Multiple sequence alignment - TraesCS2D01G359600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G359600 chr2D 100.000 2497 0 0 1 2497 461535880 461538376 0.000000e+00 4612.0
1 TraesCS2D01G359600 chr1D 95.262 1393 34 12 531 1891 376890124 376891516 0.000000e+00 2178.0
2 TraesCS2D01G359600 chr7B 95.608 1093 41 5 1406 2497 641172602 641173688 0.000000e+00 1746.0
3 TraesCS2D01G359600 chr7B 91.741 896 40 16 536 1400 641171760 641172652 0.000000e+00 1214.0
4 TraesCS2D01G359600 chr7B 88.318 779 69 11 1723 2497 198977317 198978077 0.000000e+00 915.0
5 TraesCS2D01G359600 chr7B 86.325 117 16 0 1408 1524 688587602 688587486 7.250000e-26 128.0
6 TraesCS2D01G359600 chr4A 93.174 879 49 5 530 1400 736224914 736225789 0.000000e+00 1280.0
7 TraesCS2D01G359600 chr4A 94.465 813 31 3 1406 2217 736225739 736226538 0.000000e+00 1240.0
8 TraesCS2D01G359600 chr4A 95.035 282 8 4 2217 2497 736231544 736231820 2.950000e-119 438.0
9 TraesCS2D01G359600 chr5B 89.589 778 58 11 1723 2497 475689796 475690553 0.000000e+00 966.0
10 TraesCS2D01G359600 chr4B 88.447 779 68 11 1723 2497 220282088 220281328 0.000000e+00 920.0
11 TraesCS2D01G359600 chr4B 78.807 486 74 20 605 1070 88850446 88849970 1.450000e-77 300.0
12 TraesCS2D01G359600 chr4B 88.125 160 14 3 1242 1401 409750428 409750274 4.240000e-43 185.0
13 TraesCS2D01G359600 chr4B 90.000 110 11 0 1475 1584 409750278 409750169 2.590000e-30 143.0
14 TraesCS2D01G359600 chr6B 88.447 779 63 12 1723 2497 624701057 624700302 0.000000e+00 915.0
15 TraesCS2D01G359600 chr6B 87.035 779 74 14 1723 2497 132051908 132051153 0.000000e+00 854.0
16 TraesCS2D01G359600 chr6B 84.874 119 18 0 1406 1524 288940580 288940698 1.210000e-23 121.0
17 TraesCS2D01G359600 chr5A 93.819 453 23 3 2046 2497 325197308 325196860 0.000000e+00 676.0
18 TraesCS2D01G359600 chr5A 90.836 371 33 1 1723 2093 528603532 528603901 1.730000e-136 496.0
19 TraesCS2D01G359600 chr5D 86.023 601 47 15 1723 2320 395263489 395264055 5.900000e-171 610.0
20 TraesCS2D01G359600 chr5D 86.441 59 5 3 529 586 15963688 15963744 7.460000e-06 62.1
21 TraesCS2D01G359600 chr2B 90.909 374 33 1 1723 2096 335385550 335385178 3.710000e-138 501.0
22 TraesCS2D01G359600 chr2A 90.836 371 33 1 1723 2093 733863153 733863522 1.730000e-136 496.0
23 TraesCS2D01G359600 chr2A 86.826 334 41 2 149 482 606672886 606673216 1.090000e-98 370.0
24 TraesCS2D01G359600 chr2A 85.556 180 23 2 1406 1584 21421585 21421762 4.240000e-43 185.0
25 TraesCS2D01G359600 chr2A 83.333 162 18 4 1239 1400 21421483 21421635 9.310000e-30 141.0
26 TraesCS2D01G359600 chr1B 90.836 371 33 1 1723 2093 19025014 19025383 1.730000e-136 496.0
27 TraesCS2D01G359600 chr4D 80.290 482 63 20 606 1077 381739077 381739536 3.980000e-88 335.0
28 TraesCS2D01G359600 chr4D 86.503 163 17 3 1239 1401 331631289 331631446 9.180000e-40 174.0
29 TraesCS2D01G359600 chr4D 90.909 110 10 0 1475 1584 331631442 331631551 5.560000e-32 148.0
30 TraesCS2D01G359600 chr6D 90.496 242 16 4 2256 2496 448536301 448536536 1.860000e-81 313.0
31 TraesCS2D01G359600 chr7D 75.752 499 70 24 605 1077 611166510 611166037 1.170000e-48 204.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G359600 chr2D 461535880 461538376 2496 False 4612 4612 100.0000 1 2497 1 chr2D.!!$F1 2496
1 TraesCS2D01G359600 chr1D 376890124 376891516 1392 False 2178 2178 95.2620 531 1891 1 chr1D.!!$F1 1360
2 TraesCS2D01G359600 chr7B 641171760 641173688 1928 False 1480 1746 93.6745 536 2497 2 chr7B.!!$F2 1961
3 TraesCS2D01G359600 chr7B 198977317 198978077 760 False 915 915 88.3180 1723 2497 1 chr7B.!!$F1 774
4 TraesCS2D01G359600 chr4A 736224914 736226538 1624 False 1260 1280 93.8195 530 2217 2 chr4A.!!$F2 1687
5 TraesCS2D01G359600 chr5B 475689796 475690553 757 False 966 966 89.5890 1723 2497 1 chr5B.!!$F1 774
6 TraesCS2D01G359600 chr4B 220281328 220282088 760 True 920 920 88.4470 1723 2497 1 chr4B.!!$R2 774
7 TraesCS2D01G359600 chr6B 624700302 624701057 755 True 915 915 88.4470 1723 2497 1 chr6B.!!$R2 774
8 TraesCS2D01G359600 chr6B 132051153 132051908 755 True 854 854 87.0350 1723 2497 1 chr6B.!!$R1 774
9 TraesCS2D01G359600 chr5D 395263489 395264055 566 False 610 610 86.0230 1723 2320 1 chr5D.!!$F2 597

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
94 95 0.027455 TTCACTTTGCGTCAACTGCG 59.973 50.0 0.0 0.0 34.24 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1893 1935 0.652592 GAATCGACGGGCACATCAAG 59.347 55.0 0.0 0.0 0.0 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.083746 GCTACACTTACGGACGGC 57.916 61.111 0.00 0.00 0.00 5.68
18 19 1.517913 GCTACACTTACGGACGGCC 60.518 63.158 0.00 0.00 0.00 6.13
19 20 1.885157 CTACACTTACGGACGGCCA 59.115 57.895 8.76 0.00 0.00 5.36
20 21 0.179145 CTACACTTACGGACGGCCAG 60.179 60.000 8.76 2.04 0.00 4.85
21 22 0.895100 TACACTTACGGACGGCCAGT 60.895 55.000 8.76 9.33 0.00 4.00
22 23 1.736645 CACTTACGGACGGCCAGTG 60.737 63.158 8.76 10.45 31.76 3.66
23 24 2.813908 CTTACGGACGGCCAGTGC 60.814 66.667 8.76 6.35 37.88 4.40
24 25 3.583276 CTTACGGACGGCCAGTGCA 62.583 63.158 8.76 0.00 41.69 4.57
25 26 3.869473 TTACGGACGGCCAGTGCAC 62.869 63.158 8.76 9.40 41.69 4.57
29 30 4.980805 GACGGCCAGTGCACGGAA 62.981 66.667 25.37 0.00 40.13 4.30
30 31 4.555709 ACGGCCAGTGCACGGAAA 62.556 61.111 25.37 0.00 40.13 3.13
31 32 3.283684 CGGCCAGTGCACGGAAAA 61.284 61.111 25.37 0.00 40.13 2.29
32 33 2.335011 GGCCAGTGCACGGAAAAC 59.665 61.111 25.37 11.45 40.13 2.43
33 34 2.485795 GGCCAGTGCACGGAAAACA 61.486 57.895 25.37 0.00 40.13 2.83
34 35 1.659794 GCCAGTGCACGGAAAACAT 59.340 52.632 25.37 0.00 37.47 2.71
35 36 0.664166 GCCAGTGCACGGAAAACATG 60.664 55.000 25.37 10.88 37.47 3.21
36 37 0.667993 CCAGTGCACGGAAAACATGT 59.332 50.000 19.14 0.00 0.00 3.21
37 38 1.876799 CCAGTGCACGGAAAACATGTA 59.123 47.619 19.14 0.00 0.00 2.29
38 39 2.487762 CCAGTGCACGGAAAACATGTAT 59.512 45.455 19.14 0.00 0.00 2.29
39 40 3.491356 CAGTGCACGGAAAACATGTATG 58.509 45.455 11.96 0.00 0.00 2.39
40 41 2.095263 AGTGCACGGAAAACATGTATGC 60.095 45.455 12.01 3.63 0.00 3.14
41 42 1.135831 TGCACGGAAAACATGTATGCG 60.136 47.619 19.24 19.24 34.32 4.73
42 43 1.534028 CACGGAAAACATGTATGCGC 58.466 50.000 20.30 0.00 0.00 6.09
43 44 0.096281 ACGGAAAACATGTATGCGCG 59.904 50.000 20.30 0.00 0.00 6.86
44 45 0.588730 CGGAAAACATGTATGCGCGG 60.589 55.000 8.83 0.00 0.00 6.46
45 46 0.730265 GGAAAACATGTATGCGCGGA 59.270 50.000 8.83 5.00 0.00 5.54
46 47 1.268032 GGAAAACATGTATGCGCGGAG 60.268 52.381 8.83 0.00 0.00 4.63
47 48 0.732571 AAAACATGTATGCGCGGAGG 59.267 50.000 8.83 0.00 0.00 4.30
48 49 1.095228 AAACATGTATGCGCGGAGGG 61.095 55.000 8.83 0.00 46.11 4.30
49 50 2.666190 CATGTATGCGCGGAGGGG 60.666 66.667 8.83 0.00 42.39 4.79
50 51 3.941188 ATGTATGCGCGGAGGGGG 61.941 66.667 8.83 0.00 42.39 5.40
52 53 4.301027 GTATGCGCGGAGGGGGAG 62.301 72.222 8.83 0.00 42.39 4.30
53 54 4.853142 TATGCGCGGAGGGGGAGT 62.853 66.667 8.83 0.00 42.39 3.85
59 60 3.465403 CGGAGGGGGAGTGAGCTG 61.465 72.222 0.00 0.00 0.00 4.24
60 61 2.039624 GGAGGGGGAGTGAGCTGA 59.960 66.667 0.00 0.00 0.00 4.26
61 62 1.383803 GGAGGGGGAGTGAGCTGAT 60.384 63.158 0.00 0.00 0.00 2.90
62 63 0.985490 GGAGGGGGAGTGAGCTGATT 60.985 60.000 0.00 0.00 0.00 2.57
63 64 0.179936 GAGGGGGAGTGAGCTGATTG 59.820 60.000 0.00 0.00 0.00 2.67
64 65 1.225704 GGGGGAGTGAGCTGATTGG 59.774 63.158 0.00 0.00 0.00 3.16
65 66 1.566298 GGGGGAGTGAGCTGATTGGT 61.566 60.000 0.00 0.00 0.00 3.67
66 67 0.393537 GGGGAGTGAGCTGATTGGTG 60.394 60.000 0.00 0.00 0.00 4.17
67 68 1.028868 GGGAGTGAGCTGATTGGTGC 61.029 60.000 0.00 0.00 0.00 5.01
68 69 0.035630 GGAGTGAGCTGATTGGTGCT 60.036 55.000 0.00 0.00 42.82 4.40
76 77 4.612264 AGCTGATTGGTGCTCAATTTTT 57.388 36.364 7.17 0.00 45.36 1.94
77 78 4.563061 AGCTGATTGGTGCTCAATTTTTC 58.437 39.130 7.17 0.00 45.36 2.29
78 79 4.039488 AGCTGATTGGTGCTCAATTTTTCA 59.961 37.500 7.17 2.33 45.36 2.69
79 80 4.151157 GCTGATTGGTGCTCAATTTTTCAC 59.849 41.667 7.17 0.00 45.36 3.18
80 81 5.534207 TGATTGGTGCTCAATTTTTCACT 57.466 34.783 7.17 0.00 45.36 3.41
