Multiple sequence alignment - TraesCS2D01G359800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G359800 chr2D 100.000 5285 0 0 1 5285 461550454 461545170 0.000000e+00 9760
1 TraesCS2D01G359800 chr2D 94.641 765 32 5 1 764 293781294 293780538 0.000000e+00 1177
2 TraesCS2D01G359800 chr2A 94.217 3389 189 7 996 4381 606679845 606676461 0.000000e+00 5166
3 TraesCS2D01G359800 chr2A 90.744 605 31 12 4686 5285 606676231 606675647 0.000000e+00 784
4 TraesCS2D01G359800 chr2A 77.435 421 58 20 347 748 718108178 718108580 3.210000e-52 217
5 TraesCS2D01G359800 chr2A 87.293 181 12 4 5111 5285 16774763 16774938 4.180000e-46 196
6 TraesCS2D01G359800 chr2B 93.471 3492 198 12 996 4480 543710230 543706762 0.000000e+00 5158
7 TraesCS2D01G359800 chr2B 88.670 609 30 21 4685 5285 543706571 543705994 0.000000e+00 706
8 TraesCS2D01G359800 chr6D 94.444 684 26 7 1 682 71997262 71996589 0.000000e+00 1042
9 TraesCS2D01G359800 chr6D 98.225 169 3 0 1 169 145005801 145005969 4.000000e-76 296
10 TraesCS2D01G359800 chr6D 86.145 166 14 3 5126 5285 382038743 382038581 2.530000e-38 171
11 TraesCS2D01G359800 chr6D 94.667 75 4 0 678 752 71987935 71987861 3.340000e-22 117
12 TraesCS2D01G359800 chr1B 87.766 752 54 18 2 751 676268915 676268200 0.000000e+00 845
13 TraesCS2D01G359800 chr7D 96.774 403 12 1 1 402 593203401 593202999 0.000000e+00 671
14 TraesCS2D01G359800 chr7D 97.321 224 6 0 398 621 593194408 593194185 1.070000e-101 381
15 TraesCS2D01G359800 chr7D 93.939 99 4 2 652 748 593194188 593194090 1.190000e-31 148
16 TraesCS2D01G359800 chr1A 83.827 742 69 27 1 740 332415435 332416127 0.000000e+00 658
17 TraesCS2D01G359800 chr5B 81.027 448 50 22 326 749 54121204 54120768 1.840000e-84 324
18 TraesCS2D01G359800 chr5B 79.657 408 58 20 323 718 608657074 608657468 2.430000e-68 270
19 TraesCS2D01G359800 chr5B 86.188 181 14 4 5111 5285 26024667 26024492 9.040000e-43 185
20 TraesCS2D01G359800 chr5B 75.733 375 46 30 283 630 452814246 452813890 4.270000e-31 147
21 TraesCS2D01G359800 chr4A 77.928 444 63 20 322 741 123072491 123072923 1.470000e-60 244
22 TraesCS2D01G359800 chr3D 77.744 328 45 13 323 627 37292114 37292436 5.440000e-40 176
23 TraesCS2D01G359800 chr3D 89.623 106 8 3 644 748 37292420 37292523 1.190000e-26 132
24 TraesCS2D01G359800 chr7B 74.344 343 53 21 283 604 735922640 735922312 4.330000e-21 113


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G359800 chr2D 461545170 461550454 5284 True 9760 9760 100.0000 1 5285 1 chr2D.!!$R2 5284
1 TraesCS2D01G359800 chr2D 293780538 293781294 756 True 1177 1177 94.6410 1 764 1 chr2D.!!$R1 763
2 TraesCS2D01G359800 chr2A 606675647 606679845 4198 True 2975 5166 92.4805 996 5285 2 chr2A.!!$R1 4289
3 TraesCS2D01G359800 chr2B 543705994 543710230 4236 True 2932 5158 91.0705 996 5285 2 chr2B.!!$R1 4289
4 TraesCS2D01G359800 chr6D 71996589 71997262 673 True 1042 1042 94.4440 1 682 1 chr6D.!!$R2 681
5 TraesCS2D01G359800 chr1B 676268200 676268915 715 True 845 845 87.7660 2 751 1 chr1B.!!$R1 749
6 TraesCS2D01G359800 chr1A 332415435 332416127 692 False 658 658 83.8270 1 740 1 chr1A.!!$F1 739

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
858 865 0.103390 CGGGGCGTTGGTTTTTCTTT 59.897 50.000 0.00 0.0 0.00 2.52 F
913 920 1.427368 TGGTTAAGCCACACCCAATCT 59.573 47.619 1.51 0.0 43.61 2.40 F
1998 2008 0.837272 CGGAGGAGGCTTATTGGGAA 59.163 55.000 0.00 0.0 0.00 3.97 F
2616 2626 0.370273 GATACACAAAGCTGCGGTCG 59.630 55.000 0.00 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1791 1801 0.178861 ACCTCCTGGACCTGACCAAT 60.179 55.0 0.00 0.0 39.59 3.16 R
2205 2215 0.249114 GTCGAAGAGCCGGGAGAATC 60.249 60.0 2.18 0.0 36.95 2.52 R
3965 3975 0.250513 AAGGGTCTTAAGAGCAGGCG 59.749 55.0 30.11 0.0 43.82 5.52 R
4321 4331 0.040067 GTAAGCTGCAGGCAACACAC 60.040 55.0 17.12 0.0 44.79 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
354 358 3.077907 CAACATCCCCCGACCACT 58.922 61.111 0.00 0.00 0.00 4.00
708 715 4.426313 GGCTAGGGTTGGCGCCTT 62.426 66.667 29.70 10.42 39.42 4.35
764 771 1.004862 GAAAGGGGAAAGGGGACTCTG 59.995 57.143 0.00 0.00 42.68 3.35
765 772 0.103876 AAGGGGAAAGGGGACTCTGT 60.104 55.000 0.00 0.00 42.68 3.41
766 773 0.797579 AGGGGAAAGGGGACTCTGTA 59.202 55.000 0.00 0.00 42.68 2.74
767 774 1.369983 AGGGGAAAGGGGACTCTGTAT 59.630 52.381 0.00 0.00 42.68 2.29
768 775 2.206223 GGGGAAAGGGGACTCTGTATT 58.794 52.381 0.00 0.00 42.68 1.89
769 776 2.172930 GGGGAAAGGGGACTCTGTATTC 59.827 54.545 0.00 0.00 42.68 1.75
770 777 3.116174 GGGAAAGGGGACTCTGTATTCT 58.884 50.000 0.00 0.00 42.68 2.40
771 778 3.134985 GGGAAAGGGGACTCTGTATTCTC 59.865 52.174 0.00 0.00 42.68 2.87
772 779 3.134985 GGAAAGGGGACTCTGTATTCTCC 59.865 52.174 0.00 0.00 42.68 3.71
773 780 2.480642 AGGGGACTCTGTATTCTCCC 57.519 55.000 0.00 0.00 41.72 4.30
775 782 2.480642 GGGACTCTGTATTCTCCCCT 57.519 55.000 0.00 0.00 37.02 4.79
776 783 2.043227 GGGACTCTGTATTCTCCCCTG 58.957 57.143 0.00 0.00 37.02 4.45
777 784 2.627217 GGGACTCTGTATTCTCCCCTGT 60.627 54.545 0.00 0.00 37.02 4.00
778 785 2.696187 GGACTCTGTATTCTCCCCTGTC 59.304 54.545 0.00 0.00 0.00 3.51
779 786 2.359531 GACTCTGTATTCTCCCCTGTCG 59.640 54.545 0.00 0.00 0.00 4.35
780 787 2.025226 ACTCTGTATTCTCCCCTGTCGA 60.025 50.000 0.00 0.00 0.00 4.20
781 788 3.226777 CTCTGTATTCTCCCCTGTCGAT 58.773 50.000 0.00 0.00 0.00 3.59
782 789 3.223435 TCTGTATTCTCCCCTGTCGATC 58.777 50.000 0.00 0.00 0.00 3.69
783 790 3.117474 TCTGTATTCTCCCCTGTCGATCT 60.117 47.826 0.00 0.00 0.00 2.75
784 791 3.639094 CTGTATTCTCCCCTGTCGATCTT 59.361 47.826 0.00 0.00 0.00 2.40
785 792 4.800023 TGTATTCTCCCCTGTCGATCTTA 58.200 43.478 0.00 0.00 0.00 2.10
786 793 5.394738 TGTATTCTCCCCTGTCGATCTTAT 58.605 41.667 0.00 0.00 0.00 1.73
787 794 5.477291 TGTATTCTCCCCTGTCGATCTTATC 59.523 44.000 0.00 0.00 0.00 1.75
788 795 3.595190 TCTCCCCTGTCGATCTTATCA 57.405 47.619 0.00 0.00 0.00 2.15
789 796 3.910989 TCTCCCCTGTCGATCTTATCAA 58.089 45.455 0.00 0.00 0.00 2.57
790 797 3.891977 TCTCCCCTGTCGATCTTATCAAG 59.108 47.826 0.00 0.00 0.00 3.02
791 798 2.965831 TCCCCTGTCGATCTTATCAAGG 59.034 50.000 0.00 0.00 0.00 3.61
792 799 2.548920 CCCCTGTCGATCTTATCAAGGC 60.549 54.545 0.00 0.00 0.00 4.35
793 800 2.398498 CCTGTCGATCTTATCAAGGCG 58.602 52.381 0.00 0.00 0.00 5.52
794 801 2.223829 CCTGTCGATCTTATCAAGGCGT 60.224 50.000 0.00 0.00 0.00 5.68
795 802 2.791560 CTGTCGATCTTATCAAGGCGTG 59.208 50.000 0.00 0.00 0.00 5.34
796 803 2.165641 TGTCGATCTTATCAAGGCGTGT 59.834 45.455 0.00 0.00 0.00 4.49
797 804 3.379057 TGTCGATCTTATCAAGGCGTGTA 59.621 43.478 0.00 0.00 0.00 2.90
798 805 4.037565 TGTCGATCTTATCAAGGCGTGTAT 59.962 41.667 0.00 0.00 0.00 2.29
799 806 4.982916 GTCGATCTTATCAAGGCGTGTATT 59.017 41.667 0.00 0.00 0.00 1.89
800 807 5.462398 GTCGATCTTATCAAGGCGTGTATTT 59.538 40.000 0.00 0.00 0.00 1.40
801 808 6.018994 GTCGATCTTATCAAGGCGTGTATTTT 60.019 38.462 0.00 0.00 0.00 1.82
802 809 7.168637 GTCGATCTTATCAAGGCGTGTATTTTA 59.831 37.037 0.00 0.00 0.00 1.52
803 810 7.707464 TCGATCTTATCAAGGCGTGTATTTTAA 59.293 33.333 0.00 0.00 0.00 1.52
804 811 8.332464 CGATCTTATCAAGGCGTGTATTTTAAA 58.668 33.333 0.00 0.00 0.00 1.52
805 812 9.434559 GATCTTATCAAGGCGTGTATTTTAAAC 57.565 33.333 0.00 0.00 0.00 2.01
806 813 7.754625 TCTTATCAAGGCGTGTATTTTAAACC 58.245 34.615 0.00 0.00 0.00 3.27
807 814 5.968528 ATCAAGGCGTGTATTTTAAACCA 57.031 34.783 0.00 0.00 0.00 3.67
