Multiple sequence alignment - TraesCS2D01G356900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G356900 chr2D 100.000 3987 0 0 1 3987 459308903 459312889 0.000000e+00 7363.0
1 TraesCS2D01G356900 chr2D 100.000 1195 0 0 4180 5374 459313082 459314276 0.000000e+00 2207.0
2 TraesCS2D01G356900 chr2D 91.667 48 3 1 387 434 29211580 29211534 1.250000e-06 65.8
3 TraesCS2D01G356900 chr2B 89.195 1814 117 30 2207 3985 540705082 540706851 0.000000e+00 2191.0
4 TraesCS2D01G356900 chr2B 86.814 948 41 22 1268 2160 540704066 540704984 0.000000e+00 981.0
5 TraesCS2D01G356900 chr2B 93.171 659 28 8 4721 5371 540707434 540708083 0.000000e+00 952.0
6 TraesCS2D01G356900 chr2B 96.231 451 15 2 4215 4664 540706984 540707433 0.000000e+00 737.0
7 TraesCS2D01G356900 chr2B 87.956 548 26 10 640 1179 540703486 540704001 1.280000e-170 610.0
8 TraesCS2D01G356900 chr2B 81.773 406 27 30 1019 1407 61651720 61652095 4.070000e-76 296.0
9 TraesCS2D01G356900 chr2B 81.235 405 31 27 1019 1407 737735788 737736163 8.810000e-73 285.0
10 TraesCS2D01G356900 chr2B 84.393 173 15 7 1019 1179 32483785 32483957 5.570000e-35 159.0
11 TraesCS2D01G356900 chr2A 93.205 1089 53 9 2675 3754 602478818 602479894 0.000000e+00 1581.0
12 TraesCS2D01G356900 chr2A 86.368 1093 67 41 595 1656 602477153 602478194 0.000000e+00 1118.0
13 TraesCS2D01G356900 chr2A 83.248 973 95 35 4451 5374 602480916 602481869 0.000000e+00 832.0
14 TraesCS2D01G356900 chr2A 89.535 602 36 13 2006 2593 602478187 602478775 0.000000e+00 737.0
15 TraesCS2D01G356900 chr2A 88.492 252 15 5 4214 4458 602480324 602480568 5.260000e-75 292.0
16 TraesCS2D01G356900 chr2A 84.492 187 16 4 3792 3977 602480048 602480222 7.160000e-39 172.0
17 TraesCS2D01G356900 chr2A 97.059 34 1 0 383 416 493835963 493835996 2.090000e-04 58.4
18 TraesCS2D01G356900 chrUn 79.208 505 42 25 1024 1494 276692129 276692604 5.260000e-75 292.0
19 TraesCS2D01G356900 chr6B 81.592 402 29 29 1019 1404 549648641 549649013 1.890000e-74 291.0
20 TraesCS2D01G356900 chr6B 81.034 406 30 31 1019 1407 562865429 562865054 4.100000e-71 279.0
21 TraesCS2D01G356900 chr6B 90.385 208 7 4 1268 1462 59505726 59505519 1.480000e-65 261.0
22 TraesCS2D01G356900 chr6B 97.101 138 4 0 1270 1407 637591477 637591340 3.240000e-57 233.0
23 TraesCS2D01G356900 chr6B 86.310 168 11 3 1024 1179 59505957 59505790 7.160000e-39 172.0
24 TraesCS2D01G356900 chr6B 85.938 128 6 7 1064 1179 637591670 637591543 5.650000e-25 126.0
25 TraesCS2D01G356900 chr5B 81.527 406 28 31 1019 1407 26437815 26438190 1.890000e-74 291.0
26 TraesCS2D01G356900 chr4B 80.741 405 33 27 1019 1407 213032906 213032531 1.910000e-69 274.0
27 TraesCS2D01G356900 chr4B 88.889 45 4 1 375 418 603169468 603169512 3.000000e-03 54.7
28 TraesCS2D01G356900 chr3B 80.905 398 20 31 1019 1407 786705025 786705375 4.130000e-66 263.0
29 TraesCS2D01G356900 chr3B 94.286 35 2 0 387 421 166710560 166710526 3.000000e-03 54.7
30 TraesCS2D01G356900 chr1B 91.379 58 5 0 1019 1076 538533196 538533139 4.460000e-11 80.5
31 TraesCS2D01G356900 chr1B 100.000 28 0 0 389 416 444061184 444061211 1.000000e-02 52.8
32 TraesCS2D01G356900 chr3D 96.774 31 1 0 386 416 609102249 609102279 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G356900 chr2D 459308903 459314276 5373 False 4785.000000 7363 100.000000 1 5374 2 chr2D.!!$F1 5373
1 TraesCS2D01G356900 chr2B 540703486 540708083 4597 False 1094.200000 2191 90.673400 640 5371 5 chr2B.!!$F4 4731
2 TraesCS2D01G356900 chr2A 602477153 602481869 4716 False 788.666667 1581 87.556667 595 5374 6 chr2A.!!$F2 4779

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
618 619 0.040781 GAAGCGGTAAAACTTGCGCA 60.041 50.0 5.66 5.66 30.59 6.09 F
1181 1197 0.032815 CCCCGTGCGAAACCATTTTT 59.967 50.0 0.00 0.00 0.00 1.94 F
1198 1214 0.036765 TTTAGCTACACACGCTGGGG 60.037 55.0 0.00 0.00 38.38 4.96 F
1720 1802 0.170561 AGAACAGTAGCCGCAGTACG 59.829 55.0 0.00 0.00 43.15 3.67 F
2659 2846 0.179018 AAGGGTGATTCCATAGGCGC 60.179 55.0 0.00 0.00 38.11 6.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2427 2601 0.103208 AGCGTACAGATACTGCAGGC 59.897 55.000 19.93 8.2 38.45 4.85 R
2594 2781 0.325933 CAAGTGCAGGGTGGAGATCA 59.674 55.000 0.00 0.0 0.00 2.92 R
2596 2783 1.001641 GCAAGTGCAGGGTGGAGAT 60.002 57.895 0.00 0.0 41.59 2.75 R
3453 3676 1.004277 CGTCTCTCTGTGGCGTGAAC 61.004 60.000 0.00 0.0 0.00 3.18 R
4473 5249 1.165270 ATTGACAAACCTAGCGGTGC 58.835 50.000 0.00 0.0 44.73 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 6.844696 TTTTAGCTAATCGCATGTTAGGAG 57.155 37.500 7.08 0.00 42.61 3.69
41 42 5.784578 TTAGCTAATCGCATGTTAGGAGA 57.215 39.130 0.86 0.00 42.61 3.71
42 43 3.983741 AGCTAATCGCATGTTAGGAGAC 58.016 45.455 0.00 0.00 42.61 3.36
43 44 3.384789 AGCTAATCGCATGTTAGGAGACA 59.615 43.478 0.00 0.00 42.61 3.41
44 45 4.039730 AGCTAATCGCATGTTAGGAGACAT 59.960 41.667 0.00 0.00 42.61 3.06
45 46 4.387256 GCTAATCGCATGTTAGGAGACATC 59.613 45.833 0.00 0.00 38.15 3.06
46 47 4.406648 AATCGCATGTTAGGAGACATCA 57.593 40.909 0.00 0.00 38.15 3.07
47 48 4.613925 ATCGCATGTTAGGAGACATCAT 57.386 40.909 0.00 0.00 38.15 2.45
48 49 4.406648 TCGCATGTTAGGAGACATCATT 57.593 40.909 0.00 0.00 38.15 2.57
49 50 4.122046 TCGCATGTTAGGAGACATCATTG 58.878 43.478 0.00 0.00 38.15 2.82
50 51 3.873361 CGCATGTTAGGAGACATCATTGT 59.127 43.478 0.00 0.00 38.15 2.71
51 52 4.333649 CGCATGTTAGGAGACATCATTGTT 59.666 41.667 0.00 0.00 38.15 2.83
52 53 5.163723 CGCATGTTAGGAGACATCATTGTTT 60.164 40.000 0.00 0.00 38.15 2.83
53 54 6.032094 GCATGTTAGGAGACATCATTGTTTG 58.968 40.000 0.00 0.00 38.15 2.93
54 55 5.627499 TGTTAGGAGACATCATTGTTTGC 57.373 39.130 0.00 0.00 35.79 3.68
55 56 5.316167 TGTTAGGAGACATCATTGTTTGCT 58.684 37.500 0.00 0.00 40.85 3.91
56 57 6.472016 TGTTAGGAGACATCATTGTTTGCTA 58.528 36.000 0.00 0.00 39.06 3.49
57 58 6.939730 TGTTAGGAGACATCATTGTTTGCTAA 59.060 34.615 6.55 6.55 43.71 3.09
58 59 7.446931 TGTTAGGAGACATCATTGTTTGCTAAA 59.553 33.333 10.63 2.56 45.72 1.85
59 60 6.899393 AGGAGACATCATTGTTTGCTAAAA 57.101 33.333 0.00 0.00 36.96 1.52
60 61 7.288810 AGGAGACATCATTGTTTGCTAAAAA 57.711 32.000 0.00 0.00 36.96 1.94
61 62 7.899973 AGGAGACATCATTGTTTGCTAAAAAT 58.100 30.769 0.00 0.00 36.96 1.82
62 63 7.816031 AGGAGACATCATTGTTTGCTAAAAATG 59.184 33.333 15.25 15.25 36.96 2.32
63 64 7.599998 GGAGACATCATTGTTTGCTAAAAATGT 59.400 33.333 19.11 6.08 35.79 2.71
64 65 8.301730 AGACATCATTGTTTGCTAAAAATGTG 57.698 30.769 19.11 17.72 35.79 3.21
65 66 7.927629 AGACATCATTGTTTGCTAAAAATGTGT 59.072 29.630 19.11 19.87 35.79 3.72
66 67 8.075593 ACATCATTGTTTGCTAAAAATGTGTC 57.924 30.769 19.11 0.00 29.55 3.67
67 68 7.927629 ACATCATTGTTTGCTAAAAATGTGTCT 59.072 29.630 19.11 5.05 29.55 3.41
68 69 9.409312 CATCATTGTTTGCTAAAAATGTGTCTA 57.591 29.630 19.11 4.68 0.00 2.59
69 70 8.795786 TCATTGTTTGCTAAAAATGTGTCTAC 57.204 30.769 19.11 0.00 0.00 2.59
70 71 8.629158 TCATTGTTTGCTAAAAATGTGTCTACT 58.371 29.630 19.11 0.00 0.00 2.57
71 72 9.891828 CATTGTTTGCTAAAAATGTGTCTACTA 57.108 29.630 13.69 0.00 0.00 1.82
72 73 9.893305 ATTGTTTGCTAAAAATGTGTCTACTAC 57.107 29.630 0.00 0.00 0.00 2.73
73 74 8.671384 TGTTTGCTAAAAATGTGTCTACTACT 57.329 30.769 0.00 0.00 0.00 2.57
74 75 9.116067 TGTTTGCTAAAAATGTGTCTACTACTT 57.884 29.630 0.00 0.00 0.00 2.24
75 76 9.946165 GTTTGCTAAAAATGTGTCTACTACTTT 57.054 29.630 0.00 0.00 0.00 2.66
173 174 4.660352 TTGCTTTTGTTTTGTCAACTGC 57.340 36.364 0.00 0.00 0.00 4.40
174 175 3.657634 TGCTTTTGTTTTGTCAACTGCA 58.342 36.364 0.00 0.00 35.30 4.41
175 176 3.679025 TGCTTTTGTTTTGTCAACTGCAG 59.321 39.130 13.48 13.48 33.95 4.41
176 177 3.925913 GCTTTTGTTTTGTCAACTGCAGA 59.074 39.130 23.35 0.00 0.00 4.26
177 178 4.388469 GCTTTTGTTTTGTCAACTGCAGAA 59.612 37.500 23.35 0.00 0.00 3.02
178 179 5.107143 GCTTTTGTTTTGTCAACTGCAGAAA 60.107 36.000 23.35 7.10 0.00 2.52
179 180 5.837586 TTTGTTTTGTCAACTGCAGAAAC 57.162 34.783 23.35 18.61 0.00 2.78
180 181 3.843999 TGTTTTGTCAACTGCAGAAACC 58.156 40.909 23.35 2.96 0.00 3.27
181 182 3.256879 TGTTTTGTCAACTGCAGAAACCA 59.743 39.130 23.35 5.83 0.00 3.67
182 183 3.502191 TTTGTCAACTGCAGAAACCAC 57.498 42.857 23.35 9.64 0.00 4.16
183 184 1.388547 TGTCAACTGCAGAAACCACC 58.611 50.000 23.35 1.74 0.00 4.61
184 185 1.340502 TGTCAACTGCAGAAACCACCA 60.341 47.619 23.35 4.46 0.00 4.17
185 186 1.065551 GTCAACTGCAGAAACCACCAC 59.934 52.381 23.35 1.36 0.00 4.16
186 187 1.064758 TCAACTGCAGAAACCACCACT 60.065 47.619 23.35 0.00 0.00 4.00
187 188 2.171659 TCAACTGCAGAAACCACCACTA 59.828 45.455 23.35 0.00 0.00 2.74
188 189 2.549754 CAACTGCAGAAACCACCACTAG 59.450 50.000 23.35 0.00 0.00 2.57
189 190 2.047061 ACTGCAGAAACCACCACTAGA 58.953 47.619 23.35 0.00 0.00 2.43
190 191 2.438021 ACTGCAGAAACCACCACTAGAA 59.562 45.455 23.35 0.00 0.00 2.10
191 192 3.118038 ACTGCAGAAACCACCACTAGAAA 60.118 43.478 23.35 0.00 0.00 2.52
192 193 4.074970 CTGCAGAAACCACCACTAGAAAT 58.925 43.478 8.42 0.00 0.00 2.17
193 194 4.072131 TGCAGAAACCACCACTAGAAATC 58.928 43.478 0.00 0.00 0.00 2.17
194 195 4.202461 TGCAGAAACCACCACTAGAAATCT 60.202 41.667 0.00 0.00 0.00 2.40
195 196 4.762251 GCAGAAACCACCACTAGAAATCTT 59.238 41.667 0.00 0.00 0.00 2.40
196 197 5.335191 GCAGAAACCACCACTAGAAATCTTG 60.335 44.000 0.00 0.00 0.00 3.02
197 198 5.765182 CAGAAACCACCACTAGAAATCTTGT 59.235 40.000 0.00 0.00 32.36 3.16
198 199 5.998363 AGAAACCACCACTAGAAATCTTGTC 59.002 40.000 0.00 0.00 29.82 3.18
199 200 4.974645 ACCACCACTAGAAATCTTGTCA 57.025 40.909 0.00 0.00 29.82 3.58
200 201 5.304686 ACCACCACTAGAAATCTTGTCAA 57.695 39.130 0.00 0.00 29.82 3.18
201 202 5.880901 ACCACCACTAGAAATCTTGTCAAT 58.119 37.500 0.00 0.00 29.82 2.57
202 203 5.940470 ACCACCACTAGAAATCTTGTCAATC 59.060 40.000 0.00 0.00 29.82 2.67
203 204 5.939883 CCACCACTAGAAATCTTGTCAATCA 59.060 40.000 0.00 0.00 29.82 2.57