81 82 5.916318 TGATTGGTGCTCAATTTTTCACTT 58.084 33.333 7.17 0.00 45.36 3.16
82 83 6.347696 TGATTGGTGCTCAATTTTTCACTTT 58.652 32.000 7.17 0.00 45.36 2.66
83 84 6.258287 TGATTGGTGCTCAATTTTTCACTTTG 59.742 34.615 7.17 0.00 45.36 2.77
84 85 3.870419 TGGTGCTCAATTTTTCACTTTGC 59.130 39.130 0.00 0.00 0.00 3.68
85 86 3.060339 GGTGCTCAATTTTTCACTTTGCG 60.060 43.478 0.00 0.00 0.00 4.85
86 87 3.551485 GTGCTCAATTTTTCACTTTGCGT 59.449 39.130 0.00 0.00 0.00 5.24
87 88 3.796178 TGCTCAATTTTTCACTTTGCGTC 59.204 39.130 0.00 0.00 0.00 5.19
88 89 3.796178 GCTCAATTTTTCACTTTGCGTCA 59.204 39.130 0.00 0.00 0.00 4.35
89 90 4.267452 GCTCAATTTTTCACTTTGCGTCAA 59.733 37.500 0.00 0.00 0.00 3.18
90 91 5.694674 TCAATTTTTCACTTTGCGTCAAC 57.305 34.783 0.00 0.00 0.00 3.18
91 92 5.406649 TCAATTTTTCACTTTGCGTCAACT 58.593 33.333 0.00 0.00 0.00 3.16
92 93 5.288232 TCAATTTTTCACTTTGCGTCAACTG 59.712 36.000 0.00 0.00 0.00 3.16
93 94 2.187351 TTTCACTTTGCGTCAACTGC 57.813 45.000 0.00 0.00 0.00 4.40
94 95 0.027455 TTCACTTTGCGTCAACTGCG 59.973 50.000 0.00 0.00 34.24 5.18
95 96 1.369209 CACTTTGCGTCAACTGCGG 60.369 57.895 0.00 0.00 34.24 5.69
96 97 2.427410 CTTTGCGTCAACTGCGGC 60.427 61.111 0.00 0.00 34.24 6.53
97 98 2.896801 CTTTGCGTCAACTGCGGCT 61.897 57.895 0.00 0.00 34.24 5.52
98 99 2.770587 CTTTGCGTCAACTGCGGCTC 62.771 60.000 0.00 0.00 34.24 4.70
99 100 4.600576 TGCGTCAACTGCGGCTCA 62.601 61.111 0.00 0.00 34.24 4.26
100 101 4.077188 GCGTCAACTGCGGCTCAC 62.077 66.667 0.00 0.00 0.00 3.51
101 102 2.661537 CGTCAACTGCGGCTCACA 60.662 61.111 0.00 0.00 0.00 3.58
102 103 2.029288 CGTCAACTGCGGCTCACAT 61.029 57.895 0.00 0.00 0.00 3.21
103 104 1.790387 GTCAACTGCGGCTCACATC 59.210 57.895 0.00 0.00 0.00 3.06
104 105 1.737735 TCAACTGCGGCTCACATCG 60.738 57.895 0.00 0.00 0.00 3.84
110 111 2.491621 CGGCTCACATCGCTCTCA 59.508 61.111 0.00 0.00 0.00 3.27
111 112 1.067084 CGGCTCACATCGCTCTCAT 59.933 57.895 0.00 0.00 0.00 2.90
112 113 0.529337 CGGCTCACATCGCTCTCATT 60.529 55.000 0.00 0.00 0.00 2.57
113 114 1.216122 GGCTCACATCGCTCTCATTC 58.784 55.000 0.00 0.00 0.00 2.67
114 115 1.202510 GGCTCACATCGCTCTCATTCT 60.203 52.381 0.00 0.00 0.00 2.40
115 116 1.859703 GCTCACATCGCTCTCATTCTG 59.140 52.381 0.00 0.00 0.00 3.02
116 117 1.859703 CTCACATCGCTCTCATTCTGC 59.140 52.381 0.00 0.00 0.00 4.26
117 118 0.935898 CACATCGCTCTCATTCTGCC 59.064 55.000 0.00 0.00 0.00 4.85
118 119 0.538584 ACATCGCTCTCATTCTGCCA 59.461 50.000 0.00 0.00 0.00 4.92
119 120 0.935898 CATCGCTCTCATTCTGCCAC 59.064 55.000 0.00 0.00 0.00 5.01
120 121 0.538584 ATCGCTCTCATTCTGCCACA 59.461 50.000 0.00 0.00 0.00 4.17
121 122 0.538584 TCGCTCTCATTCTGCCACAT 59.461 50.000 0.00 0.00 0.00 3.21
122 123 0.935898 CGCTCTCATTCTGCCACATC 59.064 55.000 0.00 0.00 0.00 3.06
123 124 1.741394 CGCTCTCATTCTGCCACATCA 60.741 52.381 0.00 0.00 0.00 3.07
124 125 1.941294 GCTCTCATTCTGCCACATCAG 59.059 52.381 0.00 0.00 35.46 2.90
125 126 2.680221 GCTCTCATTCTGCCACATCAGT 60.680 50.000 0.00 0.00 35.63 3.41
126 127 2.937149 CTCTCATTCTGCCACATCAGTG 59.063 50.000 0.00 0.00 45.47 3.66
127 128 1.400846 CTCATTCTGCCACATCAGTGC 59.599 52.381 0.00 0.00 44.53 4.40
128 129 0.098200 CATTCTGCCACATCAGTGCG 59.902 55.000 0.00 0.00 44.53 5.34
129 130 0.321919 ATTCTGCCACATCAGTGCGT 60.322 50.000 0.00 0.00 44.53 5.24
130 131 0.320050 TTCTGCCACATCAGTGCGTA 59.680 50.000 0.00 0.00 44.53 4.42
131 132 0.108662 TCTGCCACATCAGTGCGTAG 60.109 55.000 0.00 0.00 44.53 3.51
146 147 2.442189 CGTAGCCAGCTTCATTTTCG 57.558 50.000 0.00 0.00 0.00 3.46
147 148 1.529826 CGTAGCCAGCTTCATTTTCGC 60.530 52.381 0.00 0.00 0.00 4.70
148 149 1.740025 GTAGCCAGCTTCATTTTCGCT 59.260 47.619 0.00 0.00 0.00 4.93
157 158 6.057627 AGCTTCATTTTCGCTGATAGAATG 57.942 37.500 0.00 0.00 31.82 2.67
158 159 5.819379 AGCTTCATTTTCGCTGATAGAATGA 59.181 36.000 0.00 0.00 35.57 2.57
159 160 6.018098 AGCTTCATTTTCGCTGATAGAATGAG 60.018 38.462 0.00 0.00 37.82 2.90
160 161 6.238320 GCTTCATTTTCGCTGATAGAATGAGT 60.238 38.462 0.00 0.00 37.82 3.41
161 162 6.594284 TCATTTTCGCTGATAGAATGAGTG 57.406 37.500 0.00 0.00 33.26 3.51
162 163 6.108687 TCATTTTCGCTGATAGAATGAGTGT 58.891 36.000 0.00 0.00 33.26 3.55
163 164 6.256539 TCATTTTCGCTGATAGAATGAGTGTC 59.743 38.462 0.00 0.00 33.26 3.67
164 165 4.991153 TTCGCTGATAGAATGAGTGTCT 57.009 40.909 0.00 0.00 0.00 3.41
165 166 6.451064 TTTCGCTGATAGAATGAGTGTCTA 57.549 37.500 0.00 0.00 32.28 2.59
166 167 5.681337 TCGCTGATAGAATGAGTGTCTAG 57.319 43.478 0.00 0.00 31.27 2.43
167 168 5.126779 TCGCTGATAGAATGAGTGTCTAGT 58.873 41.667 0.00 0.00 31.27 2.57
168 169 6.289064 TCGCTGATAGAATGAGTGTCTAGTA 58.711 40.000 0.00 0.00 31.27 1.82
169 170 6.937465 TCGCTGATAGAATGAGTGTCTAGTAT 59.063 38.462 0.00 0.00 31.27 2.12
170 171 7.020602 CGCTGATAGAATGAGTGTCTAGTATG 58.979 42.308 0.00 0.00 31.27 2.39
171 172 7.308288 CGCTGATAGAATGAGTGTCTAGTATGT 60.308 40.741 0.00 0.00 31.27 2.29
172 173 7.807433 GCTGATAGAATGAGTGTCTAGTATGTG 59.193 40.741 0.00 0.00 31.27 3.21
173 174 8.753497 TGATAGAATGAGTGTCTAGTATGTGT 57.247 34.615 0.00 0.00 31.27 3.72
174 175 9.847224 TGATAGAATGAGTGTCTAGTATGTGTA 57.153 33.333 0.00 0.00 31.27 2.90
177 178 8.753497 AGAATGAGTGTCTAGTATGTGTATGA 57.247 34.615 0.00 0.00 0.00 2.15
178 179 8.845227 AGAATGAGTGTCTAGTATGTGTATGAG 58.155 37.037 0.00 0.00 0.00 2.90
179 180 8.753497 AATGAGTGTCTAGTATGTGTATGAGA 57.247 34.615 0.00 0.00 0.00 3.27
180 181 7.555306 TGAGTGTCTAGTATGTGTATGAGAC 57.445 40.000 0.00 0.00 35.07 3.36
181 182 7.339482 TGAGTGTCTAGTATGTGTATGAGACT 58.661 38.462 0.00 0.00 35.44 3.24
182 183 8.483758 TGAGTGTCTAGTATGTGTATGAGACTA 58.516 37.037 0.00 0.00 35.44 2.59
183 184 8.665643 AGTGTCTAGTATGTGTATGAGACTAC 57.334 38.462 0.00 0.00 35.44 2.73
184 185 8.265764 AGTGTCTAGTATGTGTATGAGACTACA 58.734 37.037 0.00 0.00 35.44 2.74
185 186 8.890718 GTGTCTAGTATGTGTATGAGACTACAA 58.109 37.037 0.00 0.00 35.44 2.41
186 187 9.628500 TGTCTAGTATGTGTATGAGACTACAAT 57.372 33.333 0.00 0.00 35.44 2.71
189 190 9.684448 CTAGTATGTGTATGAGACTACAATTGG 57.316 37.037 10.83 0.00 33.59 3.16
190 191 8.306313 AGTATGTGTATGAGACTACAATTGGA 57.694 34.615 10.83 0.00 33.59 3.53
191 192 8.198109 AGTATGTGTATGAGACTACAATTGGAC 58.802 37.037 10.83 0.00 33.59 4.02
192 193 6.605471 TGTGTATGAGACTACAATTGGACT 57.395 37.500 10.83 3.24 33.59 3.85
193 194 7.004555 TGTGTATGAGACTACAATTGGACTT 57.995 36.000 10.83 0.00 33.59 3.01
194 195 6.873605 TGTGTATGAGACTACAATTGGACTTG 59.126 38.462 10.83 0.00 33.59 3.16
195 196 6.313905 GTGTATGAGACTACAATTGGACTTGG 59.686 42.308 10.83 0.00 33.59 3.61
196 197 5.762179 ATGAGACTACAATTGGACTTGGA 57.238 39.130 10.83 0.00 0.00 3.53
197 198 5.560722 TGAGACTACAATTGGACTTGGAA 57.439 39.130 10.83 0.00 0.00 3.53
198 199 6.126863 TGAGACTACAATTGGACTTGGAAT 57.873 37.500 10.83 0.00 0.00 3.01
199 200 7.252612 TGAGACTACAATTGGACTTGGAATA 57.747 36.000 10.83 0.00 0.00 1.75
200 201 7.861629 TGAGACTACAATTGGACTTGGAATAT 58.138 34.615 10.83 0.00 0.00 1.28
201 202 7.770433 TGAGACTACAATTGGACTTGGAATATG 59.230 37.037 10.83 0.00 0.00 1.78
202 203 6.543831 AGACTACAATTGGACTTGGAATATGC 59.456 38.462 10.83 0.00 0.00 3.14
203 204 4.637483 ACAATTGGACTTGGAATATGCG 57.363 40.909 10.83 0.00 0.00 4.73
204 205 4.016444 ACAATTGGACTTGGAATATGCGT 58.984 39.130 10.83 0.00 0.00 5.24
205 206 5.189928 ACAATTGGACTTGGAATATGCGTA 58.810 37.500 10.83 0.00 0.00 4.42
206 207 5.650266 ACAATTGGACTTGGAATATGCGTAA 59.350 36.000 10.83 0.00 0.00 3.18
207 208 6.183360 ACAATTGGACTTGGAATATGCGTAAG 60.183 38.462 10.83 0.00 43.44 2.34
208 209 3.804036 TGGACTTGGAATATGCGTAAGG 58.196 45.455 0.00 0.00 38.28 2.69
209 210 3.199071 TGGACTTGGAATATGCGTAAGGT 59.801 43.478 0.00 0.00 38.28 3.50
210 211 3.560068 GGACTTGGAATATGCGTAAGGTG 59.440 47.826 0.00 0.00 38.28 4.00
211 212 3.541632 ACTTGGAATATGCGTAAGGTGG 58.458 45.455 0.00 0.00 38.28 4.61
212 213 2.631160 TGGAATATGCGTAAGGTGGG 57.369 50.000 0.00 0.00 38.28 4.61
213 214 1.142060 TGGAATATGCGTAAGGTGGGG 59.858 52.381 0.00 0.00 38.28 4.96