808 815 5.365403 TCAAGGCGTGTATTTTAAACCAG 57.635 39.130 0.00 0.00 0.00 4.00
809 816 3.842732 AGGCGTGTATTTTAAACCAGC 57.157 42.857 0.00 0.00 0.00 4.85
810 817 2.490509 AGGCGTGTATTTTAAACCAGCC 59.509 45.455 7.71 7.71 38.14 4.85
811 818 2.229302 GGCGTGTATTTTAAACCAGCCA 59.771 45.455 9.84 0.00 37.92 4.75
812 819 3.239254 GCGTGTATTTTAAACCAGCCAC 58.761 45.455 0.00 0.00 0.00 5.01
813 820 3.304794 GCGTGTATTTTAAACCAGCCACA 60.305 43.478 0.00 0.00 0.00 4.17
814 821 4.617298 GCGTGTATTTTAAACCAGCCACAT 60.617 41.667 0.00 0.00 0.00 3.21
815 822 5.392165 GCGTGTATTTTAAACCAGCCACATA 60.392 40.000 0.00 0.00 0.00 2.29
816 823 6.025280 CGTGTATTTTAAACCAGCCACATAC 58.975 40.000 0.00 0.00 0.00 2.39
817 824 6.025280 GTGTATTTTAAACCAGCCACATACG 58.975 40.000 0.00 0.00 0.00 3.06
818 825 4.712122 ATTTTAAACCAGCCACATACGG 57.288 40.909 0.00 0.00 0.00 4.02
819 826 3.420300 TTTAAACCAGCCACATACGGA 57.580 42.857 0.00 0.00 0.00 4.69
820 827 2.684001 TAAACCAGCCACATACGGAG 57.316 50.000 0.00 0.00 0.00 4.63
821 828 0.676782 AAACCAGCCACATACGGAGC 60.677 55.000 0.00 0.00 0.00 4.70
822 829 2.586079 CCAGCCACATACGGAGCG 60.586 66.667 0.00 0.00 0.00 5.03
823 830 2.586079 CAGCCACATACGGAGCGG 60.586 66.667 0.00 0.00 0.00 5.52
824 831 2.758327 AGCCACATACGGAGCGGA 60.758 61.111 0.00 0.00 0.00 5.54
825 832 2.185867 GCCACATACGGAGCGGAA 59.814 61.111 0.00 0.00 0.00 4.30
826 833 1.448893 GCCACATACGGAGCGGAAA 60.449 57.895 0.00 0.00 0.00 3.13
827 834 1.702491 GCCACATACGGAGCGGAAAC 61.702 60.000 0.00 0.00 0.00 2.78
841 848 0.657840 GGAAACGATCATCCAAGCGG 59.342 55.000 0.00 0.00 35.71 5.52
842 849 0.657840 GAAACGATCATCCAAGCGGG 59.342 55.000 0.00 0.00 38.37 6.13
843 850 0.748005 AAACGATCATCCAAGCGGGG 60.748 55.000 0.00 0.00 37.22 5.73
844 851 2.974698 CGATCATCCAAGCGGGGC 60.975 66.667 0.00 0.00 37.22 5.80
845 852 2.974698 GATCATCCAAGCGGGGCG 60.975 66.667 0.00 0.00 37.22 6.13
846 853 3.757248 GATCATCCAAGCGGGGCGT 62.757 63.158 0.00 0.00 37.22 5.68
847 854 3.344137 ATCATCCAAGCGGGGCGTT 62.344 57.895 0.00 0.00 37.22 4.84
848 855 3.814268 CATCCAAGCGGGGCGTTG 61.814 66.667 0.00 0.00 37.22 4.10
852 859 3.601685 CAAGCGGGGCGTTGGTTT 61.602 61.111 0.00 0.00 0.00 3.27
853 860 2.835895 AAGCGGGGCGTTGGTTTT 60.836 55.556 0.00 0.00 0.00 2.43
854 861 2.428085 AAGCGGGGCGTTGGTTTTT 61.428 52.632 0.00 0.00 0.00 1.94
855 862 2.355363 GCGGGGCGTTGGTTTTTC 60.355 61.111 0.00 0.00 0.00 2.29
856 863 2.852180 GCGGGGCGTTGGTTTTTCT 61.852 57.895 0.00 0.00 0.00 2.52
857 864 1.737201 CGGGGCGTTGGTTTTTCTT 59.263 52.632 0.00 0.00 0.00 2.52
858 865 0.103390 CGGGGCGTTGGTTTTTCTTT 59.897 50.000 0.00 0.00 0.00 2.52
859 866 1.471851 CGGGGCGTTGGTTTTTCTTTT 60.472 47.619 0.00 0.00 0.00 2.27
860 867 2.634600 GGGGCGTTGGTTTTTCTTTTT 58.365 42.857 0.00 0.00 0.00 1.94
861 868 2.610374 GGGGCGTTGGTTTTTCTTTTTC 59.390 45.455 0.00 0.00 0.00 2.29
862 869 2.283086 GGGCGTTGGTTTTTCTTTTTCG 59.717 45.455 0.00 0.00 0.00 3.46
863 870 2.924926 GGCGTTGGTTTTTCTTTTTCGT 59.075 40.909 0.00 0.00 0.00 3.85
864 871 3.368539 GGCGTTGGTTTTTCTTTTTCGTT 59.631 39.130 0.00 0.00 0.00 3.85
865 872 4.562000 GGCGTTGGTTTTTCTTTTTCGTTA 59.438 37.500 0.00 0.00 0.00 3.18
866 873 5.232626 GGCGTTGGTTTTTCTTTTTCGTTAT 59.767 36.000 0.00 0.00 0.00 1.89
867 874 6.117542 GCGTTGGTTTTTCTTTTTCGTTATG 58.882 36.000 0.00 0.00 0.00 1.90
868 875 6.237622 GCGTTGGTTTTTCTTTTTCGTTATGT 60.238 34.615 0.00 0.00 0.00 2.29
869 876 7.324449 CGTTGGTTTTTCTTTTTCGTTATGTC 58.676 34.615 0.00 0.00 0.00 3.06
870 877 7.219344 CGTTGGTTTTTCTTTTTCGTTATGTCT 59.781 33.333 0.00 0.00 0.00 3.41
871 878 8.865978 GTTGGTTTTTCTTTTTCGTTATGTCTT 58.134 29.630 0.00 0.00 0.00 3.01
872 879 8.401046 TGGTTTTTCTTTTTCGTTATGTCTTG 57.599 30.769 0.00 0.00 0.00 3.02
873 880 8.244802 TGGTTTTTCTTTTTCGTTATGTCTTGA 58.755 29.630 0.00 0.00 0.00 3.02
874 881 8.529102 GGTTTTTCTTTTTCGTTATGTCTTGAC 58.471 33.333 0.00 0.00 0.00 3.18
875 882 9.285770 GTTTTTCTTTTTCGTTATGTCTTGACT 57.714 29.630 2.35 0.00 0.00 3.41
876 883 9.849166 TTTTTCTTTTTCGTTATGTCTTGACTT 57.151 25.926 2.35 0.00 0.00 3.01
877 884 8.835467 TTTCTTTTTCGTTATGTCTTGACTTG 57.165 30.769 2.35 0.00 0.00 3.16
878 885 7.548196 TCTTTTTCGTTATGTCTTGACTTGT 57.452 32.000 2.35 0.00 0.00 3.16
879 886 8.651391 TCTTTTTCGTTATGTCTTGACTTGTA 57.349 30.769 2.35 0.00 0.00 2.41
880 887 8.545420 TCTTTTTCGTTATGTCTTGACTTGTAC 58.455 33.333 2.35 0.00 0.00 2.90
881 888 8.428186 TTTTTCGTTATGTCTTGACTTGTACT 57.572 30.769 2.35 0.00 0.00 2.73
882 889 7.633361 TTTCGTTATGTCTTGACTTGTACTC 57.367 36.000 2.35 0.00 0.00 2.59
883 890 5.388111 TCGTTATGTCTTGACTTGTACTCG 58.612 41.667 2.35 0.00 0.00 4.18
884 891 5.049198 TCGTTATGTCTTGACTTGTACTCGT 60.049 40.000 2.35 0.00 0.00 4.18
885 892 6.147656 TCGTTATGTCTTGACTTGTACTCGTA 59.852 38.462 2.35 0.00 0.00 3.43
886 893 6.465149 CGTTATGTCTTGACTTGTACTCGTAG 59.535 42.308 2.35 0.00 0.00 3.51
887 894 7.524912 GTTATGTCTTGACTTGTACTCGTAGA 58.475 38.462 2.35 0.00 0.00 2.59
902 909 4.708726 TCGTAGAGTACTTGGTTAAGCC 57.291 45.455 0.00 0.00 37.43 4.35
912 919 1.917872 TGGTTAAGCCACACCCAATC 58.082 50.000 1.51 0.00 43.61 2.67
913 920 1.427368 TGGTTAAGCCACACCCAATCT 59.573 47.619 1.51 0.00 43.61 2.40
914 921 2.092323 GGTTAAGCCACACCCAATCTC 58.908 52.381 0.00 0.00 37.17 2.75
915 922 2.554344 GGTTAAGCCACACCCAATCTCA 60.554 50.000 0.00 0.00 37.17 3.27
916 923 3.356290 GTTAAGCCACACCCAATCTCAT 58.644 45.455 0.00 0.00 0.00 2.90
917 924 2.610438 AAGCCACACCCAATCTCATT 57.390 45.000 0.00 0.00 0.00 2.57
918 925 2.610438 AGCCACACCCAATCTCATTT 57.390 45.000 0.00 0.00 0.00 2.32
919 926 2.893424 AGCCACACCCAATCTCATTTT 58.107 42.857 0.00 0.00 0.00 1.82
920 927 2.564062 AGCCACACCCAATCTCATTTTG 59.436 45.455 0.00 0.00 0.00 2.44
921 928 2.354003 GCCACACCCAATCTCATTTTGG 60.354 50.000 0.00 0.00 42.73 3.28
922 929 2.899256 CCACACCCAATCTCATTTTGGT 59.101 45.455 2.12 0.00 41.74 3.67
923 930 3.324556 CCACACCCAATCTCATTTTGGTT 59.675 43.478 2.12 0.00 41.74 3.67
924 931 4.202346 CCACACCCAATCTCATTTTGGTTT 60.202 41.667 2.12 0.00 41.74 3.27
925 932 5.011533 CCACACCCAATCTCATTTTGGTTTA 59.988 40.000 2.12 0.00 41.74 2.01
926 933 6.158598 CACACCCAATCTCATTTTGGTTTAG 58.841 40.000 2.12 0.00 41.74 1.85
927 934 5.838521 ACACCCAATCTCATTTTGGTTTAGT 59.161 36.000 2.12 0.00 41.74 2.24
928 935 6.158598 CACCCAATCTCATTTTGGTTTAGTG 58.841 40.000 2.12 0.00 41.74 2.74
929 936 6.015519 CACCCAATCTCATTTTGGTTTAGTGA 60.016 38.462 2.12 0.00 41.74 3.41
930 937 6.015434 ACCCAATCTCATTTTGGTTTAGTGAC 60.015 38.462 2.12 0.00 41.74 3.67
931 938 6.209391 CCCAATCTCATTTTGGTTTAGTGACT 59.791 38.462 0.00 0.00 41.74 3.41
932 939 7.393234 CCCAATCTCATTTTGGTTTAGTGACTA 59.607 37.037 2.12 0.00 41.74 2.59
933 940 8.792633 CCAATCTCATTTTGGTTTAGTGACTAA 58.207 33.333 0.00 0.00 39.05 2.24
934 941 9.612620 CAATCTCATTTTGGTTTAGTGACTAAC 57.387 33.333 4.23 0.95 0.00 2.34
935 942 9.574516 AATCTCATTTTGGTTTAGTGACTAACT 57.425 29.630 4.23 0.00 43.40 2.24
937 944 9.485206 TCTCATTTTGGTTTAGTGACTAACTAC 57.515 33.333 4.23 1.66 41.21 2.73
938 945 8.611654 TCATTTTGGTTTAGTGACTAACTACC 57.388 34.615 15.90 15.90 41.21 3.18
939 946 8.434392 TCATTTTGGTTTAGTGACTAACTACCT 58.566 33.333 20.81 4.56 41.21 3.08
940 947 9.063615 CATTTTGGTTTAGTGACTAACTACCTT 57.936 33.333 20.81 6.70 41.21 3.50
941 948 8.441312 TTTTGGTTTAGTGACTAACTACCTTG 57.559 34.615 20.81 0.00 41.21 3.61
942 949 6.736110 TGGTTTAGTGACTAACTACCTTGT 57.264 37.500 20.81 0.00 41.21 3.16