204 205 6.128172 CCACCACTAGAAATCTTGTCAATCAC 60.128 42.308 0.00 0.00 29.82 3.06
205 206 5.940470 ACCACTAGAAATCTTGTCAATCACC 59.060 40.000 0.00 0.00 29.82 4.02
206 207 5.939883 CCACTAGAAATCTTGTCAATCACCA 59.060 40.000 0.00 0.00 29.82 4.17
207 208 6.600822 CCACTAGAAATCTTGTCAATCACCAT 59.399 38.462 0.00 0.00 29.82 3.55
208 209 7.121759 CCACTAGAAATCTTGTCAATCACCATT 59.878 37.037 0.00 0.00 29.82 3.16
209 210 8.517878 CACTAGAAATCTTGTCAATCACCATTT 58.482 33.333 0.00 0.00 29.82 2.32
210 211 8.517878 ACTAGAAATCTTGTCAATCACCATTTG 58.482 33.333 0.00 0.00 0.00 2.32
211 212 6.694447 AGAAATCTTGTCAATCACCATTTGG 58.306 36.000 0.00 0.00 42.17 3.28
212 213 3.940209 TCTTGTCAATCACCATTTGGC 57.060 42.857 0.00 0.00 39.32 4.52
213 214 3.229293 TCTTGTCAATCACCATTTGGCA 58.771 40.909 0.00 0.00 36.94 4.92
214 215 3.833650 TCTTGTCAATCACCATTTGGCAT 59.166 39.130 0.00 0.00 38.39 4.40
215 216 3.596310 TGTCAATCACCATTTGGCATG 57.404 42.857 0.00 0.00 33.99 4.06
216 217 3.163467 TGTCAATCACCATTTGGCATGA 58.837 40.909 0.00 0.00 33.99 3.07
217 218 3.056678 TGTCAATCACCATTTGGCATGAC 60.057 43.478 0.00 0.00 33.99 3.06
218 219 3.194116 GTCAATCACCATTTGGCATGACT 59.806 43.478 0.00 0.00 39.32 3.41
219 220 3.193903 TCAATCACCATTTGGCATGACTG 59.806 43.478 0.00 0.00 39.32 3.51
220 221 1.548081 TCACCATTTGGCATGACTGG 58.452 50.000 0.00 1.11 39.32 4.00
227 228 4.175337 GGCATGACTGGCGGGCTA 62.175 66.667 0.00 0.00 38.28 3.93
228 229 2.897350 GCATGACTGGCGGGCTAC 60.897 66.667 0.00 0.00 0.00 3.58
229 230 2.584064 CATGACTGGCGGGCTACA 59.416 61.111 0.00 0.94 0.00 2.74
230 231 1.146930 CATGACTGGCGGGCTACAT 59.853 57.895 0.00 3.30 0.00 2.29
231 232 0.882042 CATGACTGGCGGGCTACATC 60.882 60.000 0.00 0.00 0.00 3.06
232 233 1.337384 ATGACTGGCGGGCTACATCA 61.337 55.000 0.00 1.89 0.00 3.07
233 234 1.521681 GACTGGCGGGCTACATCAC 60.522 63.158 2.38 0.00 0.00 3.06
234 235 2.238847 GACTGGCGGGCTACATCACA 62.239 60.000 2.38 0.00 0.00 3.58
235 236 1.078497 CTGGCGGGCTACATCACAA 60.078 57.895 2.38 0.00 0.00 3.33
236 237 0.676466 CTGGCGGGCTACATCACAAA 60.676 55.000 2.38 0.00 0.00 2.83
237 238 0.958382 TGGCGGGCTACATCACAAAC 60.958 55.000 2.38 0.00 0.00 2.93
238 239 1.423845 GCGGGCTACATCACAAACG 59.576 57.895 0.00 0.00 0.00 3.60
239 240 1.977594 GCGGGCTACATCACAAACGG 61.978 60.000 0.00 0.00 0.00 4.44
240 241 0.672401 CGGGCTACATCACAAACGGT 60.672 55.000 0.00 0.00 0.00 4.83
264 265 5.703876 GAGACAACTCAACAATGAAATCCC 58.296 41.667 0.00 0.00 42.21 3.85
265 266 4.216257 AGACAACTCAACAATGAAATCCCG 59.784 41.667 0.00 0.00 34.49 5.14
266 267 3.888930 ACAACTCAACAATGAAATCCCGT 59.111 39.130 0.00 0.00 34.49 5.28
267 268 4.023193 ACAACTCAACAATGAAATCCCGTC 60.023 41.667 0.00 0.00 34.49 4.79
268 269 3.750371 ACTCAACAATGAAATCCCGTCA 58.250 40.909 0.00 0.00 34.49 4.35
269 270 4.141287 ACTCAACAATGAAATCCCGTCAA 58.859 39.130 0.00 0.00 34.49 3.18
270 271 4.766891 ACTCAACAATGAAATCCCGTCAAT 59.233 37.500 0.00 0.00 34.49 2.57
271 272 5.106157 ACTCAACAATGAAATCCCGTCAATC 60.106 40.000 0.00 0.00 34.49 2.67
272 273 4.097714 CAACAATGAAATCCCGTCAATCG 58.902 43.478 0.00 0.00 39.52 3.34
273 274 2.097466 ACAATGAAATCCCGTCAATCGC 59.903 45.455 0.00 0.00 38.35 4.58
274 275 2.332063 ATGAAATCCCGTCAATCGCT 57.668 45.000 0.00 0.00 38.35 4.93
275 276 1.368641 TGAAATCCCGTCAATCGCTG 58.631 50.000 0.00 0.00 38.35 5.18
276 277 1.338674 TGAAATCCCGTCAATCGCTGT 60.339 47.619 0.00 0.00 38.35 4.40
277 278 1.737793 GAAATCCCGTCAATCGCTGTT 59.262 47.619 0.00 0.00 38.35 3.16
278 279 1.369625 AATCCCGTCAATCGCTGTTC 58.630 50.000 0.00 0.00 38.35 3.18
279 280 0.249120 ATCCCGTCAATCGCTGTTCA 59.751 50.000 0.00 0.00 38.35 3.18
280 281 0.389817 TCCCGTCAATCGCTGTTCAG 60.390 55.000 0.00 0.00 38.35 3.02
281 282 1.421485 CCGTCAATCGCTGTTCAGC 59.579 57.895 13.97 13.97 38.35 4.26
282 283 1.421485 CGTCAATCGCTGTTCAGCC 59.579 57.895 17.42 3.41 0.00 4.85
283 284 1.291184 CGTCAATCGCTGTTCAGCCA 61.291 55.000 17.42 6.88 0.00 4.75
284 285 0.874390 GTCAATCGCTGTTCAGCCAA 59.126 50.000 17.42 7.87 0.00 4.52
285 286 0.874390 TCAATCGCTGTTCAGCCAAC 59.126 50.000 17.42 0.00 35.28 3.77
286 287 0.592637 CAATCGCTGTTCAGCCAACA 59.407 50.000 17.42 0.00 43.12 3.33
287 288 1.001487 CAATCGCTGTTCAGCCAACAA 60.001 47.619 17.42 1.25 44.71 2.83
288 289 1.538047 ATCGCTGTTCAGCCAACAAT 58.462 45.000 17.42 3.26 44.71 2.71
289 290 0.592637 TCGCTGTTCAGCCAACAATG 59.407 50.000 17.42 3.77 44.71 2.82
290 291 0.592637 CGCTGTTCAGCCAACAATGA 59.407 50.000 17.42 0.00 44.71 2.57
291 292 1.001487 CGCTGTTCAGCCAACAATGAA 60.001 47.619 17.42 0.00 44.71 2.57
292 293 2.543445 CGCTGTTCAGCCAACAATGAAA 60.543 45.455 17.42 0.00 44.71 2.69
293 294 3.054878 GCTGTTCAGCCAACAATGAAAG 58.945 45.455 13.11 0.00 44.71 2.62
294 295 3.243501 GCTGTTCAGCCAACAATGAAAGA 60.244 43.478 13.11 0.00 44.71 2.52
295 296 4.737352 GCTGTTCAGCCAACAATGAAAGAA 60.737 41.667 13.11 0.00 44.71 2.52
296 297 5.336150 TGTTCAGCCAACAATGAAAGAAA 57.664 34.783 0.00 0.00 42.35 2.52
297 298 5.728471 TGTTCAGCCAACAATGAAAGAAAA 58.272 33.333 0.00 0.00 42.35 2.29
298 299 5.811613 TGTTCAGCCAACAATGAAAGAAAAG 59.188 36.000 0.00 0.00 42.35 2.27
299 300 5.850557 TCAGCCAACAATGAAAGAAAAGA 57.149 34.783 0.00 0.00 0.00 2.52
300 301 6.409524 TCAGCCAACAATGAAAGAAAAGAT 57.590 33.333 0.00 0.00 0.00 2.40
301 302 6.218019 TCAGCCAACAATGAAAGAAAAGATG 58.782 36.000 0.00 0.00 0.00 2.90
302 303 5.407387 CAGCCAACAATGAAAGAAAAGATGG 59.593 40.000 0.00 0.00 0.00 3.51
303 304 5.305128 AGCCAACAATGAAAGAAAAGATGGA 59.695 36.000 0.00 0.00 0.00 3.41
304 305 6.013984 AGCCAACAATGAAAGAAAAGATGGAT 60.014 34.615 0.00 0.00 0.00 3.41
305 306 6.091713 GCCAACAATGAAAGAAAAGATGGATG 59.908 38.462 0.00 0.00 0.00 3.51
306 307 6.592607 CCAACAATGAAAGAAAAGATGGATGG 59.407 38.462 0.00 0.00 0.00 3.51
307 308 6.923199 ACAATGAAAGAAAAGATGGATGGT 57.077 33.333 0.00 0.00 0.00 3.55
308 309 6.694447 ACAATGAAAGAAAAGATGGATGGTG 58.306 36.000 0.00 0.00 0.00 4.17
309 310 5.927281 ATGAAAGAAAAGATGGATGGTGG 57.073 39.130 0.00 0.00 0.00 4.61
310 311 4.088634 TGAAAGAAAAGATGGATGGTGGG 58.911 43.478 0.00 0.00 0.00 4.61
311 312 3.833559 AAGAAAAGATGGATGGTGGGT 57.166 42.857 0.00 0.00 0.00 4.51
312 313 3.833559 AGAAAAGATGGATGGTGGGTT 57.166 42.857 0.00 0.00 0.00 4.11
313 314 4.132122 AGAAAAGATGGATGGTGGGTTT 57.868 40.909 0.00 0.00 0.00 3.27
314 315 4.492646 AGAAAAGATGGATGGTGGGTTTT 58.507 39.130 0.00 0.00 0.00 2.43
315 316 4.907269 AGAAAAGATGGATGGTGGGTTTTT 59.093 37.500 0.00 0.00 0.00 1.94
316 317 4.622260 AAAGATGGATGGTGGGTTTTTG 57.378 40.909 0.00 0.00 0.00 2.44
317 318 1.901833 AGATGGATGGTGGGTTTTTGC 59.098 47.619 0.00 0.00 0.00 3.68
318 319 0.607620 ATGGATGGTGGGTTTTTGCG 59.392 50.000 0.00 0.00 0.00 4.85
319 320 0.468214 TGGATGGTGGGTTTTTGCGA 60.468 50.000 0.00 0.00 0.00 5.10
320 321 0.894835 GGATGGTGGGTTTTTGCGAT 59.105 50.000 0.00 0.00 0.00 4.58
321 322 1.275010 GGATGGTGGGTTTTTGCGATT 59.725 47.619 0.00 0.00 0.00 3.34
322 323 2.289382 GGATGGTGGGTTTTTGCGATTT 60.289 45.455 0.00 0.00 0.00 2.17
323 324 3.056465 GGATGGTGGGTTTTTGCGATTTA 60.056 43.478 0.00 0.00 0.00 1.40
324 325 3.372660 TGGTGGGTTTTTGCGATTTAC 57.627 42.857 0.00 0.00 0.00 2.01
325 326 2.959707 TGGTGGGTTTTTGCGATTTACT 59.040 40.909 0.00 0.00 0.00 2.24
326 327 3.004944 TGGTGGGTTTTTGCGATTTACTC 59.995 43.478 0.00 0.00 0.00 2.59
327 328 3.571571 GTGGGTTTTTGCGATTTACTCC 58.428 45.455 0.00 0.00 0.00 3.85
328 329 2.226912 TGGGTTTTTGCGATTTACTCCG 59.773 45.455 0.00 0.00 0.00 4.63
329 330 2.485038 GGGTTTTTGCGATTTACTCCGA 59.515 45.455 0.00 0.00 0.00 4.55
330 331 3.128068 GGGTTTTTGCGATTTACTCCGAT 59.872 43.478 0.00 0.00 0.00 4.18
331 332 4.095610 GGTTTTTGCGATTTACTCCGATG 58.904 43.478 0.00 0.00 0.00 3.84
332 333 3.398954 TTTTGCGATTTACTCCGATGC 57.601 42.857 0.00 0.00 0.00 3.91
333 334 0.927537 TTGCGATTTACTCCGATGCG 59.072 50.000 0.00 0.00 0.00 4.73
334 335 1.201825 GCGATTTACTCCGATGCGC 59.798 57.895 0.00 0.00 36.12 6.09
335 336 1.487452 GCGATTTACTCCGATGCGCA 61.487 55.000 14.96 14.96 42.21 6.09
336 337 0.927537 CGATTTACTCCGATGCGCAA 59.072 50.000 17.11 0.00 0.00 4.85
337 338 1.332028 CGATTTACTCCGATGCGCAAC 60.332 52.381 17.11 11.95 0.00 4.17
338 339 1.663643 GATTTACTCCGATGCGCAACA 59.336 47.619 17.11 0.00 0.00 3.33
339 340 1.514003 TTTACTCCGATGCGCAACAA 58.486 45.000 17.11 1.24 0.00 2.83
340 341 1.075542 TTACTCCGATGCGCAACAAG 58.924 50.000 17.11 14.68 0.00 3.16
341 342 1.358725 TACTCCGATGCGCAACAAGC 61.359 55.000 17.11 0.36 40.87 4.01
347 348 3.519202 TGCGCAACAAGCAAAGGA 58.481 50.000 8.16 0.00 46.13 3.36
348 349 1.812525 TGCGCAACAAGCAAAGGAA 59.187 47.368 8.16 0.00 46.13 3.36
349 350 0.174389 TGCGCAACAAGCAAAGGAAA 59.826 45.000 8.16 0.00 46.13 3.13
350 351 0.854705 GCGCAACAAGCAAAGGAAAG 59.145 50.000 0.30 0.00 46.13 2.62
351 352 1.802508 GCGCAACAAGCAAAGGAAAGT 60.803 47.619 0.30 0.00 46.13 2.66
352 353 2.542824 GCGCAACAAGCAAAGGAAAGTA 60.543 45.455 0.30 0.00 46.13 2.24
353 354 3.042887 CGCAACAAGCAAAGGAAAGTAC 58.957 45.455 0.00 0.00 46.13 2.73
354 355 3.488384 CGCAACAAGCAAAGGAAAGTACA 60.488 43.478 0.00 0.00 46.13 2.90
355 356 3.796717 GCAACAAGCAAAGGAAAGTACAC 59.203 43.478 0.00 0.00 44.79 2.90
356 357 3.963383 ACAAGCAAAGGAAAGTACACG 57.037 42.857 0.00 0.00 0.00 4.49
357 358 3.275999 ACAAGCAAAGGAAAGTACACGT 58.724 40.909 0.00 0.00 0.00 4.49
358 359 3.064820 ACAAGCAAAGGAAAGTACACGTG 59.935 43.478 15.48 15.48 0.00 4.49
359 360 1.602377 AGCAAAGGAAAGTACACGTGC 59.398 47.619 17.22 0.00 0.00 5.34
360 361 1.334689 GCAAAGGAAAGTACACGTGCC 60.335 52.381 17.22 7.55 0.00 5.01
361 362 1.070175 CAAAGGAAAGTACACGTGCCG 60.070 52.381 17.22 0.00 0.00 5.69
362 363 0.105408 AAGGAAAGTACACGTGCCGT 59.895 50.000 17.22 2.61 42.36 5.68
376 377 5.921004 ACGTGCCGTGTAAAAACTATAAA 57.079 34.783 0.00 0.00 39.18 1.40
377 378 6.297694 ACGTGCCGTGTAAAAACTATAAAA 57.702 33.333 0.00 0.00 39.18 1.52