214 215 1.142262 GGAATATGCGTAAGGTGGGGT 59.858 52.381 0.00 0.00 38.28 4.95
215 216 2.218603 GAATATGCGTAAGGTGGGGTG 58.781 52.381 0.00 0.00 38.28 4.61
216 217 1.502690 ATATGCGTAAGGTGGGGTGA 58.497 50.000 0.00 0.00 38.28 4.02
217 218 1.502690 TATGCGTAAGGTGGGGTGAT 58.497 50.000 0.00 0.00 38.28 3.06
218 219 0.107214 ATGCGTAAGGTGGGGTGATG 60.107 55.000 0.00 0.00 38.28 3.07
219 220 1.451387 GCGTAAGGTGGGGTGATGG 60.451 63.158 0.00 0.00 38.28 3.51
220 221 1.906105 GCGTAAGGTGGGGTGATGGA 61.906 60.000 0.00 0.00 38.28 3.41
221 222 0.178068 CGTAAGGTGGGGTGATGGAG 59.822 60.000 0.00 0.00 0.00 3.86
222 223 1.286248 GTAAGGTGGGGTGATGGAGT 58.714 55.000 0.00 0.00 0.00 3.85
223 224 1.209747 GTAAGGTGGGGTGATGGAGTC 59.790 57.143 0.00 0.00 0.00 3.36
224 225 1.553690 AAGGTGGGGTGATGGAGTCG 61.554 60.000 0.00 0.00 0.00 4.18
225 226 1.987855 GGTGGGGTGATGGAGTCGA 60.988 63.158 0.00 0.00 0.00 4.20
226 227 1.550130 GGTGGGGTGATGGAGTCGAA 61.550 60.000 0.00 0.00 0.00 3.71
227 228 0.391263 GTGGGGTGATGGAGTCGAAC 60.391 60.000 0.00 0.00 0.00 3.95
228 229 1.153628 GGGGTGATGGAGTCGAACG 60.154 63.158 0.00 0.00 0.00 3.95
229 230 1.810030 GGGTGATGGAGTCGAACGC 60.810 63.158 0.00 0.00 0.00 4.84
230 231 2.158959 GGTGATGGAGTCGAACGCG 61.159 63.158 3.53 3.53 39.35 6.01
231 232 2.158959 GTGATGGAGTCGAACGCGG 61.159 63.158 12.47 0.00 38.28 6.46
232 233 2.582498 GATGGAGTCGAACGCGGG 60.582 66.667 12.47 0.00 38.28 6.13
233 234 3.352338 GATGGAGTCGAACGCGGGT 62.352 63.158 12.47 0.00 38.28 5.28
234 235 3.642778 ATGGAGTCGAACGCGGGTG 62.643 63.158 12.47 0.00 38.28 4.61
235 236 4.047059 GGAGTCGAACGCGGGTGA 62.047 66.667 12.47 0.88 38.28 4.02
236 237 2.049802 GAGTCGAACGCGGGTGAA 60.050 61.111 12.47 0.00 38.28 3.18
237 238 1.662446 GAGTCGAACGCGGGTGAAA 60.662 57.895 12.47 0.00 38.28 2.69
238 239 1.883725 GAGTCGAACGCGGGTGAAAC 61.884 60.000 12.47 4.67 38.28 2.78
262 263 8.918202 ACCAAAACTAATAGATGAAAGACACA 57.082 30.769 0.00 0.00 0.00 3.72
263 264 9.349713 ACCAAAACTAATAGATGAAAGACACAA 57.650 29.630 0.00 0.00 0.00 3.33
264 265 9.612620 CCAAAACTAATAGATGAAAGACACAAC 57.387 33.333 0.00 0.00 0.00 3.32
265 266 9.318041 CAAAACTAATAGATGAAAGACACAACG 57.682 33.333 0.00 0.00 0.00 4.10
266 267 7.596749 AACTAATAGATGAAAGACACAACGG 57.403 36.000 0.00 0.00 0.00 4.44
267 268 4.946784 AATAGATGAAAGACACAACGGC 57.053 40.909 0.00 0.00 0.00 5.68
268 269 2.550830 AGATGAAAGACACAACGGCT 57.449 45.000 0.00 0.00 0.00 5.52
269 270 3.678056 AGATGAAAGACACAACGGCTA 57.322 42.857 0.00 0.00 0.00 3.93
270 271 4.002906 AGATGAAAGACACAACGGCTAA 57.997 40.909 0.00 0.00 0.00 3.09
271 272 3.746492 AGATGAAAGACACAACGGCTAAC 59.254 43.478 0.00 0.00 0.00 2.34
272 273 2.215196 TGAAAGACACAACGGCTAACC 58.785 47.619 0.00 0.00 0.00 2.85
273 274 2.215196 GAAAGACACAACGGCTAACCA 58.785 47.619 0.00 0.00 34.57 3.67
274 275 2.335316 AAGACACAACGGCTAACCAA 57.665 45.000 0.00 0.00 34.57 3.67
275 276 2.335316 AGACACAACGGCTAACCAAA 57.665 45.000 0.00 0.00 34.57 3.28
276 277 2.645802 AGACACAACGGCTAACCAAAA 58.354 42.857 0.00 0.00 34.57 2.44
277 278 3.018149 AGACACAACGGCTAACCAAAAA 58.982 40.909 0.00 0.00 34.57 1.94
278 279 3.634910 AGACACAACGGCTAACCAAAAAT 59.365 39.130 0.00 0.00 34.57 1.82
279 280 4.822896 AGACACAACGGCTAACCAAAAATA 59.177 37.500 0.00 0.00 34.57 1.40
280 281 5.048991 AGACACAACGGCTAACCAAAAATAG 60.049 40.000 0.00 0.00 34.57 1.73
281 282 4.822896 ACACAACGGCTAACCAAAAATAGA 59.177 37.500 0.00 0.00 34.57 1.98
282 283 5.151389 CACAACGGCTAACCAAAAATAGAC 58.849 41.667 0.00 0.00 34.57 2.59
283 284 5.048991 CACAACGGCTAACCAAAAATAGACT 60.049 40.000 0.00 0.00 34.57 3.24
284 285 6.148150 CACAACGGCTAACCAAAAATAGACTA 59.852 38.462 0.00 0.00 34.57 2.59
285 286 6.882678 ACAACGGCTAACCAAAAATAGACTAT 59.117 34.615 0.00 0.00 34.57 2.12
286 287 8.042515 ACAACGGCTAACCAAAAATAGACTATA 58.957 33.333 0.00 0.00 34.57 1.31
287 288 8.333186 CAACGGCTAACCAAAAATAGACTATAC 58.667 37.037 0.00 0.00 34.57 1.47
288 289 7.558604 ACGGCTAACCAAAAATAGACTATACA 58.441 34.615 0.00 0.00 34.57 2.29
289 290 8.042515 ACGGCTAACCAAAAATAGACTATACAA 58.957 33.333 0.00 0.00 34.57 2.41
290 291 8.885722 CGGCTAACCAAAAATAGACTATACAAA 58.114 33.333 0.00 0.00 34.57 2.83
291 292 9.999009 GGCTAACCAAAAATAGACTATACAAAC 57.001 33.333 0.00 0.00 35.26 2.93
305 306 9.471702 AGACTATACAAACTAGTAGGCTAAACA 57.528 33.333 0.00 0.00 30.91 2.83
310 311 7.241042 ACAAACTAGTAGGCTAAACATGAGA 57.759 36.000 0.00 0.00 0.00 3.27
311 312 7.676947 ACAAACTAGTAGGCTAAACATGAGAA 58.323 34.615 0.00 0.00 0.00 2.87
312 313 8.322091 ACAAACTAGTAGGCTAAACATGAGAAT 58.678 33.333 0.00 0.00 0.00 2.40
313 314 9.817809 CAAACTAGTAGGCTAAACATGAGAATA 57.182 33.333 0.00 0.00 0.00 1.75
316 317 8.643324 ACTAGTAGGCTAAACATGAGAATAAGG 58.357 37.037 0.00 0.00 0.00 2.69
317 318 7.676683 AGTAGGCTAAACATGAGAATAAGGA 57.323 36.000 0.00 0.00 0.00 3.36
318 319 8.090788 AGTAGGCTAAACATGAGAATAAGGAA 57.909 34.615 0.00 0.00 0.00 3.36
319 320 8.207545 AGTAGGCTAAACATGAGAATAAGGAAG 58.792 37.037 0.00 0.00 0.00 3.46
320 321 7.200434 AGGCTAAACATGAGAATAAGGAAGA 57.800 36.000 0.00 0.00 0.00 2.87
321 322 7.633789 AGGCTAAACATGAGAATAAGGAAGAA 58.366 34.615 0.00 0.00 0.00 2.52
322 323 7.772757 AGGCTAAACATGAGAATAAGGAAGAAG 59.227 37.037 0.00 0.00 0.00 2.85
323 324 7.770897 GGCTAAACATGAGAATAAGGAAGAAGA 59.229 37.037 0.00 0.00 0.00 2.87
324 325 8.608317 GCTAAACATGAGAATAAGGAAGAAGAC 58.392 37.037 0.00 0.00 0.00 3.01
325 326 9.658799 CTAAACATGAGAATAAGGAAGAAGACA 57.341 33.333 0.00 0.00 0.00 3.41
326 327 7.913674 AACATGAGAATAAGGAAGAAGACAC 57.086 36.000 0.00 0.00 0.00 3.67
327 328 7.251321 ACATGAGAATAAGGAAGAAGACACT 57.749 36.000 0.00 0.00 0.00 3.55
328 329 7.684529 ACATGAGAATAAGGAAGAAGACACTT 58.315 34.615 0.00 0.00 0.00 3.16
329 330 8.160106 ACATGAGAATAAGGAAGAAGACACTTT 58.840 33.333 0.00 0.00 0.00 2.66
330 331 8.663911 CATGAGAATAAGGAAGAAGACACTTTC 58.336 37.037 0.00 0.00 0.00 2.62
331 332 6.868864 TGAGAATAAGGAAGAAGACACTTTCG 59.131 38.462 0.00 0.00 31.29 3.46
332 333 6.994221 AGAATAAGGAAGAAGACACTTTCGA 58.006 36.000 0.00 0.00 31.29 3.71
333 334 6.869388 AGAATAAGGAAGAAGACACTTTCGAC 59.131 38.462 0.00 0.00 31.29 4.20
334 335 3.014604 AGGAAGAAGACACTTTCGACG 57.985 47.619 0.00 0.00 31.29 5.12
335 336 1.456165 GGAAGAAGACACTTTCGACGC 59.544 52.381 0.00 0.00 32.33 5.19
336 337 1.456165 GAAGAAGACACTTTCGACGCC 59.544 52.381 0.00 0.00 32.33 5.68
337 338 0.319641 AGAAGACACTTTCGACGCCC 60.320 55.000 0.00 0.00 32.33 6.13
338 339 0.599204 GAAGACACTTTCGACGCCCA 60.599 55.000 0.00 0.00 0.00 5.36
339 340 0.034896 AAGACACTTTCGACGCCCAT 59.965 50.000 0.00 0.00 0.00 4.00
340 341 0.670546 AGACACTTTCGACGCCCATG 60.671 55.000 0.00 0.00 0.00 3.66
341 342 1.635663 GACACTTTCGACGCCCATGG 61.636 60.000 4.14 4.14 0.00 3.66
342 343 2.746277 ACTTTCGACGCCCATGGC 60.746 61.111 6.09 0.58 46.75 4.40
355 356 4.078167 ATGGCTGAGGCATGAGGA 57.922 55.556 21.37 0.00 46.89 3.71
356 357 1.530771 ATGGCTGAGGCATGAGGAC 59.469 57.895 21.37 0.00 46.89 3.85
357 358 0.987081 ATGGCTGAGGCATGAGGACT 60.987 55.000 21.37 0.00 46.89 3.85
358 359 1.203441 TGGCTGAGGCATGAGGACTT 61.203 55.000 3.93 0.00 40.87 3.01
359 360 0.463474 GGCTGAGGCATGAGGACTTC 60.463 60.000 0.00 0.00 40.87 3.01
360 361 0.251354 GCTGAGGCATGAGGACTTCA 59.749 55.000 0.00 0.00 40.85 3.02
361 362 2.011046 GCTGAGGCATGAGGACTTCAC 61.011 57.143 0.00 0.00 38.99 3.18
362 363 1.277273 CTGAGGCATGAGGACTTCACA 59.723 52.381 0.00 0.00 38.99 3.58
363 364 1.699083 TGAGGCATGAGGACTTCACAA 59.301 47.619 0.00 0.00 38.99 3.33
364 365 2.289882 TGAGGCATGAGGACTTCACAAG 60.290 50.000 0.00 0.00 38.99 3.16
365 366 0.807496 GGCATGAGGACTTCACAAGC 59.193 55.000 0.00 0.00 38.99 4.01
366 367 1.612726 GGCATGAGGACTTCACAAGCT 60.613 52.381 0.00 0.00 38.99 3.74
367 368 2.157738 GCATGAGGACTTCACAAGCTT 58.842 47.619 0.00 0.00 38.99 3.74
368 369 2.555757 GCATGAGGACTTCACAAGCTTT 59.444 45.455 0.00 0.00 38.99 3.51
369 370 3.611057 GCATGAGGACTTCACAAGCTTTG 60.611 47.826 0.00 0.00 38.99 2.77
370 371 3.281727 TGAGGACTTCACAAGCTTTGT 57.718 42.857 0.00 0.00 46.75 2.83