943 950 6.752168 TGGTTTAGTGACTAACTACCTTGTC 58.248 40.000 20.81 2.28 41.21 3.18
944 951 6.552350 TGGTTTAGTGACTAACTACCTTGTCT 59.448 38.462 20.81 0.00 41.21 3.41
945 952 7.725397 TGGTTTAGTGACTAACTACCTTGTCTA 59.275 37.037 20.81 3.72 41.21 2.59
946 953 8.242739 GGTTTAGTGACTAACTACCTTGTCTAG 58.757 40.741 15.61 0.00 41.21 2.43
947 954 9.007901 GTTTAGTGACTAACTACCTTGTCTAGA 57.992 37.037 4.23 0.00 41.21 2.43
948 955 9.578576 TTTAGTGACTAACTACCTTGTCTAGAA 57.421 33.333 4.23 0.00 41.21 2.10
949 956 9.578576 TTAGTGACTAACTACCTTGTCTAGAAA 57.421 33.333 0.00 0.00 41.21 2.52
950 957 8.474710 AGTGACTAACTACCTTGTCTAGAAAA 57.525 34.615 0.00 0.00 37.36 2.29
951 958 8.921205 AGTGACTAACTACCTTGTCTAGAAAAA 58.079 33.333 0.00 0.00 37.36 1.94
972 979 4.890158 AAAATCTTCACCCATTTCCACC 57.110 40.909 0.00 0.00 0.00 4.61
973 980 3.833559 AATCTTCACCCATTTCCACCT 57.166 42.857 0.00 0.00 0.00 4.00
974 981 2.879103 TCTTCACCCATTTCCACCTC 57.121 50.000 0.00 0.00 0.00 3.85
975 982 2.348472 TCTTCACCCATTTCCACCTCT 58.652 47.619 0.00 0.00 0.00 3.69
976 983 2.716424 TCTTCACCCATTTCCACCTCTT 59.284 45.455 0.00 0.00 0.00 2.85
977 984 3.140144 TCTTCACCCATTTCCACCTCTTT 59.860 43.478 0.00 0.00 0.00 2.52
978 985 3.611025 TCACCCATTTCCACCTCTTTT 57.389 42.857 0.00 0.00 0.00 2.27
979 986 3.922375 TCACCCATTTCCACCTCTTTTT 58.078 40.909 0.00 0.00 0.00 1.94
980 987 5.068215 TCACCCATTTCCACCTCTTTTTA 57.932 39.130 0.00 0.00 0.00 1.52
981 988 4.830600 TCACCCATTTCCACCTCTTTTTAC 59.169 41.667 0.00 0.00 0.00 2.01
982 989 4.021456 CACCCATTTCCACCTCTTTTTACC 60.021 45.833 0.00 0.00 0.00 2.85
983 990 4.140782 ACCCATTTCCACCTCTTTTTACCT 60.141 41.667 0.00 0.00 0.00 3.08
984 991 4.462834 CCCATTTCCACCTCTTTTTACCTC 59.537 45.833 0.00 0.00 0.00 3.85
985 992 4.156008 CCATTTCCACCTCTTTTTACCTCG 59.844 45.833 0.00 0.00 0.00 4.63
986 993 3.412237 TTCCACCTCTTTTTACCTCGG 57.588 47.619 0.00 0.00 0.00 4.63
987 994 2.332117 TCCACCTCTTTTTACCTCGGT 58.668 47.619 0.00 0.00 0.00 4.69
988 995 2.301009 TCCACCTCTTTTTACCTCGGTC 59.699 50.000 0.00 0.00 0.00 4.79
989 996 2.614734 CCACCTCTTTTTACCTCGGTCC 60.615 54.545 0.00 0.00 0.00 4.46
990 997 2.038033 CACCTCTTTTTACCTCGGTCCA 59.962 50.000 0.00 0.00 0.00 4.02
991 998 2.910977 ACCTCTTTTTACCTCGGTCCAT 59.089 45.455 0.00 0.00 0.00 3.41
992 999 3.055312 ACCTCTTTTTACCTCGGTCCATC 60.055 47.826 0.00 0.00 0.00 3.51
993 1000 3.197983 CCTCTTTTTACCTCGGTCCATCT 59.802 47.826 0.00 0.00 0.00 2.90
994 1001 4.404715 CCTCTTTTTACCTCGGTCCATCTA 59.595 45.833 0.00 0.00 0.00 1.98
1173 1180 4.632458 GTCGCCGATCTCCTCGCC 62.632 72.222 0.00 0.00 46.25 5.54
1791 1801 1.699634 CTTCAGGTGGTTCTCAGGGAA 59.300 52.381 0.00 0.00 0.00 3.97
1805 1815 0.995024 AGGGAATTGGTCAGGTCCAG 59.005 55.000 0.00 0.00 38.80 3.86
1849 1859 1.004440 GCCTGGTGTGAGGACAGTC 60.004 63.158 0.00 0.00 34.69 3.51
1962 1972 2.383527 CGGAGCGGCTGAACTGTTC 61.384 63.158 7.50 13.49 34.28 3.18
1998 2008 0.837272 CGGAGGAGGCTTATTGGGAA 59.163 55.000 0.00 0.00 0.00 3.97
2175 2185 1.561076 AGCATAGTCATGGCAAGTGGA 59.439 47.619 0.00 0.00 32.36 4.02
2176 2186 1.672881 GCATAGTCATGGCAAGTGGAC 59.327 52.381 0.00 0.00 32.36 4.02
2178 2188 3.432186 GCATAGTCATGGCAAGTGGACTA 60.432 47.826 17.83 17.83 44.32 2.59
2190 2200 2.114616 AGTGGACTATGGGAGCTTGAG 58.885 52.381 0.00 0.00 0.00 3.02
2275 2285 1.890489 AGCAATGCTTCACATTCTGCA 59.110 42.857 0.00 0.00 46.28 4.41
2507 2517 5.522456 TGAATGTTTTTGTCTGACTGATGC 58.478 37.500 9.51 0.00 0.00 3.91
2559 2569 0.886043 GCCATCTGTCAGTGTGCACA 60.886 55.000 17.42 17.42 0.00 4.57
2563 2573 3.005050 CCATCTGTCAGTGTGCACAAAAT 59.995 43.478 23.59 7.96 0.00 1.82
2595 2605 4.214310 TGAGCAAGTTTCTTGAATTGGGA 58.786 39.130 12.77 0.00 0.00 4.37
2616 2626 0.370273 GATACACAAAGCTGCGGTCG 59.630 55.000 0.00 0.00 0.00 4.79
2626 2636 0.387239 GCTGCGGTCGCTTTTGATTT 60.387 50.000 16.36 0.00 42.51 2.17
2769 2779 7.444487 GGCAATCTAAAACTTCTCCGGTATATT 59.556 37.037 0.00 0.00 0.00 1.28
2844 2854 5.450376 GCAATCTGCAAATTCTGAATGTG 57.550 39.130 14.88 14.88 44.26 3.21
2845 2855 4.927425 GCAATCTGCAAATTCTGAATGTGT 59.073 37.500 19.06 0.00 44.26 3.72
2864 2874 2.035961 TGTTGAACGTCCCTCTGAAGAG 59.964 50.000 0.00 0.00 41.71 2.85
2874 2884 1.134159 CCTCTGAAGAGCCATCCCAAG 60.134 57.143 1.54 0.00 40.75 3.61
2891 2901 3.471680 CCAAGGGCTTGACTAGATTAGC 58.528 50.000 0.00 1.38 42.93 3.09
2912 2922 4.702131 AGCCAATCTGAGGAAATGTTACAC 59.298 41.667 0.00 0.00 0.00 2.90
2926 2936 5.873179 ATGTTACACGAATGAACCGATTT 57.127 34.783 0.00 0.00 0.00 2.17
2930 2940 6.017770 TGTTACACGAATGAACCGATTTCTTT 60.018 34.615 0.00 0.00 34.96 2.52
2940 2950 4.286297 ACCGATTTCTTTGGTGATGAGA 57.714 40.909 0.00 0.00 40.94 3.27
2973 2983 4.855715 TTTGACATCACTCGAGAACTCT 57.144 40.909 21.68 0.00 0.00 3.24
2976 2986 5.959618 TGACATCACTCGAGAACTCTTTA 57.040 39.130 21.68 0.00 0.00 1.85
2992 3002 8.947115 AGAACTCTTTAGTATTTGAAATTCCGG 58.053 33.333 0.00 0.00 33.75 5.14
3059 3069 7.897575 AGCTGACTGAAACTTTACATCTTAG 57.102 36.000 0.00 0.00 0.00 2.18
3117 3127 1.602668 GCCAAGATGAACGCAAAAGCA 60.603 47.619 0.00 0.00 0.00 3.91
3138 3148 3.813166 CACACCTACAACGGTTGATTCTT 59.187 43.478 26.39 7.00 34.29 2.52
3174 3184 7.505585 TCAAGTGAAGTTGGTAATCCAGAATTT 59.494 33.333 0.00 0.00 45.22 1.82
3178 3188 6.093495 TGAAGTTGGTAATCCAGAATTTAGCG 59.907 38.462 0.00 0.00 45.22 4.26
3183 3193 4.757149 GGTAATCCAGAATTTAGCGATGCT 59.243 41.667 0.00 0.00 43.41 3.79
3217 3227 8.857216 CAGAAGAAAGCATTATTGTTGAATCAC 58.143 33.333 0.00 0.00 0.00 3.06
3225 3235 6.626623 GCATTATTGTTGAATCACTTGAGCCT 60.627 38.462 0.00 0.00 0.00 4.58
3243 3253 1.407989 CCTCATCCCAACCTTGAGAGC 60.408 57.143 0.90 0.00 39.36 4.09
3299 3309 0.823356 TCTTGGTTGCAGGCTGGAAC 60.823 55.000 35.17 35.17 46.14 3.62
3441 3451 1.889829 GAGTGTCTACAGGCACAGAGT 59.110 52.381 15.80 0.00 38.02 3.24
3512 3522 2.108075 TGCTCCCTGTGGAAAGATTTCA 59.892 45.455 7.56 0.00 41.17 2.69
3659 3669 0.809385 CTTCCATCCTGCTTGCACAG 59.191 55.000 0.00 0.00 37.42 3.66
3732 3742 4.042809 TCCCTTCCAGCAGAAATAGTTTCA 59.957 41.667 5.36 0.00 42.10 2.69
3736 3746 5.227569 TCCAGCAGAAATAGTTTCACAGA 57.772 39.130 5.36 0.00 42.10 3.41
3810 3820 3.837893 TGGATTGCACCACCTTTCA 57.162 47.368 0.00 0.00 34.77 2.69
3840 3850 2.057137 ACCTGCACATTGTGAACTGT 57.943 45.000 20.77 5.27 35.23 3.55
3885 3895 3.396491 GATGTTTCTCGACGTCGGT 57.604 52.632 35.05 14.03 40.29 4.69
3903 3913 4.986708 GAAGGCCGGGGGTTGCAA 62.987 66.667 2.18 0.00 0.00 4.08
3961 3971 2.808523 TAGCCTGATGATGAGAAGCG 57.191 50.000 0.00 0.00 0.00 4.68
3964 3974 1.218763 CCTGATGATGAGAAGCGCAG 58.781 55.000 11.47 0.00 0.00 5.18
3982 3992 1.815840 GCGCCTGCTCTTAAGACCC 60.816 63.158 0.00 0.00 38.39 4.46
3987 3997 2.236395 GCCTGCTCTTAAGACCCTTGTA 59.764 50.000 0.00 0.00 0.00 2.41
4002 4012 3.432378 CCTTGTACTCTACCAGTCCACT 58.568 50.000 0.00 0.00 36.43 4.00
4092 4102 2.341846 TGTTTCAGGACTGTGGGAAC 57.658 50.000 0.00 2.52 0.00 3.62
4113 4123 2.553904 CCTTGTTGCACTCCCTGAAGAT 60.554 50.000 0.00 0.00 0.00 2.40
4114 4124 2.957402 TGTTGCACTCCCTGAAGATT 57.043 45.000 0.00 0.00 0.00 2.40
4118 4128 4.072131 GTTGCACTCCCTGAAGATTTGTA 58.928 43.478 0.00 0.00 0.00 2.41
4128 4138 5.048713 CCCTGAAGATTTGTACACTTTGTCC 60.049 44.000 0.00 0.00 0.00 4.02
4141 4151 2.771943 ACTTTGTCCACTCTCCAGTTCA 59.228 45.455 0.00 0.00 0.00 3.18
4146 4156 0.036952 CCACTCTCCAGTTCATGCGT 60.037 55.000 0.00 0.00 0.00 5.24
