 0.00 2.52
2873 3847 6.038161 TGGGACGACAAATATGAAATCATCAC 59.962 38.462 0.00 0.00 41.93 3.06
2894 3868 0.251653 AGCGGACACTAAGACTGGGA 60.252 55.000 0.00 0.00 0.00 4.37
2952 3926 9.807649 AATATCAAACCAATTCATTTACAGAGC 57.192 29.630 0.00 0.00 0.00 4.09
3021 4000 2.344535 GCACAGGGCACAAACTCAT 58.655 52.632 0.00 0.00 43.97 2.90
3090 4072 6.143559 TGTGGTTCCTGAACAACAGAGTAAC 61.144 44.000 14.71 0.00 46.94 2.50
3099 4081 3.278574 CAAGAGTGTGGTTCCTGAACAA 58.721 45.455 11.78 0.00 42.85 2.83
3152 4137 9.614792 GGAAACTATGGTATCTCAAAGTAACAT 57.385 33.333 0.00 0.00 33.16 2.71
3153 4138 7.762615 CGGAAACTATGGTATCTCAAAGTAACA 59.237 37.037 0.00 0.00 0.00 2.41
3154 4139 7.763071 ACGGAAACTATGGTATCTCAAAGTAAC 59.237 37.037 0.00 0.00 0.00 2.50
3155 4140 7.844009 ACGGAAACTATGGTATCTCAAAGTAA 58.156 34.615 0.00 0.00 0.00 2.24
3156 4141 7.414222 ACGGAAACTATGGTATCTCAAAGTA 57.586 36.000 0.00 0.00 0.00 2.24
3157 4142 6.295719 ACGGAAACTATGGTATCTCAAAGT 57.704 37.500 0.00 0.00 0.00 2.66
3158 4143 6.594159 ACAACGGAAACTATGGTATCTCAAAG 59.406 38.462 0.00 0.00 0.00 2.77
3159 4144 6.469410 ACAACGGAAACTATGGTATCTCAAA 58.531 36.000 0.00 0.00 0.00 2.69
3201 4186 2.223377 CGACAAGGCAGGTAAAACAGAC 59.777 50.000 0.00 0.00 0.00 3.51
3339 4492 2.808543 AGAAGTTTAAGGCAGTTCAGCG 59.191 45.455 0.00 0.00 34.64 5.18
3365 4518 9.338622 AGGCATGTTTAGTAGAATGGTTATAAC 57.661 33.333 7.09 7.09 0.00 1.89
3407 4693 9.902684 ATATGAAATCATCATCCTCTTGGATAC 57.097 33.333 0.00 0.00 45.91 2.24
3476 4765 5.715070 AGTCAGAATCCGAAGTAAGTCAAG 58.285 41.667 0.00 0.00 0.00 3.02
3484 4777 5.723672 TTTACAGAGTCAGAATCCGAAGT 57.276 39.130 0.00 0.00 0.00 3.01
3485 4778 6.333416 TCATTTACAGAGTCAGAATCCGAAG 58.667 40.000 0.00 0.00 0.00 3.79
3486 4779 6.280855 TCATTTACAGAGTCAGAATCCGAA 57.719 37.500 0.00 0.00 0.00 4.30
3487 4780 5.914898 TCATTTACAGAGTCAGAATCCGA 57.085 39.130 0.00 0.00 0.00 4.55
3488 4781 7.545362 AATTCATTTACAGAGTCAGAATCCG 57.455 36.000 0.00 0.00 0.00 4.18
3534 4828 6.238676 CCAGCTCAAGGACATAAATCAATCAG 60.239 42.308 0.00 0.00 0.00 2.90
3651 5110 4.313282 GGTTAATAATACTCCTCGGTGGC 58.687 47.826 0.00 0.00 35.26 5.01
3685 5144 0.890683 CCAAGGGAAACTCATGGTGC 59.109 55.000 0.00 0.00 0.00 5.01
3704 5163 8.864024 GGTAACTAAACAGAAACTAACGGATAC 58.136 37.037 0.00 0.00 0.00 2.24
3725 5266 3.380320 AGAACAAACAGCACCAAGGTAAC 59.620 43.478 0.00 0.00 0.00 2.50
3728 5269 1.750778 CAGAACAAACAGCACCAAGGT 59.249 47.619 0.00 0.00 0.00 3.50
3896 5440 5.801350 TCTCAAACCAATATTCAGCGAAG 57.199 39.130 0.00 0.00 0.00 3.79
4098 5654 6.884096 TGTGATCAACAATGAAACACAAAC 57.116 33.333 14.80 0.00 45.12 2.93
4135 5691 9.566432 ACAAATAAGGCATTAAAATTGAAACCA 57.434 25.926 16.45 0.00 0.00 3.67
4178 5735 8.672815 GTTTAGCTGAAGATAGAGAAGCAAAAT 58.327 33.333 0.00 0.00 36.32 1.82
4233 5790 1.450312 GGGTCCACGAGCATCCTTG 60.450 63.158 0.00 0.00 0.00 3.61
4286 5843 9.462174 CATTTTAAACAAGAGCTACAACAATGA 57.538 29.630 0.00 0.00 0.00 2.57
4307 5864 9.846248 GATTTATTCAGTCAACTGTAGCATTTT 57.154 29.630 9.82 0.00 44.12 1.82