371 372 4.415881 TGAGGACTTCACAAGCTTTGTA 57.584 40.909 0.00 0.00 43.23 2.41
372 373 4.973168 TGAGGACTTCACAAGCTTTGTAT 58.027 39.130 0.00 0.00 43.23 2.29
373 374 5.376625 TGAGGACTTCACAAGCTTTGTATT 58.623 37.500 0.00 0.00 43.23 1.89
374 375 5.827797 TGAGGACTTCACAAGCTTTGTATTT 59.172 36.000 0.00 0.00 43.23 1.40
375 376 6.076981 AGGACTTCACAAGCTTTGTATTTG 57.923 37.500 0.00 0.00 43.23 2.32
376 377 5.594317 AGGACTTCACAAGCTTTGTATTTGT 59.406 36.000 0.00 0.00 43.23 2.83
377 378 5.915196 GGACTTCACAAGCTTTGTATTTGTC 59.085 40.000 0.00 0.00 43.23 3.18
378 379 5.510671 ACTTCACAAGCTTTGTATTTGTCG 58.489 37.500 0.00 0.00 43.23 4.35
379 380 5.065988 ACTTCACAAGCTTTGTATTTGTCGT 59.934 36.000 0.00 0.00 43.23 4.34
380 381 5.493133 TCACAAGCTTTGTATTTGTCGTT 57.507 34.783 0.00 0.00 43.23 3.85
381 382 5.270083 TCACAAGCTTTGTATTTGTCGTTG 58.730 37.500 0.00 0.00 43.23 4.10
382 383 5.034152 CACAAGCTTTGTATTTGTCGTTGT 58.966 37.500 0.00 0.00 43.23 3.32
383 384 6.037281 TCACAAGCTTTGTATTTGTCGTTGTA 59.963 34.615 0.00 0.00 43.23 2.41
384 385 6.140108 CACAAGCTTTGTATTTGTCGTTGTAC 59.860 38.462 0.00 0.00 43.23 2.90
385 386 5.352643 AGCTTTGTATTTGTCGTTGTACC 57.647 39.130 0.00 0.00 0.00 3.34
386 387 4.817464 AGCTTTGTATTTGTCGTTGTACCA 59.183 37.500 0.00 0.00 0.00 3.25
387 388 5.472137 AGCTTTGTATTTGTCGTTGTACCAT 59.528 36.000 0.00 0.00 0.00 3.55
388 389 5.567534 GCTTTGTATTTGTCGTTGTACCATG 59.432 40.000 0.00 0.00 0.00 3.66
389 390 6.621316 TTTGTATTTGTCGTTGTACCATGT 57.379 33.333 0.00 0.00 0.00 3.21
390 391 6.621316 TTGTATTTGTCGTTGTACCATGTT 57.379 33.333 0.00 0.00 0.00 2.71
391 392 5.991568 TGTATTTGTCGTTGTACCATGTTG 58.008 37.500 0.00 0.00 0.00 3.33
392 393 5.758784 TGTATTTGTCGTTGTACCATGTTGA 59.241 36.000 0.00 0.00 0.00 3.18
393 394 5.957842 ATTTGTCGTTGTACCATGTTGAT 57.042 34.783 0.00 0.00 0.00 2.57
394 395 5.759506 TTTGTCGTTGTACCATGTTGATT 57.240 34.783 0.00 0.00 0.00 2.57
395 396 5.759506 TTGTCGTTGTACCATGTTGATTT 57.240 34.783 0.00 0.00 0.00 2.17
396 397 6.862711 TTGTCGTTGTACCATGTTGATTTA 57.137 33.333 0.00 0.00 0.00 1.40
397 398 6.474819 TGTCGTTGTACCATGTTGATTTAG 57.525 37.500 0.00 0.00 0.00 1.85
398 399 5.992829 TGTCGTTGTACCATGTTGATTTAGT 59.007 36.000 0.00 0.00 0.00 2.24
399 400 6.073494 TGTCGTTGTACCATGTTGATTTAGTG 60.073 38.462 0.00 0.00 0.00 2.74
400 401 5.086058 CGTTGTACCATGTTGATTTAGTGC 58.914 41.667 0.00 0.00 0.00 4.40
401 402 5.334491 CGTTGTACCATGTTGATTTAGTGCA 60.334 40.000 0.00 0.00 0.00 4.57
402 403 5.621197 TGTACCATGTTGATTTAGTGCAC 57.379 39.130 9.40 9.40 0.00 4.57
403 404 5.066593 TGTACCATGTTGATTTAGTGCACA 58.933 37.500 21.04 1.84 0.00 4.57
404 405 5.532779 TGTACCATGTTGATTTAGTGCACAA 59.467 36.000 21.04 5.76 0.00 3.33
405 406 5.125100 ACCATGTTGATTTAGTGCACAAG 57.875 39.130 21.04 0.00 0.00 3.16
406 407 4.022068 ACCATGTTGATTTAGTGCACAAGG 60.022 41.667 21.04 3.73 0.00 3.61
407 408 3.641437 TGTTGATTTAGTGCACAAGGC 57.359 42.857 21.04 4.73 45.13 4.35
421 422 5.954296 GCACAAGGCATCTGTAATCATAT 57.046 39.130 0.00 0.00 43.97 1.78
423 424 7.621428 GCACAAGGCATCTGTAATCATATAT 57.379 36.000 0.00 0.00 43.97 0.86
424 425 7.470079 GCACAAGGCATCTGTAATCATATATG 58.530 38.462 6.36 6.36 43.97 1.78
425 426 7.120285 GCACAAGGCATCTGTAATCATATATGT 59.880 37.037 12.42 0.00 43.97 2.29
426 427 9.657419 CACAAGGCATCTGTAATCATATATGTA 57.343 33.333 12.42 0.49 0.00 2.29
427 428 9.881649 ACAAGGCATCTGTAATCATATATGTAG 57.118 33.333 12.42 5.34 0.00 2.74
428 429 9.881649 CAAGGCATCTGTAATCATATATGTAGT 57.118 33.333 12.42 2.19 0.00 2.73
430 431 9.881649 AGGCATCTGTAATCATATATGTAGTTG 57.118 33.333 12.42 9.92 0.00 3.16
431 432 9.658799 GGCATCTGTAATCATATATGTAGTTGT 57.341 33.333 12.42 0.00 0.00 3.32
443 444 9.427127 CATATATGTAGTTGTAGATGTCGATCG 57.573 37.037 9.36 9.36 33.34 3.69
444 445 7.668525 ATATGTAGTTGTAGATGTCGATCGA 57.331 36.000 15.15 15.15 33.34 3.59
445 446 6.561737 ATGTAGTTGTAGATGTCGATCGAT 57.438 37.500 22.50 5.91 33.34 3.59
446 447 5.748592 TGTAGTTGTAGATGTCGATCGATG 58.251 41.667 22.50 0.00 33.34 3.84
447 448 5.526111 TGTAGTTGTAGATGTCGATCGATGA 59.474 40.000 22.50 11.64 33.34 2.92
448 449 5.500645 AGTTGTAGATGTCGATCGATGAA 57.499 39.130 22.50 10.71 33.34 2.57
449 450 5.274718 AGTTGTAGATGTCGATCGATGAAC 58.725 41.667 22.50 14.93 33.34 3.18
450 451 5.066634 AGTTGTAGATGTCGATCGATGAACT 59.933 40.000 22.50 18.65 33.34 3.01
451 452 5.500645 TGTAGATGTCGATCGATGAACTT 57.499 39.130 22.50 6.93 33.34 2.66
452 453 5.511571 TGTAGATGTCGATCGATGAACTTC 58.488 41.667 22.50 15.27 33.34 3.01
453 454 4.639135 AGATGTCGATCGATGAACTTCA 57.361 40.909 22.50 12.77 33.34 3.02
454 455 5.193663 AGATGTCGATCGATGAACTTCAT 57.806 39.130 22.50 17.02 40.34 2.57
455 456 5.595885 AGATGTCGATCGATGAACTTCATT 58.404 37.500 22.50 6.35 37.20 2.57
456 457 6.739112 AGATGTCGATCGATGAACTTCATTA 58.261 36.000 22.50 0.00 37.20 1.90
457 458 7.203218 AGATGTCGATCGATGAACTTCATTAA 58.797 34.615 22.50 0.00 37.20 1.40
458 459 6.569228 TGTCGATCGATGAACTTCATTAAC 57.431 37.500 22.50 3.97 37.20 2.01
459 460 6.096695 TGTCGATCGATGAACTTCATTAACA 58.903 36.000 22.50 6.75 37.20 2.41
460 461 6.588373 TGTCGATCGATGAACTTCATTAACAA 59.412 34.615 22.50 0.00 37.20 2.83
461 462 7.117092 TGTCGATCGATGAACTTCATTAACAAA 59.883 33.333 22.50 0.00 37.20 2.83
462 463 8.116753 GTCGATCGATGAACTTCATTAACAAAT 58.883 33.333 22.50 0.00 37.20 2.32
463 464 9.308318 TCGATCGATGAACTTCATTAACAAATA 57.692 29.630 15.15 0.00 37.20 1.40
507 508 9.836864 AAAACTTCATTTAAGGCTTCTTTCAAT 57.163 25.926 1.30 0.00 39.73 2.57
508 509 9.481340 AAACTTCATTTAAGGCTTCTTTCAATC 57.519 29.630 1.30 0.00 39.73 2.67
509 510 7.308435 ACTTCATTTAAGGCTTCTTTCAATCG 58.692 34.615 1.30 0.00 39.73 3.34
510 511 5.640732 TCATTTAAGGCTTCTTTCAATCGC 58.359 37.500 1.30 0.00 32.23 4.58
511 512 5.182950 TCATTTAAGGCTTCTTTCAATCGCA 59.817 36.000 1.30 0.00 32.23 5.10
512 513 5.643379 TTTAAGGCTTCTTTCAATCGCAT 57.357 34.783 1.30 0.00 32.23 4.73
513 514 3.498927 AAGGCTTCTTTCAATCGCATG 57.501 42.857 0.00 0.00 0.00 4.06
514 515 2.715046 AGGCTTCTTTCAATCGCATGA 58.285 42.857 0.00 0.00 0.00 3.07
515 516 3.285484 AGGCTTCTTTCAATCGCATGAT 58.715 40.909 0.00 0.00 35.98 2.45
516 517 3.698040 AGGCTTCTTTCAATCGCATGATT 59.302 39.130 0.00 0.00 45.70 2.57
517 518 4.040376 GGCTTCTTTCAATCGCATGATTC 58.960 43.478 0.00 0.00 42.94 2.52
518 519 4.040376 GCTTCTTTCAATCGCATGATTCC 58.960 43.478 0.00 0.00 42.94 3.01
519 520 4.201990 GCTTCTTTCAATCGCATGATTCCT 60.202 41.667 0.00 0.00 42.94 3.36
520 521 5.008019 GCTTCTTTCAATCGCATGATTCCTA 59.992 40.000 0.00 0.00 42.94 2.94
521 522 6.458751 GCTTCTTTCAATCGCATGATTCCTAA 60.459 38.462 0.00 0.00 42.94 2.69
522 523 7.389803 TTCTTTCAATCGCATGATTCCTAAA 57.610 32.000 0.00 0.00 42.94 1.85
523 524 7.389803 TCTTTCAATCGCATGATTCCTAAAA 57.610 32.000 0.00 0.00 42.94 1.52
524 525 7.250569 TCTTTCAATCGCATGATTCCTAAAAC 58.749 34.615 0.00 0.00 42.94 2.43
525 526 6.507958 TTCAATCGCATGATTCCTAAAACA 57.492 33.333 0.00 0.00 42.94 2.83
526 527 5.879237 TCAATCGCATGATTCCTAAAACAC 58.121 37.500 0.00 0.00 42.94 3.32
527 528 5.414144 TCAATCGCATGATTCCTAAAACACA 59.586 36.000 0.00 0.00 42.94 3.72
528 529 6.095300 TCAATCGCATGATTCCTAAAACACAT 59.905 34.615 0.00 0.00 42.94 3.21
620 621 3.972403 TCGAACGATTTCACAGAGACAA 58.028 40.909 0.00 0.00 0.00 3.18
680 681 7.947890 TGGTCCTTATTGACTCCTTTATTTTGT 59.052 33.333 0.00 0.00 35.54 2.83
717 718 2.166346 TGGGCCTCAAATGTCCCCA 61.166 57.895 4.53 0.00 43.19 4.96
725 726 2.169810 AAATGTCCCCAGGCCCAGT 61.170 57.895 0.00 0.00 0.00 4.00
731 732 2.930019 CCCAGGCCCAGTGTCTCA 60.930 66.667 0.00 0.00 0.00 3.27
741 742 1.345741 CCAGTGTCTCATGTGTGTCCT 59.654 52.381 0.00 0.00 0.00 3.85
775 778 4.202684 TGGGTAAGAGAAGGAGAGAAGTGA 60.203 45.833 0.00 0.00 0.00 3.41
823 826 1.198094 TCCCTCGCATCCCTGAACAA 61.198 55.000 0.00 0.00 0.00 2.83
894 897 2.685380 CCCTTCCCTCCTCTGCGT 60.685 66.667 0.00 0.00 0.00 5.24
1157 1185 1.559682 ACCGAGGTGGAGCAAATATGT 59.440 47.619 0.00 0.00 42.00 2.29
1408 1450 1.338020 CTCCTTCCTGTTGTTGTTGGC 59.662 52.381 0.00 0.00 0.00 4.52
1740 1782 1.674322 CGGTGGCAGGGAATTCGTT 60.674 57.895 0.00 0.00 0.00 3.85