4194 4204 4.690719 CCACGTACGGGCTTGCCA 62.691 66.667 21.06 0.00 0.00 4.92
4210 4220 1.893919 GCCAGTCTCCCTGAGGACAC 61.894 65.000 0.00 0.00 44.49 3.67
4215 4225 0.609406 TCTCCCTGAGGACACTGTCG 60.609 60.000 0.00 0.00 37.19 4.35
4292 4302 1.100510 AATACGGCGTAGTCTCTGCA 58.899 50.000 25.01 0.22 0.00 4.41
4297 4307 0.798771 GGCGTAGTCTCTGCAACTCG 60.799 60.000 0.00 0.00 0.00 4.18
4299 4309 0.179161 CGTAGTCTCTGCAACTCGGG 60.179 60.000 0.00 0.00 0.00 5.14
4300 4310 0.173708 GTAGTCTCTGCAACTCGGGG 59.826 60.000 0.00 0.00 0.00 5.73
4301 4311 0.039180 TAGTCTCTGCAACTCGGGGA 59.961 55.000 0.00 0.00 0.00 4.81
4304 4314 0.614697 TCTCTGCAACTCGGGGATCA 60.615 55.000 0.00 0.00 0.00 2.92
4305 4315 0.179089 CTCTGCAACTCGGGGATCAG 60.179 60.000 0.00 0.00 0.00 2.90
4318 4328 1.203928 GGATCAGAGTGCGAACATCG 58.796 55.000 0.00 0.00 43.89 3.84
4321 4331 2.507102 AGAGTGCGAACATCGGCG 60.507 61.111 0.00 0.00 40.84 6.46
4381 4391 7.766278 AGCTTTGAGACATTGTAACCATACTAG 59.234 37.037 0.00 0.00 32.98 2.57
4382 4392 7.549488 GCTTTGAGACATTGTAACCATACTAGT 59.451 37.037 0.00 0.00 32.98 2.57
4407 4417 9.886132 GTATTTCTATAGGAGTGTCCTTTTCAA 57.114 33.333 0.00 0.00 46.91 2.69
4414 4424 6.983906 AGGAGTGTCCTTTTCAATTTCATT 57.016 33.333 0.00 0.00 46.91 2.57
4419 4429 6.986231 AGTGTCCTTTTCAATTTCATTTGGAC 59.014 34.615 0.00 0.00 41.06 4.02
4420 4430 6.760770 GTGTCCTTTTCAATTTCATTTGGACA 59.239 34.615 0.00 0.00 45.91 4.02
4421 4431 7.334090 TGTCCTTTTCAATTTCATTTGGACAA 58.666 30.769 8.34 0.00 45.37 3.18
4453 4467 5.332707 GTCTCGGGAACTCAAATAAAATGC 58.667 41.667 0.00 0.00 0.00 3.56
4460 4474 6.099341 GGAACTCAAATAAAATGCGTGGAAT 58.901 36.000 0.00 0.00 0.00 3.01
4463 4477 7.350110 ACTCAAATAAAATGCGTGGAATTTG 57.650 32.000 11.25 11.25 36.25 2.32
4478 4492 3.491447 GGAATTTGTTCAGCTTGTGTGCT 60.491 43.478 0.00 0.00 45.18 4.40
4479 4493 4.261572 GGAATTTGTTCAGCTTGTGTGCTA 60.262 41.667 0.00 0.00 41.98 3.49
4480 4494 3.969117 TTTGTTCAGCTTGTGTGCTAG 57.031 42.857 0.00 0.00 41.98 3.42
4483 4497 3.653344 TGTTCAGCTTGTGTGCTAGTAG 58.347 45.455 0.00 0.00 41.98 2.57
4498 4512 5.694006 GTGCTAGTAGAAATCTGCATACAGG 59.306 44.000 0.00 0.00 44.59 4.00
4521 4535 6.687604 GGTAACTGCATTAACTTCCATGTTT 58.312 36.000 0.00 0.00 0.00 2.83
4524 4538 6.403866 ACTGCATTAACTTCCATGTTTTGA 57.596 33.333 0.00 0.00 0.00 2.69
4527 4541 6.215121 TGCATTAACTTCCATGTTTTGACAG 58.785 36.000 0.00 0.00 0.00 3.51
4530 4544 7.651808 CATTAACTTCCATGTTTTGACAGAGT 58.348 34.615 0.00 0.00 0.00 3.24
4531 4545 5.505173 AACTTCCATGTTTTGACAGAGTG 57.495 39.130 0.00 0.00 0.00 3.51
4539 4553 5.749596 TGTTTTGACAGAGTGTAACCATG 57.250 39.130 0.00 0.00 37.80 3.66
4543 4557 5.482163 TTGACAGAGTGTAACCATGATCA 57.518 39.130 0.00 0.00 37.80 2.92
4573 4587 1.344114 GCCTTGTTCTTGCCAATTCCA 59.656 47.619 0.00 0.00 0.00 3.53
4574 4588 2.027837 GCCTTGTTCTTGCCAATTCCAT 60.028 45.455 0.00 0.00 0.00 3.41
4576 4590 4.322650 GCCTTGTTCTTGCCAATTCCATTA 60.323 41.667 0.00 0.00 0.00 1.90
4577 4591 5.413499 CCTTGTTCTTGCCAATTCCATTAG 58.587 41.667 0.00 0.00 0.00 1.73
4579 4593 4.671831 TGTTCTTGCCAATTCCATTAGGA 58.328 39.130 0.00 0.00 43.93 2.94
4580 4594 4.462483 TGTTCTTGCCAATTCCATTAGGAC 59.538 41.667 0.00 0.00 45.73 3.85
4582 4596 4.671831 TCTTGCCAATTCCATTAGGACAA 58.328 39.130 0.00 0.00 45.73 3.18
4583 4597 4.706476 TCTTGCCAATTCCATTAGGACAAG 59.294 41.667 0.00 0.00 45.73 3.16
4584 4598 2.760092 TGCCAATTCCATTAGGACAAGC 59.240 45.455 0.00 0.00 45.73 4.01
4585 4599 3.026694 GCCAATTCCATTAGGACAAGCT 58.973 45.455 0.00 0.00 45.73 3.74
4587 4601 4.081476 GCCAATTCCATTAGGACAAGCTTT 60.081 41.667 0.00 0.00 45.73 3.51
4588 4602 5.654497 CCAATTCCATTAGGACAAGCTTTC 58.346 41.667 0.00 0.00 45.73 2.62
4589 4603 5.420104 CCAATTCCATTAGGACAAGCTTTCT 59.580 40.000 0.00 0.00 45.73 2.52
4591 4605 7.286316 CCAATTCCATTAGGACAAGCTTTCTAT 59.714 37.037 0.00 0.00 45.73 1.98
4592 4606 8.348507 CAATTCCATTAGGACAAGCTTTCTATC 58.651 37.037 0.00 0.00 45.73 2.08
4593 4607 6.814954 TCCATTAGGACAAGCTTTCTATCT 57.185 37.500 0.00 0.00 39.61 1.98
4594 4608 6.586344 TCCATTAGGACAAGCTTTCTATCTG 58.414 40.000 0.00 1.39 39.61 2.90
4597 4611 4.751767 AGGACAAGCTTTCTATCTGAGG 57.248 45.455 0.00 0.00 0.00 3.86
4598 4612 4.357325 AGGACAAGCTTTCTATCTGAGGA 58.643 43.478 0.00 0.00 0.00 3.71
4599 4613 4.780021 AGGACAAGCTTTCTATCTGAGGAA 59.220 41.667 0.00 0.00 0.00 3.36
4600 4614 4.873259 GGACAAGCTTTCTATCTGAGGAAC 59.127 45.833 0.00 0.00 0.00 3.62
4618 4632 4.520492 AGGAACTCAAATAGCACCAAGTTG 59.480 41.667 0.00 0.00 0.00 3.16
4619 4633 4.278419 GGAACTCAAATAGCACCAAGTTGT 59.722 41.667 1.45 0.00 0.00 3.32
4635 4649 2.887152 AGTTGTTGGAATCTGTTCAGCC 59.113 45.455 0.00 0.00 36.01 4.85
4637 4651 2.507484 TGTTGGAATCTGTTCAGCCTG 58.493 47.619 0.00 0.00 36.01 4.85
4638 4652 2.158623 TGTTGGAATCTGTTCAGCCTGT 60.159 45.455 0.00 0.00 36.01 4.00
4640 4654 1.421268 TGGAATCTGTTCAGCCTGTGT 59.579 47.619 0.00 0.00 36.01 3.72
4641 4655 1.808945 GGAATCTGTTCAGCCTGTGTG 59.191 52.381 0.00 0.00 36.01 3.82
4643 4657 0.399454 ATCTGTTCAGCCTGTGTGCT 59.601 50.000 0.00 0.00 44.00 4.40
4644 4658 1.047801 TCTGTTCAGCCTGTGTGCTA 58.952 50.000 0.00 0.00 40.32 3.49
4645 4659 1.001293 TCTGTTCAGCCTGTGTGCTAG 59.999 52.381 0.00 0.00 40.32 3.42
4646 4660 0.035317 TGTTCAGCCTGTGTGCTAGG 59.965 55.000 0.00 0.00 40.32 3.02
4647 4661 0.321671 GTTCAGCCTGTGTGCTAGGA 59.678 55.000 0.00 0.00 40.32 2.94
4648 4662 0.321671 TTCAGCCTGTGTGCTAGGAC 59.678 55.000 7.56 7.56 40.32 3.85
4649 4663 0.542938 TCAGCCTGTGTGCTAGGACT 60.543 55.000 15.92 0.00 40.32 3.85
4650 4664 0.108424 CAGCCTGTGTGCTAGGACTC 60.108 60.000 15.92 12.46 40.32 3.36
4651 4665 1.153745 GCCTGTGTGCTAGGACTCG 60.154 63.158 15.92 8.28 37.52 4.18
4652 4666 1.878656 GCCTGTGTGCTAGGACTCGT 61.879 60.000 15.92 0.00 37.52 4.18
4653 4667 0.109086 CCTGTGTGCTAGGACTCGTG 60.109 60.000 15.92 8.70 37.52 4.35
4657 4688 0.881796 TGTGCTAGGACTCGTGACAG 59.118 55.000 15.92 0.00 0.00 3.51
4659 4690 0.881796 TGCTAGGACTCGTGACAGTG 59.118 55.000 0.00 0.00 0.00 3.66
4681 4712 3.434299 GGTTGACAGTGTAACCATAACCG 59.566 47.826 20.62 0.00 44.48 4.44
4682 4713 4.060205 GTTGACAGTGTAACCATAACCGT 58.940 43.478 0.00 0.00 37.80 4.83
4683 4714 3.655486 TGACAGTGTAACCATAACCGTG 58.345 45.455 0.00 0.00 37.80 4.94
4684 4715 2.414138 GACAGTGTAACCATAACCGTGC 59.586 50.000 0.00 0.00 37.80 5.34
4685 4716 2.038033 ACAGTGTAACCATAACCGTGCT 59.962 45.455 0.00 0.00 37.80 4.40
4686 4717 2.415168 CAGTGTAACCATAACCGTGCTG 59.585 50.000 0.00 0.00 37.80 4.41
4687 4718 1.129811 GTGTAACCATAACCGTGCTGC 59.870 52.381 0.00 0.00 0.00 5.25
4688 4719 1.270893 TGTAACCATAACCGTGCTGCA 60.271 47.619 0.00 0.00 0.00 4.41
4713 4745 2.092212 AGTCTTGCCAATACCATCTGGG 60.092 50.000 0.54 0.00 44.81 4.45
4714 4746 2.092429 GTCTTGCCAATACCATCTGGGA 60.092 50.000 0.54 0.00 41.15 4.37
4715 4747 2.092429 TCTTGCCAATACCATCTGGGAC 60.092 50.000 0.54 0.00 41.15 4.46
4716 4748 1.294041 TGCCAATACCATCTGGGACA 58.706 50.000 0.54 0.00 41.15 4.02
4719 4751 3.299503 GCCAATACCATCTGGGACATTT 58.700 45.455 0.54 0.00 41.15 2.32
4720 4752 3.319122 GCCAATACCATCTGGGACATTTC 59.681 47.826 0.54 0.00 41.15 2.17
4722 4754 5.203528 CCAATACCATCTGGGACATTTCTT 58.796 41.667 0.54 0.00 41.15 2.52
4723 4755 5.300286 CCAATACCATCTGGGACATTTCTTC 59.700 44.000 0.54 0.00 41.15 2.87
4724 4756 5.983333 ATACCATCTGGGACATTTCTTCT 57.017 39.130 0.54 0.00 41.15 2.85