378 379 6.723282 ACGTGCCGTGTAAAAACTATAAAAA 58.277 32.000 0.00 0.00 39.18 1.94
379 380 6.632434 ACGTGCCGTGTAAAAACTATAAAAAC 59.368 34.615 0.00 0.00 39.18 2.43
380 381 6.852345 CGTGCCGTGTAAAAACTATAAAAACT 59.148 34.615 0.00 0.00 0.00 2.66
381 382 7.149256 CGTGCCGTGTAAAAACTATAAAAACTG 60.149 37.037 0.00 0.00 0.00 3.16
382 383 7.856894 GTGCCGTGTAAAAACTATAAAAACTGA 59.143 33.333 0.00 0.00 0.00 3.41
383 384 8.569641 TGCCGTGTAAAAACTATAAAAACTGAT 58.430 29.630 0.00 0.00 0.00 2.90
384 385 9.058424 GCCGTGTAAAAACTATAAAAACTGATC 57.942 33.333 0.00 0.00 0.00 2.92
391 392 9.503399 AAAAACTATAAAAACTGATCTCTCCGT 57.497 29.630 0.00 0.00 0.00 4.69
392 393 8.705048 AAACTATAAAAACTGATCTCTCCGTC 57.295 34.615 0.00 0.00 0.00 4.79
393 394 7.648039 ACTATAAAAACTGATCTCTCCGTCT 57.352 36.000 0.00 0.00 0.00 4.18
394 395 7.708998 ACTATAAAAACTGATCTCTCCGTCTC 58.291 38.462 0.00 0.00 0.00 3.36
395 396 4.873746 AAAAACTGATCTCTCCGTCTCA 57.126 40.909 0.00 0.00 0.00 3.27
396 397 4.873746 AAAACTGATCTCTCCGTCTCAA 57.126 40.909 0.00 0.00 0.00 3.02
397 398 4.873746 AAACTGATCTCTCCGTCTCAAA 57.126 40.909 0.00 0.00 0.00 2.69
398 399 4.873746 AACTGATCTCTCCGTCTCAAAA 57.126 40.909 0.00 0.00 0.00 2.44
399 400 5.413309 AACTGATCTCTCCGTCTCAAAAT 57.587 39.130 0.00 0.00 0.00 1.82
400 401 6.531503 AACTGATCTCTCCGTCTCAAAATA 57.468 37.500 0.00 0.00 0.00 1.40
401 402 6.531503 ACTGATCTCTCCGTCTCAAAATAA 57.468 37.500 0.00 0.00 0.00 1.40
402 403 6.568869 ACTGATCTCTCCGTCTCAAAATAAG 58.431 40.000 0.00 0.00 0.00 1.73
403 404 6.153680 ACTGATCTCTCCGTCTCAAAATAAGT 59.846 38.462 0.00 0.00 0.00 2.24
404 405 6.333416 TGATCTCTCCGTCTCAAAATAAGTG 58.667 40.000 0.00 0.00 0.00 3.16
405 406 5.723672 TCTCTCCGTCTCAAAATAAGTGT 57.276 39.130 0.00 0.00 0.00 3.55
406 407 5.710984 TCTCTCCGTCTCAAAATAAGTGTC 58.289 41.667 0.00 0.00 0.00 3.67
407 408 4.482386 TCTCCGTCTCAAAATAAGTGTCG 58.518 43.478 0.00 0.00 0.00 4.35
408 409 4.022589 TCTCCGTCTCAAAATAAGTGTCGT 60.023 41.667 0.00 0.00 0.00 4.34
409 410 4.624015 TCCGTCTCAAAATAAGTGTCGTT 58.376 39.130 0.00 0.00 0.00 3.85
410 411 4.446385 TCCGTCTCAAAATAAGTGTCGTTG 59.554 41.667 0.00 0.00 0.00 4.10
411 412 4.446385 CCGTCTCAAAATAAGTGTCGTTGA 59.554 41.667 0.00 0.00 0.00 3.18
412 413 5.120208 CCGTCTCAAAATAAGTGTCGTTGAT 59.880 40.000 0.00 0.00 0.00 2.57
413 414 6.347402 CCGTCTCAAAATAAGTGTCGTTGATT 60.347 38.462 0.00 0.00 0.00 2.57
414 415 7.069569 CGTCTCAAAATAAGTGTCGTTGATTT 58.930 34.615 0.00 0.00 0.00 2.17
415 416 8.218441 CGTCTCAAAATAAGTGTCGTTGATTTA 58.782 33.333 0.00 0.00 0.00 1.40
416 417 9.872757 GTCTCAAAATAAGTGTCGTTGATTTAA 57.127 29.630 0.00 0.00 0.00 1.52
467 468 9.694520 CTAATCAGTGACATTTATTTTGAGACG 57.305 33.333 0.00 0.00 0.00 4.18
468 469 7.905604 ATCAGTGACATTTATTTTGAGACGA 57.094 32.000 0.00 0.00 0.00 4.20
469 470 7.722795 TCAGTGACATTTATTTTGAGACGAA 57.277 32.000 0.00 0.00 0.00 3.85
470 471 7.796838 TCAGTGACATTTATTTTGAGACGAAG 58.203 34.615 0.00 0.00 0.00 3.79
471 472 7.655732 TCAGTGACATTTATTTTGAGACGAAGA 59.344 33.333 0.00 0.00 0.00 2.87
472 473 8.282592 CAGTGACATTTATTTTGAGACGAAGAA 58.717 33.333 0.00 0.00 0.00 2.52
473 474 8.836413 AGTGACATTTATTTTGAGACGAAGAAA 58.164 29.630 0.00 0.00 0.00 2.52
474 475 9.445786 GTGACATTTATTTTGAGACGAAGAAAA 57.554 29.630 0.00 0.00 0.00 2.29
481 482 9.801714 TTATTTTGAGACGAAGAAAATACGAAC 57.198 29.630 0.00 0.00 33.41 3.95
482 483 5.834239 TTGAGACGAAGAAAATACGAACC 57.166 39.130 0.00 0.00 0.00 3.62
483 484 4.873817 TGAGACGAAGAAAATACGAACCA 58.126 39.130 0.00 0.00 0.00 3.67
484 485 4.921515 TGAGACGAAGAAAATACGAACCAG 59.078 41.667 0.00 0.00 0.00 4.00
485 486 5.130292 AGACGAAGAAAATACGAACCAGA 57.870 39.130 0.00 0.00 0.00 3.86
486 487 4.922103 AGACGAAGAAAATACGAACCAGAC 59.078 41.667 0.00 0.00 0.00 3.51
487 488 3.671928 ACGAAGAAAATACGAACCAGACG 59.328 43.478 0.00 0.00 0.00 4.18
488 489 3.481467 CGAAGAAAATACGAACCAGACGC 60.481 47.826 0.00 0.00 0.00 5.19
489 490 3.034721 AGAAAATACGAACCAGACGCA 57.965 42.857 0.00 0.00 0.00 5.24
490 491 2.993899 AGAAAATACGAACCAGACGCAG 59.006 45.455 0.00 0.00 0.00 5.18
510 511 7.285788 ACGCAGTAATAAAGAGTTAAAACACG 58.714 34.615 0.00 0.00 41.94 4.49
511 512 7.042523 ACGCAGTAATAAAGAGTTAAAACACGT 60.043 33.333 0.00 0.00 41.94 4.49
512 513 7.473411 CGCAGTAATAAAGAGTTAAAACACGTC 59.527 37.037 0.00 0.00 0.00 4.34
513 514 8.493547 GCAGTAATAAAGAGTTAAAACACGTCT 58.506 33.333 0.00 0.00 0.00 4.18
515 516 9.201127 AGTAATAAAGAGTTAAAACACGTCTCC 57.799 33.333 0.00 0.00 0.00 3.71
516 517 8.981647 GTAATAAAGAGTTAAAACACGTCTCCA 58.018 33.333 0.00 0.00 0.00 3.86
517 518 8.617290 AATAAAGAGTTAAAACACGTCTCCAT 57.383 30.769 0.00 0.00 0.00 3.41
518 519 6.541111 AAAGAGTTAAAACACGTCTCCATC 57.459 37.500 0.00 0.00 0.00 3.51
519 520 5.209818 AGAGTTAAAACACGTCTCCATCA 57.790 39.130 0.00 0.00 0.00 3.07
520 521 5.230942 AGAGTTAAAACACGTCTCCATCAG 58.769 41.667 0.00 0.00 0.00 2.90
521 522 3.746492 AGTTAAAACACGTCTCCATCAGC 59.254 43.478 0.00 0.00 0.00 4.26
522 523 2.254546 AAAACACGTCTCCATCAGCA 57.745 45.000 0.00 0.00 0.00 4.41
523 524 1.800805 AAACACGTCTCCATCAGCAG 58.199 50.000 0.00 0.00 0.00 4.24
524 525 0.681733 AACACGTCTCCATCAGCAGT 59.318 50.000 0.00 0.00 0.00 4.40
525 526 0.681733 ACACGTCTCCATCAGCAGTT 59.318 50.000 0.00 0.00 0.00 3.16
526 527 1.893137 ACACGTCTCCATCAGCAGTTA 59.107 47.619 0.00 0.00 0.00 2.24
527 528 2.263077 CACGTCTCCATCAGCAGTTAC 58.737 52.381 0.00 0.00 0.00 2.50
528 529 2.094494 CACGTCTCCATCAGCAGTTACT 60.094 50.000 0.00 0.00 0.00 2.24
529 530 3.128764 CACGTCTCCATCAGCAGTTACTA 59.871 47.826 0.00 0.00 0.00 1.82
530 531 3.378742 ACGTCTCCATCAGCAGTTACTAG 59.621 47.826 0.00 0.00 0.00 2.57
531 532 3.712187 GTCTCCATCAGCAGTTACTAGC 58.288 50.000 0.00 0.00 0.00 3.42
532 533 3.383185 GTCTCCATCAGCAGTTACTAGCT 59.617 47.826 0.00 0.00 42.94 3.32
558 559 1.731720 GCCAGAAGCGAGATCTTTGT 58.268 50.000 0.00 0.00 0.00 2.83
559 560 2.079925 GCCAGAAGCGAGATCTTTGTT 58.920 47.619 0.00 0.00 0.00 2.83
560 561 2.485814 GCCAGAAGCGAGATCTTTGTTT 59.514 45.455 0.00 0.00 0.00 2.83
561 562 3.425492 GCCAGAAGCGAGATCTTTGTTTC 60.425 47.826 13.90 13.90 32.22 2.78
562 563 3.748048 CCAGAAGCGAGATCTTTGTTTCA 59.252 43.478 19.99 0.00 33.95 2.69
563 564 4.142945 CCAGAAGCGAGATCTTTGTTTCAG 60.143 45.833 19.99 14.73 33.95 3.02
564 565 4.687948 CAGAAGCGAGATCTTTGTTTCAGA 59.312 41.667 19.99 0.00 33.95 3.27
565 566 4.688413 AGAAGCGAGATCTTTGTTTCAGAC 59.312 41.667 19.99 2.82 33.95 3.51
566 567 3.995199 AGCGAGATCTTTGTTTCAGACA 58.005 40.909 0.00 0.00 36.19 3.41
567 568 3.743396 AGCGAGATCTTTGTTTCAGACAC 59.257 43.478 0.00 0.00 38.18 3.67
568 569 3.494626 GCGAGATCTTTGTTTCAGACACA 59.505 43.478 0.00 0.00 38.18 3.72
569 570 4.024893 GCGAGATCTTTGTTTCAGACACAA 60.025 41.667 0.00 0.00 38.18 3.33
570 571 5.435557 CGAGATCTTTGTTTCAGACACAAC 58.564 41.667 1.38 0.00 38.18 3.32
571 572 5.559035 CGAGATCTTTGTTTCAGACACAACC 60.559 44.000 1.38 0.00 38.18 3.77
572 573 5.440610 AGATCTTTGTTTCAGACACAACCT 58.559 37.500 1.38 0.00 38.18 3.50
573 574 5.529060 AGATCTTTGTTTCAGACACAACCTC 59.471 40.000 1.38 0.56 38.18 3.85
574 575 4.843728 TCTTTGTTTCAGACACAACCTCT 58.156 39.130 1.38 0.00 38.18 3.69
575 576 4.635765 TCTTTGTTTCAGACACAACCTCTG 59.364 41.667 1.38 0.00 38.18 3.35
576 577 2.288666 TGTTTCAGACACAACCTCTGC 58.711 47.619 0.00 0.00 35.95 4.26
577 578 1.604278 GTTTCAGACACAACCTCTGCC 59.396 52.381 0.00 0.00 35.95 4.85
578 579 0.249868 TTCAGACACAACCTCTGCCG 60.250 55.000 0.00 0.00 35.95 5.69
579 580 2.031163 AGACACAACCTCTGCCGC 59.969 61.111 0.00 0.00 0.00 6.53
580 581 3.414700 GACACAACCTCTGCCGCG 61.415 66.667 0.00 0.00 0.00 6.46
581 582 4.988598 ACACAACCTCTGCCGCGG 62.989 66.667 24.05 24.05 0.00 6.46
592 593 3.747976 GCCGCGGCAAAATCTGGT 61.748 61.111 43.55 0.00 41.49 4.00
593 594 2.961768 CCGCGGCAAAATCTGGTT 59.038 55.556 14.67 0.00 0.00 3.67
618 619 0.040781 GAAGCGGTAAAACTTGCGCA 60.041 50.000 5.66 5.66 30.59 6.09
915 928 1.208293 CTTTCTCCCTAGCCACCACTC 59.792 57.143 0.00 0.00 0.00 3.51
916 929 0.116342 TTCTCCCTAGCCACCACTCA 59.884 55.000 0.00 0.00 0.00 3.41
917 930 0.614979 TCTCCCTAGCCACCACTCAC 60.615 60.000 0.00 0.00 0.00 3.51
922 935 0.247736 CTAGCCACCACTCACCACTC 59.752 60.000 0.00 0.00 0.00 3.51
923 936 1.532604 TAGCCACCACTCACCACTCG 61.533 60.000 0.00 0.00 0.00 4.18
924 937 2.343758 CCACCACTCACCACTCGG 59.656 66.667 0.00 0.00 38.77 4.63
925 938 2.207229 CCACCACTCACCACTCGGA 61.207 63.158 0.00 0.00 35.59 4.55
926 939 1.290324 CACCACTCACCACTCGGAG 59.710 63.158 2.83 2.83 37.18 4.63
927 940 2.262915 CCACTCACCACTCGGAGC 59.737 66.667 4.58 0.00 34.48 4.70
928 941 2.126307 CACTCACCACTCGGAGCG 60.126 66.667 4.58 0.00 34.48 5.03
929 942 2.282251 ACTCACCACTCGGAGCGA 60.282 61.111 4.58 0.00 34.48 4.93
930 943 1.679305 ACTCACCACTCGGAGCGAT 60.679 57.895 4.58 0.00 34.61 4.58
931 944 0.393944 ACTCACCACTCGGAGCGATA 60.394 55.000 4.58 0.00 34.61 2.92
932 945 0.309302 CTCACCACTCGGAGCGATAG 59.691 60.000 4.58 0.00 34.61 2.08
971 984 0.723790 CGACGAAGCAAAGCAAGCAG 60.724 55.000 0.00 0.00 0.00 4.24
972 985 1.000736 GACGAAGCAAAGCAAGCAGC 61.001 55.000 0.00 0.00 46.19 5.25
1053 1066 4.746309 GGCAGCATGGTGGAGGCA 62.746 66.667 25.24 0.00 35.86 4.75
1159 1172 3.636231 CCAAGCCAGGTCCGTCCA 61.636 66.667 0.00 0.00 39.02 4.02
1179 1195 2.272447 CCCCCGTGCGAAACCATTT 61.272 57.895 0.00 0.00 0.00 2.32
1180 1196 1.663173 CCCCGTGCGAAACCATTTT 59.337 52.632 0.00 0.00 0.00 1.82
1181 1197 0.032815 CCCCGTGCGAAACCATTTTT 59.967 50.000 0.00 0.00 0.00 1.94
1182 1198 1.269998 CCCCGTGCGAAACCATTTTTA 59.730 47.619 0.00 0.00 0.00 1.52
1183 1199 2.591133 CCCGTGCGAAACCATTTTTAG 58.409 47.619 0.00 0.00 0.00 1.85
1184 1200 1.982913 CCGTGCGAAACCATTTTTAGC 59.017 47.619 0.00 0.00 32.47 3.09
1185 1201 2.351350 CCGTGCGAAACCATTTTTAGCT 60.351 45.455 0.00 0.00 32.82 3.32
1186 1202 3.120130 CCGTGCGAAACCATTTTTAGCTA 60.120 43.478 0.00 0.00 32.82 3.32