4314 5871 8.708742 CGACAAAGATTTATTCAGTCAACTGTA 58.291 33.333 9.82 1.07 44.12 2.74
4319 5876 6.602179 CAGCGACAAAGATTTATTCAGTCAA 58.398 36.000 0.00 0.00 0.00 3.18
4409 5975 5.163561 CGGATTTTATACAATGGCCACTTGT 60.164 40.000 26.21 26.21 39.93 3.16
4549 6115 5.515270 GCATAGAAATTTGTAAAACGGAGGC 59.485 40.000 0.00 0.00 0.00 4.70
4668 6234 2.676076 CGGCAAAATCTTTCCAGGTTG 58.324 47.619 0.00 0.00 0.00 3.77
4732 6298 4.441087 GCCTCTTTTTCAAACTTAAGCACG 59.559 41.667 1.29 0.00 0.00 5.34
4764 6330 5.647589 TGGAGCGGTCGTATTATTATCATC 58.352 41.667 8.77 0.00 0.00 2.92
4765 6331 5.185249 ACTGGAGCGGTCGTATTATTATCAT 59.815 40.000 8.77 0.00 0.00 2.45
4766 6332 4.521639 ACTGGAGCGGTCGTATTATTATCA 59.478 41.667 8.77 0.00 0.00 2.15
4805 6371 0.618458 TTTATGGAAGGCACTCCGCT 59.382 50.000 1.71 0.00 38.49 5.52
4833 6402 4.127171 CCCGTTTCCATTGTAGGAGTATG 58.873 47.826 0.00 0.00 39.25 2.39
4849 6418 4.563976 CGTTTGTATCTATCGTTCCCGTTT 59.436 41.667 0.00 0.00 35.01 3.60
4854 6426 6.823678 ATTCACGTTTGTATCTATCGTTCC 57.176 37.500 0.00 0.00 32.47 3.62
4866 6438 6.137415 CGGTATTGTGTTAATTCACGTTTGT 58.863 36.000 0.00 0.00 40.74 2.83
4942 6524 0.886563 GGACCGGAGAAGAAGAACGA 59.113 55.000 9.46 0.00 0.00 3.85
4943 6525 0.889306 AGGACCGGAGAAGAAGAACG 59.111 55.000 9.46 0.00 0.00 3.95
4947 6529 3.491792 GCATAGAAGGACCGGAGAAGAAG 60.492 52.174 9.46 0.00 0.00 2.85
4990 6572 7.698550 CAGATAGACTGCGATGGTACATATTAC 59.301 40.741 0.00 0.00 41.11 1.89
4991 6573 7.762382 CAGATAGACTGCGATGGTACATATTA 58.238 38.462 0.00 0.00 41.11 0.98
4992 6574 6.625362 CAGATAGACTGCGATGGTACATATT 58.375 40.000 0.00 0.00 41.11 1.28
4993 6575 6.201226 CAGATAGACTGCGATGGTACATAT 57.799 41.667 0.00 0.00 41.11 1.78
4994 6576 5.629079 CAGATAGACTGCGATGGTACATA 57.371 43.478 0.00 0.00 41.11 2.29
4995 6577 4.511617 CAGATAGACTGCGATGGTACAT 57.488 45.455 0.00 0.00 41.11 2.29
4996 6578 3.990318 CAGATAGACTGCGATGGTACA 57.010 47.619 0.00 0.00 41.06 2.90
5006 6588 8.108235 GCAAGGGCATAACAACAGATAGACTG 62.108 46.154 0.00 0.00 45.14 3.51
5007 6589 5.431765 CAAGGGCATAACAACAGATAGACT 58.568 41.667 0.00 0.00 0.00 3.24
5008 6590 4.035675 GCAAGGGCATAACAACAGATAGAC 59.964 45.833 0.00 0.00 40.72 2.59
5009 6591 4.199310 GCAAGGGCATAACAACAGATAGA 58.801 43.478 0.00 0.00 40.72 1.98
5010 6592 3.316308 GGCAAGGGCATAACAACAGATAG 59.684 47.826 0.00 0.00 43.71 2.08
5011 6593 3.053693 AGGCAAGGGCATAACAACAGATA 60.054 43.478 0.00 0.00 43.71 1.98
5012 6594 2.102578 GGCAAGGGCATAACAACAGAT 58.897 47.619 0.00 0.00 43.71 2.90
5013 6595 1.075374 AGGCAAGGGCATAACAACAGA 59.925 47.619 0.00 0.00 43.71 3.41
5014 6596 1.203052 CAGGCAAGGGCATAACAACAG 59.797 52.381 0.00 0.00 43.71 3.16
5015 6597 1.255882 CAGGCAAGGGCATAACAACA 58.744 50.000 0.00 0.00 43.71 3.33
5016 6598 0.532115 CCAGGCAAGGGCATAACAAC 59.468 55.000 0.00 0.00 43.71 3.32
5017 6599 2.974623 CCAGGCAAGGGCATAACAA 58.025 52.632 0.00 0.00 43.71 2.83
5018 6600 4.762016 CCAGGCAAGGGCATAACA 57.238 55.556 0.00 0.00 43.71 2.41
5029 6611 7.559533 TCAAGAGTTATATAAATTTGCCAGGCA 59.440 33.333 11.22 11.22 36.47 4.75