1914 1956 1.226859 GATGTGCCCGTCGATTCGA 60.227 57.895 4.29 4.29 0.00 3.71
2175 2221 5.928976 TGTTCTCTGAGGAACTTGAATTCA 58.071 37.500 3.38 3.38 44.02 2.57
2266 2315 4.280436 ACCGTGATTCATGACACCTAAA 57.720 40.909 7.46 0.00 34.05 1.85
2274 2326 4.150897 TCATGACACCTAAATACTGCCC 57.849 45.455 0.00 0.00 0.00 5.36
2439 2492 0.923358 TGAAAAGAGGTGGGTGTGGT 59.077 50.000 0.00 0.00 0.00 4.16
2440 2493 1.318576 GAAAAGAGGTGGGTGTGGTG 58.681 55.000 0.00 0.00 0.00 4.17
2441 2494 0.923358 AAAAGAGGTGGGTGTGGTGA 59.077 50.000 0.00 0.00 0.00 4.02
2450 2503 1.271871 TGGGTGTGGTGATGGCTTAAG 60.272 52.381 0.00 0.00 0.00 1.85
2459 2512 6.162777 GTGGTGATGGCTTAAGCAAAATTTA 58.837 36.000 27.83 7.33 44.36 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.517913 GGCCGTCCGTAAGTGTAGC 60.518 63.158 0.00 0.00 0.00 3.58
1 2 0.179145 CTGGCCGTCCGTAAGTGTAG 60.179 60.000 0.00 0.00 34.14 2.74
2 3 0.895100 ACTGGCCGTCCGTAAGTGTA 60.895 55.000 0.00 0.00 34.14 2.90
3 4 2.205152 ACTGGCCGTCCGTAAGTGT 61.205 57.895 0.00 0.00 34.14 3.55
4 5 1.736645 CACTGGCCGTCCGTAAGTG 60.737 63.158 0.00 0.00 34.14 3.16
5 6 2.654877 CACTGGCCGTCCGTAAGT 59.345 61.111 0.00 0.00 34.14 2.24
6 7 2.813908 GCACTGGCCGTCCGTAAG 60.814 66.667 0.00 0.00 34.14 2.34
7 8 3.617735 TGCACTGGCCGTCCGTAA 61.618 61.111 0.00 0.00 40.13 3.18
8 9 4.367023 GTGCACTGGCCGTCCGTA 62.367 66.667 10.32 0.00 40.13 4.02
12 13 4.980805 TTCCGTGCACTGGCCGTC 62.981 66.667 16.19 0.00 40.13 4.79
13 14 4.555709 TTTCCGTGCACTGGCCGT 62.556 61.111 16.19 0.00 40.13 5.68
14 15 3.283684 TTTTCCGTGCACTGGCCG 61.284 61.111 16.19 0.24 40.13 6.13
15 16 1.805428 ATGTTTTCCGTGCACTGGCC 61.805 55.000 16.19 0.00 40.13 5.36
16 17 0.664166 CATGTTTTCCGTGCACTGGC 60.664 55.000 16.19 5.82 41.68 4.85
17 18 0.667993 ACATGTTTTCCGTGCACTGG 59.332 50.000 16.19 17.30 33.01 4.00
18 19 3.491356 CATACATGTTTTCCGTGCACTG 58.509 45.455 16.19 8.86 33.01 3.66
19 20 2.095263 GCATACATGTTTTCCGTGCACT 60.095 45.455 16.19 0.00 33.01 4.40
20 21 2.250188 GCATACATGTTTTCCGTGCAC 58.750 47.619 6.82 6.82 33.01 4.57
21 22 1.135831 CGCATACATGTTTTCCGTGCA 60.136 47.619 2.30 0.00 33.01 4.57
22 23 1.534028 CGCATACATGTTTTCCGTGC 58.466 50.000 2.30 4.96 33.01 5.34
23 24 1.534028 GCGCATACATGTTTTCCGTG 58.466 50.000 2.30 0.00 36.08 4.94
24 25 0.096281 CGCGCATACATGTTTTCCGT 59.904 50.000 8.75 0.00 0.00 4.69
25 26 0.588730 CCGCGCATACATGTTTTCCG 60.589 55.000 8.75 3.59 0.00 4.30
26 27 0.730265 TCCGCGCATACATGTTTTCC 59.270 50.000 8.75 0.00 0.00 3.13
27 28 1.268032 CCTCCGCGCATACATGTTTTC 60.268 52.381 8.75 0.00 0.00 2.29
28 29 0.732571 CCTCCGCGCATACATGTTTT 59.267 50.000 8.75 0.00 0.00 2.43
29 30 1.095228 CCCTCCGCGCATACATGTTT 61.095 55.000 8.75 0.00 0.00 2.83
30 31 1.523711 CCCTCCGCGCATACATGTT 60.524 57.895 8.75 0.00 0.00 2.71
31 32 2.108976 CCCTCCGCGCATACATGT 59.891 61.111 8.75 2.69 0.00 3.21
32 33 2.666190 CCCCTCCGCGCATACATG 60.666 66.667 8.75 0.00 0.00 3.21
33 34 3.941188 CCCCCTCCGCGCATACAT 61.941 66.667 8.75 0.00 0.00 2.29
35 36 4.301027 CTCCCCCTCCGCGCATAC 62.301 72.222 8.75 0.00 0.00 2.39
36 37 4.853142 ACTCCCCCTCCGCGCATA 62.853 66.667 8.75 0.00 0.00 3.14
42 43 3.465403 CAGCTCACTCCCCCTCCG 61.465 72.222 0.00 0.00 0.00 4.63
43 44 0.985490 AATCAGCTCACTCCCCCTCC 60.985 60.000 0.00 0.00 0.00 4.30
44 45 0.179936 CAATCAGCTCACTCCCCCTC 59.820 60.000 0.00 0.00 0.00 4.30
45 46 1.277580 CCAATCAGCTCACTCCCCCT 61.278 60.000 0.00 0.00 0.00 4.79
46 47 1.225704 CCAATCAGCTCACTCCCCC 59.774 63.158 0.00 0.00 0.00 5.40
47 48 0.393537 CACCAATCAGCTCACTCCCC 60.394 60.000 0.00 0.00 0.00 4.81
48 49 1.028868 GCACCAATCAGCTCACTCCC 61.029 60.000 0.00 0.00 0.00 4.30
49 50 0.035630 AGCACCAATCAGCTCACTCC 60.036 55.000 0.00 0.00 36.00 3.85
50 51 3.547567 AGCACCAATCAGCTCACTC 57.452 52.632 0.00 0.00 36.00 3.51
55 56 4.039488 TGAAAAATTGAGCACCAATCAGCT 59.961 37.500 5.07 0.00 44.28 4.24
56 57 4.151157 GTGAAAAATTGAGCACCAATCAGC 59.849 41.667 5.07 0.00 44.28 4.26
57 58 5.535333 AGTGAAAAATTGAGCACCAATCAG 58.465 37.500 5.07 0.00 44.28 2.90
58 59 5.534207 AGTGAAAAATTGAGCACCAATCA 57.466 34.783 5.07 0.00 44.28 2.57
59 60 6.652245 CAAAGTGAAAAATTGAGCACCAATC 58.348 36.000 5.07 0.00 44.28 2.67
60 61 5.007921 GCAAAGTGAAAAATTGAGCACCAAT 59.992 36.000 0.00 0.00 46.86 3.16
61 62 4.332268 GCAAAGTGAAAAATTGAGCACCAA 59.668 37.500 0.00 0.00 39.41 3.67
62 63 3.870419 GCAAAGTGAAAAATTGAGCACCA 59.130 39.130 0.00 0.00 31.85 4.17
63 64 3.060339 CGCAAAGTGAAAAATTGAGCACC 60.060 43.478 0.00 0.00 31.85 5.01
64 65 3.551485 ACGCAAAGTGAAAAATTGAGCAC 59.449 39.130 0.00 0.00 0.00 4.40
65 66 3.779759 ACGCAAAGTGAAAAATTGAGCA 58.220 36.364 0.00 0.00 0.00 4.26
66 67 3.796178 TGACGCAAAGTGAAAAATTGAGC 59.204 39.130 0.00 0.00 0.00 4.26
67 68 5.516339 AGTTGACGCAAAGTGAAAAATTGAG 59.484 36.000 0.00 0.00 0.00 3.02
68 69 5.288232 CAGTTGACGCAAAGTGAAAAATTGA 59.712 36.000 0.29 0.00 33.11 2.57
69 70 5.483213 CAGTTGACGCAAAGTGAAAAATTG 58.517 37.500 0.29 0.00 33.11 2.32
70 71 4.032786 GCAGTTGACGCAAAGTGAAAAATT 59.967 37.500 9.13 0.00 33.11 1.82
71 72 3.551485 GCAGTTGACGCAAAGTGAAAAAT 59.449 39.130 9.13 0.00 33.11 1.82
72 73 2.920490 GCAGTTGACGCAAAGTGAAAAA 59.080 40.909 9.13 0.00 33.11 1.94
73 74 2.525055 GCAGTTGACGCAAAGTGAAAA 58.475 42.857 9.13 0.00 33.11 2.29
74 75 1.530852 CGCAGTTGACGCAAAGTGAAA 60.531 47.619 9.13 0.00 33.11 2.69
75 76 0.027455 CGCAGTTGACGCAAAGTGAA 59.973 50.000 9.13 0.00 33.11 3.18
76 77 1.641140 CGCAGTTGACGCAAAGTGA 59.359 52.632 9.13 0.00 33.11 3.41
77 78 1.369209 CCGCAGTTGACGCAAAGTG 60.369 57.895 1.99 1.99 34.24 3.16
78 79 3.022287 CCGCAGTTGACGCAAAGT 58.978 55.556 0.00 0.00 0.00 2.66
79 80 2.427410 GCCGCAGTTGACGCAAAG 60.427 61.111 0.00 0.00 0.00 2.77
80 81 2.892334 GAGCCGCAGTTGACGCAAA 61.892 57.895 0.00 0.00 0.00 3.68
81 82 3.345808 GAGCCGCAGTTGACGCAA 61.346 61.111 0.00 0.00 0.00 4.85
82 83 4.600576 TGAGCCGCAGTTGACGCA 62.601 61.111 0.00 0.00 0.00 5.24
83 84 4.077188 GTGAGCCGCAGTTGACGC 62.077 66.667 0.00 0.00 0.00 5.19
84 85 1.959899 GATGTGAGCCGCAGTTGACG 61.960 60.000 0.00 0.00 0.00 4.35
85 86 1.790387 GATGTGAGCCGCAGTTGAC 59.210 57.895 0.00 0.00 0.00 3.18
86 87 1.737735 CGATGTGAGCCGCAGTTGA 60.738 57.895 0.00 0.00 0.00 3.18
87 88 2.780643 CGATGTGAGCCGCAGTTG 59.219 61.111 0.00 0.00 0.00 3.16
93 94 0.529337 AATGAGAGCGATGTGAGCCG 60.529 55.000 0.00 0.00 34.64 5.52
94 95 1.202510 AGAATGAGAGCGATGTGAGCC 60.203 52.381 0.00 0.00 34.64 4.70
95 96 1.859703 CAGAATGAGAGCGATGTGAGC 59.140 52.381 0.00 0.00 39.69 4.26
96 97 1.859703 GCAGAATGAGAGCGATGTGAG 59.140 52.381 0.00 0.00 39.69 3.51
97 98 1.472201 GGCAGAATGAGAGCGATGTGA 60.472 52.381 0.00 0.00 39.69 3.58
98 99 0.935898 GGCAGAATGAGAGCGATGTG 59.064 55.000 0.00 0.00 39.69 3.21
99 100 0.538584 TGGCAGAATGAGAGCGATGT 59.461 50.000 0.00 0.00 39.69 3.06
100 101 0.935898 GTGGCAGAATGAGAGCGATG 59.064 55.000 0.00 0.00 39.69 3.84
101 102 0.538584 TGTGGCAGAATGAGAGCGAT 59.461 50.000 0.00 0.00 39.69 4.58
102 103 0.538584 ATGTGGCAGAATGAGAGCGA 59.461 50.000 0.00 0.00 39.69 4.93
103 104 0.935898 GATGTGGCAGAATGAGAGCG 59.064 55.000 0.00 0.00 39.69 5.03
104 105 1.941294 CTGATGTGGCAGAATGAGAGC 59.059 52.381 0.00 0.00 39.69 4.09
105 106 2.937149 CACTGATGTGGCAGAATGAGAG 59.063 50.000 4.00 0.00 38.39 3.20
106 107 2.938314 GCACTGATGTGGCAGAATGAGA 60.938 50.000 4.00 0.00 43.97 3.27
107 108 1.400846 GCACTGATGTGGCAGAATGAG 59.599 52.381 0.00 0.00 43.97 2.90
108 109 1.456296 GCACTGATGTGGCAGAATGA 58.544 50.000 0.00 0.00 43.97 2.57
109 110 0.098200 CGCACTGATGTGGCAGAATG 59.902 55.000 0.00 0.00 43.97 2.67
110 111 0.321919 ACGCACTGATGTGGCAGAAT 60.322 50.000 0.00 0.00 43.97 2.40
111 112 0.320050 TACGCACTGATGTGGCAGAA 59.680 50.000 0.00 0.00 43.97 3.02
112 113 0.108662 CTACGCACTGATGTGGCAGA 60.109 55.000 0.00 0.00 43.97 4.26
113 114 1.699656 GCTACGCACTGATGTGGCAG 61.700 60.000 0.00 0.00 43.97 4.85
114 115 1.741401 GCTACGCACTGATGTGGCA 60.741 57.895 5.64 0.00 43.97 4.92
115 116 2.464459 GGCTACGCACTGATGTGGC 61.464 63.158 0.00 2.72 43.97 5.01