1187 1203 3.844099 CGTGCGAAACCATTTTTAGCTAC 59.156 43.478 0.00 1.07 32.82 3.58
1188 1204 4.611807 CGTGCGAAACCATTTTTAGCTACA 60.612 41.667 0.00 0.00 32.82 2.74
1189 1205 4.615541 GTGCGAAACCATTTTTAGCTACAC 59.384 41.667 0.00 0.00 32.82 2.90
1190 1206 4.276183 TGCGAAACCATTTTTAGCTACACA 59.724 37.500 0.00 0.00 32.82 3.72
1191 1207 4.615541 GCGAAACCATTTTTAGCTACACAC 59.384 41.667 0.00 0.00 0.00 3.82
1192 1208 4.843984 CGAAACCATTTTTAGCTACACACG 59.156 41.667 0.00 0.00 0.00 4.49
1193 1209 3.824414 ACCATTTTTAGCTACACACGC 57.176 42.857 0.00 0.00 0.00 5.34
1194 1210 3.408634 ACCATTTTTAGCTACACACGCT 58.591 40.909 0.00 0.00 41.35 5.07
1195 1211 3.188460 ACCATTTTTAGCTACACACGCTG 59.812 43.478 0.00 0.00 38.38 5.18
1196 1212 3.426159 CCATTTTTAGCTACACACGCTGG 60.426 47.826 0.00 0.00 38.38 4.85
1197 1213 1.803334 TTTTAGCTACACACGCTGGG 58.197 50.000 0.00 0.00 38.38 4.45
1198 1214 0.036765 TTTAGCTACACACGCTGGGG 60.037 55.000 0.00 0.00 38.38 4.96
1199 1215 0.901114 TTAGCTACACACGCTGGGGA 60.901 55.000 0.00 0.00 38.38 4.81
1200 1216 1.320344 TAGCTACACACGCTGGGGAG 61.320 60.000 0.00 0.00 38.38 4.30
1210 1226 2.957006 CACGCTGGGGAGTACTACTAAT 59.043 50.000 4.77 0.00 0.00 1.73
1212 1228 3.383825 ACGCTGGGGAGTACTACTAATTG 59.616 47.826 4.77 0.00 0.00 2.32
1218 1234 4.202090 GGGGAGTACTACTAATTGACCACG 60.202 50.000 4.77 0.00 0.00 4.94
1220 1236 4.025015 AGTACTACTAATTGACCACGCG 57.975 45.455 3.53 3.53 0.00 6.01
1222 1238 1.067425 ACTACTAATTGACCACGCGCA 60.067 47.619 5.73 0.00 0.00 6.09
1224 1240 2.303163 ACTAATTGACCACGCGCATA 57.697 45.000 5.73 0.00 0.00 3.14
1227 1243 2.303163 AATTGACCACGCGCATACTA 57.697 45.000 5.73 0.00 0.00 1.82
1228 1244 1.852942 ATTGACCACGCGCATACTAG 58.147 50.000 5.73 0.00 0.00 2.57
1229 1245 0.804544 TTGACCACGCGCATACTAGC 60.805 55.000 5.73 0.00 0.00 3.42
1231 1247 1.209275 GACCACGCGCATACTAGCTG 61.209 60.000 5.73 0.00 0.00 4.24
1232 1248 1.065764 CCACGCGCATACTAGCTGA 59.934 57.895 5.73 0.00 0.00 4.26
1233 1249 0.936764 CCACGCGCATACTAGCTGAG 60.937 60.000 5.73 0.00 0.00 3.35
1235 1251 1.002792 CACGCGCATACTAGCTGAGTA 60.003 52.381 5.73 0.83 44.87 2.59
1236 1252 1.264557 ACGCGCATACTAGCTGAGTAG 59.735 52.381 5.73 0.00 43.99 2.57
1247 1263 1.468985 GCTGAGTAGCTGACTGAGGA 58.531 55.000 0.00 0.00 46.57 3.71
1248 1264 2.031120 GCTGAGTAGCTGACTGAGGAT 58.969 52.381 0.00 0.00 46.57 3.24
1249 1265 2.034558 GCTGAGTAGCTGACTGAGGATC 59.965 54.545 0.00 0.00 46.57 3.36
1250 1266 2.290367 CTGAGTAGCTGACTGAGGATCG 59.710 54.545 0.00 0.00 39.06 3.69
1251 1267 2.294074 GAGTAGCTGACTGAGGATCGT 58.706 52.381 0.00 0.00 39.06 3.73
1252 1268 2.020720 AGTAGCTGACTGAGGATCGTG 58.979 52.381 0.00 0.00 38.61 4.35
1253 1269 1.746220 GTAGCTGACTGAGGATCGTGT 59.254 52.381 0.00 0.00 38.61 4.49
1254 1270 0.814457 AGCTGACTGAGGATCGTGTC 59.186 55.000 0.00 0.00 40.17 3.67
1255 1271 0.814457 GCTGACTGAGGATCGTGTCT 59.186 55.000 0.00 0.00 40.33 3.41
1256 1272 1.468908 GCTGACTGAGGATCGTGTCTG 60.469 57.143 0.00 0.94 40.33 3.51
1392 1434 1.153429 GGCCGTCGCAGGTAAGATT 60.153 57.895 0.00 0.00 36.38 2.40
1424 1484 2.625314 TCCGCTCTCTAGTCAATCATGG 59.375 50.000 0.00 0.00 0.00 3.66
1494 1566 2.580589 CCGTGCGTCTTTGTTTAATGG 58.419 47.619 0.00 0.00 0.00 3.16
1500 1572 2.595386 GTCTTTGTTTAATGGCGCTGG 58.405 47.619 7.64 0.00 0.00 4.85
1543 1615 2.483714 CGCTGGTGCTGTGGAATATACT 60.484 50.000 0.00 0.00 36.97 2.12
1544 1616 3.243737 CGCTGGTGCTGTGGAATATACTA 60.244 47.826 0.00 0.00 36.97 1.82
1550 1622 2.925306 GCTGTGGAATATACTACCGCCG 60.925 54.545 0.00 0.00 33.84 6.46
1551 1623 1.000060 TGTGGAATATACTACCGCCGC 60.000 52.381 0.00 0.00 33.84 6.53
1552 1624 0.604578 TGGAATATACTACCGCCGCC 59.395 55.000 0.00 0.00 0.00 6.13
1553 1625 0.457337 GGAATATACTACCGCCGCCG 60.457 60.000 0.00 0.00 0.00 6.46
1572 1654 2.439104 GCCAGGCCTGCTACTAGCT 61.439 63.158 28.39 0.00 42.97 3.32
1712 1794 6.426937 TGTTTTCAGATAACAGAACAGTAGCC 59.573 38.462 2.53 0.00 32.15 3.93
1720 1802 0.170561 AGAACAGTAGCCGCAGTACG 59.829 55.000 0.00 0.00 43.15 3.67
1736 1824 4.677250 GCAGTACGAGGTAGCAACAGTATT 60.677 45.833 0.00 0.00 0.00 1.89
1748 1836 0.526739 ACAGTATTGATACGCGCGCA 60.527 50.000 32.58 20.08 38.28 6.09
1812 1930 1.065564 GGTCCAGAGAGCAGAGCAATT 60.066 52.381 0.00 0.00 40.37 2.32
1814 1932 3.194062 GTCCAGAGAGCAGAGCAATTAC 58.806 50.000 0.00 0.00 0.00 1.89
1848 1966 3.121030 CGCCACGCTGGGAAGAAG 61.121 66.667 0.00 0.00 38.19 2.85
1849 1967 2.347490 GCCACGCTGGGAAGAAGA 59.653 61.111 0.00 0.00 38.19 2.87
1850 1968 1.743252 GCCACGCTGGGAAGAAGAG 60.743 63.158 0.00 0.00 38.19 2.85
1890 2008 2.575532 TGGATGGATCGAAGCCAATTC 58.424 47.619 13.51 8.19 39.21 2.17
1893 2011 3.571401 GGATGGATCGAAGCCAATTCAAT 59.429 43.478 13.51 0.00 39.21 2.57
1894 2012 4.038402 GGATGGATCGAAGCCAATTCAATT 59.962 41.667 13.51 0.00 39.21 2.32
1910 2028 6.690194 ATTCAATTGGAATAGTCTCTGCAC 57.310 37.500 5.42 0.00 44.38 4.57
1986 2104 3.036084 CTGCAGCCGAACGAACGT 61.036 61.111 0.00 0.00 0.00 3.99
1987 2105 3.000080 CTGCAGCCGAACGAACGTC 62.000 63.158 0.00 0.00 0.00 4.34
1989 2107 3.110178 CAGCCGAACGAACGTCCC 61.110 66.667 0.00 0.00 0.00 4.46
1990 2108 4.712425 AGCCGAACGAACGTCCCG 62.712 66.667 8.48 8.48 0.00 5.14
1992 2110 4.041917 CCGAACGAACGTCCCGGA 62.042 66.667 24.85 0.00 42.59 5.14
1993 2111 2.802414 CGAACGAACGTCCCGGAC 60.802 66.667 0.73 7.59 0.00 4.79
2375 2544 3.402628 ACCCTAGCCATGCTAAATACG 57.597 47.619 0.00 0.00 40.82 3.06
2376 2545 2.704065 ACCCTAGCCATGCTAAATACGT 59.296 45.455 0.00 0.00 40.82 3.57
2377 2546 3.899360 ACCCTAGCCATGCTAAATACGTA 59.101 43.478 0.00 0.00 40.82 3.57
2378 2547 4.530946 ACCCTAGCCATGCTAAATACGTAT 59.469 41.667 1.14 1.14 40.82 3.06
2379 2548 5.718130 ACCCTAGCCATGCTAAATACGTATA 59.282 40.000 8.83 0.00 40.82 1.47
2380 2549 6.040878 CCCTAGCCATGCTAAATACGTATAC 58.959 44.000 8.83 0.00 40.82 1.47
2381 2550 5.742453 CCTAGCCATGCTAAATACGTATACG 59.258 44.000 23.24 23.24 40.82 3.06
2382 2551 4.491676 AGCCATGCTAAATACGTATACGG 58.508 43.478 27.62 10.92 39.71 4.02
2383 2552 3.061697 GCCATGCTAAATACGTATACGGC 59.938 47.826 27.62 19.73 44.95 5.68
2384 2553 3.302434 CCATGCTAAATACGTATACGGCG 59.698 47.826 27.62 4.80 44.95 6.46
2385 2554 3.894782 TGCTAAATACGTATACGGCGA 57.105 42.857 27.62 13.77 44.95 5.54
2386 2555 4.221926 TGCTAAATACGTATACGGCGAA 57.778 40.909 27.62 11.54 44.95 4.70
2387 2556 3.974401 TGCTAAATACGTATACGGCGAAC 59.026 43.478 27.62 11.94 44.95 3.95
2427 2601 5.333035 CGGCTGTATGTATTTCGTGGTTATG 60.333 44.000 0.00 0.00 0.00 1.90
2443 2617 4.058817 GGTTATGCCTGCAGTATCTGTAC 58.941 47.826 13.81 1.86 33.43 2.90
2454 2636 4.261405 GCAGTATCTGTACGCTTCTCTGAT 60.261 45.833 0.00 0.00 35.92 2.90
2459 2641 3.759086 TCTGTACGCTTCTCTGATCTGTT 59.241 43.478 0.00 0.00 0.00 3.16
2461 2643 3.506067 TGTACGCTTCTCTGATCTGTTCA 59.494 43.478 0.00 0.00 0.00 3.18
2465 2647 3.931468 CGCTTCTCTGATCTGTTCATGTT 59.069 43.478 0.00 0.00 32.72 2.71
2467 2649 5.752472 CGCTTCTCTGATCTGTTCATGTTAT 59.248 40.000 0.00 0.00 32.72 1.89
2468 2650 6.920210 CGCTTCTCTGATCTGTTCATGTTATA 59.080 38.462 0.00 0.00 32.72 0.98
2470 2652 8.710551 GCTTCTCTGATCTGTTCATGTTATATG 58.289 37.037 0.00 0.00 32.72 1.78
2472 2654 9.755804 TTCTCTGATCTGTTCATGTTATATGAC 57.244 33.333 0.00 0.00 32.72 3.06
2475 2657 8.146412 TCTGATCTGTTCATGTTATATGACTGG 58.854 37.037 0.00 0.00 32.72 4.00
2476 2658 6.707608 TGATCTGTTCATGTTATATGACTGGC 59.292 38.462 0.00 0.00 0.00 4.85
2477 2659 5.988287 TCTGTTCATGTTATATGACTGGCA 58.012 37.500 0.00 0.00 0.00 4.92
2478 2660 6.594744 TCTGTTCATGTTATATGACTGGCAT 58.405 36.000 0.00 0.00 41.08 4.40
2479 2661 6.707608 TCTGTTCATGTTATATGACTGGCATC 59.292 38.462 0.00 0.00 38.44 3.91
2480 2662 6.594744 TGTTCATGTTATATGACTGGCATCT 58.405 36.000 0.00 0.00 38.44 2.90
2481 2663 7.056006 TGTTCATGTTATATGACTGGCATCTT 58.944 34.615 0.00 0.00 38.44 2.40
2593 2780 1.379527 CGGCAAACTCCCAGGTAATC 58.620 55.000 0.00 0.00 0.00 1.75
2594 2781 1.065418 CGGCAAACTCCCAGGTAATCT 60.065 52.381 0.00 0.00 0.00 2.40
2595 2782 2.369394 GGCAAACTCCCAGGTAATCTG 58.631 52.381 0.00 0.00 43.00 2.90
2596 2783 2.026262 GGCAAACTCCCAGGTAATCTGA 60.026 50.000 0.00 0.00 46.18 3.27
2597 2784 3.372025 GGCAAACTCCCAGGTAATCTGAT 60.372 47.826 0.00 0.00 46.18 2.90
2598 2785 3.879892 GCAAACTCCCAGGTAATCTGATC 59.120 47.826 0.00 0.00 46.18 2.92
2599 2786 4.384647 GCAAACTCCCAGGTAATCTGATCT 60.385 45.833 0.00 0.00 46.18 2.75
2600 2787 5.363939 CAAACTCCCAGGTAATCTGATCTC 58.636 45.833 0.00 0.00 46.18 2.75
2601 2788 3.582164 ACTCCCAGGTAATCTGATCTCC 58.418 50.000 0.00 0.00 46.18 3.71
2602 2789 3.051803 ACTCCCAGGTAATCTGATCTCCA 60.052 47.826 11.67 0.00 46.18 3.86
2606 2793 3.312890 CAGGTAATCTGATCTCCACCCT 58.687 50.000 11.67 0.00 46.18 4.34
2613 2800 0.325933 TGATCTCCACCCTGCACTTG 59.674 55.000 0.00 0.00 0.00 3.16
2630 2817 4.024725 GCACTTGCAGATCATTCTCATCTC 60.025 45.833 0.00 0.00 41.59 2.75
2636 2823 4.741235 GCAGATCATTCTCATCTCAGCTGT 60.741 45.833 14.67 0.00 0.00 4.40
2644 2831 1.277273 TCATCTCAGCTGTGACAAGGG 59.723 52.381 20.04 8.34 0.00 3.95
2657 2844 2.092429 TGACAAGGGTGATTCCATAGGC 60.092 50.000 0.00 0.00 38.11 3.93
2659 2846 0.179018 AAGGGTGATTCCATAGGCGC 60.179 55.000 0.00 0.00 38.11 6.53
2683 2882 7.310664 GCTGATATCAAATGATGTACCAATGG 58.689 38.462 6.90 0.00 36.05 3.16
2684 2883 7.576287 GCTGATATCAAATGATGTACCAATGGG 60.576 40.741 6.90 0.00 36.73 4.00
2719 2933 4.332543 TGAGCACATTAACCATGTCGATTC 59.667 41.667 0.00 0.00 43.17 2.52
2744 2958 6.585322 CCTGAAAAGTTTCATTCATTCAGAGC 59.415 38.462 13.29 0.00 45.26 4.09
2860 3082 1.550976 AGGTGAGGTGATTTCCGAGAC 59.449 52.381 0.00 0.00 0.00 3.36
2867 3089 5.655090 TGAGGTGATTTCCGAGACTTATACA 59.345 40.000 0.00 0.00 0.00 2.29
2966 3188 3.656045 GTTGCAACCGGTGGGACG 61.656 66.667 19.15 0.00 36.97 4.79
2978 3200 2.359230 GGGACGCTTTCTGCAGCT 60.359 61.111 9.47 0.00 43.06 4.24