4725 4757 3.960571 ACCATCTGGGACATTTCTTCTG 58.039 45.455 0.54 0.00 41.15 3.02
4726 4758 2.686915 CCATCTGGGACATTTCTTCTGC 59.313 50.000 0.00 0.00 40.01 4.26
4727 4759 2.496899 TCTGGGACATTTCTTCTGCC 57.503 50.000 0.00 0.00 38.20 4.85
4728 4760 1.988107 TCTGGGACATTTCTTCTGCCT 59.012 47.619 0.00 0.00 38.20 4.75
4797 4829 4.839668 TGGTACTGCCAAAATACACAAC 57.160 40.909 0.00 0.00 45.94 3.32
4798 4830 3.570550 TGGTACTGCCAAAATACACAACC 59.429 43.478 0.00 0.00 45.94 3.77
4799 4831 3.570550 GGTACTGCCAAAATACACAACCA 59.429 43.478 0.00 0.00 37.17 3.67
4844 4876 1.985473 ACAGAGCAACTTGGCATTCA 58.015 45.000 0.00 0.00 35.83 2.57
4874 4906 1.069090 AAACTCGAGCGAAGTGGCA 59.931 52.632 13.61 0.00 34.64 4.92
4926 4960 0.043334 CTCCTCTCCTTCCCTTCCCA 59.957 60.000 0.00 0.00 0.00 4.37
5027 5062 2.282251 AGCGACAGTCTCCGGTCA 60.282 61.111 0.00 0.00 35.77 4.02
5029 5064 2.878429 CGACAGTCTCCGGTCAGG 59.122 66.667 0.00 0.00 35.77 3.86
5030 5065 2.574399 GACAGTCTCCGGTCAGGC 59.426 66.667 0.00 0.00 40.77 4.85
5031 5066 1.979693 GACAGTCTCCGGTCAGGCT 60.980 63.158 0.00 0.00 40.77 4.58
5032 5067 2.575993 CAGTCTCCGGTCAGGCTG 59.424 66.667 10.09 10.09 39.70 4.85
5033 5068 2.681778 AGTCTCCGGTCAGGCTGG 60.682 66.667 15.73 0.00 45.18 4.85
5036 5071 4.463879 CTCCGGTCAGGCTGGCAG 62.464 72.222 22.23 17.33 43.46 4.85
5229 5272 1.925972 GAACAAGCCCTCCCCTCCT 60.926 63.158 0.00 0.00 0.00 3.69
5232 5275 4.439901 AAGCCCTCCCCTCCTCCC 62.440 72.222 0.00 0.00 0.00 4.30
5236 5279 3.711782 CCTCCCCTCCTCCCCCTT 61.712 72.222 0.00 0.00 0.00 3.95
5238 5281 2.543637 TCCCCTCCTCCCCCTTCT 60.544 66.667 0.00 0.00 0.00 2.85
5239 5282 2.367512 CCCCTCCTCCCCCTTCTG 60.368 72.222 0.00 0.00 0.00 3.02
5240 5283 2.367512 CCCTCCTCCCCCTTCTGG 60.368 72.222 0.00 0.00 0.00 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
413 417 1.656441 CTTGCTGGTGGCTGTCAAC 59.344 57.895 0.00 0.00 42.39 3.18
415 419 2.595463 GCTTGCTGGTGGCTGTCA 60.595 61.111 0.00 0.00 42.39 3.58
764 771 5.477291 TGATAAGATCGACAGGGGAGAATAC 59.523 44.000 0.00 0.00 0.00 1.89
765 772 5.641155 TGATAAGATCGACAGGGGAGAATA 58.359 41.667 0.00 0.00 0.00 1.75
766 773 4.483950 TGATAAGATCGACAGGGGAGAAT 58.516 43.478 0.00 0.00 0.00 2.40
767 774 3.910989 TGATAAGATCGACAGGGGAGAA 58.089 45.455 0.00 0.00 0.00 2.87
768 775 3.595190 TGATAAGATCGACAGGGGAGA 57.405 47.619 0.00 0.00 0.00 3.71
769 776 3.006323 CCTTGATAAGATCGACAGGGGAG 59.994 52.174 0.00 0.00 0.00 4.30
770 777 2.965831 CCTTGATAAGATCGACAGGGGA 59.034 50.000 0.00 0.00 0.00 4.81
771 778 2.548920 GCCTTGATAAGATCGACAGGGG 60.549 54.545 11.79 7.44 31.62 4.79
772 779 2.760374 GCCTTGATAAGATCGACAGGG 58.240 52.381 0.00 0.00 33.61 4.45
773 780 2.223829 ACGCCTTGATAAGATCGACAGG 60.224 50.000 0.00 0.00 0.00 4.00
774 781 2.791560 CACGCCTTGATAAGATCGACAG 59.208 50.000 0.00 0.00 0.00 3.51
775 782 2.165641 ACACGCCTTGATAAGATCGACA 59.834 45.455 0.00 0.00 0.00 4.35
776 783 2.810650 ACACGCCTTGATAAGATCGAC 58.189 47.619 0.00 0.00 0.00 4.20
777 784 4.848562 ATACACGCCTTGATAAGATCGA 57.151 40.909 0.00 0.00 0.00 3.59
778 785 5.907197 AAATACACGCCTTGATAAGATCG 57.093 39.130 0.00 0.00 0.00 3.69
779 786 9.434559 GTTTAAAATACACGCCTTGATAAGATC 57.565 33.333 0.00 0.00 0.00 2.75
780 787 8.403236 GGTTTAAAATACACGCCTTGATAAGAT 58.597 33.333 0.00 0.00 0.00 2.40
781 788 7.390996 TGGTTTAAAATACACGCCTTGATAAGA 59.609 33.333 0.00 0.00 0.00 2.10
782 789 7.531716 TGGTTTAAAATACACGCCTTGATAAG 58.468 34.615 0.00 0.00 0.00 1.73
783 790 7.450124 TGGTTTAAAATACACGCCTTGATAA 57.550 32.000 0.00 0.00 0.00 1.75
784 791 6.403855 GCTGGTTTAAAATACACGCCTTGATA 60.404 38.462 0.00 0.00 0.00 2.15
785 792 5.621329 GCTGGTTTAAAATACACGCCTTGAT 60.621 40.000 0.00 0.00 0.00 2.57
786 793 4.320641 GCTGGTTTAAAATACACGCCTTGA 60.321 41.667 0.00 0.00 0.00 3.02
787 794 3.917985 GCTGGTTTAAAATACACGCCTTG 59.082 43.478 0.00 0.00 0.00 3.61
788 795 3.057104 GGCTGGTTTAAAATACACGCCTT 60.057 43.478 14.65 0.00 32.76 4.35
789 796 2.490509 GGCTGGTTTAAAATACACGCCT 59.509 45.455 14.65 0.00 32.76 5.52
790 797 2.229302 TGGCTGGTTTAAAATACACGCC 59.771 45.455 14.85 14.85 34.74 5.68
791 798 3.239254 GTGGCTGGTTTAAAATACACGC 58.761 45.455 0.00 0.00 0.00 5.34
792 799 4.491234 TGTGGCTGGTTTAAAATACACG 57.509 40.909 0.00 0.00 0.00 4.49
793 800 6.025280 CGTATGTGGCTGGTTTAAAATACAC 58.975 40.000 0.00 0.00 0.00 2.90
794 801 5.124138 CCGTATGTGGCTGGTTTAAAATACA 59.876 40.000 0.00 0.00 0.00 2.29
795 802 5.354792 TCCGTATGTGGCTGGTTTAAAATAC 59.645 40.000 0.00 0.00 0.00 1.89
796 803 5.498393 TCCGTATGTGGCTGGTTTAAAATA 58.502 37.500 0.00 0.00 0.00 1.40
797 804 4.337145 TCCGTATGTGGCTGGTTTAAAAT 58.663 39.130 0.00 0.00 0.00 1.82
798 805 3.752665 TCCGTATGTGGCTGGTTTAAAA 58.247 40.909 0.00 0.00 0.00 1.52
799 806 3.340034 CTCCGTATGTGGCTGGTTTAAA 58.660 45.455 0.00 0.00 0.00 1.52
800 807 2.937873 GCTCCGTATGTGGCTGGTTTAA 60.938 50.000 0.00 0.00 0.00 1.52
801 808 1.406341 GCTCCGTATGTGGCTGGTTTA 60.406 52.381 0.00 0.00 0.00 2.01
802 809 0.676782 GCTCCGTATGTGGCTGGTTT 60.677 55.000 0.00 0.00 0.00 3.27
803 810 1.078426 GCTCCGTATGTGGCTGGTT 60.078 57.895 0.00 0.00 0.00 3.67
804 811 2.584608 GCTCCGTATGTGGCTGGT 59.415 61.111 0.00 0.00 0.00 4.00
805 812 2.586079 CGCTCCGTATGTGGCTGG 60.586 66.667 0.00 0.00 0.00 4.85
806 813 2.572095 TTCCGCTCCGTATGTGGCTG 62.572 60.000 0.00 0.00 35.25 4.85
807 814 1.895020 TTTCCGCTCCGTATGTGGCT 61.895 55.000 0.00 0.00 35.25 4.75
808 815 1.448893 TTTCCGCTCCGTATGTGGC 60.449 57.895 0.00 0.00 35.25 5.01
809 816 1.418342 CGTTTCCGCTCCGTATGTGG 61.418 60.000 0.00 0.00 36.49 4.17
810 817 0.457166 TCGTTTCCGCTCCGTATGTG 60.457 55.000 0.00 0.00 0.00 3.21
811 818 0.458669 ATCGTTTCCGCTCCGTATGT 59.541 50.000 0.00 0.00 0.00 2.29
812 819 1.129326 GATCGTTTCCGCTCCGTATG 58.871 55.000 0.00 0.00 0.00 2.39
813 820 0.742505 TGATCGTTTCCGCTCCGTAT 59.257 50.000 0.00 0.00 0.00 3.06
814 821 0.742505 ATGATCGTTTCCGCTCCGTA 59.257 50.000 0.00 0.00 0.00 4.02
815 822 0.527817 GATGATCGTTTCCGCTCCGT 60.528 55.000 0.00 0.00 0.00 4.69
816 823 1.215655 GGATGATCGTTTCCGCTCCG 61.216 60.000 0.00 0.00 0.00 4.63
817 824 0.179084 TGGATGATCGTTTCCGCTCC 60.179 55.000 5.10 0.00 34.58 4.70
818 825 1.594862 CTTGGATGATCGTTTCCGCTC 59.405 52.381 5.10 0.00 34.58 5.03
819 826 1.656652 CTTGGATGATCGTTTCCGCT 58.343 50.000 5.10 0.00 34.58 5.52
820 827 0.028110 GCTTGGATGATCGTTTCCGC 59.972 55.000 5.10 0.88 34.58 5.54
821 828 0.301687 CGCTTGGATGATCGTTTCCG 59.698 55.000 5.10 0.00 34.58 4.30
822 829 0.657840 CCGCTTGGATGATCGTTTCC 59.342 55.000 2.93 2.93 33.02 3.13
823 830 0.657840 CCCGCTTGGATGATCGTTTC 59.342 55.000 0.00 0.00 35.39 2.78
824 831 0.748005 CCCCGCTTGGATGATCGTTT 60.748 55.000 0.00 0.00 35.39 3.60
825 832 1.153168 CCCCGCTTGGATGATCGTT 60.153 57.895 0.00 0.00 35.39 3.85
826 833 2.505982 CCCCGCTTGGATGATCGT 59.494 61.111 0.00 0.00 35.39 3.73
827 834 2.974698 GCCCCGCTTGGATGATCG 60.975 66.667 0.00 0.00 35.39 3.69
828 835 2.974698 CGCCCCGCTTGGATGATC 60.975 66.667 0.00 0.00 35.39 2.92
829 836 3.344137 AACGCCCCGCTTGGATGAT 62.344 57.895 0.00 0.00 35.39 2.45
830 837 4.028490 AACGCCCCGCTTGGATGA 62.028 61.111 0.00 0.00 35.39 2.92
831 838 3.814268 CAACGCCCCGCTTGGATG 61.814 66.667 0.00 0.00 35.39 3.51
835 842 2.636778 AAAAACCAACGCCCCGCTTG 62.637 55.000 0.00 0.00 0.00 4.01
836 843 2.358193 GAAAAACCAACGCCCCGCTT 62.358 55.000 0.00 0.00 0.00 4.68
837 844 2.835895 AAAAACCAACGCCCCGCT 60.836 55.556 0.00 0.00 0.00 5.52