116 117 1.079197 TGGCTACGCACTGATGTGG 60.079 57.895 0.00 0.00 43.97 4.17
117 118 1.699656 GCTGGCTACGCACTGATGTG 61.700 60.000 0.00 0.00 46.37 3.21
118 119 1.448540 GCTGGCTACGCACTGATGT 60.449 57.895 0.00 0.00 0.00 3.06
119 120 0.742281 AAGCTGGCTACGCACTGATG 60.742 55.000 0.00 0.00 0.00 3.07
120 121 0.460987 GAAGCTGGCTACGCACTGAT 60.461 55.000 0.00 0.00 0.00 2.90
121 122 1.079819 GAAGCTGGCTACGCACTGA 60.080 57.895 0.00 0.00 0.00 3.41
122 123 0.742281 ATGAAGCTGGCTACGCACTG 60.742 55.000 0.00 0.00 0.00 3.66
123 124 0.036010 AATGAAGCTGGCTACGCACT 60.036 50.000 0.00 0.00 0.00 4.40
124 125 0.804989 AAATGAAGCTGGCTACGCAC 59.195 50.000 0.00 0.00 0.00 5.34
125 126 1.468520 GAAAATGAAGCTGGCTACGCA 59.531 47.619 0.00 0.00 0.00 5.24
126 127 1.529826 CGAAAATGAAGCTGGCTACGC 60.530 52.381 0.00 0.00 0.00 4.42
127 128 1.529826 GCGAAAATGAAGCTGGCTACG 60.530 52.381 0.00 0.00 0.00 3.51
128 129 1.740025 AGCGAAAATGAAGCTGGCTAC 59.260 47.619 0.00 0.00 40.07 3.58
129 130 2.113860 AGCGAAAATGAAGCTGGCTA 57.886 45.000 0.00 0.00 40.07 3.93
130 131 2.952714 AGCGAAAATGAAGCTGGCT 58.047 47.368 0.00 0.00 40.07 4.75
134 135 5.819379 TCATTCTATCAGCGAAAATGAAGCT 59.181 36.000 0.00 0.00 42.64 3.74
135 136 6.052840 TCATTCTATCAGCGAAAATGAAGC 57.947 37.500 0.00 0.00 34.39 3.86
136 137 7.124471 CACTCATTCTATCAGCGAAAATGAAG 58.876 38.462 0.00 0.00 36.29 3.02
137 138 6.595326 ACACTCATTCTATCAGCGAAAATGAA 59.405 34.615 0.00 0.00 36.29 2.57
138 139 6.108687 ACACTCATTCTATCAGCGAAAATGA 58.891 36.000 0.00 0.00 35.62 2.57
139 140 6.257411 AGACACTCATTCTATCAGCGAAAATG 59.743 38.462 0.00 0.00 0.00 2.32
140 141 6.344500 AGACACTCATTCTATCAGCGAAAAT 58.656 36.000 0.00 0.00 0.00 1.82
141 142 5.724328 AGACACTCATTCTATCAGCGAAAA 58.276 37.500 0.00 0.00 0.00 2.29
142 143 5.330455 AGACACTCATTCTATCAGCGAAA 57.670 39.130 0.00 0.00 0.00 3.46
143 144 4.991153 AGACACTCATTCTATCAGCGAA 57.009 40.909 0.00 0.00 0.00 4.70
144 145 5.126779 ACTAGACACTCATTCTATCAGCGA 58.873 41.667 0.00 0.00 0.00 4.93
145 146 5.431420 ACTAGACACTCATTCTATCAGCG 57.569 43.478 0.00 0.00 0.00 5.18
146 147 7.807433 CACATACTAGACACTCATTCTATCAGC 59.193 40.741 0.00 0.00 0.00 4.26
147 148 8.845227 ACACATACTAGACACTCATTCTATCAG 58.155 37.037 0.00 0.00 0.00 2.90
148 149 8.753497 ACACATACTAGACACTCATTCTATCA 57.247 34.615 0.00 0.00 0.00 2.15
151 152 9.847224 TCATACACATACTAGACACTCATTCTA 57.153 33.333 0.00 0.00 0.00 2.10
152 153 8.753497 TCATACACATACTAGACACTCATTCT 57.247 34.615 0.00 0.00 0.00 2.40
153 154 8.841300 TCTCATACACATACTAGACACTCATTC 58.159 37.037 0.00 0.00 0.00 2.67
154 155 8.625651 GTCTCATACACATACTAGACACTCATT 58.374 37.037 0.00 0.00 34.78 2.57
155 156 7.996066 AGTCTCATACACATACTAGACACTCAT 59.004 37.037 0.00 0.00 36.63 2.90
156 157 7.339482 AGTCTCATACACATACTAGACACTCA 58.661 38.462 0.00 0.00 36.63 3.41
157 158 7.795482 AGTCTCATACACATACTAGACACTC 57.205 40.000 0.00 0.00 36.63 3.51
158 159 8.265764 TGTAGTCTCATACACATACTAGACACT 58.734 37.037 0.00 0.00 36.63 3.55
159 160 8.434733 TGTAGTCTCATACACATACTAGACAC 57.565 38.462 0.00 0.00 36.63 3.67
160 161 9.628500 ATTGTAGTCTCATACACATACTAGACA 57.372 33.333 0.00 0.00 35.44 3.41
163 164 9.684448 CCAATTGTAGTCTCATACACATACTAG 57.316 37.037 4.43 0.00 35.44 2.57
164 165 9.416284 TCCAATTGTAGTCTCATACACATACTA 57.584 33.333 4.43 0.00 35.44 1.82
165 166 8.198109 GTCCAATTGTAGTCTCATACACATACT 58.802 37.037 4.43 0.00 35.44 2.12
166 167 8.198109 AGTCCAATTGTAGTCTCATACACATAC 58.802 37.037 4.43 0.00 35.44 2.39
167 168 8.306313 AGTCCAATTGTAGTCTCATACACATA 57.694 34.615 4.43 0.00 35.44 2.29
168 169 7.187824 AGTCCAATTGTAGTCTCATACACAT 57.812 36.000 4.43 0.00 35.44 3.21
169 170 6.605471 AGTCCAATTGTAGTCTCATACACA 57.395 37.500 4.43 0.00 35.44 3.72
170 171 6.313905 CCAAGTCCAATTGTAGTCTCATACAC 59.686 42.308 4.43 0.00 35.44 2.90
171 172 6.212589 TCCAAGTCCAATTGTAGTCTCATACA 59.787 38.462 4.43 0.00 33.88 2.29
172 173 6.640518 TCCAAGTCCAATTGTAGTCTCATAC 58.359 40.000 4.43 0.00 0.00 2.39
173 174 6.867519 TCCAAGTCCAATTGTAGTCTCATA 57.132 37.500 4.43 0.00 0.00 2.15
174 175 5.762179 TCCAAGTCCAATTGTAGTCTCAT 57.238 39.130 4.43 0.00 0.00 2.90
175 176 5.560722 TTCCAAGTCCAATTGTAGTCTCA 57.439 39.130 4.43 0.00 0.00 3.27
176 177 7.254932 GCATATTCCAAGTCCAATTGTAGTCTC 60.255 40.741 4.43 0.00 0.00 3.36
177 178 6.543831 GCATATTCCAAGTCCAATTGTAGTCT 59.456 38.462 4.43 0.00 0.00 3.24
178 179 6.511767 CGCATATTCCAAGTCCAATTGTAGTC 60.512 42.308 4.43 0.00 0.00 2.59
179 180 5.296780 CGCATATTCCAAGTCCAATTGTAGT 59.703 40.000 4.43 0.00 0.00 2.73
180 181 5.296780 ACGCATATTCCAAGTCCAATTGTAG 59.703 40.000 4.43 0.00 0.00 2.74
181 182 5.189928 ACGCATATTCCAAGTCCAATTGTA 58.810 37.500 4.43 0.00 0.00 2.41
182 183 4.016444 ACGCATATTCCAAGTCCAATTGT 58.984 39.130 4.43 0.00 0.00 2.71
183 184 4.637483 ACGCATATTCCAAGTCCAATTG 57.363 40.909 0.00 0.00 0.00 2.32
184 185 5.299279 CCTTACGCATATTCCAAGTCCAATT 59.701 40.000 0.00 0.00 0.00 2.32
185 186 4.821805 CCTTACGCATATTCCAAGTCCAAT 59.178 41.667 0.00 0.00 0.00 3.16
186 187 4.196193 CCTTACGCATATTCCAAGTCCAA 58.804 43.478 0.00 0.00 0.00 3.53
187 188 3.199071 ACCTTACGCATATTCCAAGTCCA 59.801 43.478 0.00 0.00 0.00 4.02
188 189 3.560068 CACCTTACGCATATTCCAAGTCC 59.440 47.826 0.00 0.00 0.00 3.85
189 190 3.560068 CCACCTTACGCATATTCCAAGTC 59.440 47.826 0.00 0.00 0.00 3.01
190 191 3.541632 CCACCTTACGCATATTCCAAGT 58.458 45.455 0.00 0.00 0.00 3.16
191 192 2.878406 CCCACCTTACGCATATTCCAAG 59.122 50.000 0.00 0.00 0.00 3.61
192 193 2.422235 CCCCACCTTACGCATATTCCAA 60.422 50.000 0.00 0.00 0.00 3.53
193 194 1.142060 CCCCACCTTACGCATATTCCA 59.858 52.381 0.00 0.00 0.00 3.53
194 195 1.142262 ACCCCACCTTACGCATATTCC 59.858 52.381 0.00 0.00 0.00 3.01
195 196 2.158871 TCACCCCACCTTACGCATATTC 60.159 50.000 0.00 0.00 0.00 1.75
196 197 1.841277 TCACCCCACCTTACGCATATT 59.159 47.619 0.00 0.00 0.00 1.28
197 198 1.502690 TCACCCCACCTTACGCATAT 58.497 50.000 0.00 0.00 0.00 1.78
198 199 1.140052 CATCACCCCACCTTACGCATA 59.860 52.381 0.00 0.00 0.00 3.14
199 200 0.107214 CATCACCCCACCTTACGCAT 60.107 55.000 0.00 0.00 0.00 4.73
200 201 1.298340 CATCACCCCACCTTACGCA 59.702 57.895 0.00 0.00 0.00 5.24
201 202 1.451387 CCATCACCCCACCTTACGC 60.451 63.158 0.00 0.00 0.00 4.42
202 203 0.178068 CTCCATCACCCCACCTTACG 59.822 60.000 0.00 0.00 0.00 3.18
203 204 1.209747 GACTCCATCACCCCACCTTAC 59.790 57.143 0.00 0.00 0.00 2.34
204 205 1.580059 GACTCCATCACCCCACCTTA 58.420 55.000 0.00 0.00 0.00 2.69
205 206 1.553690 CGACTCCATCACCCCACCTT 61.554 60.000 0.00 0.00 0.00 3.50
206 207 1.990060 CGACTCCATCACCCCACCT 60.990 63.158 0.00 0.00 0.00 4.00
207 208 1.550130 TTCGACTCCATCACCCCACC 61.550 60.000 0.00 0.00 0.00 4.61
208 209 0.391263 GTTCGACTCCATCACCCCAC 60.391 60.000 0.00 0.00 0.00 4.61
209 210 1.884075 CGTTCGACTCCATCACCCCA 61.884 60.000 0.00 0.00 0.00 4.96
210 211 1.153628 CGTTCGACTCCATCACCCC 60.154 63.158 0.00 0.00 0.00 4.95
211 212 1.810030 GCGTTCGACTCCATCACCC 60.810 63.158 0.00 0.00 0.00 4.61
212 213 2.158959 CGCGTTCGACTCCATCACC 61.159 63.158 0.00 0.00 38.10 4.02
213 214 2.158959 CCGCGTTCGACTCCATCAC 61.159 63.158 4.92 0.00 38.10 3.06
214 215 2.180769 CCGCGTTCGACTCCATCA 59.819 61.111 4.92 0.00 38.10 3.07
215 216 2.582498 CCCGCGTTCGACTCCATC 60.582 66.667 4.92 0.00 38.10 3.51
216 217 3.379445 ACCCGCGTTCGACTCCAT 61.379 61.111 4.92 0.00 38.10 3.41
217 218 4.351938 CACCCGCGTTCGACTCCA 62.352 66.667 4.92 0.00 38.10 3.86
218 219 3.562779 TTCACCCGCGTTCGACTCC 62.563 63.158 4.92 0.00 38.10 3.85
219 220 1.662446 TTTCACCCGCGTTCGACTC 60.662 57.895 4.92 0.00 38.10 3.36
220 221 1.952635 GTTTCACCCGCGTTCGACT 60.953 57.895 4.92 0.00 38.10 4.18
221 222 2.547798 GTTTCACCCGCGTTCGAC 59.452 61.111 4.92 0.00 38.10 4.20
222 223 2.662527 GGTTTCACCCGCGTTCGA 60.663 61.111 4.92 0.00 38.10 3.71
223 224 2.049475 TTTGGTTTCACCCGCGTTCG 62.049 55.000 4.92 0.00 37.50 3.95
224 225 0.100861 TTTTGGTTTCACCCGCGTTC 59.899 50.000 4.92 0.00 37.50 3.95
225 226 0.179132 GTTTTGGTTTCACCCGCGTT 60.179 50.000 4.92 0.00 37.50 4.84
226 227 1.033202 AGTTTTGGTTTCACCCGCGT 61.033 50.000 4.92 0.00 37.50 6.01