5030 6612 7.862873 GTCAAGAGTTATATAAATTTGCCAGGC 59.137 37.037 3.66 3.66 0.00 4.85
5031 6613 9.125026 AGTCAAGAGTTATATAAATTTGCCAGG 57.875 33.333 0.00 0.00 0.00 4.45
5032 6614 9.941664 CAGTCAAGAGTTATATAAATTTGCCAG 57.058 33.333 0.00 0.00 0.00 4.85
5033 6615 8.405531 GCAGTCAAGAGTTATATAAATTTGCCA 58.594 33.333 0.00 0.00 0.00 4.92
5034 6616 7.587757 CGCAGTCAAGAGTTATATAAATTTGCC 59.412 37.037 0.00 0.00 0.00 4.52
5035 6617 8.122952 ACGCAGTCAAGAGTTATATAAATTTGC 58.877 33.333 0.00 1.43 29.74 3.68
5036 6618 9.988350 AACGCAGTCAAGAGTTATATAAATTTG 57.012 29.630 0.00 4.59 45.00 2.32
5037 6619 9.988350 CAACGCAGTCAAGAGTTATATAAATTT 57.012 29.630 0.00 0.00 45.00 1.82
5038 6620 9.378551 TCAACGCAGTCAAGAGTTATATAAATT 57.621 29.630 0.00 0.00 45.00 1.82
5039 6621 8.942338 TCAACGCAGTCAAGAGTTATATAAAT 57.058 30.769 0.00 0.00 45.00 1.40
5040 6622 8.942338 ATCAACGCAGTCAAGAGTTATATAAA 57.058 30.769 0.00 0.00 45.00 1.40
5042 6624 9.459640 GTTATCAACGCAGTCAAGAGTTATATA 57.540 33.333 0.00 0.00 45.00 0.86
5043 6625 7.438459 GGTTATCAACGCAGTCAAGAGTTATAT 59.562 37.037 0.00 0.00 45.00 0.86
5044 6626 6.755141 GGTTATCAACGCAGTCAAGAGTTATA 59.245 38.462 0.00 0.00 45.00 0.98
5045 6627 5.581085 GGTTATCAACGCAGTCAAGAGTTAT 59.419 40.000 0.00 0.00 45.00 1.89
5046 6628 4.927425 GGTTATCAACGCAGTCAAGAGTTA 59.073 41.667 0.00 0.00 45.00 2.24
5047 6629 3.746492 GGTTATCAACGCAGTCAAGAGTT 59.254 43.478 0.00 0.00 45.00 3.01
5048 6630 3.006967 AGGTTATCAACGCAGTCAAGAGT 59.993 43.478 0.00 0.00 45.00 3.24
5049 6631 3.369147 CAGGTTATCAACGCAGTCAAGAG 59.631 47.826 0.00 0.00 45.00 2.85
5050 6632 3.325870 CAGGTTATCAACGCAGTCAAGA 58.674 45.455 0.00 0.00 45.00 3.02
5051 6633 2.416547 CCAGGTTATCAACGCAGTCAAG 59.583 50.000 0.00 0.00 45.00 3.02
5052 6634 2.037902 TCCAGGTTATCAACGCAGTCAA 59.962 45.455 0.00 0.00 45.00 3.18
5053 6635 1.621317 TCCAGGTTATCAACGCAGTCA 59.379 47.619 0.00 0.00 45.00 3.41
5054 6636 2.380084 TCCAGGTTATCAACGCAGTC 57.620 50.000 0.00 0.00 45.00 3.51
5056 6638 3.334691 TCTTTCCAGGTTATCAACGCAG 58.665 45.455 0.00 0.00 0.00 5.18
5057 6639 3.410631 TCTTTCCAGGTTATCAACGCA 57.589 42.857 0.00 0.00 0.00 5.24
5058 6640 3.689649 ACATCTTTCCAGGTTATCAACGC 59.310 43.478 0.00 0.00 0.00 4.84
5059 6641 5.411361 TCAACATCTTTCCAGGTTATCAACG 59.589 40.000 0.00 0.00 0.00 4.10
5060 6642 6.612306 GTCAACATCTTTCCAGGTTATCAAC 58.388 40.000 0.00 0.00 0.00 3.18
5061 6643 5.411361 CGTCAACATCTTTCCAGGTTATCAA 59.589 40.000 0.00 0.00 0.00 2.57
5062 6644 4.935205 CGTCAACATCTTTCCAGGTTATCA 59.065 41.667 0.00 0.00 0.00 2.15
5063 6645 4.201822 GCGTCAACATCTTTCCAGGTTATC 60.202 45.833 0.00 0.00 0.00 1.75
5064 6646 3.689649 GCGTCAACATCTTTCCAGGTTAT 59.310 43.478 0.00 0.00 0.00 1.89
5065 6647 3.071479 GCGTCAACATCTTTCCAGGTTA 58.929 45.455 0.00 0.00 0.00 2.85
5066 6648 1.880027 GCGTCAACATCTTTCCAGGTT 59.120 47.619 0.00 0.00 0.00 3.50
5067 6649 1.072331 AGCGTCAACATCTTTCCAGGT 59.928 47.619 0.00 0.00 0.00 4.00
5068 6650 1.734465 GAGCGTCAACATCTTTCCAGG 59.266 52.381 0.00 0.00 0.00 4.45
5069 6651 2.416747 TGAGCGTCAACATCTTTCCAG 58.583 47.619 0.00 0.00 0.00 3.86