838 845 2.355363 GAAAAACCAACGCCCCGC 60.355 61.111 0.00 0.00 0.00 6.13
839 846 0.103390 AAAGAAAAACCAACGCCCCG 59.897 50.000 0.00 0.00 0.00 5.73
840 847 2.319136 AAAAGAAAAACCAACGCCCC 57.681 45.000 0.00 0.00 0.00 5.80
841 848 2.283086 CGAAAAAGAAAAACCAACGCCC 59.717 45.455 0.00 0.00 0.00 6.13
842 849 2.924926 ACGAAAAAGAAAAACCAACGCC 59.075 40.909 0.00 0.00 0.00 5.68
843 850 4.571375 AACGAAAAAGAAAAACCAACGC 57.429 36.364 0.00 0.00 0.00 4.84
844 851 7.212032 ACATAACGAAAAAGAAAAACCAACG 57.788 32.000 0.00 0.00 0.00 4.10
845 852 8.402326 AGACATAACGAAAAAGAAAAACCAAC 57.598 30.769 0.00 0.00 0.00 3.77
846 853 8.865001 CAAGACATAACGAAAAAGAAAAACCAA 58.135 29.630 0.00 0.00 0.00 3.67
847 854 8.244802 TCAAGACATAACGAAAAAGAAAAACCA 58.755 29.630 0.00 0.00 0.00 3.67
848 855 8.529102 GTCAAGACATAACGAAAAAGAAAAACC 58.471 33.333 0.00 0.00 0.00 3.27
849 856 9.285770 AGTCAAGACATAACGAAAAAGAAAAAC 57.714 29.630 2.72 0.00 0.00 2.43
850 857 9.849166 AAGTCAAGACATAACGAAAAAGAAAAA 57.151 25.926 2.72 0.00 0.00 1.94
851 858 9.284594 CAAGTCAAGACATAACGAAAAAGAAAA 57.715 29.630 2.72 0.00 0.00 2.29
852 859 8.455682 ACAAGTCAAGACATAACGAAAAAGAAA 58.544 29.630 2.72 0.00 0.00 2.52
853 860 7.981142 ACAAGTCAAGACATAACGAAAAAGAA 58.019 30.769 2.72 0.00 0.00 2.52
854 861 7.548196 ACAAGTCAAGACATAACGAAAAAGA 57.452 32.000 2.72 0.00 0.00 2.52
855 862 8.548721 AGTACAAGTCAAGACATAACGAAAAAG 58.451 33.333 2.72 0.00 0.00 2.27
856 863 8.428186 AGTACAAGTCAAGACATAACGAAAAA 57.572 30.769 2.72 0.00 0.00 1.94
857 864 7.096353 CGAGTACAAGTCAAGACATAACGAAAA 60.096 37.037 2.72 0.00 0.00 2.29
858 865 6.361481 CGAGTACAAGTCAAGACATAACGAAA 59.639 38.462 2.72 0.00 0.00 3.46
859 866 5.854866 CGAGTACAAGTCAAGACATAACGAA 59.145 40.000 2.72 0.00 0.00 3.85
860 867 5.049198 ACGAGTACAAGTCAAGACATAACGA 60.049 40.000 2.72 0.00 0.00 3.85
861 868 5.152097 ACGAGTACAAGTCAAGACATAACG 58.848 41.667 2.72 0.00 0.00 3.18
862 869 7.524912 TCTACGAGTACAAGTCAAGACATAAC 58.475 38.462 2.72 0.00 0.00 1.89
863 870 7.389884 ACTCTACGAGTACAAGTCAAGACATAA 59.610 37.037 2.72 0.00 41.51 1.90
864 871 6.877855 ACTCTACGAGTACAAGTCAAGACATA 59.122 38.462 2.72 0.00 41.51 2.29
865 872 5.706369 ACTCTACGAGTACAAGTCAAGACAT 59.294 40.000 2.72 0.00 41.51 3.06
866 873 5.061853 ACTCTACGAGTACAAGTCAAGACA 58.938 41.667 2.72 0.00 41.51 3.41
867 874 5.610235 ACTCTACGAGTACAAGTCAAGAC 57.390 43.478 0.00 0.00 41.51 3.01
878 885 5.355350 GGCTTAACCAAGTACTCTACGAGTA 59.645 44.000 0.00 0.00 40.18 2.59
879 886 4.157472 GGCTTAACCAAGTACTCTACGAGT 59.843 45.833 0.00 1.82 41.60 4.18
880 887 4.670347 GGCTTAACCAAGTACTCTACGAG 58.330 47.826 0.00 0.00 38.86 4.18
881 888 4.708726 GGCTTAACCAAGTACTCTACGA 57.291 45.455 0.00 0.00 38.86 3.43
894 901 2.092323 GAGATTGGGTGTGGCTTAACC 58.908 52.381 0.00 0.00 39.84 2.85
895 902 2.790433 TGAGATTGGGTGTGGCTTAAC 58.210 47.619 0.00 0.00 0.00 2.01
896 903 3.737559 ATGAGATTGGGTGTGGCTTAA 57.262 42.857 0.00 0.00 0.00 1.85
897 904 3.737559 AATGAGATTGGGTGTGGCTTA 57.262 42.857 0.00 0.00 0.00 3.09
898 905 2.610438 AATGAGATTGGGTGTGGCTT 57.390 45.000 0.00 0.00 0.00 4.35
899 906 2.564062 CAAAATGAGATTGGGTGTGGCT 59.436 45.455 0.00 0.00 0.00 4.75
900 907 2.354003 CCAAAATGAGATTGGGTGTGGC 60.354 50.000 0.00 0.00 42.95 5.01
901 908 3.324556 AACCAAAATGAGATTGGGTGTGG 59.675 43.478 9.84 0.00 45.99 4.17
902 909 4.605640 AACCAAAATGAGATTGGGTGTG 57.394 40.909 9.84 0.00 45.99 3.82
908 915 9.612620 GTTAGTCACTAAACCAAAATGAGATTG 57.387 33.333 0.00 0.00 0.00 2.67
909 916 9.574516 AGTTAGTCACTAAACCAAAATGAGATT 57.425 29.630 0.00 0.00 31.97 2.40
911 918 9.485206 GTAGTTAGTCACTAAACCAAAATGAGA 57.515 33.333 0.00 0.00 39.86 3.27
912 919 8.718734 GGTAGTTAGTCACTAAACCAAAATGAG 58.281 37.037 12.05 0.00 39.86 2.90
913 920 8.434392 AGGTAGTTAGTCACTAAACCAAAATGA 58.566 33.333 17.32 0.00 39.86 2.57
914 921 8.617290 AGGTAGTTAGTCACTAAACCAAAATG 57.383 34.615 17.32 0.00 39.86 2.32
915 922 9.063615 CAAGGTAGTTAGTCACTAAACCAAAAT 57.936 33.333 17.32 2.30 39.86 1.82
916 923 8.048514 ACAAGGTAGTTAGTCACTAAACCAAAA 58.951 33.333 17.32 0.00 39.86 2.44
917 924 7.567458 ACAAGGTAGTTAGTCACTAAACCAAA 58.433 34.615 17.32 0.00 39.86 3.28
918 925 7.070322 AGACAAGGTAGTTAGTCACTAAACCAA 59.930 37.037 17.32 0.00 39.86 3.67
919 926 6.552350 AGACAAGGTAGTTAGTCACTAAACCA 59.448 38.462 17.32 0.00 39.86 3.67
920 927 6.990798 AGACAAGGTAGTTAGTCACTAAACC 58.009 40.000 9.65 9.65 39.86 3.27
921 928 9.007901 TCTAGACAAGGTAGTTAGTCACTAAAC 57.992 37.037 0.00 0.00 39.86 2.01
922 929 9.578576 TTCTAGACAAGGTAGTTAGTCACTAAA 57.421 33.333 0.00 0.00 39.86 1.85
923 930 9.578576 TTTCTAGACAAGGTAGTTAGTCACTAA 57.421 33.333 0.00 0.00 39.86 2.24
924 931 9.578576 TTTTCTAGACAAGGTAGTTAGTCACTA 57.421 33.333 0.00 0.00 36.88 2.74
925 932 8.474710 TTTTCTAGACAAGGTAGTTAGTCACT 57.525 34.615 0.00 0.00 39.87 3.41
950 957 4.907269 AGGTGGAAATGGGTGAAGATTTTT 59.093 37.500 0.00 0.00 0.00 1.94
951 958 4.492646 AGGTGGAAATGGGTGAAGATTTT 58.507 39.130 0.00 0.00 0.00 1.82
952 959 4.089361 GAGGTGGAAATGGGTGAAGATTT 58.911 43.478 0.00 0.00 0.00 2.17
953 960 3.334881 AGAGGTGGAAATGGGTGAAGATT 59.665 43.478 0.00 0.00 0.00 2.40
954 961 2.922283 AGAGGTGGAAATGGGTGAAGAT 59.078 45.455 0.00 0.00 0.00 2.40
955 962 2.348472 AGAGGTGGAAATGGGTGAAGA 58.652 47.619 0.00 0.00 0.00 2.87
956 963 2.887151 AGAGGTGGAAATGGGTGAAG 57.113 50.000 0.00 0.00 0.00 3.02
957 964 3.611025 AAAGAGGTGGAAATGGGTGAA 57.389 42.857 0.00 0.00 0.00 3.18
958 965 3.611025 AAAAGAGGTGGAAATGGGTGA 57.389 42.857 0.00 0.00 0.00 4.02
959 966 4.021456 GGTAAAAAGAGGTGGAAATGGGTG 60.021 45.833 0.00 0.00 0.00 4.61
960 967 4.140782 AGGTAAAAAGAGGTGGAAATGGGT 60.141 41.667 0.00 0.00 0.00 4.51
961 968 4.416516 AGGTAAAAAGAGGTGGAAATGGG 58.583 43.478 0.00 0.00 0.00 4.00
962 969 4.156008 CGAGGTAAAAAGAGGTGGAAATGG 59.844 45.833 0.00 0.00 0.00 3.16
963 970 4.156008 CCGAGGTAAAAAGAGGTGGAAATG 59.844 45.833 0.00 0.00 0.00 2.32
964 971 4.202535 ACCGAGGTAAAAAGAGGTGGAAAT 60.203 41.667 0.00 0.00 0.00 2.17
965 972 3.136992 ACCGAGGTAAAAAGAGGTGGAAA 59.863 43.478 0.00 0.00 0.00 3.13
966 973 2.707257 ACCGAGGTAAAAAGAGGTGGAA 59.293 45.455 0.00 0.00 0.00 3.53
967 974 2.301009 GACCGAGGTAAAAAGAGGTGGA 59.699 50.000 0.00 0.00 31.35 4.02
968 975 2.614734 GGACCGAGGTAAAAAGAGGTGG 60.615 54.545 0.00 0.00 31.35 4.61
969 976 2.038033 TGGACCGAGGTAAAAAGAGGTG 59.962 50.000 0.00 0.00 31.35 4.00
970 977 2.332117 TGGACCGAGGTAAAAAGAGGT 58.668 47.619 0.00 0.00 34.27 3.85
971 978 3.197983 AGATGGACCGAGGTAAAAAGAGG 59.802 47.826 0.00 0.00 0.00 3.69
972 979 4.473477 AGATGGACCGAGGTAAAAAGAG 57.527 45.455 0.00 0.00 0.00 2.85
973 980 4.161001 GGTAGATGGACCGAGGTAAAAAGA 59.839 45.833 0.00 0.00 0.00 2.52
974 981 4.161754 AGGTAGATGGACCGAGGTAAAAAG 59.838 45.833 0.00 0.00 44.88 2.27
975 982 4.098894 AGGTAGATGGACCGAGGTAAAAA 58.901 43.478 0.00 0.00 44.88 1.94
976 983 3.703052 GAGGTAGATGGACCGAGGTAAAA 59.297 47.826 0.00 0.00 44.88 1.52
977 984 3.294214 GAGGTAGATGGACCGAGGTAAA 58.706 50.000 0.00 0.00 44.88 2.01
978 985 2.423947 GGAGGTAGATGGACCGAGGTAA 60.424 54.545 0.00 0.00 44.88 2.85
979 986 1.144503 GGAGGTAGATGGACCGAGGTA 59.855 57.143 0.00 0.00 44.88 3.08
980 987 0.106116 GGAGGTAGATGGACCGAGGT 60.106 60.000 0.00 0.00 44.88 3.85
981 988 0.106167 TGGAGGTAGATGGACCGAGG 60.106 60.000 0.00 0.00 44.88 4.63
982 989 1.615883 CATGGAGGTAGATGGACCGAG 59.384 57.143 0.00 0.00 44.88 4.63