227 228 0.945813 TAGTTTTGGTTTCACCCGCG 59.054 50.000 0.00 0.00 37.50 6.46
228 229 3.653539 ATTAGTTTTGGTTTCACCCGC 57.346 42.857 0.00 0.00 37.50 6.13
229 230 6.373216 TCATCTATTAGTTTTGGTTTCACCCG 59.627 38.462 0.00 0.00 37.50 5.28
230 231 7.696992 TCATCTATTAGTTTTGGTTTCACCC 57.303 36.000 0.00 0.00 37.50 4.61
231 232 9.626045 CTTTCATCTATTAGTTTTGGTTTCACC 57.374 33.333 0.00 0.00 39.22 4.02
236 237 9.349713 TGTGTCTTTCATCTATTAGTTTTGGTT 57.650 29.630 0.00 0.00 0.00 3.67
237 238 8.918202 TGTGTCTTTCATCTATTAGTTTTGGT 57.082 30.769 0.00 0.00 0.00 3.67
238 239 9.612620 GTTGTGTCTTTCATCTATTAGTTTTGG 57.387 33.333 0.00 0.00 0.00 3.28
239 240 9.318041 CGTTGTGTCTTTCATCTATTAGTTTTG 57.682 33.333 0.00 0.00 0.00 2.44
240 241 8.504005 CCGTTGTGTCTTTCATCTATTAGTTTT 58.496 33.333 0.00 0.00 0.00 2.43
241 242 7.360946 GCCGTTGTGTCTTTCATCTATTAGTTT 60.361 37.037 0.00 0.00 0.00 2.66
242 243 6.092259 GCCGTTGTGTCTTTCATCTATTAGTT 59.908 38.462 0.00 0.00 0.00 2.24
243 244 5.581085 GCCGTTGTGTCTTTCATCTATTAGT 59.419 40.000 0.00 0.00 0.00 2.24
244 245 5.812642 AGCCGTTGTGTCTTTCATCTATTAG 59.187 40.000 0.00 0.00 0.00 1.73
245 246 5.730550 AGCCGTTGTGTCTTTCATCTATTA 58.269 37.500 0.00 0.00 0.00 0.98
246 247 4.579869 AGCCGTTGTGTCTTTCATCTATT 58.420 39.130 0.00 0.00 0.00 1.73
247 248 4.207891 AGCCGTTGTGTCTTTCATCTAT 57.792 40.909 0.00 0.00 0.00 1.98
248 249 3.678056 AGCCGTTGTGTCTTTCATCTA 57.322 42.857 0.00 0.00 0.00 1.98
249 250 2.550830 AGCCGTTGTGTCTTTCATCT 57.449 45.000 0.00 0.00 0.00 2.90
250 251 3.120304 GGTTAGCCGTTGTGTCTTTCATC 60.120 47.826 0.00 0.00 0.00 2.92
251 252 2.812011 GGTTAGCCGTTGTGTCTTTCAT 59.188 45.455 0.00 0.00 0.00 2.57
252 253 2.215196 GGTTAGCCGTTGTGTCTTTCA 58.785 47.619 0.00 0.00 0.00 2.69
253 254 2.215196 TGGTTAGCCGTTGTGTCTTTC 58.785 47.619 0.00 0.00 37.67 2.62
254 255 2.335316 TGGTTAGCCGTTGTGTCTTT 57.665 45.000 0.00 0.00 37.67 2.52
255 256 2.335316 TTGGTTAGCCGTTGTGTCTT 57.665 45.000 0.00 0.00 37.67 3.01
256 257 2.335316 TTTGGTTAGCCGTTGTGTCT 57.665 45.000 0.00 0.00 37.67 3.41
257 258 3.423996 TTTTTGGTTAGCCGTTGTGTC 57.576 42.857 0.00 0.00 37.67 3.67
258 259 4.822896 TCTATTTTTGGTTAGCCGTTGTGT 59.177 37.500 0.00 0.00 37.67 3.72
259 260 5.048991 AGTCTATTTTTGGTTAGCCGTTGTG 60.049 40.000 0.00 0.00 37.67 3.33
260 261 5.067954 AGTCTATTTTTGGTTAGCCGTTGT 58.932 37.500 0.00 0.00 37.67 3.32
261 262 5.622770 AGTCTATTTTTGGTTAGCCGTTG 57.377 39.130 0.00 0.00 37.67 4.10
262 263 8.042515 TGTATAGTCTATTTTTGGTTAGCCGTT 58.957 33.333 0.00 0.00 37.67 4.44
263 264 7.558604 TGTATAGTCTATTTTTGGTTAGCCGT 58.441 34.615 0.00 0.00 37.67 5.68
264 265 8.428186 TTGTATAGTCTATTTTTGGTTAGCCG 57.572 34.615 0.00 0.00 37.67 5.52
265 266 9.999009 GTTTGTATAGTCTATTTTTGGTTAGCC 57.001 33.333 0.00 0.00 0.00 3.93
279 280 9.471702 TGTTTAGCCTACTAGTTTGTATAGTCT 57.528 33.333 0.00 0.00 35.20 3.24
284 285 8.978472 TCTCATGTTTAGCCTACTAGTTTGTAT 58.022 33.333 0.00 0.00 0.00 2.29
285 286 8.357290 TCTCATGTTTAGCCTACTAGTTTGTA 57.643 34.615 0.00 0.00 0.00 2.41
286 287 7.241042 TCTCATGTTTAGCCTACTAGTTTGT 57.759 36.000 0.00 0.00 0.00 2.83
287 288 8.723942 ATTCTCATGTTTAGCCTACTAGTTTG 57.276 34.615 0.00 0.00 0.00 2.93
290 291 8.643324 CCTTATTCTCATGTTTAGCCTACTAGT 58.357 37.037 0.00 0.00 0.00 2.57
291 292 8.861086 TCCTTATTCTCATGTTTAGCCTACTAG 58.139 37.037 0.00 0.00 0.00 2.57
292 293 8.777578 TCCTTATTCTCATGTTTAGCCTACTA 57.222 34.615 0.00 0.00 0.00 1.82
293 294 7.676683 TCCTTATTCTCATGTTTAGCCTACT 57.323 36.000 0.00 0.00 0.00 2.57
294 295 8.204836 TCTTCCTTATTCTCATGTTTAGCCTAC 58.795 37.037 0.00 0.00 0.00 3.18
295 296 8.319057 TCTTCCTTATTCTCATGTTTAGCCTA 57.681 34.615 0.00 0.00 0.00 3.93
296 297 7.200434 TCTTCCTTATTCTCATGTTTAGCCT 57.800 36.000 0.00 0.00 0.00 4.58
297 298 7.770897 TCTTCTTCCTTATTCTCATGTTTAGCC 59.229 37.037 0.00 0.00 0.00 3.93
298 299 8.608317 GTCTTCTTCCTTATTCTCATGTTTAGC 58.392 37.037 0.00 0.00 0.00 3.09
299 300 9.658799 TGTCTTCTTCCTTATTCTCATGTTTAG 57.341 33.333 0.00 0.00 0.00 1.85
300 301 9.436957 GTGTCTTCTTCCTTATTCTCATGTTTA 57.563 33.333 0.00 0.00 0.00 2.01
301 302 8.160106 AGTGTCTTCTTCCTTATTCTCATGTTT 58.840 33.333 0.00 0.00 0.00 2.83
302 303 7.684529 AGTGTCTTCTTCCTTATTCTCATGTT 58.315 34.615 0.00 0.00 0.00 2.71
303 304 7.251321 AGTGTCTTCTTCCTTATTCTCATGT 57.749 36.000 0.00 0.00 0.00 3.21
304 305 8.558973 AAAGTGTCTTCTTCCTTATTCTCATG 57.441 34.615 0.00 0.00 0.00 3.07
305 306 7.547370 CGAAAGTGTCTTCTTCCTTATTCTCAT 59.453 37.037 0.00 0.00 0.00 2.90
306 307 6.868864 CGAAAGTGTCTTCTTCCTTATTCTCA 59.131 38.462 0.00 0.00 0.00 3.27
307 308 7.062488 GTCGAAAGTGTCTTCTTCCTTATTCTC 59.938 40.741 0.00 0.00 0.00 2.87
308 309 6.869388 GTCGAAAGTGTCTTCTTCCTTATTCT 59.131 38.462 0.00 0.00 0.00 2.40
309 310 6.183359 CGTCGAAAGTGTCTTCTTCCTTATTC 60.183 42.308 0.00 0.00 0.00 1.75
310 311 5.634020 CGTCGAAAGTGTCTTCTTCCTTATT 59.366 40.000 0.00 0.00 0.00 1.40
311 312 5.162075 CGTCGAAAGTGTCTTCTTCCTTAT 58.838 41.667 0.00 0.00 0.00 1.73
312 313 4.543692 CGTCGAAAGTGTCTTCTTCCTTA 58.456 43.478 0.00 0.00 0.00 2.69
313 314 3.381949 CGTCGAAAGTGTCTTCTTCCTT 58.618 45.455 0.00 0.00 0.00 3.36
314 315 2.862921 GCGTCGAAAGTGTCTTCTTCCT 60.863 50.000 0.00 0.00 0.00 3.36
315 316 1.456165 GCGTCGAAAGTGTCTTCTTCC 59.544 52.381 0.00 0.00 0.00 3.46
316 317 1.456165 GGCGTCGAAAGTGTCTTCTTC 59.544 52.381 0.00 0.00 0.00 2.87
317 318 1.499049 GGCGTCGAAAGTGTCTTCTT 58.501 50.000 0.00 0.00 0.00 2.52
318 319 0.319641 GGGCGTCGAAAGTGTCTTCT 60.320 55.000 0.00 0.00 0.00 2.85
319 320 0.599204 TGGGCGTCGAAAGTGTCTTC 60.599 55.000 0.00 0.00 0.00 2.87
320 321 0.034896 ATGGGCGTCGAAAGTGTCTT 59.965 50.000 0.00 0.00 0.00 3.01
321 322 0.670546 CATGGGCGTCGAAAGTGTCT 60.671 55.000 0.00 0.00 0.00 3.41
322 323 1.635663 CCATGGGCGTCGAAAGTGTC 61.636 60.000 2.85 0.00 0.00 3.67
323 324 1.671054 CCATGGGCGTCGAAAGTGT 60.671 57.895 2.85 0.00 0.00 3.55
324 325 3.039202 GCCATGGGCGTCGAAAGTG 62.039 63.158 15.13 0.00 39.62 3.16
325 326 2.746277 GCCATGGGCGTCGAAAGT 60.746 61.111 15.13 0.00 39.62 2.66
335 336 1.528542 CTCATGCCTCAGCCATGGG 60.529 63.158 15.13 0.00 38.69 4.00
336 337 1.528542 CCTCATGCCTCAGCCATGG 60.529 63.158 7.63 7.63 38.69 3.66
337 338 0.818445 GTCCTCATGCCTCAGCCATG 60.818 60.000 0.00 0.00 38.69 3.66
338 339 0.987081 AGTCCTCATGCCTCAGCCAT 60.987 55.000 0.00 0.00 38.69 4.40
339 340 1.203441 AAGTCCTCATGCCTCAGCCA 61.203 55.000 0.00 0.00 38.69 4.75
340 341 0.463474 GAAGTCCTCATGCCTCAGCC 60.463 60.000 0.00 0.00 38.69 4.85
341 342 0.251354 TGAAGTCCTCATGCCTCAGC 59.749 55.000 0.00 0.00 40.48 4.26
342 343 1.277273 TGTGAAGTCCTCATGCCTCAG 59.723 52.381 0.00 0.00 36.14 3.35
343 344 1.351076 TGTGAAGTCCTCATGCCTCA 58.649 50.000 0.00 0.00 36.14 3.86
344 345 2.354259 CTTGTGAAGTCCTCATGCCTC 58.646 52.381 0.00 0.00 36.14 4.70
345 346 1.612726 GCTTGTGAAGTCCTCATGCCT 60.613 52.381 0.00 0.00 36.14 4.75
346 347 0.807496 GCTTGTGAAGTCCTCATGCC 59.193 55.000 0.00 0.00 36.14 4.40
347 348 1.818642 AGCTTGTGAAGTCCTCATGC 58.181 50.000 0.00 0.00 38.75 4.06
348 349 3.567164 ACAAAGCTTGTGAAGTCCTCATG 59.433 43.478 0.00 0.00 43.48 3.07
349 350 3.825328 ACAAAGCTTGTGAAGTCCTCAT 58.175 40.909 0.00 0.00 43.48 2.90
350 351 3.281727 ACAAAGCTTGTGAAGTCCTCA 57.718 42.857 0.00 0.00 43.48 3.86
351 352 5.948992 AATACAAAGCTTGTGAAGTCCTC 57.051 39.130 0.00 0.00 45.03 3.71
352 353 5.594317 ACAAATACAAAGCTTGTGAAGTCCT 59.406 36.000 0.00 0.00 45.03 3.85
353 354 5.831997 ACAAATACAAAGCTTGTGAAGTCC 58.168 37.500 0.00 0.00 45.03 3.85
354 355 5.621228 CGACAAATACAAAGCTTGTGAAGTC 59.379 40.000 0.00 2.41 45.03 3.01
355 356 5.065988 ACGACAAATACAAAGCTTGTGAAGT 59.934 36.000 0.00 0.00 45.03 3.01
356 357 5.510671 ACGACAAATACAAAGCTTGTGAAG 58.489 37.500 0.00 0.00 45.03 3.02
357 358 5.493133 ACGACAAATACAAAGCTTGTGAA 57.507 34.783 0.00 0.00 45.03 3.18
358 359 5.163703 ACAACGACAAATACAAAGCTTGTGA 60.164 36.000 0.00 0.00 45.03 3.58
359 360 5.034152 ACAACGACAAATACAAAGCTTGTG 58.966 37.500 0.00 3.34 45.03 3.33
360 361 9.014816 TGGTACAACGACAAATACAAAGCTTGT 62.015 37.037 0.00 3.12 41.47 3.16