5070 6652 2.542020 TGAGCGTCAACATCTTTCCA 57.458 45.000 0.00 0.00 0.00 3.53
5071 6653 4.425577 AATTGAGCGTCAACATCTTTCC 57.574 40.909 3.13 0.00 39.45 3.13
5072 6654 5.215160 ACAAATTGAGCGTCAACATCTTTC 58.785 37.500 0.00 0.00 39.45 2.62
5073 6655 5.186996 ACAAATTGAGCGTCAACATCTTT 57.813 34.783 0.00 0.00 39.45 2.52
5074 6656 4.611355 CGACAAATTGAGCGTCAACATCTT 60.611 41.667 0.00 0.00 39.45 2.40
5075 6657 3.120546 CGACAAATTGAGCGTCAACATCT 60.121 43.478 0.00 0.00 39.45 2.90
5076 6658 3.155998 CGACAAATTGAGCGTCAACATC 58.844 45.455 0.00 0.16 39.45 3.06
5077 6659 2.548057 ACGACAAATTGAGCGTCAACAT 59.452 40.909 11.33 0.00 39.45 2.71
5078 6660 1.937223 ACGACAAATTGAGCGTCAACA 59.063 42.857 11.33 0.00 39.45 3.33
5079 6661 2.663279 ACGACAAATTGAGCGTCAAC 57.337 45.000 11.33 0.00 39.45 3.18
5080 6662 2.348125 CGAACGACAAATTGAGCGTCAA 60.348 45.455 15.70 3.49 41.09 3.18
5081 6663 1.191425 CGAACGACAAATTGAGCGTCA 59.809 47.619 15.70 0.00 32.88 4.35
5082 6664 1.454276 TCGAACGACAAATTGAGCGTC 59.546 47.619 15.70 10.23 32.88 5.19
5083 6665 1.191647 GTCGAACGACAAATTGAGCGT 59.808 47.619 20.00 11.33 44.02 5.07
5084 6666 1.455786 AGTCGAACGACAAATTGAGCG 59.544 47.619 25.13 5.75 46.76 5.03
5085 6667 2.475111 TCAGTCGAACGACAAATTGAGC 59.525 45.455 25.13 0.00 46.76 4.26
5086 6668 3.981416 TCTCAGTCGAACGACAAATTGAG 59.019 43.478 24.57 24.57 46.76 3.02
5087 6669 3.734231 GTCTCAGTCGAACGACAAATTGA 59.266 43.478 25.13 18.69 46.76 2.57
5088 6670 3.736252 AGTCTCAGTCGAACGACAAATTG 59.264 43.478 25.13 16.04 46.76 2.32
5089 6671 3.978687 AGTCTCAGTCGAACGACAAATT 58.021 40.909 25.13 5.70 46.76 1.82
5090 6672 3.644884 AGTCTCAGTCGAACGACAAAT 57.355 42.857 25.13 6.03 46.76 2.32
5091 6673 3.431922 AAGTCTCAGTCGAACGACAAA 57.568 42.857 25.13 13.64 46.76 2.83
5092 6674 3.113322 CAAAGTCTCAGTCGAACGACAA 58.887 45.455 25.13 13.94 46.76 3.18
5093 6675 2.098607 ACAAAGTCTCAGTCGAACGACA 59.901 45.455 25.13 8.33 46.76 4.35
5094 6676 2.728922 ACAAAGTCTCAGTCGAACGAC 58.271 47.619 17.79 17.79 44.86 4.34
5095 6677 3.431922 AACAAAGTCTCAGTCGAACGA 57.568 42.857 0.00 0.00 0.00 3.85
5096 6678 4.680110 ACATAACAAAGTCTCAGTCGAACG 59.320 41.667 0.00 0.00 0.00 3.95
5097 6679 5.118817 GGACATAACAAAGTCTCAGTCGAAC 59.881 44.000 0.00 0.00 35.18 3.95
5098 6680 5.227908 GGACATAACAAAGTCTCAGTCGAA 58.772 41.667 0.00 0.00 35.18 3.71
5099 6681 4.321750 GGGACATAACAAAGTCTCAGTCGA 60.322 45.833 0.00 0.00 35.33 4.20
5100 6682 3.927142 GGGACATAACAAAGTCTCAGTCG 59.073 47.826 0.00 0.00 35.33 4.18
5101 6683 4.894784 TGGGACATAACAAAGTCTCAGTC 58.105 43.478 0.00 0.00 40.15 3.51
5102 6684 4.974645 TGGGACATAACAAAGTCTCAGT 57.025 40.909 0.00 0.00 40.15 3.41
5104 6686 4.974645 ACTGGGACATAACAAAGTCTCA 57.025 40.909 0.00 0.00 42.61 3.27
5105 6687 5.305585 TCAACTGGGACATAACAAAGTCTC 58.694 41.667 0.00 0.00 38.20 3.36
5106 6688 5.304686 TCAACTGGGACATAACAAAGTCT 57.695 39.130 0.00 0.00 38.20 3.24
5107 6689 7.865706 ATATCAACTGGGACATAACAAAGTC 57.134 36.000 0.00 0.00 38.20 3.01
5108 6690 9.920946 AATATATCAACTGGGACATAACAAAGT 57.079 29.630 0.00 0.00 38.20 2.66