983 990 1.704641 CATGGAGGTAGATGGACCGA 58.295 55.000 0.00 0.00 44.88 4.69
984 991 0.681733 CCATGGAGGTAGATGGACCG 59.318 60.000 5.56 0.00 44.88 4.79
985 992 2.103153 TCCATGGAGGTAGATGGACC 57.897 55.000 11.44 0.00 42.67 4.46
1233 1240 2.818714 CTCTGGCTCGCCTGCTTG 60.819 66.667 9.65 0.00 36.94 4.01
1312 1319 4.180946 CCGAGACCTGACGCCTCG 62.181 72.222 0.00 0.00 46.48 4.63
1440 1447 1.251527 GGTCTCTGCCGAGAACCAGA 61.252 60.000 11.86 0.00 46.21 3.86
1528 1538 4.130281 CTTCCGTCGTTTCGCGCC 62.130 66.667 0.00 0.00 41.07 6.53
1640 1650 2.741092 GCAGGTCGAAGTGGTCCA 59.259 61.111 0.00 0.00 0.00 4.02
1791 1801 0.178861 ACCTCCTGGACCTGACCAAT 60.179 55.000 0.00 0.00 39.59 3.16
1805 1815 2.372172 TCAAGGACAAGAAGGAACCTCC 59.628 50.000 0.00 0.00 36.58 4.30
1849 1859 2.398498 CACGAGTGTCTGAAACTCCAG 58.602 52.381 19.70 10.86 40.85 3.86
1953 1963 3.136443 ACCCATTCAGACAGAACAGTTCA 59.864 43.478 15.85 0.00 39.49 3.18
1962 1972 1.553248 TCCGGTAACCCATTCAGACAG 59.447 52.381 0.00 0.00 0.00 3.51
2175 2185 1.211457 CCTTGCTCAAGCTCCCATAGT 59.789 52.381 3.32 0.00 42.66 2.12
2176 2186 1.211457 ACCTTGCTCAAGCTCCCATAG 59.789 52.381 3.32 0.00 42.66 2.23
2178 2188 0.323178 CACCTTGCTCAAGCTCCCAT 60.323 55.000 3.32 0.00 42.66 4.00
2190 2200 3.645268 AATCCCTCCGGCACCTTGC 62.645 63.158 0.00 0.00 44.08 4.01
2205 2215 0.249114 GTCGAAGAGCCGGGAGAATC 60.249 60.000 2.18 0.00 36.95 2.52
2275 2285 0.834612 TGCCCCTTCGGAAATATCGT 59.165 50.000 0.00 0.00 0.00 3.73
2293 2303 4.022416 CAGAGTCTCCTTCCCGAAGATATG 60.022 50.000 6.01 0.00 40.79 1.78
2507 2517 2.099756 GGGATTTTCGGAAGGCATCTTG 59.900 50.000 0.00 0.00 32.52 3.02
2559 2569 8.854117 AGAAACTTGCTCAGTTCAAGATATTTT 58.146 29.630 9.40 0.58 45.77 1.82
2563 2573 6.992123 TCAAGAAACTTGCTCAGTTCAAGATA 59.008 34.615 9.40 0.00 45.77 1.98
2590 2600 2.819608 GCAGCTTTGTGTATCTTCCCAA 59.180 45.455 0.00 0.00 0.00 4.12
2595 2605 2.076863 GACCGCAGCTTTGTGTATCTT 58.923 47.619 0.00 0.00 0.00 2.40
2616 2626 5.095490 CCAGACATACCGAAAATCAAAAGC 58.905 41.667 0.00 0.00 0.00 3.51
2626 2636 1.271856 TCTTGCCCAGACATACCGAA 58.728 50.000 0.00 0.00 0.00 4.30
2769 2779 9.551734 CATTGGATCTTTGTGTAAGAGATATCA 57.448 33.333 5.32 0.00 45.69 2.15
2827 2837 5.108141 CGTTCAACACATTCAGAATTTGCAG 60.108 40.000 8.92 3.02 0.00 4.41
2844 2854 2.678324 CTCTTCAGAGGGACGTTCAAC 58.322 52.381 0.00 0.00 38.48 3.18
2845 2855 1.000955 GCTCTTCAGAGGGACGTTCAA 59.999 52.381 5.97 0.00 42.29 2.69
2891 2901 4.935205 TCGTGTAACATTTCCTCAGATTGG 59.065 41.667 0.00 0.00 35.74 3.16
2912 2922 4.083537 TCACCAAAGAAATCGGTTCATTCG 60.084 41.667 3.16 0.00 38.86 3.34
2926 2936 8.806429 TTGCTTATATTTCTCATCACCAAAGA 57.194 30.769 0.00 0.00 0.00 2.52
2930 2940 9.187996 TCAAATTGCTTATATTTCTCATCACCA 57.812 29.630 0.00 0.00 0.00 4.17
2940 2950 8.892723 TCGAGTGATGTCAAATTGCTTATATTT 58.107 29.630 0.00 0.00 0.00 1.40
2973 2983 7.666388 TGTCCTTCCGGAATTTCAAATACTAAA 59.334 33.333 19.21 0.00 42.08 1.85
2976 2986 5.566469 TGTCCTTCCGGAATTTCAAATACT 58.434 37.500 19.21 0.00 42.08 2.12
2992 3002 2.087646 GATTCTGTGCCCTTGTCCTTC 58.912 52.381 0.00 0.00 0.00 3.46
3055 3065 7.912056 TCACAACATTCTCAAGATTCCTAAG 57.088 36.000 0.00 0.00 0.00 2.18
3059 3069 5.707298 TCCTTCACAACATTCTCAAGATTCC 59.293 40.000 0.00 0.00 0.00 3.01
3093 3103 2.704725 TTGCGTTCATCTTGGCTTTC 57.295 45.000 0.00 0.00 0.00 2.62
3109 3119 4.148338 ACCGTTGTAGGTGTGCTTTTGC 62.148 50.000 0.00 0.00 44.07 3.68
3117 3127 3.764237 AGAATCAACCGTTGTAGGTGT 57.236 42.857 11.01 0.00 45.21 4.16
3153 3163 6.093495 CGCTAAATTCTGGATTACCAACTTCA 59.907 38.462 0.00 0.00 46.32 3.02
3158 3168 5.008613 GCATCGCTAAATTCTGGATTACCAA 59.991 40.000 0.00 0.00 46.32 3.67
3174 3184 5.660460 TCTTCTGAACATTTAGCATCGCTA 58.340 37.500 0.00 0.00 40.44 4.26
3178 3188 6.615088 TGCTTTCTTCTGAACATTTAGCATC 58.385 36.000 0.00 0.00 36.62 3.91
3186 3196 8.579006 TCAACAATAATGCTTTCTTCTGAACAT 58.421 29.630 0.00 0.00 31.02 2.71
3188 3198 8.801715 TTCAACAATAATGCTTTCTTCTGAAC 57.198 30.769 0.00 0.00 31.02 3.18
3193 3203 8.976986 AGTGATTCAACAATAATGCTTTCTTC 57.023 30.769 0.00 0.00 0.00 2.87
3217 3227 0.622665 AGGTTGGGATGAGGCTCAAG 59.377 55.000 22.84 0.00 0.00 3.02
3225 3235 1.661463 AGCTCTCAAGGTTGGGATGA 58.339 50.000 0.00 0.00 37.00 2.92
3243 3253 5.455392 CCACTGTAGTGCTTCAATTTCAAG 58.545 41.667 6.50 0.00 44.34 3.02
3299 3309 2.357009 AGCTCACACAAACAGCAAAGAG 59.643 45.455 0.00 0.00 35.46 2.85
3401 3411 3.165875 TCATCGAGACTCCTCAGGTTTT 58.834 45.455 0.00 0.00 39.39 2.43
3441 3451 1.988293 TTTCGGTGATTCCCTGCAAA 58.012 45.000 0.00 0.00 0.00 3.68
3512 3522 0.957888 GCGAAGAGAAGCAAAGCCCT 60.958 55.000 0.00 0.00 0.00 5.19
3591 3601 4.517285 TCATAAGCAACTCCTCCATTGAC 58.483 43.478 0.00 0.00 0.00 3.18
3639 3649 1.246056 TGTGCAAGCAGGATGGAAGC 61.246 55.000 0.00 0.00 35.86 3.86
3659 3669 1.362406 GCTTACGAGTGAAGGCAGGC 61.362 60.000 0.00 0.00 0.00 4.85
3732 3742 0.383590 CTCGGAGTGATCGCATCTGT 59.616 55.000 9.33 0.00 0.00 3.41
3736 3746 0.829602 ATCCCTCGGAGTGATCGCAT 60.830 55.000 9.33 0.00 34.05 4.73
3810 3820 2.865119 TGTGCAGGTTGATGAGTGAT 57.135 45.000 0.00 0.00 0.00 3.06
3903 3913 1.004440 GGTCAGGCACTCGAGCTTT 60.004 57.895 13.61 0.00 34.60 3.51
3964 3974 1.815840 GGGTCTTAAGAGCAGGCGC 60.816 63.158 30.11 13.10 43.82 6.53
3965 3975 0.250513 AAGGGTCTTAAGAGCAGGCG 59.749 55.000 30.11 0.00 43.82 5.52
3966 3976 1.003696 ACAAGGGTCTTAAGAGCAGGC 59.996 52.381 30.11 16.53 43.82 4.85
4002 4012 1.542328 CCATGAACAACCACGGAGTCA 60.542 52.381 0.00 0.00 41.61 3.41
4092 4102 1.202806 TCTTCAGGGAGTGCAACAAGG 60.203 52.381 0.00 0.00 41.43 3.61
4113 4123 4.080807 TGGAGAGTGGACAAAGTGTACAAA 60.081 41.667 0.00 0.00 43.90 2.83
4114 4124 3.452990 TGGAGAGTGGACAAAGTGTACAA 59.547 43.478 0.00 0.00 43.90 2.41
4118 4128 2.119495 ACTGGAGAGTGGACAAAGTGT 58.881 47.619 0.00 0.00 0.00 3.55
4128 4138 2.654749 TACGCATGAACTGGAGAGTG 57.345 50.000 0.00 0.00 30.61 3.51
4141 4151 4.316205 TCGGACAGTTGAATATACGCAT 57.684 40.909 0.00 0.00 0.00 4.73
4181 4191 1.448013 GAGACTGGCAAGCCCGTAC 60.448 63.158 8.17 2.92 33.67 3.67
4210 4220 0.318699 TGGCACTTCTCGAACGACAG 60.319 55.000 0.00 0.00 0.00 3.51
4215 4225 2.027625 CGGGTGGCACTTCTCGAAC 61.028 63.158 18.45 0.00 0.00 3.95
4251 4261 9.600646 GTATTGTAAGAAAACTTGAGCTTCTTC 57.399 33.333 10.32 5.83 39.50 2.87
4292 4302 1.901085 GCACTCTGATCCCCGAGTT 59.099 57.895 6.67 0.00 38.37 3.01
4297 4307 0.179000 ATGTTCGCACTCTGATCCCC 59.821 55.000 0.00 0.00 0.00 4.81
4299 4309 1.203928 CGATGTTCGCACTCTGATCC 58.796 55.000 0.00 0.00 31.14 3.36
4300 4310 1.203928 CCGATGTTCGCACTCTGATC 58.796 55.000 0.00 0.00 38.82 2.92
4301 4311 0.807667 GCCGATGTTCGCACTCTGAT 60.808 55.000 0.00 0.00 38.82 2.90
4304 4314 2.507102 CGCCGATGTTCGCACTCT 60.507 61.111 0.00 0.00 38.82 3.24
4305 4315 2.809601 ACGCCGATGTTCGCACTC 60.810 61.111 0.00 0.00 38.82 3.51
4308 4318 3.410516 CACACGCCGATGTTCGCA 61.411 61.111 0.00 0.00 38.82 5.10
4321 4331 0.040067 GTAAGCTGCAGGCAACACAC 60.040 55.000 17.12 0.00 44.79 3.82
4389 4399 8.655935 AATGAAATTGAAAAGGACACTCCTAT 57.344 30.769 0.00 0.00 40.19 2.57
4390 4400 8.359642 CAAATGAAATTGAAAAGGACACTCCTA 58.640 33.333 0.00 0.00 41.22 2.94
4429 4439 5.560148 CATTTTATTTGAGTTCCCGAGACG 58.440 41.667 0.00 0.00 0.00 4.18
4453 4467 3.044986 CACAAGCTGAACAAATTCCACG 58.955 45.455 0.00 0.00 33.49 4.94
4460 4474 3.278574 ACTAGCACACAAGCTGAACAAA 58.721 40.909 0.00 0.00 46.11 2.83