361 362 5.623673 GGTACAACGACAAATACAAAGCTTG 59.376 40.000 0.00 0.00 0.00 4.01
362 363 5.297278 TGGTACAACGACAAATACAAAGCTT 59.703 36.000 0.00 0.00 31.92 3.74
363 364 4.817464 TGGTACAACGACAAATACAAAGCT 59.183 37.500 0.00 0.00 31.92 3.74
364 365 5.098218 TGGTACAACGACAAATACAAAGC 57.902 39.130 0.00 0.00 31.92 3.51
381 382 5.621197 TGTGCACTAAATCAACATGGTAC 57.379 39.130 19.41 0.00 0.00 3.34
382 383 5.182950 CCTTGTGCACTAAATCAACATGGTA 59.817 40.000 19.41 0.00 0.00 3.25
383 384 4.022068 CCTTGTGCACTAAATCAACATGGT 60.022 41.667 19.41 0.00 0.00 3.55
384 385 4.487948 CCTTGTGCACTAAATCAACATGG 58.512 43.478 19.41 2.19 0.00 3.66
385 386 3.922240 GCCTTGTGCACTAAATCAACATG 59.078 43.478 19.41 0.00 40.77 3.21
386 387 4.178545 GCCTTGTGCACTAAATCAACAT 57.821 40.909 19.41 0.00 40.77 2.71
387 388 3.641437 GCCTTGTGCACTAAATCAACA 57.359 42.857 19.41 0.00 40.77 3.33
399 400 5.954296 ATATGATTACAGATGCCTTGTGC 57.046 39.130 0.00 0.00 41.77 4.57
400 401 8.557592 ACATATATGATTACAGATGCCTTGTG 57.442 34.615 19.63 0.00 0.00 3.33
401 402 9.881649 CTACATATATGATTACAGATGCCTTGT 57.118 33.333 19.63 0.00 0.00 3.16
402 403 9.881649 ACTACATATATGATTACAGATGCCTTG 57.118 33.333 19.63 0.00 0.00 3.61
404 405 9.881649 CAACTACATATATGATTACAGATGCCT 57.118 33.333 19.63 0.00 0.00 4.75
405 406 9.658799 ACAACTACATATATGATTACAGATGCC 57.341 33.333 19.63 0.00 0.00 4.40
417 418 9.427127 CGATCGACATCTACAACTACATATATG 57.573 37.037 10.26 11.29 0.00 1.78
418 419 9.379791 TCGATCGACATCTACAACTACATATAT 57.620 33.333 15.15 0.00 0.00 0.86
419 420 8.767478 TCGATCGACATCTACAACTACATATA 57.233 34.615 15.15 0.00 0.00 0.86
420 421 7.668525 TCGATCGACATCTACAACTACATAT 57.331 36.000 15.15 0.00 0.00 1.78
421 422 7.386848 TCATCGATCGACATCTACAACTACATA 59.613 37.037 22.06 0.00 0.00 2.29
422 423 6.204882 TCATCGATCGACATCTACAACTACAT 59.795 38.462 22.06 0.00 0.00 2.29
423 424 5.526111 TCATCGATCGACATCTACAACTACA 59.474 40.000 22.06 0.00 0.00 2.74
424 425 5.986936 TCATCGATCGACATCTACAACTAC 58.013 41.667 22.06 0.00 0.00 2.73
425 426 6.260271 AGTTCATCGATCGACATCTACAACTA 59.740 38.462 22.06 0.00 0.00 2.24
426 427 5.066634 AGTTCATCGATCGACATCTACAACT 59.933 40.000 22.06 15.86 0.00 3.16
427 428 5.274718 AGTTCATCGATCGACATCTACAAC 58.725 41.667 22.06 14.05 0.00 3.32
428 429 5.500645 AGTTCATCGATCGACATCTACAA 57.499 39.130 22.06 2.73 0.00 2.41
429 430 5.065988 TGAAGTTCATCGATCGACATCTACA 59.934 40.000 22.06 12.44 0.00 2.74
430 431 5.511571 TGAAGTTCATCGATCGACATCTAC 58.488 41.667 22.06 13.72 0.00 2.59
431 432 5.751243 TGAAGTTCATCGATCGACATCTA 57.249 39.130 22.06 0.00 0.00 1.98
432 433 4.639135 TGAAGTTCATCGATCGACATCT 57.361 40.909 22.06 13.27 0.00 2.90
433 434 5.896922 AATGAAGTTCATCGATCGACATC 57.103 39.130 22.06 11.17 35.76 3.06
434 435 6.756542 TGTTAATGAAGTTCATCGATCGACAT 59.243 34.615 22.06 14.18 35.76 3.06
435 436 6.096695 TGTTAATGAAGTTCATCGATCGACA 58.903 36.000 22.06 12.36 35.76 4.35
436 437 6.569228 TGTTAATGAAGTTCATCGATCGAC 57.431 37.500 22.06 8.37 35.76 4.20
437 438 7.589574 TTTGTTAATGAAGTTCATCGATCGA 57.410 32.000 21.86 21.86 35.76 3.59
481 482 9.836864 ATTGAAAGAAGCCTTAAATGAAGTTTT 57.163 25.926 0.00 0.00 32.74 2.43
482 483 9.481340 GATTGAAAGAAGCCTTAAATGAAGTTT 57.519 29.630 0.00 0.00 32.74 2.66
483 484 7.809806 CGATTGAAAGAAGCCTTAAATGAAGTT 59.190 33.333 0.00 0.00 32.74 2.66
484 485 7.308435 CGATTGAAAGAAGCCTTAAATGAAGT 58.692 34.615 0.00 0.00 32.74 3.01
485 486 6.252228 GCGATTGAAAGAAGCCTTAAATGAAG 59.748 38.462 0.00 0.00 34.63 3.02
486 487 6.092748 GCGATTGAAAGAAGCCTTAAATGAA 58.907 36.000 0.00 0.00 31.15 2.57
487 488 5.182950 TGCGATTGAAAGAAGCCTTAAATGA 59.817 36.000 0.00 0.00 31.15 2.57
488 489 5.401550 TGCGATTGAAAGAAGCCTTAAATG 58.598 37.500 0.00 0.00 31.15 2.32
489 490 5.643379 TGCGATTGAAAGAAGCCTTAAAT 57.357 34.783 0.00 0.00 31.15 1.40
490 491 5.182950 TCATGCGATTGAAAGAAGCCTTAAA 59.817 36.000 0.00 0.00 31.15 1.52
491 492 4.699735 TCATGCGATTGAAAGAAGCCTTAA 59.300 37.500 0.00 0.00 31.15 1.85
492 493 4.260985 TCATGCGATTGAAAGAAGCCTTA 58.739 39.130 0.00 0.00 31.15 2.69
493 494 3.084039 TCATGCGATTGAAAGAAGCCTT 58.916 40.909 0.00 0.00 0.00 4.35
494 495 2.715046 TCATGCGATTGAAAGAAGCCT 58.285 42.857 0.00 0.00 0.00 4.58
495 496 3.705043 ATCATGCGATTGAAAGAAGCC 57.295 42.857 0.00 0.00 0.00 4.35
496 497 4.040376 GGAATCATGCGATTGAAAGAAGC 58.960 43.478 0.00 0.00 42.06 3.86
497 498 5.496133 AGGAATCATGCGATTGAAAGAAG 57.504 39.130 0.00 0.00 42.06 2.85
498 499 7.389803 TTTAGGAATCATGCGATTGAAAGAA 57.610 32.000 0.00 0.00 42.06 2.52
499 500 7.094420 TGTTTTAGGAATCATGCGATTGAAAGA 60.094 33.333 0.00 0.00 42.06 2.52
500 501 7.008628 GTGTTTTAGGAATCATGCGATTGAAAG 59.991 37.037 0.00 0.00 42.06 2.62
501 502 6.806249 GTGTTTTAGGAATCATGCGATTGAAA 59.194 34.615 0.00 0.00 42.06 2.69
502 503 6.072230 TGTGTTTTAGGAATCATGCGATTGAA 60.072 34.615 0.00 0.00 42.06 2.69
503 504 5.414144 TGTGTTTTAGGAATCATGCGATTGA 59.586 36.000 0.00 0.00 42.06 2.57
504 505 5.639757 TGTGTTTTAGGAATCATGCGATTG 58.360 37.500 0.00 0.00 42.06 2.67
505 506 5.895636 TGTGTTTTAGGAATCATGCGATT 57.104 34.783 0.00 0.00 44.75 3.34
506 507 5.589855 TCATGTGTTTTAGGAATCATGCGAT 59.410 36.000 0.00 0.00 34.56 4.58
507 508 4.940654 TCATGTGTTTTAGGAATCATGCGA 59.059 37.500 0.00 0.00 34.56 5.10
508 509 5.233957 TCATGTGTTTTAGGAATCATGCG 57.766 39.130 0.00 0.00 34.56 4.73
509 510 7.760794 TCAATTCATGTGTTTTAGGAATCATGC 59.239 33.333 0.00 0.00 34.56 4.06
510 511 9.642327 TTCAATTCATGTGTTTTAGGAATCATG 57.358 29.630 0.00 0.00 35.47 3.07
511 512 9.643693 GTTCAATTCATGTGTTTTAGGAATCAT 57.356 29.630 0.00 0.00 0.00 2.45
512 513 8.637099 TGTTCAATTCATGTGTTTTAGGAATCA 58.363 29.630 0.00 0.00 0.00 2.57
513 514 9.643693 ATGTTCAATTCATGTGTTTTAGGAATC 57.356 29.630 0.00 0.00 0.00 2.52
521 522 9.369904 GGCTTTATATGTTCAATTCATGTGTTT 57.630 29.630 0.00 0.00 0.00 2.83
522 523 8.752187 AGGCTTTATATGTTCAATTCATGTGTT 58.248 29.630 0.00 0.00 0.00 3.32
523 524 8.192774 CAGGCTTTATATGTTCAATTCATGTGT 58.807 33.333 0.00 0.00 0.00 3.72
524 525 7.168637 GCAGGCTTTATATGTTCAATTCATGTG 59.831 37.037 0.00 0.00 0.00 3.21
525 526 7.069085 AGCAGGCTTTATATGTTCAATTCATGT 59.931 33.333 0.00 0.00 0.00 3.21
526 527 7.431249 AGCAGGCTTTATATGTTCAATTCATG 58.569 34.615 0.00 0.00 0.00 3.07
527 528 7.592885 AGCAGGCTTTATATGTTCAATTCAT 57.407 32.000 0.00 0.00 0.00 2.57
528 529 7.229306 CCTAGCAGGCTTTATATGTTCAATTCA 59.771 37.037 0.00 0.00 0.00 2.57
717 718 1.130054 ACACATGAGACACTGGGCCT 61.130 55.000 4.53 0.00 0.00 5.19
725 726 1.762370 ACACAGGACACACATGAGACA 59.238 47.619 0.00 0.00 34.19 3.41
731 732 0.880278 GACGCACACAGGACACACAT 60.880 55.000 0.00 0.00 0.00 3.21
741 742 1.116536 TCTTACCCAGGACGCACACA 61.117 55.000 0.00 0.00 0.00 3.72
775 778 1.826487 GGTTTTCACCGTGCACCCT 60.826 57.895 12.15 0.00 31.60 4.34
823 826 3.782443 GGGAGCGGACGGATTGGT 61.782 66.667 0.00 0.00 0.00 3.67
894 897 3.680920 GAAGGGGAGGAGGAGGCGA 62.681 68.421 0.00 0.00 0.00 5.54
972 1000 1.686587 GCCTTTTGCCTGTAGGTTGTT 59.313 47.619 0.00 0.00 37.57 2.83
1157 1185 0.826715 GCATGAGGGCTGTACAGAGA 59.173 55.000 27.08 4.74 0.00 3.10
1893 1935 0.652592 GAATCGACGGGCACATCAAG 59.347 55.000 0.00 0.00 0.00 3.02
1935 1977 2.659610 AGTCCGCCACTGAGAAGC 59.340 61.111 0.00 0.00 32.26 3.86
2175 2221 2.604046 AGAAGCACACGAACTCAGTT 57.396 45.000 0.00 0.00 0.00 3.16
2266 2315 8.591114 AGTAACAATAGTATATCGGGCAGTAT 57.409 34.615 0.00 0.00 0.00 2.12
2274 2326 9.084164 GTTGGCCATAGTAACAATAGTATATCG 57.916 37.037 6.09 0.00 0.00 2.92
2325 2377 4.819105 AGAATCACTATGTGTTCCCGAA 57.181 40.909 0.00 0.00 34.79 4.30
2403 2455 2.996249 TCAGCTTAGATGCCCTCAAG 57.004 50.000 0.00 0.00 0.00 3.02
2439 2492 6.404708 TGCATAAATTTTGCTTAAGCCATCA 58.595 32.000 24.30 2.82 40.77 3.07
2440 2493 6.907206 TGCATAAATTTTGCTTAAGCCATC 57.093 33.333 24.30 0.00 40.77 3.51
2441 2494 7.868906 ATTGCATAAATTTTGCTTAAGCCAT 57.131 28.000 24.30 11.05 40.77 4.40
2459 2512 9.382275 AGTTTTGAAGTTAAAGTGAAATTGCAT 57.618 25.926 0.00 0.00 0.00 3.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.