3009 3231 2.371259 GGTGAGCCCCTCCCTCTTC 61.371 68.421 0.00 0.00 0.00 2.87
3015 3237 0.326143 GCCCCTCCCTCTTCTTCTCT 60.326 60.000 0.00 0.00 0.00 3.10
3016 3238 1.903955 GCCCCTCCCTCTTCTTCTCTT 60.904 57.143 0.00 0.00 0.00 2.85
3017 3239 2.115427 CCCCTCCCTCTTCTTCTCTTC 58.885 57.143 0.00 0.00 0.00 2.87
3018 3240 2.292851 CCCCTCCCTCTTCTTCTCTTCT 60.293 54.545 0.00 0.00 0.00 2.85
3019 3241 3.031013 CCCTCCCTCTTCTTCTCTTCTC 58.969 54.545 0.00 0.00 0.00 2.87
3092 3314 6.862711 TGTGCTACACTAGTACTATAGCAG 57.137 41.667 26.20 13.95 46.54 4.24
3133 3355 5.494706 TGGAAGGGGGATAAGTAAGTCAAAT 59.505 40.000 0.00 0.00 0.00 2.32
3149 3371 4.155462 AGTCAAATGATGTGTGATGCTGAC 59.845 41.667 0.00 0.00 0.00 3.51
3151 3373 4.083164 TCAAATGATGTGTGATGCTGACAC 60.083 41.667 0.00 0.00 43.42 3.67
3227 3449 3.341823 AGCCACTTAAGCATCTCAACAG 58.658 45.455 1.29 0.00 0.00 3.16
3253 3475 7.545965 GCTTAGTGATAAGTGACAACATGTAGT 59.454 37.037 0.00 0.00 0.00 2.73
3277 3499 7.839705 AGTAGAGTAGAGGACCATCATGTTTTA 59.160 37.037 0.00 0.00 0.00 1.52
3297 3519 8.655092 TGTTTTATTGACAAGAAGCAAAGTTTG 58.345 29.630 11.41 11.41 0.00 2.93
3444 3667 7.981102 ACCAAGAGGAAACTTTGTAGATAAC 57.019 36.000 0.00 0.00 44.43 1.89
3453 3676 8.328864 GGAAACTTTGTAGATAACTATGAAGCG 58.671 37.037 0.00 0.00 32.13 4.68
3654 3877 3.373130 CCTAAGTTTAAGGTACGCAAGGC 59.627 47.826 0.00 0.00 46.39 4.35
3795 4138 4.207891 ACTTACCTGTGACCAGCTTATG 57.792 45.455 0.00 0.00 37.38 1.90
3842 4185 3.295973 TGCAGGGCTTCCATATTTTACC 58.704 45.455 0.00 0.00 0.00 2.85
3849 4192 6.102615 AGGGCTTCCATATTTTACCTACATGA 59.897 38.462 0.00 0.00 0.00 3.07
3851 4194 7.451566 GGGCTTCCATATTTTACCTACATGAAT 59.548 37.037 0.00 0.00 0.00 2.57
3986 4329 4.770795 AGAAACACTACATGCATACTCCC 58.229 43.478 0.00 0.00 0.00 4.30
4211 4554 8.938801 TTTACCATGGCATCAAGAATATACAT 57.061 30.769 13.04 0.00 0.00 2.29
4212 4555 8.938801 TTACCATGGCATCAAGAATATACATT 57.061 30.769 13.04 0.00 0.00 2.71
4297 4711 4.436332 CCAGCTGCCCTTTCAAATTTATC 58.564 43.478 8.66 0.00 0.00 1.75
4300 4714 6.110707 CAGCTGCCCTTTCAAATTTATCAAT 58.889 36.000 0.00 0.00 0.00 2.57
4376 4790 2.758423 GGTGGAGTCCCGCAAATAAAAT 59.242 45.455 6.74 0.00 44.70 1.82
4432 4853 8.491152 GTTCATAGTCTCATGGTTGAAATATCG 58.509 37.037 0.00 0.00 0.00 2.92
4442 4863 3.808174 GGTTGAAATATCGCCCAGTAGTC 59.192 47.826 0.00 0.00 0.00 2.59
4452 5228 4.501071 TCGCCCAGTAGTCTTTGTTAATC 58.499 43.478 0.00 0.00 0.00 1.75
4576 5365 9.570468 AATGATATGATCCAATATCCATGCTAC 57.430 33.333 9.45 0.00 38.33 3.58
4678 5467 8.732746 ATAAATAGATGCTTGGTTACTTCGTT 57.267 30.769 0.00 0.00 0.00 3.85
4705 5494 7.856415 AGAAGTTCCACATTAAGCTATTCTCT 58.144 34.615 0.00 0.00 0.00 3.10
4743 5532 6.662755 AGCTAATCTCCACAATCCACATTAA 58.337 36.000 0.00 0.00 0.00 1.40
4880 5671 5.468540 TGATAACTCTGCAGTACACTGTT 57.531 39.130 14.67 11.99 45.45 3.16
4905 5696 2.012673 GCAGCTGCTATTGCTAAGTGT 58.987 47.619 31.33 0.00 38.92 3.55
4906 5697 2.031437 GCAGCTGCTATTGCTAAGTGTC 59.969 50.000 31.33 0.00 38.92 3.67
4907 5698 3.529533 CAGCTGCTATTGCTAAGTGTCT 58.470 45.455 0.00 0.00 38.92 3.41
4908 5699 3.937706 CAGCTGCTATTGCTAAGTGTCTT 59.062 43.478 0.00 0.00 38.92 3.01
5064 5855 4.974103 CTGTTGTTCAGGTTCTTCTACG 57.026 45.455 0.00 0.00 40.23 3.51
5153 5970 8.414778 AGATTACAGTGCTAGTTACAACTATCC 58.585 37.037 2.43 0.00 40.46 2.59
5154 5971 7.713734 TTACAGTGCTAGTTACAACTATCCT 57.286 36.000 2.43 0.00 40.46 3.24
5155 5972 6.607004 ACAGTGCTAGTTACAACTATCCTT 57.393 37.500 2.43 0.00 40.46 3.36
5210 6033 7.362401 GGAGTTACATCGGTAGTTTCTGAACTA 60.362 40.741 0.00 0.00 44.13 2.24
5212 6035 8.027771 AGTTACATCGGTAGTTTCTGAACTAAG 58.972 37.037 0.96 0.28 46.80 2.18
5213 6036 5.169295 ACATCGGTAGTTTCTGAACTAAGC 58.831 41.667 0.96 0.00 46.80 3.09
5214 6037 5.047235 ACATCGGTAGTTTCTGAACTAAGCT 60.047 40.000 0.96 0.00 46.80 3.74
5215 6038 6.152323 ACATCGGTAGTTTCTGAACTAAGCTA 59.848 38.462 0.96 0.00 46.80 3.32
5216 6039 6.770746 TCGGTAGTTTCTGAACTAAGCTAT 57.229 37.500 0.96 0.00 46.80 2.97
5217 6040 6.561614 TCGGTAGTTTCTGAACTAAGCTATG 58.438 40.000 0.96 0.00 46.80 2.23
5333 6158 4.933064 GCTGGGACGCCGATCTCG 62.933 72.222 0.00 3.19 39.44 4.04
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.532557 TGATGTCTCCTAACATGCGATTAG 58.467 41.667 0.00 0.00 39.93 1.73
24 25 5.529581 TGATGTCTCCTAACATGCGATTA 57.470 39.130 0.00 0.00 39.93 1.75
25 26 4.406648 TGATGTCTCCTAACATGCGATT 57.593 40.909 0.00 0.00 39.93 3.34
26 27 4.613925 ATGATGTCTCCTAACATGCGAT 57.386 40.909 0.00 0.00 39.93 4.58
27 28 4.122046 CAATGATGTCTCCTAACATGCGA 58.878 43.478 0.00 0.00 39.93 5.10
28 29 3.873361 ACAATGATGTCTCCTAACATGCG 59.127 43.478 0.00 0.00 39.93 4.73
29 30 5.824904 AACAATGATGTCTCCTAACATGC 57.175 39.130 0.00 0.00 39.93 4.06
30 31 6.032094 GCAAACAATGATGTCTCCTAACATG 58.968 40.000 0.00 0.00 39.93 3.21
31 32 5.948162 AGCAAACAATGATGTCTCCTAACAT 59.052 36.000 0.00 0.00 42.49 2.71
32 33 5.316167 AGCAAACAATGATGTCTCCTAACA 58.684 37.500 0.00 0.00 39.40 2.41
33 34 5.886960 AGCAAACAATGATGTCTCCTAAC 57.113 39.130 0.00 0.00 39.40 2.34
34 35 7.994425 TTTAGCAAACAATGATGTCTCCTAA 57.006 32.000 0.00 0.00 39.40 2.69
35 36 7.994425 TTTTAGCAAACAATGATGTCTCCTA 57.006 32.000 0.00 0.00 39.40 2.94
36 37 6.899393 TTTTAGCAAACAATGATGTCTCCT 57.101 33.333 0.00 0.00 39.40 3.69
37 38 7.599998 ACATTTTTAGCAAACAATGATGTCTCC 59.400 33.333 4.50 0.00 39.40 3.71
38 39 8.430063 CACATTTTTAGCAAACAATGATGTCTC 58.570 33.333 4.50 0.00 39.40 3.36
39 40 7.927629 ACACATTTTTAGCAAACAATGATGTCT 59.072 29.630 4.50 0.00 39.40 3.41
40 41 8.075593 ACACATTTTTAGCAAACAATGATGTC 57.924 30.769 4.50 0.00 39.40 3.06
41 42 7.927629 AGACACATTTTTAGCAAACAATGATGT 59.072 29.630 4.50 5.15 43.14 3.06
42 43 8.301730 AGACACATTTTTAGCAAACAATGATG 57.698 30.769 4.50 2.81 0.00 3.07
43 44 9.410556 GTAGACACATTTTTAGCAAACAATGAT 57.589 29.630 4.50 0.00 0.00 2.45
44 45 8.629158 AGTAGACACATTTTTAGCAAACAATGA 58.371 29.630 4.50 0.00 0.00 2.57
45 46 8.801715 AGTAGACACATTTTTAGCAAACAATG 57.198 30.769 0.00 0.00 0.00 2.82
46 47 9.893305 GTAGTAGACACATTTTTAGCAAACAAT 57.107 29.630 0.00 0.00 0.00 2.71
47 48 9.116067 AGTAGTAGACACATTTTTAGCAAACAA 57.884 29.630 0.00 0.00 0.00 2.83
48 49 8.671384 AGTAGTAGACACATTTTTAGCAAACA 57.329 30.769 0.00 0.00 0.00 2.83
49 50 9.946165 AAAGTAGTAGACACATTTTTAGCAAAC 57.054 29.630 0.00 0.00 0.00 2.93
149 150 5.911838 GCAGTTGACAAAACAAAAGCAAAAA 59.088 32.000 0.00 0.00 34.38 1.94
150 151 5.008019 TGCAGTTGACAAAACAAAAGCAAAA 59.992 32.000 0.00 0.00 38.16 2.44
151 152 4.512944 TGCAGTTGACAAAACAAAAGCAAA 59.487 33.333 0.00 0.00 38.16 3.68
152 153 4.060900 TGCAGTTGACAAAACAAAAGCAA 58.939 34.783 0.00 0.00 38.16 3.91
153 154 3.657634 TGCAGTTGACAAAACAAAAGCA 58.342 36.364 0.00 0.00 38.49 3.91
154 155 3.925913 TCTGCAGTTGACAAAACAAAAGC 59.074 39.130 14.67 0.00 34.62 3.51
155 156 6.298853 GTTTCTGCAGTTGACAAAACAAAAG 58.701 36.000 14.67 0.00 0.00 2.27
156 157 5.178438 GGTTTCTGCAGTTGACAAAACAAAA 59.822 36.000 21.17 6.71 0.00 2.44
157 158 4.688413 GGTTTCTGCAGTTGACAAAACAAA 59.312 37.500 21.17 7.13 0.00 2.83
158 159 4.241681 GGTTTCTGCAGTTGACAAAACAA 58.758 39.130 21.17 1.84 0.00 2.83
159 160 3.256879 TGGTTTCTGCAGTTGACAAAACA 59.743 39.130 21.17 16.44 0.00 2.83
160 161 3.612423 GTGGTTTCTGCAGTTGACAAAAC 59.388 43.478 14.67 14.73 0.00 2.43
161 162 3.367910 GGTGGTTTCTGCAGTTGACAAAA 60.368 43.478 14.67 2.57 0.00 2.44
162 163 2.165437 GGTGGTTTCTGCAGTTGACAAA 59.835 45.455 14.67 3.36 0.00 2.83
163 164 1.748493 GGTGGTTTCTGCAGTTGACAA 59.252 47.619 14.67 1.78 0.00 3.18
164 165 1.340502 TGGTGGTTTCTGCAGTTGACA 60.341 47.619 14.67 6.71 0.00 3.58
165 166 1.065551 GTGGTGGTTTCTGCAGTTGAC 59.934 52.381 14.67 10.56 0.00 3.18
166 167 1.064758 AGTGGTGGTTTCTGCAGTTGA 60.065 47.619 14.67 0.00 0.00 3.18
167 168 1.392589 AGTGGTGGTTTCTGCAGTTG 58.607 50.000 14.67 0.00 0.00 3.16
168 169 2.438021 TCTAGTGGTGGTTTCTGCAGTT 59.562 45.455 14.67 0.00 0.00 3.16
169 170 2.047061 TCTAGTGGTGGTTTCTGCAGT 58.953 47.619 14.67 0.00 0.00 4.40
170 171 2.839486 TCTAGTGGTGGTTTCTGCAG 57.161 50.000 7.63 7.63 0.00 4.41
171 172 3.569194 TTTCTAGTGGTGGTTTCTGCA 57.431 42.857 0.00 0.00 0.00 4.41
172 173 4.327680 AGATTTCTAGTGGTGGTTTCTGC 58.672 43.478 0.00 0.00 0.00 4.26
173 174 5.765182 ACAAGATTTCTAGTGGTGGTTTCTG 59.235 40.000 0.00 0.00 0.00 3.02
174 175 5.941788 ACAAGATTTCTAGTGGTGGTTTCT 58.058 37.500 0.00 0.00 0.00 2.52
175 176 5.763204 TGACAAGATTTCTAGTGGTGGTTTC 59.237 40.000 0.00 0.00 0.00 2.78
176 177 5.690865 TGACAAGATTTCTAGTGGTGGTTT 58.309 37.500 0.00 0.00 0.00 3.27
177 178 5.304686 TGACAAGATTTCTAGTGGTGGTT 57.695 39.130 0.00 0.00 0.00 3.67
178 179 4.974645 TGACAAGATTTCTAGTGGTGGT 57.025 40.909 0.00 0.00 0.00 4.16
179 180 5.939883 TGATTGACAAGATTTCTAGTGGTGG 59.060 40.000 0.00 0.00 0.00 4.61
180 181 6.128172 GGTGATTGACAAGATTTCTAGTGGTG 60.128 42.308 0.00 0.00 0.00 4.17
181 182 5.940470 GGTGATTGACAAGATTTCTAGTGGT 59.060 40.000 0.00 0.00 0.00 4.16
182 183 5.939883 TGGTGATTGACAAGATTTCTAGTGG 59.060 40.000 0.00 0.00 0.00 4.00
183 184 7.621428 ATGGTGATTGACAAGATTTCTAGTG 57.379 36.000 0.00 0.00 0.00 2.74
184 185 8.517878 CAAATGGTGATTGACAAGATTTCTAGT 58.482 33.333 0.00 0.00 0.00 2.57
185 186 7.972277 CCAAATGGTGATTGACAAGATTTCTAG 59.028 37.037 0.00 0.00 0.00 2.43
186 187 7.577426 GCCAAATGGTGATTGACAAGATTTCTA 60.577 37.037 0.71 0.00 37.57 2.10
187 188 6.694447 CCAAATGGTGATTGACAAGATTTCT 58.306 36.000 0.00 0.00 0.00 2.52
188 189 5.349543 GCCAAATGGTGATTGACAAGATTTC 59.650 40.000 0.71 0.00 37.57 2.17
189 190 5.221682 TGCCAAATGGTGATTGACAAGATTT 60.222 36.000 0.71 0.00 37.57 2.17
190 191 4.283978 TGCCAAATGGTGATTGACAAGATT 59.716 37.500 0.71 0.00 37.57 2.40
191 192 3.833650 TGCCAAATGGTGATTGACAAGAT 59.166 39.130 0.71 0.00 37.57 2.40
192 193 3.229293 TGCCAAATGGTGATTGACAAGA 58.771 40.909 0.71 0.00 37.57 3.02