4463 4477 3.914312 TCTACTAGCACACAAGCTGAAC 58.086 45.455 0.00 0.00 46.11 3.18
4478 4492 8.414003 CAGTTACCTGTATGCAGATTTCTACTA 58.586 37.037 12.93 0.00 45.28 1.82
4479 4493 7.268586 CAGTTACCTGTATGCAGATTTCTACT 58.731 38.462 12.93 4.20 45.28 2.57
4480 4494 6.018669 GCAGTTACCTGTATGCAGATTTCTAC 60.019 42.308 12.93 2.09 45.28 2.59
4483 4497 4.635765 TGCAGTTACCTGTATGCAGATTTC 59.364 41.667 12.93 0.74 45.28 2.17
4498 4512 7.865385 TCAAAACATGGAAGTTAATGCAGTTAC 59.135 33.333 0.00 0.00 0.00 2.50
4508 4522 6.119536 ACACTCTGTCAAAACATGGAAGTTA 58.880 36.000 0.00 0.00 34.13 2.24
4509 4523 4.949856 ACACTCTGTCAAAACATGGAAGTT 59.050 37.500 0.00 0.00 34.13 2.66
4510 4524 4.526970 ACACTCTGTCAAAACATGGAAGT 58.473 39.130 0.00 0.00 34.13 3.01
4517 4531 5.432645 TCATGGTTACACTCTGTCAAAACA 58.567 37.500 0.00 0.00 0.00 2.83
4521 4535 5.482163 TGATCATGGTTACACTCTGTCAA 57.518 39.130 0.00 0.00 0.00 3.18
4524 4538 6.240894 ACAAATGATCATGGTTACACTCTGT 58.759 36.000 9.46 0.00 0.00 3.41
4527 4541 7.144722 TCAACAAATGATCATGGTTACACTC 57.855 36.000 19.77 0.00 31.50 3.51
4530 4544 6.389091 GCTTCAACAAATGATCATGGTTACA 58.611 36.000 19.77 10.82 38.03 2.41
4531 4545 5.807011 GGCTTCAACAAATGATCATGGTTAC 59.193 40.000 19.77 12.43 38.03 2.50
4539 4553 5.776744 AGAACAAGGCTTCAACAAATGATC 58.223 37.500 0.00 0.00 38.03 2.92
4543 4557 4.122046 GCAAGAACAAGGCTTCAACAAAT 58.878 39.130 0.00 0.00 0.00 2.32
4573 4587 6.613271 TCCTCAGATAGAAAGCTTGTCCTAAT 59.387 38.462 0.00 0.00 0.00 1.73
4574 4588 5.958380 TCCTCAGATAGAAAGCTTGTCCTAA 59.042 40.000 0.00 0.00 0.00 2.69
4576 4590 4.357325 TCCTCAGATAGAAAGCTTGTCCT 58.643 43.478 0.00 0.28 0.00 3.85
4577 4591 4.744795 TCCTCAGATAGAAAGCTTGTCC 57.255 45.455 0.00 0.00 0.00 4.02
4579 4593 5.247110 TGAGTTCCTCAGATAGAAAGCTTGT 59.753 40.000 0.00 0.00 35.39 3.16
4580 4594 5.728471 TGAGTTCCTCAGATAGAAAGCTTG 58.272 41.667 0.00 0.00 35.39 4.01
4582 4596 6.365970 TTTGAGTTCCTCAGATAGAAAGCT 57.634 37.500 0.00 0.00 41.75 3.74
4589 4603 5.425217 TGGTGCTATTTGAGTTCCTCAGATA 59.575 40.000 4.89 4.89 41.75 1.98
4591 4605 3.582647 TGGTGCTATTTGAGTTCCTCAGA 59.417 43.478 0.00 0.00 41.75 3.27
4592 4606 3.942829 TGGTGCTATTTGAGTTCCTCAG 58.057 45.455 0.00 0.00 41.75 3.35
4593 4607 4.202461 ACTTGGTGCTATTTGAGTTCCTCA 60.202 41.667 0.00 0.00 38.87 3.86
4594 4608 4.327680 ACTTGGTGCTATTTGAGTTCCTC 58.672 43.478 0.00 0.00 0.00 3.71
4597 4611 5.438761 ACAACTTGGTGCTATTTGAGTTC 57.561 39.130 0.00 0.00 0.00 3.01
4598 4612 5.451798 CCAACAACTTGGTGCTATTTGAGTT 60.452 40.000 0.78 0.00 42.09 3.01
4599 4613 4.037923 CCAACAACTTGGTGCTATTTGAGT 59.962 41.667 0.78 0.00 42.09 3.41
4600 4614 4.278170 TCCAACAACTTGGTGCTATTTGAG 59.722 41.667 0.78 0.00 46.56 3.02
4601 4615 4.211125 TCCAACAACTTGGTGCTATTTGA 58.789 39.130 0.78 0.00 46.56 2.69
4602 4616 4.582701 TCCAACAACTTGGTGCTATTTG 57.417 40.909 0.78 0.00 46.56 2.32
4603 4617 5.539955 AGATTCCAACAACTTGGTGCTATTT 59.460 36.000 0.78 0.00 46.56 1.40
4604 4618 5.047802 CAGATTCCAACAACTTGGTGCTATT 60.048 40.000 0.78 0.00 46.56 1.73
4606 4620 3.820467 CAGATTCCAACAACTTGGTGCTA 59.180 43.478 0.78 0.00 46.56 3.49
4607 4621 2.624838 CAGATTCCAACAACTTGGTGCT 59.375 45.455 0.78 0.00 46.56 4.40
4608 4622 2.362077 ACAGATTCCAACAACTTGGTGC 59.638 45.455 0.78 0.00 46.56 5.01
4609 4623 4.097741 TGAACAGATTCCAACAACTTGGTG 59.902 41.667 0.00 0.00 46.56 4.17
4610 4624 4.277476 TGAACAGATTCCAACAACTTGGT 58.723 39.130 0.00 0.00 46.56 3.67
4612 4626 4.293415 GCTGAACAGATTCCAACAACTTG 58.707 43.478 5.97 0.00 33.49 3.16
4613 4627 3.319122 GGCTGAACAGATTCCAACAACTT 59.681 43.478 5.97 0.00 33.49 2.66
4614 4628 2.887152 GGCTGAACAGATTCCAACAACT 59.113 45.455 5.97 0.00 33.49 3.16
4615 4629 2.887152 AGGCTGAACAGATTCCAACAAC 59.113 45.455 5.97 0.00 33.49 3.32
4618 4632 2.227388 CACAGGCTGAACAGATTCCAAC 59.773 50.000 23.66 0.00 33.49 3.77
4619 4633 2.158623 ACACAGGCTGAACAGATTCCAA 60.159 45.455 23.66 0.00 33.49 3.53
4622 4636 1.198637 GCACACAGGCTGAACAGATTC 59.801 52.381 23.66 0.00 35.18 2.52
4623 4637 1.202855 AGCACACAGGCTGAACAGATT 60.203 47.619 23.66 0.00 43.89 2.40
4624 4638 0.399454 AGCACACAGGCTGAACAGAT 59.601 50.000 23.66 3.67 43.89 2.90
4625 4639 1.001293 CTAGCACACAGGCTGAACAGA 59.999 52.381 23.66 0.56 45.44 3.41
4626 4640 1.436600 CTAGCACACAGGCTGAACAG 58.563 55.000 23.66 10.24 45.44 3.16
4627 4641 0.035317 CCTAGCACACAGGCTGAACA 59.965 55.000 23.66 0.00 45.44 3.18
4628 4642 0.321671 TCCTAGCACACAGGCTGAAC 59.678 55.000 23.66 7.10 45.44 3.18
4629 4643 0.321671 GTCCTAGCACACAGGCTGAA 59.678 55.000 23.66 0.00 45.44 3.02
4630 4644 0.542938 AGTCCTAGCACACAGGCTGA 60.543 55.000 23.66 0.00 45.44 4.26
4631 4645 0.108424 GAGTCCTAGCACACAGGCTG 60.108 60.000 14.16 14.16 45.44 4.85
4635 4649 0.881796 TCACGAGTCCTAGCACACAG 59.118 55.000 0.00 0.00 0.00 3.66
4637 4651 0.596577 TGTCACGAGTCCTAGCACAC 59.403 55.000 0.00 0.00 0.00 3.82
4638 4652 0.881796 CTGTCACGAGTCCTAGCACA 59.118 55.000 0.00 0.00 0.00 4.57
4640 4654 0.881796 CACTGTCACGAGTCCTAGCA 59.118 55.000 0.00 0.00 0.00 3.49
4641 4655 0.171455 CCACTGTCACGAGTCCTAGC 59.829 60.000 0.00 0.00 0.00 3.42
4643 4657 1.611977 CAACCACTGTCACGAGTCCTA 59.388 52.381 0.00 0.00 0.00 2.94
4644 4658 0.389391 CAACCACTGTCACGAGTCCT 59.611 55.000 0.00 0.00 0.00 3.85
4645 4659 0.387929 TCAACCACTGTCACGAGTCC 59.612 55.000 0.00 0.00 0.00 3.85
4646 4660 1.202371 TGTCAACCACTGTCACGAGTC 60.202 52.381 0.00 0.00 0.00 3.36
4647 4661 0.821517 TGTCAACCACTGTCACGAGT 59.178 50.000 0.00 0.00 0.00 4.18
4648 4662 1.202417 ACTGTCAACCACTGTCACGAG 60.202 52.381 0.00 0.00 31.79 4.18
4649 4663 0.821517 ACTGTCAACCACTGTCACGA 59.178 50.000 0.00 0.00 31.79 4.35
4650 4664 0.930310 CACTGTCAACCACTGTCACG 59.070 55.000 0.00 0.00 35.07 4.35
4651 4665 2.024176 ACACTGTCAACCACTGTCAC 57.976 50.000 0.00 0.00 35.07 3.67
4652 4666 3.527533 GTTACACTGTCAACCACTGTCA 58.472 45.455 0.00 0.00 35.07 3.58
4653 4667 2.870411 GGTTACACTGTCAACCACTGTC 59.130 50.000 13.41 0.00 43.13 3.51
4659 4690 3.434299 CGGTTATGGTTACACTGTCAACC 59.566 47.826 11.99 11.99 43.78 3.77
4723 4755 0.612229 TTTGAGCTCCTGAGAGGCAG 59.388 55.000 12.15 0.00 44.49 4.85
4724 4756 1.065636 CATTTGAGCTCCTGAGAGGCA 60.066 52.381 12.15 0.00 40.79 4.75
4725 4757 1.666054 CATTTGAGCTCCTGAGAGGC 58.334 55.000 12.15 0.00 40.79 4.70
4726 4758 1.746516 GCCATTTGAGCTCCTGAGAGG 60.747 57.143 12.15 6.94 40.79 3.69
4727 4759 1.065636 TGCCATTTGAGCTCCTGAGAG 60.066 52.381 12.15 0.00 43.57 3.20
4728 4760 0.986527 TGCCATTTGAGCTCCTGAGA 59.013 50.000 12.15 0.00 0.00 3.27
4768 4800 2.772102 TGGCAGTACCAGTGTCCAT 58.228 52.632 0.00 0.00 46.36 3.41
4796 4828 2.943033 CTCGAAAGAACAAGTTGGTGGT 59.057 45.455 7.96 0.00 41.32 4.16
4797 4829 3.202906 TCTCGAAAGAACAAGTTGGTGG 58.797 45.455 7.96 0.00 41.32 4.61
4798 4830 4.119862 TCTCTCGAAAGAACAAGTTGGTG 58.880 43.478 7.96 0.00 41.32 4.17
4799 4831 4.402056 TCTCTCGAAAGAACAAGTTGGT 57.598 40.909 7.96 0.00 41.32 3.67
4828 4860 3.572584 CTTTCTGAATGCCAAGTTGCTC 58.427 45.455 0.00 0.00 0.00 4.26
4844 4876 0.108585 TCGAGTTTGCCTGGCTTTCT 59.891 50.000 21.03 14.13 0.00 2.52
4926 4960 1.286880 GCAATCGCAACAGCAAGGT 59.713 52.632 0.00 0.00 38.36 3.50
5015 5050 2.575993 CAGCCTGACCGGAGACTG 59.424 66.667 9.46 0.00 33.16 3.51
5161 5204 1.452651 TGCTGCTGCAGGATAAGGC 60.453 57.895 29.05 15.33 45.31 4.35
5199 5242 2.358615 TTGTTCGCGGCAGAGCAT 60.359 55.556 6.13 0.00 36.85 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.