5110 6692 9.913310 TGAATATATCAACTGGGACATAACAAA 57.087 29.630 0.00 0.00 33.53 2.83
5111 6693 9.337396 GTGAATATATCAACTGGGACATAACAA 57.663 33.333 0.00 0.00 40.50 2.83
5112 6694 8.490311 TGTGAATATATCAACTGGGACATAACA 58.510 33.333 0.00 0.00 40.50 2.41
5113 6695 8.902540 TGTGAATATATCAACTGGGACATAAC 57.097 34.615 0.00 0.00 40.50 1.89
5117 6699 9.725019 GATATTGTGAATATATCAACTGGGACA 57.275 33.333 0.00 0.00 40.50 4.02
5118 6700 9.950496 AGATATTGTGAATATATCAACTGGGAC 57.050 33.333 0.00 0.00 40.50 4.46
5147 6729 8.712285 AAGGAAATTTTGCATACATCTCAATG 57.288 30.769 3.39 0.00 38.93 2.82
5148 6730 8.755977 AGAAGGAAATTTTGCATACATCTCAAT 58.244 29.630 3.39 0.00 0.00 2.57
5149 6731 8.125978 AGAAGGAAATTTTGCATACATCTCAA 57.874 30.769 3.39 0.00 0.00 3.02
5150 6732 7.707624 AGAAGGAAATTTTGCATACATCTCA 57.292 32.000 3.39 0.00 0.00 3.27
5151 6733 8.465201 AGAAGAAGGAAATTTTGCATACATCTC 58.535 33.333 3.39 0.00 0.00 2.75
5152 6734 8.358582 AGAAGAAGGAAATTTTGCATACATCT 57.641 30.769 3.39 0.18 0.00 2.90
5153 6735 8.992835 AAGAAGAAGGAAATTTTGCATACATC 57.007 30.769 3.39 0.00 0.00 3.06
5154 6736 9.428097 GAAAGAAGAAGGAAATTTTGCATACAT 57.572 29.630 3.39 0.00 0.00 2.29
5155 6737 8.641541 AGAAAGAAGAAGGAAATTTTGCATACA 58.358 29.630 3.39 0.00 0.00 2.29
5156 6738 9.481340 AAGAAAGAAGAAGGAAATTTTGCATAC 57.519 29.630 3.39 0.00 0.00 2.39
5157 6739 9.696917 GAAGAAAGAAGAAGGAAATTTTGCATA 57.303 29.630 3.39 0.00 0.00 3.14
5158 6740 8.427276 AGAAGAAAGAAGAAGGAAATTTTGCAT 58.573 29.630 3.39 0.00 0.00 3.96
5159 6741 7.785033 AGAAGAAAGAAGAAGGAAATTTTGCA 58.215 30.769 3.39 0.00 0.00 4.08
5160 6742 8.654230 AAGAAGAAAGAAGAAGGAAATTTTGC 57.346 30.769 0.00 0.00 0.00 3.68
5193 6775 9.098355 GCTAGATCACAGTAAAATGACATAACA 57.902 33.333 0.00 0.00 0.00 2.41
5194 6776 8.552034 GGCTAGATCACAGTAAAATGACATAAC 58.448 37.037 0.00 0.00 0.00 1.89
5195 6777 8.264347 TGGCTAGATCACAGTAAAATGACATAA 58.736 33.333 0.00 0.00 0.00 1.90
5196 6778 7.710907 GTGGCTAGATCACAGTAAAATGACATA 59.289 37.037 10.54 0.00 35.39 2.29
5197 6779 6.540189 GTGGCTAGATCACAGTAAAATGACAT 59.460 38.462 10.54 0.00 35.39 3.06
5198 6780 5.874810 GTGGCTAGATCACAGTAAAATGACA 59.125 40.000 10.54 0.00 35.39 3.58
5199 6781 5.874810 TGTGGCTAGATCACAGTAAAATGAC 59.125 40.000 13.17 0.00 39.83 3.06
5200 6782 5.874810 GTGTGGCTAGATCACAGTAAAATGA 59.125 40.000 16.34 0.00 44.52 2.57
5201 6783 5.065218 GGTGTGGCTAGATCACAGTAAAATG 59.935 44.000 16.34 0.00 44.52 2.32
5202 6784 5.186198 GGTGTGGCTAGATCACAGTAAAAT 58.814 41.667 16.34 0.00 44.52 1.82
5203 6785 4.564821 GGGTGTGGCTAGATCACAGTAAAA 60.565 45.833 16.34 0.00 44.52 1.52
5204 6786 3.055385 GGGTGTGGCTAGATCACAGTAAA 60.055 47.826 16.34 0.00 44.52 2.01
5205 6787 2.500098 GGGTGTGGCTAGATCACAGTAA 59.500 50.000 16.34 0.00 44.52 2.24
5206 6788 2.108168 GGGTGTGGCTAGATCACAGTA 58.892 52.381 16.34 0.00 44.52 2.74
5207 6789 0.905357 GGGTGTGGCTAGATCACAGT 59.095 55.000 16.34 0.00 44.52 3.55
5208 6790 1.198713 AGGGTGTGGCTAGATCACAG 58.801 55.000 16.34 0.00 44.52 3.66