193 194 3.663995 TGCCAAATGGTGATTGACAAG 57.336 42.857 0.71 0.00 37.57 3.16
194 195 3.577415 TCATGCCAAATGGTGATTGACAA 59.423 39.130 0.71 0.00 37.57 3.18
195 196 3.056678 GTCATGCCAAATGGTGATTGACA 60.057 43.478 15.12 0.78 37.57 3.58
196 197 3.194116 AGTCATGCCAAATGGTGATTGAC 59.806 43.478 13.47 13.47 37.57 3.18
197 198 3.193903 CAGTCATGCCAAATGGTGATTGA 59.806 43.478 8.85 2.26 32.98 2.57
198 199 3.517602 CAGTCATGCCAAATGGTGATTG 58.482 45.455 0.71 1.84 37.57 2.67
199 200 2.498481 CCAGTCATGCCAAATGGTGATT 59.502 45.455 0.71 0.00 37.57 2.57
200 201 2.104967 CCAGTCATGCCAAATGGTGAT 58.895 47.619 0.71 0.00 37.57 3.06
201 202 1.548081 CCAGTCATGCCAAATGGTGA 58.452 50.000 0.71 0.00 37.57 4.02
202 203 0.108520 GCCAGTCATGCCAAATGGTG 60.109 55.000 0.71 0.00 37.57 4.17
203 204 1.597797 CGCCAGTCATGCCAAATGGT 61.598 55.000 0.71 0.00 37.57 3.55
204 205 1.140161 CGCCAGTCATGCCAAATGG 59.860 57.895 0.00 0.00 38.53 3.16
205 206 1.140161 CCGCCAGTCATGCCAAATG 59.860 57.895 0.00 0.00 0.00 2.32
206 207 2.053865 CCCGCCAGTCATGCCAAAT 61.054 57.895 0.00 0.00 0.00 2.32
207 208 2.676121 CCCGCCAGTCATGCCAAA 60.676 61.111 0.00 0.00 0.00 3.28
210 211 4.175337 TAGCCCGCCAGTCATGCC 62.175 66.667 0.00 0.00 0.00 4.40
211 212 2.897350 GTAGCCCGCCAGTCATGC 60.897 66.667 0.00 0.00 0.00 4.06
212 213 0.882042 GATGTAGCCCGCCAGTCATG 60.882 60.000 0.00 0.00 0.00 3.07
213 214 1.337384 TGATGTAGCCCGCCAGTCAT 61.337 55.000 0.00 0.00 0.00 3.06
214 215 1.987306 TGATGTAGCCCGCCAGTCA 60.987 57.895 0.00 0.00 0.00 3.41
215 216 1.521681 GTGATGTAGCCCGCCAGTC 60.522 63.158 0.00 0.00 0.00 3.51
216 217 1.836999 TTGTGATGTAGCCCGCCAGT 61.837 55.000 0.00 0.00 0.00 4.00
217 218 0.676466 TTTGTGATGTAGCCCGCCAG 60.676 55.000 0.00 0.00 0.00 4.85
218 219 0.958382 GTTTGTGATGTAGCCCGCCA 60.958 55.000 0.00 0.00 0.00 5.69
219 220 1.800681 GTTTGTGATGTAGCCCGCC 59.199 57.895 0.00 0.00 0.00 6.13
220 221 1.423845 CGTTTGTGATGTAGCCCGC 59.576 57.895 0.00 0.00 0.00 6.13
221 222 0.672401 ACCGTTTGTGATGTAGCCCG 60.672 55.000 0.00 0.00 0.00 6.13
222 223 3.243128 ACCGTTTGTGATGTAGCCC 57.757 52.632 0.00 0.00 0.00 5.19
231 232 2.276201 TGAGTTGTCTCACCGTTTGTG 58.724 47.619 0.00 0.00 44.58 3.33
232 233 2.684001 TGAGTTGTCTCACCGTTTGT 57.316 45.000 0.00 0.00 44.58 2.83
241 242 5.617751 CGGGATTTCATTGTTGAGTTGTCTC 60.618 44.000 0.00 0.00 40.79 3.36
242 243 4.216257 CGGGATTTCATTGTTGAGTTGTCT 59.784 41.667 0.00 0.00 32.27 3.41
243 244 4.023193 ACGGGATTTCATTGTTGAGTTGTC 60.023 41.667 0.00 0.00 32.27 3.18
244 245 3.888930 ACGGGATTTCATTGTTGAGTTGT 59.111 39.130 0.00 0.00 32.27 3.32
245 246 4.023279 TGACGGGATTTCATTGTTGAGTTG 60.023 41.667 0.00 0.00 32.27 3.16
246 247 4.141287 TGACGGGATTTCATTGTTGAGTT 58.859 39.130 0.00 0.00 32.27 3.01
247 248 3.750371 TGACGGGATTTCATTGTTGAGT 58.250 40.909 0.00 0.00 32.27 3.41
248 249 4.764679 TTGACGGGATTTCATTGTTGAG 57.235 40.909 0.00 0.00 32.27 3.02
249 250 4.142708 CGATTGACGGGATTTCATTGTTGA 60.143 41.667 0.00 0.00 38.46 3.18
250 251 4.097714 CGATTGACGGGATTTCATTGTTG 58.902 43.478 0.00 0.00 38.46 3.33
251 252 3.427503 GCGATTGACGGGATTTCATTGTT 60.428 43.478 0.00 0.00 42.83 2.83
252 253 2.097466 GCGATTGACGGGATTTCATTGT 59.903 45.455 0.00 0.00 42.83 2.71
253 254 2.355756 AGCGATTGACGGGATTTCATTG 59.644 45.455 0.00 0.00 42.83 2.82
254 255 2.355756 CAGCGATTGACGGGATTTCATT 59.644 45.455 0.00 0.00 42.83 2.57
255 256 1.942657 CAGCGATTGACGGGATTTCAT 59.057 47.619 0.00 0.00 42.83 2.57
256 257 1.338674 ACAGCGATTGACGGGATTTCA 60.339 47.619 0.00 0.00 42.83 2.69
257 258 1.369625 ACAGCGATTGACGGGATTTC 58.630 50.000 0.00 0.00 42.83 2.17
258 259 1.737793 GAACAGCGATTGACGGGATTT 59.262 47.619 0.00 0.00 42.83 2.17
259 260 1.338674 TGAACAGCGATTGACGGGATT 60.339 47.619 0.00 0.00 42.83 3.01
260 261 0.249120 TGAACAGCGATTGACGGGAT 59.751 50.000 0.00 0.00 42.83 3.85
261 262 0.389817 CTGAACAGCGATTGACGGGA 60.390 55.000 0.00 0.00 42.83 5.14
262 263 1.970917 GCTGAACAGCGATTGACGGG 61.971 60.000 10.99 0.00 45.29 5.28
263 264 1.421485 GCTGAACAGCGATTGACGG 59.579 57.895 10.99 0.00 45.29 4.79
273 274 4.572985 TCTTTCATTGTTGGCTGAACAG 57.427 40.909 0.00 0.00 45.43 3.16
274 275 4.998671 TTCTTTCATTGTTGGCTGAACA 57.001 36.364 0.00 0.00 43.11 3.18
275 276 6.042143 TCTTTTCTTTCATTGTTGGCTGAAC 58.958 36.000 0.00 0.00 31.41 3.18
276 277 6.219417 TCTTTTCTTTCATTGTTGGCTGAA 57.781 33.333 0.00 0.00 0.00 3.02
277 278 5.850557 TCTTTTCTTTCATTGTTGGCTGA 57.149 34.783 0.00 0.00 0.00 4.26
278 279 5.407387 CCATCTTTTCTTTCATTGTTGGCTG 59.593 40.000 0.00 0.00 0.00 4.85
279 280 5.305128 TCCATCTTTTCTTTCATTGTTGGCT 59.695 36.000 0.00 0.00 0.00 4.75
280 281 5.540911 TCCATCTTTTCTTTCATTGTTGGC 58.459 37.500 0.00 0.00 0.00 4.52
281 282 6.592607 CCATCCATCTTTTCTTTCATTGTTGG 59.407 38.462 0.00 0.00 0.00 3.77
282 283 7.117236 CACCATCCATCTTTTCTTTCATTGTTG 59.883 37.037 0.00 0.00 0.00 3.33
283 284 7.156673 CACCATCCATCTTTTCTTTCATTGTT 58.843 34.615 0.00 0.00 0.00 2.83
284 285 6.295462 CCACCATCCATCTTTTCTTTCATTGT 60.295 38.462 0.00 0.00 0.00 2.71
285 286 6.103997 CCACCATCCATCTTTTCTTTCATTG 58.896 40.000 0.00 0.00 0.00 2.82
286 287 5.188359 CCCACCATCCATCTTTTCTTTCATT 59.812 40.000 0.00 0.00 0.00 2.57
287 288 4.713321 CCCACCATCCATCTTTTCTTTCAT 59.287 41.667 0.00 0.00 0.00 2.57
288 289 4.088634 CCCACCATCCATCTTTTCTTTCA 58.911 43.478 0.00 0.00 0.00 2.69
289 290 4.089361 ACCCACCATCCATCTTTTCTTTC 58.911 43.478 0.00 0.00 0.00 2.62
290 291 4.132122 ACCCACCATCCATCTTTTCTTT 57.868 40.909 0.00 0.00 0.00 2.52
291 292 3.833559 ACCCACCATCCATCTTTTCTT 57.166 42.857 0.00 0.00 0.00 2.52
292 293 3.833559 AACCCACCATCCATCTTTTCT 57.166 42.857 0.00 0.00 0.00 2.52
293 294 4.890158 AAAACCCACCATCCATCTTTTC 57.110 40.909 0.00 0.00 0.00 2.29
294 295 4.746395 GCAAAAACCCACCATCCATCTTTT 60.746 41.667 0.00 0.00 0.00 2.27
295 296 3.244526 GCAAAAACCCACCATCCATCTTT 60.245 43.478 0.00 0.00 0.00 2.52
296 297 2.302733 GCAAAAACCCACCATCCATCTT 59.697 45.455 0.00 0.00 0.00 2.40
297 298 1.901833 GCAAAAACCCACCATCCATCT 59.098 47.619 0.00 0.00 0.00 2.90
298 299 1.404047 CGCAAAAACCCACCATCCATC 60.404 52.381 0.00 0.00 0.00 3.51
299 300 0.607620 CGCAAAAACCCACCATCCAT 59.392 50.000 0.00 0.00 0.00 3.41
300 301 0.468214 TCGCAAAAACCCACCATCCA 60.468 50.000 0.00 0.00 0.00 3.41
301 302 0.894835 ATCGCAAAAACCCACCATCC 59.105 50.000 0.00 0.00 0.00 3.51
302 303 2.741759 AATCGCAAAAACCCACCATC 57.258 45.000 0.00 0.00 0.00 3.51
303 304 3.576550 AGTAAATCGCAAAAACCCACCAT 59.423 39.130 0.00 0.00 0.00 3.55
304 305 2.959707 AGTAAATCGCAAAAACCCACCA 59.040 40.909 0.00 0.00 0.00 4.17
305 306 3.571571 GAGTAAATCGCAAAAACCCACC 58.428 45.455 0.00 0.00 0.00 4.61
306 307 3.571571 GGAGTAAATCGCAAAAACCCAC 58.428 45.455 0.00 0.00 0.00 4.61
307 308 2.226912 CGGAGTAAATCGCAAAAACCCA 59.773 45.455 0.00 0.00 0.00 4.51
308 309 2.485038 TCGGAGTAAATCGCAAAAACCC 59.515 45.455 0.00 0.00 0.00 4.11
309 310 3.817148 TCGGAGTAAATCGCAAAAACC 57.183 42.857 0.00 0.00 0.00 3.27
310 311 3.542310 GCATCGGAGTAAATCGCAAAAAC 59.458 43.478 0.00 0.00 0.00 2.43
311 312 3.726486 CGCATCGGAGTAAATCGCAAAAA 60.726 43.478 0.00 0.00 0.00 1.94
312 313 2.222931 CGCATCGGAGTAAATCGCAAAA 60.223 45.455 0.00 0.00 0.00 2.44
313 314 1.326245 CGCATCGGAGTAAATCGCAAA 59.674 47.619 0.00 0.00 0.00 3.68
314 315 0.927537 CGCATCGGAGTAAATCGCAA 59.072 50.000 0.00 0.00 0.00 4.85
315 316 1.487452 GCGCATCGGAGTAAATCGCA 61.487 55.000 0.30 0.00 40.63 5.10
316 317 1.201825 GCGCATCGGAGTAAATCGC 59.798 57.895 0.30 0.00 0.00 4.58
317 318 0.927537 TTGCGCATCGGAGTAAATCG 59.072 50.000 12.75 0.00 0.00 3.34
318 319 1.663643 TGTTGCGCATCGGAGTAAATC 59.336 47.619 12.75 0.00 0.00 2.17
319 320 1.732941 TGTTGCGCATCGGAGTAAAT 58.267 45.000 12.75 0.00 0.00 1.40
320 321 1.463056 CTTGTTGCGCATCGGAGTAAA 59.537 47.619 12.75 0.00 0.00 2.01
321 322 1.075542 CTTGTTGCGCATCGGAGTAA 58.924 50.000 12.75 0.00 0.00 2.24
322 323 1.358725 GCTTGTTGCGCATCGGAGTA 61.359 55.000 12.75 0.00 0.00 2.59
323 324 2.680913 GCTTGTTGCGCATCGGAGT 61.681 57.895 12.75 0.00 0.00 3.85
324 325 2.099062 GCTTGTTGCGCATCGGAG 59.901 61.111 12.75 13.62 0.00 4.63
325 326 1.790090 TTTGCTTGTTGCGCATCGGA 61.790 50.000 12.75 2.31 46.63 4.55
326 327 1.339235 CTTTGCTTGTTGCGCATCGG 61.339 55.000 12.75 8.87 46.63 4.18
327 328 1.339235 CCTTTGCTTGTTGCGCATCG 61.339 55.000 12.75 0.00 46.63 3.84
328 329 0.039256 TCCTTTGCTTGTTGCGCATC 60.039 50.000 12.75 12.06 46.63 3.91
329 330 0.388659 TTCCTTTGCTTGTTGCGCAT 59.611 45.000 12.75 0.00 46.63 4.73
330 331 0.174389 TTTCCTTTGCTTGTTGCGCA 59.826 45.000 5.66 5.66 46.63 6.09
331 332 0.854705 CTTTCCTTTGCTTGTTGCGC 59.145 50.000 0.00 0.00 46.63 6.09
332 333 2.208326 ACTTTCCTTTGCTTGTTGCG 57.792 45.000 0.00 0.00 46.63 4.85
333 334 3.796717 GTGTACTTTCCTTTGCTTGTTGC 59.203 43.478 0.00 0.00 43.25 4.17
334 335 4.035017 CGTGTACTTTCCTTTGCTTGTTG 58.965 43.478 0.00 0.00 0.00 3.33
335 336 3.692593 ACGTGTACTTTCCTTTGCTTGTT 59.307 39.130 0.00 0.00 0.00 2.83
336 337 3.064820 CACGTGTACTTTCCTTTGCTTGT 59.935 43.478 7.58 0.00 0.00 3.16
337 338 3.617669 CACGTGTACTTTCCTTTGCTTG 58.382 45.455 7.58 0.00 0.00 4.01
338 339 2.032924 GCACGTGTACTTTCCTTTGCTT 59.967 45.455 18.38 0.00 0.00 3.91
339 340 1.602377 GCACGTGTACTTTCCTTTGCT 59.398 47.619 18.38 0.00 0.00 3.91
340 341 1.334689 GGCACGTGTACTTTCCTTTGC 60.335 52.381 18.38 0.00 0.00 3.68
341 342 2.681152 GGCACGTGTACTTTCCTTTG 57.319 50.000 18.38 0.00 0.00 2.77
356 357 7.856894 TCAGTTTTTATAGTTTTTACACGGCAC 59.143 33.333 0.00 0.00 0.00 5.01
357 358 7.928103 TCAGTTTTTATAGTTTTTACACGGCA 58.072 30.769 0.00 0.00 0.00 5.69
358 359 8.959734 ATCAGTTTTTATAGTTTTTACACGGC 57.040 30.769 0.00 0.00 0.00 5.68
365 366 9.503399 ACGGAGAGATCAGTTTTTATAGTTTTT 57.497 29.630 0.00 0.00 0.00 1.94
366 367 9.152595 GACGGAGAGATCAGTTTTTATAGTTTT 57.847 33.333 0.00 0.00 0.00 2.43
367 368 8.532819 AGACGGAGAGATCAGTTTTTATAGTTT 58.467 33.333 0.00 0.00 0.00 2.66
368 369 8.068892 AGACGGAGAGATCAGTTTTTATAGTT 57.931 34.615 0.00 0.00 0.00 2.24
369 370 7.339721 TGAGACGGAGAGATCAGTTTTTATAGT 59.660 37.037 0.00 0.00 0.00 2.12
370 371 7.708051 TGAGACGGAGAGATCAGTTTTTATAG 58.292 38.462 0.00 0.00 0.00 1.31
371 372 7.640597 TGAGACGGAGAGATCAGTTTTTATA 57.359 36.000 0.00 0.00 0.00 0.98
372 373 6.531503 TGAGACGGAGAGATCAGTTTTTAT 57.468 37.500 0.00 0.00 0.00 1.40
373 374 5.977489 TGAGACGGAGAGATCAGTTTTTA 57.023 39.130 0.00 0.00 0.00 1.52
374 375 4.873746 TGAGACGGAGAGATCAGTTTTT 57.126 40.909 0.00 0.00 0.00 1.94
375 376 4.873746 TTGAGACGGAGAGATCAGTTTT 57.126 40.909 0.00 0.00 0.00 2.43
376 377 4.873746 TTTGAGACGGAGAGATCAGTTT 57.126 40.909 0.00 0.00 0.00 2.66
377 378 4.873746 TTTTGAGACGGAGAGATCAGTT 57.126 40.909 0.00 0.00 0.00 3.16
378 379 6.153680 ACTTATTTTGAGACGGAGAGATCAGT 59.846 38.462 0.00 0.00 0.00 3.41
379 380 6.475076 CACTTATTTTGAGACGGAGAGATCAG 59.525 42.308 0.00 0.00 0.00 2.90
380 381 6.071334 ACACTTATTTTGAGACGGAGAGATCA 60.071 38.462 0.00 0.00 0.00 2.92
381 382 6.334202 ACACTTATTTTGAGACGGAGAGATC 58.666 40.000 0.00 0.00 0.00 2.75
382 383 6.287589 ACACTTATTTTGAGACGGAGAGAT 57.712 37.500 0.00 0.00 0.00 2.75
383 384 5.619309 CGACACTTATTTTGAGACGGAGAGA 60.619 44.000 0.00 0.00 0.00 3.10
384 385 4.559251 CGACACTTATTTTGAGACGGAGAG 59.441 45.833 0.00 0.00 0.00 3.20
385 386 4.022589 ACGACACTTATTTTGAGACGGAGA 60.023 41.667 0.00 0.00 0.00 3.71
386 387 4.235360 ACGACACTTATTTTGAGACGGAG 58.765 43.478 0.00 0.00 0.00 4.63
387 388 4.247267 ACGACACTTATTTTGAGACGGA 57.753 40.909 0.00 0.00 0.00 4.69
388 389 4.446385 TCAACGACACTTATTTTGAGACGG 59.554 41.667 0.00 0.00 0.00 4.79
389 390 5.570262 TCAACGACACTTATTTTGAGACG 57.430 39.130 0.00 0.00 0.00 4.18
390 391 9.872757 TTAAATCAACGACACTTATTTTGAGAC 57.127 29.630 0.00 0.00 30.07 3.36
441 442 9.694520 CGTCTCAAAATAAATGTCACTGATTAG 57.305 33.333 0.00 0.00 0.00 1.73
442 443 9.430623 TCGTCTCAAAATAAATGTCACTGATTA 57.569 29.630 0.00 0.00 0.00 1.75
443 444 8.322906 TCGTCTCAAAATAAATGTCACTGATT 57.677 30.769 0.00 0.00 0.00 2.57
444 445 7.905604 TCGTCTCAAAATAAATGTCACTGAT 57.094 32.000 0.00 0.00 0.00 2.90
445 446 7.655732 TCTTCGTCTCAAAATAAATGTCACTGA 59.344 33.333 0.00 0.00 0.00 3.41
446 447 7.796838 TCTTCGTCTCAAAATAAATGTCACTG 58.203 34.615 0.00 0.00 0.00 3.66
447 448 7.962964 TCTTCGTCTCAAAATAAATGTCACT 57.037 32.000 0.00 0.00 0.00 3.41
448 449 9.445786 TTTTCTTCGTCTCAAAATAAATGTCAC 57.554 29.630 0.00 0.00 0.00 3.67
455 456 9.801714 GTTCGTATTTTCTTCGTCTCAAAATAA 57.198 29.630 0.00 0.00 35.03 1.40
456 457 8.437742 GGTTCGTATTTTCTTCGTCTCAAAATA 58.562 33.333 0.00 0.00 33.02 1.40
457 458 7.041644 TGGTTCGTATTTTCTTCGTCTCAAAAT 60.042 33.333 0.00 0.00 34.75 1.82
458 459 6.258287 TGGTTCGTATTTTCTTCGTCTCAAAA 59.742 34.615 0.00 0.00 0.00 2.44
459 460 5.754406 TGGTTCGTATTTTCTTCGTCTCAAA 59.246 36.000 0.00 0.00 0.00 2.69
460 461 5.291178 TGGTTCGTATTTTCTTCGTCTCAA 58.709 37.500 0.00 0.00 0.00 3.02
461 462 4.873817 TGGTTCGTATTTTCTTCGTCTCA 58.126 39.130 0.00 0.00 0.00 3.27
462 463 5.060693 GTCTGGTTCGTATTTTCTTCGTCTC 59.939 44.000 0.00 0.00 0.00 3.36
463 464 4.922103 GTCTGGTTCGTATTTTCTTCGTCT 59.078 41.667 0.00 0.00 0.00 4.18
464 465 4.201466 CGTCTGGTTCGTATTTTCTTCGTC 60.201 45.833 0.00 0.00 0.00 4.20
465 466 3.671928 CGTCTGGTTCGTATTTTCTTCGT 59.328 43.478 0.00 0.00 0.00 3.85
466 467 3.481467 GCGTCTGGTTCGTATTTTCTTCG 60.481 47.826 0.00 0.00 0.00 3.79
467 468 3.430895 TGCGTCTGGTTCGTATTTTCTTC 59.569 43.478 0.00 0.00 0.00 2.87
468 469 3.395639 TGCGTCTGGTTCGTATTTTCTT 58.604 40.909 0.00 0.00 0.00 2.52
469 470 2.993899 CTGCGTCTGGTTCGTATTTTCT 59.006 45.455 0.00 0.00 0.00 2.52
470 471 2.735134 ACTGCGTCTGGTTCGTATTTTC 59.265 45.455 0.00 0.00 0.00 2.29
471 472 2.762745 ACTGCGTCTGGTTCGTATTTT 58.237 42.857 0.00 0.00 0.00 1.82
472 473 2.450609 ACTGCGTCTGGTTCGTATTT 57.549 45.000 0.00 0.00 0.00 1.40
473 474 3.581024 TTACTGCGTCTGGTTCGTATT 57.419 42.857 0.00 0.00 0.00 1.89
474 475 3.795623 ATTACTGCGTCTGGTTCGTAT 57.204 42.857 0.00 0.00 0.00 3.06
475 476 4.700268 TTATTACTGCGTCTGGTTCGTA 57.300 40.909 0.00 0.00 0.00 3.43
476 477 3.581024 TTATTACTGCGTCTGGTTCGT 57.419 42.857 0.00 0.00 0.00 3.85
477 478 4.171005 TCTTTATTACTGCGTCTGGTTCG 58.829 43.478 0.00 0.00 0.00 3.95
478 479 5.169295 ACTCTTTATTACTGCGTCTGGTTC 58.831 41.667 0.00 0.00 0.00 3.62
479 480 5.148651 ACTCTTTATTACTGCGTCTGGTT 57.851 39.130 0.00 0.00 0.00 3.67
480 481 4.803098 ACTCTTTATTACTGCGTCTGGT 57.197 40.909 0.00 0.00 0.00 4.00
481 482 7.591006 TTTAACTCTTTATTACTGCGTCTGG 57.409 36.000 0.00 0.00 0.00 3.86
482 483 8.492748 TGTTTTAACTCTTTATTACTGCGTCTG 58.507 33.333 0.00 0.00 0.00 3.51
483 484 8.493547 GTGTTTTAACTCTTTATTACTGCGTCT 58.506 33.333 0.00 0.00 0.00 4.18
484 485 7.473411 CGTGTTTTAACTCTTTATTACTGCGTC 59.527 37.037 0.00 0.00 0.00 5.19
485 486 7.042523 ACGTGTTTTAACTCTTTATTACTGCGT 60.043 33.333 0.00 0.00 0.00 5.24
486 487 7.285788 ACGTGTTTTAACTCTTTATTACTGCG 58.714 34.615 0.00 0.00 0.00 5.18
487 488 8.493547 AGACGTGTTTTAACTCTTTATTACTGC 58.506 33.333 0.00 0.00 0.00 4.40
489 490 9.201127 GGAGACGTGTTTTAACTCTTTATTACT 57.799 33.333 0.00 0.00 0.00 2.24
490 491 8.981647 TGGAGACGTGTTTTAACTCTTTATTAC 58.018 33.333 0.00 0.00 0.00 1.89
491 492 9.715121 ATGGAGACGTGTTTTAACTCTTTATTA 57.285 29.630 0.00 0.00 0.00 0.98
492 493 8.617290 ATGGAGACGTGTTTTAACTCTTTATT 57.383 30.769 0.00 0.00 0.00 1.40
493 494 7.876068 TGATGGAGACGTGTTTTAACTCTTTAT 59.124 33.333 0.00 0.00 0.00 1.40
494 495 7.211573 TGATGGAGACGTGTTTTAACTCTTTA 58.788 34.615 0.00 0.00 0.00 1.85
495 496 6.053005 TGATGGAGACGTGTTTTAACTCTTT 58.947 36.000 0.00 0.00 0.00 2.52
496 497 5.607477 TGATGGAGACGTGTTTTAACTCTT 58.393 37.500 0.00 0.00 0.00 2.85
497 498 5.209818 TGATGGAGACGTGTTTTAACTCT 57.790 39.130 0.00 0.00 0.00 3.24
498 499 4.143094 GCTGATGGAGACGTGTTTTAACTC 60.143 45.833 0.00 0.00 0.00 3.01
499 500 3.746492 GCTGATGGAGACGTGTTTTAACT 59.254 43.478 0.00 0.00 0.00 2.24
500 501 3.496884 TGCTGATGGAGACGTGTTTTAAC 59.503 43.478 0.00 0.00 0.00 2.01
501 502 3.734463 TGCTGATGGAGACGTGTTTTAA 58.266 40.909 0.00 0.00 0.00 1.52
502 503 3.244078 ACTGCTGATGGAGACGTGTTTTA 60.244 43.478 0.00 0.00 35.49 1.52
503 504 2.146342 CTGCTGATGGAGACGTGTTTT 58.854 47.619 0.00 0.00 33.10 2.43
504 505 1.070758 ACTGCTGATGGAGACGTGTTT 59.929 47.619 0.00 0.00 35.49 2.83
505 506 0.681733 ACTGCTGATGGAGACGTGTT 59.318 50.000 0.00 0.00 35.49 3.32
506 507 0.681733 AACTGCTGATGGAGACGTGT 59.318 50.000 0.00 0.00 35.49 4.49
507 508 2.094494 AGTAACTGCTGATGGAGACGTG 60.094 50.000 0.00 0.00 35.49 4.49
508 509 2.171840 AGTAACTGCTGATGGAGACGT 58.828 47.619 0.00 0.00 35.49 4.34
509 510 2.949451 AGTAACTGCTGATGGAGACG 57.051 50.000 0.00 0.00 35.49 4.18
510 511 3.383185 AGCTAGTAACTGCTGATGGAGAC 59.617 47.826 0.00 0.00 38.21 3.36
511 512 3.636679 AGCTAGTAACTGCTGATGGAGA 58.363 45.455 0.00 0.00 38.21 3.71
532 533 3.356639 CTCGCTTCTGGCTACGGCA 62.357 63.158 0.00 0.00 40.87 5.69
533 534 2.356818 ATCTCGCTTCTGGCTACGGC 62.357 60.000 0.00 0.00 39.13 5.68
534 535 0.318275 GATCTCGCTTCTGGCTACGG 60.318 60.000 0.00 0.00 39.13 4.02
535 536 0.665835 AGATCTCGCTTCTGGCTACG 59.334 55.000 0.00 0.00 39.13 3.51
536 537 2.863137 CAAAGATCTCGCTTCTGGCTAC 59.137 50.000 0.00 0.00 39.13 3.58
537 538 2.497675 ACAAAGATCTCGCTTCTGGCTA 59.502 45.455 0.00 0.00 39.13 3.93
538 539 1.277557 ACAAAGATCTCGCTTCTGGCT 59.722 47.619 0.00 0.00 39.13 4.75
539 540 1.731720 ACAAAGATCTCGCTTCTGGC 58.268 50.000 0.00 0.00 37.64 4.85
540 541 3.748048 TGAAACAAAGATCTCGCTTCTGG 59.252 43.478 0.00 0.00 0.00 3.86
541 542 4.687948 TCTGAAACAAAGATCTCGCTTCTG 59.312 41.667 0.00 2.73 0.00 3.02
542 543 4.688413 GTCTGAAACAAAGATCTCGCTTCT 59.312 41.667 0.00 0.00 0.00 2.85
543 544 4.449068 TGTCTGAAACAAAGATCTCGCTTC 59.551 41.667 0.00 0.00 34.03 3.86
544 545 4.212214 GTGTCTGAAACAAAGATCTCGCTT 59.788 41.667 0.00 0.00 40.31 4.68
545 546 3.743396 GTGTCTGAAACAAAGATCTCGCT 59.257 43.478 0.00 0.00 40.31 4.93
546 547 3.494626 TGTGTCTGAAACAAAGATCTCGC 59.505 43.478 0.00 0.00 40.31 5.03
547 548 5.435557 GTTGTGTCTGAAACAAAGATCTCG 58.564 41.667 14.69 0.00 40.31 4.04
548 549 5.529060 AGGTTGTGTCTGAAACAAAGATCTC 59.471 40.000 14.69 2.10 40.31 2.75
549 550 5.440610 AGGTTGTGTCTGAAACAAAGATCT 58.559 37.500 14.69 7.82 40.31 2.75
550 551 5.529060 AGAGGTTGTGTCTGAAACAAAGATC 59.471 40.000 14.69 12.31 40.31 2.75
551 552 5.297776 CAGAGGTTGTGTCTGAAACAAAGAT 59.702 40.000 14.69 4.41 43.65 2.40
552 553 4.635765 CAGAGGTTGTGTCTGAAACAAAGA 59.364 41.667 14.69 0.00 43.65 2.52
553 554 4.731773 GCAGAGGTTGTGTCTGAAACAAAG 60.732 45.833 14.69 4.91 43.65 2.77
554 555 3.128589 GCAGAGGTTGTGTCTGAAACAAA 59.871 43.478 14.69 0.00 43.65 2.83
555 556 2.682856 GCAGAGGTTGTGTCTGAAACAA 59.317 45.455 9.31 9.31 43.65 2.83
556 557 2.288666 GCAGAGGTTGTGTCTGAAACA 58.711 47.619 4.28 0.00 43.65 2.83
557 558 1.604278 GGCAGAGGTTGTGTCTGAAAC 59.396 52.381 4.28 0.00 43.65 2.78
558 559 1.810031 CGGCAGAGGTTGTGTCTGAAA 60.810 52.381 4.28 0.00 43.65 2.69
559 560 0.249868 CGGCAGAGGTTGTGTCTGAA 60.250 55.000 4.28 0.00 43.65 3.02
560 561 1.367471 CGGCAGAGGTTGTGTCTGA 59.633 57.895 4.28 0.00 43.65 3.27
561 562 2.320587 GCGGCAGAGGTTGTGTCTG 61.321 63.158 0.00 0.00 43.77 3.51
562 563 2.031163 GCGGCAGAGGTTGTGTCT 59.969 61.111 0.00 0.00 0.00 3.41
563 564 3.414700 CGCGGCAGAGGTTGTGTC 61.415 66.667 0.00 0.00 0.00 3.67
564 565 4.988598 CCGCGGCAGAGGTTGTGT 62.989 66.667 14.67 0.00 32.25 3.72
575 576 3.281359 AACCAGATTTTGCCGCGGC 62.281 57.895 42.35 42.35 42.35 6.53
576 577 1.444212 CAACCAGATTTTGCCGCGG 60.444 57.895 24.05 24.05 0.00 6.46
577 578 0.039617 TTCAACCAGATTTTGCCGCG 60.040 50.000 0.00 0.00 0.00 6.46
578 579 1.701704 CTTCAACCAGATTTTGCCGC 58.298 50.000 0.00 0.00 0.00 6.53