5209 6791 1.278985 CAAGGGTGTGGCTAGATCACA 59.721 52.381 13.17 13.17 42.11 3.58
5210 6792 1.407437 CCAAGGGTGTGGCTAGATCAC 60.407 57.143 9.00 9.00 35.82 3.06
5211 6793 0.911769 CCAAGGGTGTGGCTAGATCA 59.088 55.000 0.00 0.00 0.00 2.92
5212 6794 0.912486 ACCAAGGGTGTGGCTAGATC 59.088 55.000 0.00 0.00 43.00 2.75
5213 6795 0.912486 GACCAAGGGTGTGGCTAGAT 59.088 55.000 0.00 0.00 43.00 1.98
5214 6796 1.541310 CGACCAAGGGTGTGGCTAGA 61.541 60.000 0.00 0.00 43.00 2.43
5215 6797 1.079127 CGACCAAGGGTGTGGCTAG 60.079 63.158 0.00 0.00 43.00 3.42
5216 6798 1.412453 AACGACCAAGGGTGTGGCTA 61.412 55.000 0.00 0.00 43.00 3.93
5217 6799 2.676163 GAACGACCAAGGGTGTGGCT 62.676 60.000 0.00 0.00 43.00 4.75
5218 6800 2.203294 AACGACCAAGGGTGTGGC 60.203 61.111 0.00 0.00 43.00 5.01
5219 6801 1.959226 CGAACGACCAAGGGTGTGG 60.959 63.158 0.00 0.00 44.92 4.17
5220 6802 0.812412 AACGAACGACCAAGGGTGTG 60.812 55.000 0.14 0.00 35.25 3.82
5221 6803 0.531311 GAACGAACGACCAAGGGTGT 60.531 55.000 0.14 0.00 35.25 4.16
5222 6804 0.249741 AGAACGAACGACCAAGGGTG 60.250 55.000 0.14 0.00 35.25 4.61
5223 6805 0.466963 AAGAACGAACGACCAAGGGT 59.533 50.000 0.14 0.00 39.44 4.34
5224 6806 1.145803 GAAGAACGAACGACCAAGGG 58.854 55.000 0.14 0.00 0.00 3.95
5225 6807 2.150397 AGAAGAACGAACGACCAAGG 57.850 50.000 0.14 0.00 0.00 3.61
5226 6808 2.153247 CGAAGAAGAACGAACGACCAAG 59.847 50.000 0.14 0.00 0.00 3.61
5227 6809 2.121786 CGAAGAAGAACGAACGACCAA 58.878 47.619 0.14 0.00 0.00 3.67
5228 6810 1.066002 ACGAAGAAGAACGAACGACCA 59.934 47.619 0.14 0.00 0.00 4.02
5229 6811 1.763634 ACGAAGAAGAACGAACGACC 58.236 50.000 0.14 0.00 0.00 4.79
5230 6812 3.000376 ACAAACGAAGAAGAACGAACGAC 60.000 43.478 0.14 0.00 0.00 4.34
5231 6813 3.181397 ACAAACGAAGAAGAACGAACGA 58.819 40.909 0.14 0.00 0.00 3.85
5232 6814 3.564408 ACAAACGAAGAAGAACGAACG 57.436 42.857 0.00 0.00 0.00 3.95
5233 6815 5.140077 AGAACAAACGAAGAAGAACGAAC 57.860 39.130 0.00 0.00 0.00 3.95
5234 6816 5.349270 TGAAGAACAAACGAAGAAGAACGAA 59.651 36.000 0.00 0.00 0.00 3.85
5235 6817 4.865925 TGAAGAACAAACGAAGAAGAACGA 59.134 37.500 0.00 0.00 0.00 3.85
5236 6818 5.138800 TGAAGAACAAACGAAGAAGAACG 57.861 39.130 0.00 0.00 0.00 3.95
5237 6819 5.396654 GCATGAAGAACAAACGAAGAAGAAC 59.603 40.000 0.00 0.00 0.00 3.01
5238 6820 5.510671 GCATGAAGAACAAACGAAGAAGAA 58.489 37.500 0.00 0.00 0.00 2.52
5239 6821 4.318760 CGCATGAAGAACAAACGAAGAAGA 60.319 41.667 0.00 0.00 34.38 2.87
5240 6822 3.902465 CGCATGAAGAACAAACGAAGAAG 59.098 43.478 0.00 0.00 34.38 2.85
5241 6823 3.558006 TCGCATGAAGAACAAACGAAGAA 59.442 39.130 0.00 0.00 37.11 2.52
5242 6824 3.059868 GTCGCATGAAGAACAAACGAAGA 60.060 43.478 0.00 0.00 39.96 2.87
5243 6825 3.218398 GTCGCATGAAGAACAAACGAAG 58.782 45.455 0.00 0.00 39.96 3.79
5244 6826 2.032377 GGTCGCATGAAGAACAAACGAA 60.032 45.455 0.00 0.00 39.96 3.85
5245 6827 1.529438 GGTCGCATGAAGAACAAACGA 59.471 47.619 0.00 0.00 37.48 3.85
5246 6828 1.262950 TGGTCGCATGAAGAACAAACG 59.737 47.619 6.85 0.00 31.60 3.60
5247 6829 3.300009 CTTGGTCGCATGAAGAACAAAC 58.700 45.455 18.41 0.00 43.68 2.93
5248 6830 2.293122 CCTTGGTCGCATGAAGAACAAA 59.707 45.455 18.41 7.18 43.68 2.83
5249 6831 1.879380 CCTTGGTCGCATGAAGAACAA 59.121 47.619 17.34 17.34 42.34 2.83
5250 6832 1.071542 TCCTTGGTCGCATGAAGAACA 59.928 47.619 0.00 0.24 32.86 3.18
5251 6833 1.808411 TCCTTGGTCGCATGAAGAAC 58.192 50.000 0.00 0.00 0.00 3.01
5252 6834 2.151202 GTTCCTTGGTCGCATGAAGAA 58.849 47.619 0.00 0.00 0.00 2.52
5253 6835 1.610624 GGTTCCTTGGTCGCATGAAGA 60.611 52.381 0.00 0.00 0.00 2.87
5254 6836 0.804989 GGTTCCTTGGTCGCATGAAG 59.195 55.000 0.00 0.00 0.00 3.02
5255 6837 0.109532 TGGTTCCTTGGTCGCATGAA 59.890 50.000 0.00 0.00 0.00 2.57
5256 6838 0.605319 GTGGTTCCTTGGTCGCATGA 60.605 55.000 0.00 0.00 0.00 3.07
5257 6839 0.606401 AGTGGTTCCTTGGTCGCATG 60.606 55.000 0.00 0.00 0.00 4.06
5258 6840 0.110486 AAGTGGTTCCTTGGTCGCAT 59.890 50.000 0.00 0.00 0.00 4.73
5259 6841 0.759959 TAAGTGGTTCCTTGGTCGCA 59.240 50.000 0.00 0.00 0.00 5.10
5260 6842 1.439679 CTAAGTGGTTCCTTGGTCGC 58.560 55.000 0.00 0.00 0.00 5.19
5261 6843 1.944430 GCCTAAGTGGTTCCTTGGTCG 60.944 57.143 0.00 0.00 38.35 4.79
5262 6844 1.613520 GGCCTAAGTGGTTCCTTGGTC 60.614 57.143 0.00 0.00 38.35 4.02
5263 6845 0.404426 GGCCTAAGTGGTTCCTTGGT 59.596 55.000 0.00 0.00 38.35 3.67
5264 6846 0.676782 CGGCCTAAGTGGTTCCTTGG 60.677 60.000 0.00 0.00 38.35 3.61
5265 6847 0.036306 ACGGCCTAAGTGGTTCCTTG 59.964 55.000 0.00 0.00 38.35 3.61
5266 6848 0.036306 CACGGCCTAAGTGGTTCCTT 59.964 55.000 0.00 0.00 38.35 3.36
5267 6849 0.834687 TCACGGCCTAAGTGGTTCCT 60.835 55.000 9.10 0.00 39.86 3.36
5268 6850 0.252197 ATCACGGCCTAAGTGGTTCC 59.748 55.000 9.10 0.00 39.86 3.62
5269 6851 1.737793 CAATCACGGCCTAAGTGGTTC 59.262 52.381 4.92 0.00 40.57 3.62
5270 6852 1.349688 TCAATCACGGCCTAAGTGGTT 59.650 47.619 9.10 5.76 42.99 3.67
5271 6853 0.981183 TCAATCACGGCCTAAGTGGT 59.019 50.000 9.10 0.00 39.86 4.16
5272 6854 2.107950 TTCAATCACGGCCTAAGTGG 57.892 50.000 9.10 0.00 39.86 4.00
5273 6855 3.440173 ACAATTCAATCACGGCCTAAGTG 59.560 43.478 0.00 1.31 40.71 3.16
5274 6856 3.686016 ACAATTCAATCACGGCCTAAGT 58.314 40.909 0.00 0.00 0.00 2.24
5275 6857 3.242413 CGACAATTCAATCACGGCCTAAG 60.242 47.826 0.00 0.00 0.00 2.18
5276 6858 2.675844 CGACAATTCAATCACGGCCTAA 59.324 45.455 0.00 0.00 0.00 2.69
5277 6859 2.276201 CGACAATTCAATCACGGCCTA 58.724 47.619 0.00 0.00 0.00 3.93
5278 6860 1.086696 CGACAATTCAATCACGGCCT 58.913 50.000 0.00 0.00 0.00 5.19
5279 6861 0.802494 ACGACAATTCAATCACGGCC 59.198 50.000 0.00 0.00 0.00 6.13
5280 6862 1.196808 ACACGACAATTCAATCACGGC 59.803 47.619 0.00 0.00 0.00 5.68
5281 6863 3.536158 AACACGACAATTCAATCACGG 57.464 42.857 0.00 0.00 0.00 4.94
5282 6864 3.906008 GGAAACACGACAATTCAATCACG 59.094 43.478 0.00 0.00 0.00 4.35
5283 6865 5.049405 AGAGGAAACACGACAATTCAATCAC 60.049 40.000 0.00 0.00 0.00 3.06
5284 6866 5.063204 AGAGGAAACACGACAATTCAATCA 58.937 37.500 0.00 0.00 0.00 2.57
5285 6867 5.613358 AGAGGAAACACGACAATTCAATC 57.387 39.130 0.00 0.00 0.00 2.67
5286 6868 7.687941 ATTAGAGGAAACACGACAATTCAAT 57.312 32.000 0.00 0.00 0.00 2.57
5287 6869 7.658167 TGTATTAGAGGAAACACGACAATTCAA 59.342 33.333 0.00 0.00 0.00 2.69
5288 6870 7.117236 GTGTATTAGAGGAAACACGACAATTCA 59.883 37.037 0.00 0.00 33.60 2.57
5289 6871 7.412672 GGTGTATTAGAGGAAACACGACAATTC 60.413 40.741 0.00 0.00 42.45 2.17
5290 6872 6.370718 GGTGTATTAGAGGAAACACGACAATT 59.629 38.462 0.00 0.00 42.45 2.32
5291 6873 5.873164 GGTGTATTAGAGGAAACACGACAAT 59.127 40.000 0.00 0.00 42.45 2.71
5292 6874 5.011329 AGGTGTATTAGAGGAAACACGACAA 59.989 40.000 0.00 0.00 42.45 3.18
5293 6875 4.525487 AGGTGTATTAGAGGAAACACGACA 59.475 41.667 0.00 0.00 42.45 4.35
5294 6876 4.863131 CAGGTGTATTAGAGGAAACACGAC 59.137 45.833 0.00 0.00 42.45 4.34
5295 6877 4.525487 ACAGGTGTATTAGAGGAAACACGA 59.475 41.667 0.00 0.00 42.45 4.35
5296 6878 4.817517 ACAGGTGTATTAGAGGAAACACG 58.182 43.478 0.00 0.00 42.45 4.49
5297 6879 8.611654 TTTTACAGGTGTATTAGAGGAAACAC 57.388 34.615 0.00 0.00 41.14 3.32
5315 6897 5.277828 GCCGAGGCCTGTATTTATTTTACAG 60.278 44.000 12.00 4.29 43.97 2.74
5316 6898 4.577283 GCCGAGGCCTGTATTTATTTTACA 59.423 41.667 12.00 0.00 34.56 2.41
5317 6899 4.820173 AGCCGAGGCCTGTATTTATTTTAC 59.180 41.667 12.00 0.00 43.17 2.01
5318 6900 5.043737 AGCCGAGGCCTGTATTTATTTTA 57.956 39.130 12.00 0.00 43.17 1.52
5319 6901 3.883489 GAGCCGAGGCCTGTATTTATTTT 59.117 43.478 12.00 0.00 43.17 1.82
5320 6902 3.477530 GAGCCGAGGCCTGTATTTATTT 58.522 45.455 12.00 0.00 43.17 1.40
5321 6903 2.548067 CGAGCCGAGGCCTGTATTTATT 60.548 50.000 12.00 0.00 43.17 1.40
5322 6904 1.000955 CGAGCCGAGGCCTGTATTTAT 59.999 52.381 12.00 0.00 43.17 1.40
5323 6905 0.387929 CGAGCCGAGGCCTGTATTTA 59.612 55.000 12.00 0.00 43.17 1.40
5324 6906 1.144057 CGAGCCGAGGCCTGTATTT 59.856 57.895 12.00 0.00 43.17 1.40
5325 6907 2.017559 GACGAGCCGAGGCCTGTATT 62.018 60.000 12.00 0.00 43.17 1.89
5326 6908 2.442272 ACGAGCCGAGGCCTGTAT 60.442 61.111 12.00 0.00 43.17 2.29
5327 6909 3.138798 GACGAGCCGAGGCCTGTA 61.139 66.667 12.00 0.00 43.17 2.74
5331 6913 4.736896 AAACGACGAGCCGAGGCC 62.737 66.667 10.95 0.00 43.17 5.19
5332 6914 3.179939 GAAACGACGAGCCGAGGC 61.180 66.667 5.89 5.89 42.33 4.70
5333 6915 2.874780 CGAAACGACGAGCCGAGG 60.875 66.667 0.00 0.00 35.09 4.63
5334 6916 1.273455 AAACGAAACGACGAGCCGAG 61.273 55.000 0.00 0.00 37.03 4.63
5335 6917 1.270777 GAAACGAAACGACGAGCCGA 61.271 55.000 0.00 0.00 37.03 5.54
5336 6918 1.127225 GAAACGAAACGACGAGCCG 59.873 57.895 0.00 3.91 37.03 5.52
5337 6919 1.216941 TGGAAACGAAACGACGAGCC 61.217 55.000 0.00 6.68 37.03 4.70
5338 6920 0.161024 CTGGAAACGAAACGACGAGC 59.839 55.000 0.00 0.00 37.03 5.03
5339 6921 0.161024 GCTGGAAACGAAACGACGAG 59.839 55.000 0.00 0.00 37.03 4.18
5340 6922 1.216941 GGCTGGAAACGAAACGACGA 61.217 55.000 0.00 0.00 37.03 4.20
5341 6923 1.203313 GGCTGGAAACGAAACGACG 59.797 57.895 0.00 0.00 39.31 5.12
5342 6924 1.203313 CGGCTGGAAACGAAACGAC 59.797 57.895 0.00 0.00 0.00 4.34
5343 6925 1.067749 TCGGCTGGAAACGAAACGA 59.932 52.632 0.00 0.00 36.01 3.85
5344 6926 3.632700 TCGGCTGGAAACGAAACG 58.367 55.556 0.00 0.00 36.01 3.60


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.