579 580 1.701704 GCTTCAACCAGATTTTGCCG 58.298 50.000 0.00 0.00 0.00 5.69
580 581 1.269448 TCGCTTCAACCAGATTTTGCC 59.731 47.619 0.00 0.00 0.00 4.52
581 582 2.704725 TCGCTTCAACCAGATTTTGC 57.295 45.000 0.00 0.00 0.00 3.68
582 583 2.982470 GCTTCGCTTCAACCAGATTTTG 59.018 45.455 0.00 0.00 0.00 2.44
583 584 2.350772 CGCTTCGCTTCAACCAGATTTT 60.351 45.455 0.00 0.00 0.00 1.82
584 585 1.197721 CGCTTCGCTTCAACCAGATTT 59.802 47.619 0.00 0.00 0.00 2.17
585 586 0.798776 CGCTTCGCTTCAACCAGATT 59.201 50.000 0.00 0.00 0.00 2.40
586 587 1.021390 CCGCTTCGCTTCAACCAGAT 61.021 55.000 0.00 0.00 0.00 2.90
587 588 1.667830 CCGCTTCGCTTCAACCAGA 60.668 57.895 0.00 0.00 0.00 3.86
588 589 0.669318 TACCGCTTCGCTTCAACCAG 60.669 55.000 0.00 0.00 0.00 4.00
589 590 0.249953 TTACCGCTTCGCTTCAACCA 60.250 50.000 0.00 0.00 0.00 3.67
590 591 0.869730 TTTACCGCTTCGCTTCAACC 59.130 50.000 0.00 0.00 0.00 3.77
591 592 2.032290 AGTTTTACCGCTTCGCTTCAAC 60.032 45.455 0.00 0.00 0.00 3.18
592 593 2.215196 AGTTTTACCGCTTCGCTTCAA 58.785 42.857 0.00 0.00 0.00 2.69
593 594 1.873698 AGTTTTACCGCTTCGCTTCA 58.126 45.000 0.00 0.00 0.00 3.02
603 604 1.209127 CCCTGCGCAAGTTTTACCG 59.791 57.895 13.05 0.00 41.68 4.02
663 664 1.737838 TTCATGAATGGTGACTCGGC 58.262 50.000 3.38 0.00 0.00 5.54
719 728 1.323271 TGCGTAGAGAAGGAGGGCTG 61.323 60.000 0.00 0.00 0.00 4.85
772 781 8.059461 AGGGGTAGTTTTTATTATCCTTGGAAG 58.941 37.037 0.00 0.00 0.00 3.46
853 862 1.258676 AAACACGAGGAGAGGAGACC 58.741 55.000 0.00 0.00 0.00 3.85
915 928 1.299468 GCTATCGCTCCGAGTGGTG 60.299 63.158 9.08 1.65 39.91 4.17
916 929 2.491022 GGCTATCGCTCCGAGTGGT 61.491 63.158 9.08 4.47 39.91 4.16
917 930 2.336809 GGCTATCGCTCCGAGTGG 59.663 66.667 9.08 0.00 39.91 4.00
922 935 2.465097 CTTCCTCGGCTATCGCTCCG 62.465 65.000 0.00 0.00 46.52 4.63
923 936 1.287503 CTTCCTCGGCTATCGCTCC 59.712 63.158 0.00 0.00 39.05 4.70
924 937 1.173444 TCCTTCCTCGGCTATCGCTC 61.173 60.000 0.00 0.00 39.05 5.03
925 938 0.755698 TTCCTTCCTCGGCTATCGCT 60.756 55.000 0.00 0.00 39.05 4.93
926 939 0.319125 CTTCCTTCCTCGGCTATCGC 60.319 60.000 0.00 0.00 39.05 4.58
927 940 1.319541 TCTTCCTTCCTCGGCTATCG 58.680 55.000 0.00 0.00 40.90 2.92
928 941 2.894126 TGATCTTCCTTCCTCGGCTATC 59.106 50.000 0.00 0.00 0.00 2.08
929 942 2.964209 TGATCTTCCTTCCTCGGCTAT 58.036 47.619 0.00 0.00 0.00 2.97
930 943 2.454336 TGATCTTCCTTCCTCGGCTA 57.546 50.000 0.00 0.00 0.00 3.93
931 944 1.573108 TTGATCTTCCTTCCTCGGCT 58.427 50.000 0.00 0.00 0.00 5.52
932 945 2.010497 GTTTGATCTTCCTTCCTCGGC 58.990 52.381 0.00 0.00 0.00 5.54
933 946 2.094182 TCGTTTGATCTTCCTTCCTCGG 60.094 50.000 0.00 0.00 0.00 4.63
934 947 2.924290 GTCGTTTGATCTTCCTTCCTCG 59.076 50.000 0.00 0.00 0.00 4.63
1040 1053 2.753043 CCTGTGCCTCCACCATGC 60.753 66.667 0.00 0.00 41.35 4.06
1042 1055 4.415150 CGCCTGTGCCTCCACCAT 62.415 66.667 0.00 0.00 41.35 3.55
1159 1172 2.493273 AATGGTTTCGCACGGGGGAT 62.493 55.000 4.81 0.00 35.72 3.85
1179 1195 0.036765 CCCCAGCGTGTGTAGCTAAA 60.037 55.000 0.00 0.00 44.06 1.85
1180 1196 0.901114 TCCCCAGCGTGTGTAGCTAA 60.901 55.000 0.00 0.00 44.06 3.09
1181 1197 1.304630 TCCCCAGCGTGTGTAGCTA 60.305 57.895 0.00 0.00 44.06 3.32
1183 1199 1.601419 TACTCCCCAGCGTGTGTAGC 61.601 60.000 0.00 0.00 0.00 3.58
1184 1200 0.172803 GTACTCCCCAGCGTGTGTAG 59.827 60.000 0.00 0.00 0.00 2.74
1185 1201 0.251474 AGTACTCCCCAGCGTGTGTA 60.251 55.000 0.00 0.00 0.00 2.90
1186 1202 0.251474 TAGTACTCCCCAGCGTGTGT 60.251 55.000 0.00 0.00 0.00 3.72
1187 1203 0.172803 GTAGTACTCCCCAGCGTGTG 59.827 60.000 0.00 0.00 0.00 3.82
1188 1204 0.039326 AGTAGTACTCCCCAGCGTGT 59.961 55.000 0.00 0.00 0.00 4.49
1189 1205 2.048444 TAGTAGTACTCCCCAGCGTG 57.952 55.000 5.96 0.00 0.00 5.34
1190 1206 2.814805 TTAGTAGTACTCCCCAGCGT 57.185 50.000 5.96 0.00 0.00 5.07
1191 1207 3.635373 TCAATTAGTAGTACTCCCCAGCG 59.365 47.826 5.96 0.00 0.00 5.18
1192 1208 4.202233 GGTCAATTAGTAGTACTCCCCAGC 60.202 50.000 5.96 0.00 0.00 4.85
1193 1209 4.960469 TGGTCAATTAGTAGTACTCCCCAG 59.040 45.833 5.96 0.00 0.00 4.45
1194 1210 4.713321 GTGGTCAATTAGTAGTACTCCCCA 59.287 45.833 5.96 2.72 0.00 4.96
1195 1211 4.202090 CGTGGTCAATTAGTAGTACTCCCC 60.202 50.000 5.96 0.18 0.00 4.81
1196 1212 4.735873 GCGTGGTCAATTAGTAGTACTCCC 60.736 50.000 5.96 0.00 0.00 4.30
1197 1213 4.357996 GCGTGGTCAATTAGTAGTACTCC 58.642 47.826 5.96 1.22 0.00 3.85
1198 1214 4.033684 CGCGTGGTCAATTAGTAGTACTC 58.966 47.826 5.96 0.00 0.00 2.59
1199 1215 3.733077 GCGCGTGGTCAATTAGTAGTACT 60.733 47.826 8.43 8.14 0.00 2.73
1200 1216 2.533129 GCGCGTGGTCAATTAGTAGTAC 59.467 50.000 8.43 0.00 0.00 2.73
1210 1226 0.804544 GCTAGTATGCGCGTGGTCAA 60.805 55.000 13.61 0.00 0.00 3.18
1212 1228 1.065928 AGCTAGTATGCGCGTGGTC 59.934 57.895 13.61 2.74 38.13 4.02
1218 1234 1.692296 GCTACTCAGCTAGTATGCGC 58.308 55.000 0.00 0.00 44.93 6.09
1229 1245 2.290367 CGATCCTCAGTCAGCTACTCAG 59.710 54.545 0.00 0.00 35.76 3.35
1231 1247 2.032799 CACGATCCTCAGTCAGCTACTC 59.967 54.545 0.00 0.00 35.76 2.59
1232 1248 2.020720 CACGATCCTCAGTCAGCTACT 58.979 52.381 0.00 0.00 39.81 2.57
1233 1249 1.746220 ACACGATCCTCAGTCAGCTAC 59.254 52.381 0.00 0.00 0.00 3.58
1235 1251 0.814457 GACACGATCCTCAGTCAGCT 59.186 55.000 0.00 0.00 0.00 4.24
1236 1252 0.814457 AGACACGATCCTCAGTCAGC 59.186 55.000 0.00 0.00 33.56 4.26
1242 1258 0.900182 AGCACCAGACACGATCCTCA 60.900 55.000 0.00 0.00 0.00 3.86
1243 1259 0.179124 GAGCACCAGACACGATCCTC 60.179 60.000 0.00 0.00 0.00 3.71
1244 1260 0.613292 AGAGCACCAGACACGATCCT 60.613 55.000 0.00 0.00 0.00 3.24
1245 1261 0.459237 CAGAGCACCAGACACGATCC 60.459 60.000 0.00 0.00 0.00 3.36
1246 1262 0.459237 CCAGAGCACCAGACACGATC 60.459 60.000 0.00 0.00 0.00 3.69
1247 1263 1.188219 ACCAGAGCACCAGACACGAT 61.188 55.000 0.00 0.00 0.00 3.73
1248 1264 1.806461 GACCAGAGCACCAGACACGA 61.806 60.000 0.00 0.00 0.00 4.35
1249 1265 1.373497 GACCAGAGCACCAGACACG 60.373 63.158 0.00 0.00 0.00 4.49
1250 1266 1.373497 CGACCAGAGCACCAGACAC 60.373 63.158 0.00 0.00 0.00 3.67
1251 1267 1.832608 ACGACCAGAGCACCAGACA 60.833 57.895 0.00 0.00 0.00 3.41
1252 1268 1.373497 CACGACCAGAGCACCAGAC 60.373 63.158 0.00 0.00 0.00 3.51
1253 1269 3.051210 CACGACCAGAGCACCAGA 58.949 61.111 0.00 0.00 0.00 3.86
1254 1270 2.740055 GCACGACCAGAGCACCAG 60.740 66.667 0.00 0.00 36.42 4.00
1255 1271 3.519973 CTGCACGACCAGAGCACCA 62.520 63.158 0.00 0.00 41.41 4.17
1256 1272 2.740055 CTGCACGACCAGAGCACC 60.740 66.667 0.00 0.00 41.41 5.01
1389 1431 4.464597 AGAGAGCGGATAAGGGTGATAATC 59.535 45.833 0.00 0.00 0.00 1.75
1392 1434 3.527507 AGAGAGCGGATAAGGGTGATA 57.472 47.619 0.00 0.00 0.00 2.15
1486 1558 1.433471 GCTCCCAGCGCCATTAAAC 59.567 57.895 2.29 0.00 0.00 2.01
1554 1626 2.110006 GCTAGTAGCAGGCCTGGC 59.890 66.667 33.46 24.33 41.89 4.85
1555 1627 1.445095 CAGCTAGTAGCAGGCCTGG 59.555 63.158 33.46 16.90 45.56 4.45
1556 1628 1.227497 GCAGCTAGTAGCAGGCCTG 60.227 63.158 29.34 29.34 45.56 4.85
1557 1629 2.790791 CGCAGCTAGTAGCAGGCCT 61.791 63.158 23.77 0.00 45.56 5.19
1572 1654 1.609635 TTATCTGGCCCGAAGACGCA 61.610 55.000 0.00 0.00 38.29 5.24
1688 1770 6.401153 CGGCTACTGTTCTGTTATCTGAAAAC 60.401 42.308 0.00 0.00 34.32 2.43
1712 1794 0.109458 TGTTGCTACCTCGTACTGCG 60.109 55.000 0.00 0.00 43.01 5.18
1720 1802 4.444720 GCGTATCAATACTGTTGCTACCTC 59.555 45.833 0.00 0.00 0.00 3.85
1722 1804 3.181774 CGCGTATCAATACTGTTGCTACC 59.818 47.826 0.00 0.00 0.00 3.18
1723 1805 3.361724 GCGCGTATCAATACTGTTGCTAC 60.362 47.826 8.43 0.00 0.00 3.58
1736 1824 2.945576 GTACGTGCGCGCGTATCA 60.946 61.111 45.62 31.26 46.81 2.15
1765 1863 2.989840 GTGAACTGATGAGGAAGACACG 59.010 50.000 0.00 0.00 0.00 4.49
1767 1865 2.029020 CGGTGAACTGATGAGGAAGACA 60.029 50.000 0.00 0.00 0.00 3.41
1805 1923 1.037579 GCCCCTGGGTGTAATTGCTC 61.038 60.000 12.71 0.00 37.65 4.26
1812 1930 3.095421 CATTGGCCCCTGGGTGTA 58.905 61.111 12.71 0.00 37.65 2.90
1844 1962 3.245122 ACGACTCTTCTTCCTCCTCTTCT 60.245 47.826 0.00 0.00 0.00 2.85
1848 1966 1.746787 GGACGACTCTTCTTCCTCCTC 59.253 57.143 0.00 0.00 37.23 3.71
1849 1967 1.075698 TGGACGACTCTTCTTCCTCCT 59.924 52.381 0.00 0.00 40.25 3.69
1850 1968 1.546961 TGGACGACTCTTCTTCCTCC 58.453 55.000 0.00 0.00 40.25 4.30
1890 2008 3.242543 GCGTGCAGAGACTATTCCAATTG 60.243 47.826 0.00 0.00 0.00 2.32
1893 2011 1.735700 CGCGTGCAGAGACTATTCCAA 60.736 52.381 0.00 0.00 0.00 3.53
1894 2012 0.179137 CGCGTGCAGAGACTATTCCA 60.179 55.000 0.00 0.00 0.00 3.53
1910 2028 3.099619 GACACATCCCACATGCGCG 62.100 63.158 0.00 0.00 0.00 6.86
1944 2062 5.555017 GACCATCGTAGTCCTAGTACCATA 58.445 45.833 0.00 0.00 0.00 2.74
2129 2247 2.122813 ATCTCCCCCGAATCGCCT 60.123 61.111 0.00 0.00 0.00 5.52
2375 2544 5.176774 TCATCATTCATTGTTCGCCGTATAC 59.823 40.000 0.00 0.00 0.00 1.47
2376 2545 5.176774 GTCATCATTCATTGTTCGCCGTATA 59.823 40.000 0.00 0.00 0.00 1.47
2377 2546 4.024893 GTCATCATTCATTGTTCGCCGTAT 60.025 41.667 0.00 0.00 0.00 3.06
2378 2547 3.308595 GTCATCATTCATTGTTCGCCGTA 59.691 43.478 0.00 0.00 0.00 4.02
2379 2548 2.095853 GTCATCATTCATTGTTCGCCGT 59.904 45.455 0.00 0.00 0.00 5.68
2380 2549 2.539547 GGTCATCATTCATTGTTCGCCG 60.540 50.000 0.00 0.00 0.00 6.46
2381 2550 2.223572 GGGTCATCATTCATTGTTCGCC 60.224 50.000 0.00 0.00 0.00 5.54
2382 2551 2.223572 GGGGTCATCATTCATTGTTCGC 60.224 50.000 0.00 0.00 0.00 4.70
2383 2552 2.032054 CGGGGTCATCATTCATTGTTCG 59.968 50.000 0.00 0.00 0.00 3.95
2384 2553 2.358898 CCGGGGTCATCATTCATTGTTC 59.641 50.000 0.00 0.00 0.00 3.18
2385 2554 2.378038 CCGGGGTCATCATTCATTGTT 58.622 47.619 0.00 0.00 0.00 2.83
2386 2555 2.023788 GCCGGGGTCATCATTCATTGT 61.024 52.381 2.18 0.00 0.00 2.71
2387 2556 0.670162 GCCGGGGTCATCATTCATTG 59.330 55.000 2.18 0.00 0.00 2.82
2427 2601 0.103208 AGCGTACAGATACTGCAGGC 59.897 55.000 19.93 8.20 38.45 4.85
2443 2617 3.519579 ACATGAACAGATCAGAGAAGCG 58.480 45.455 0.00 0.00 42.53 4.68
2454 2636 5.988287 TGCCAGTCATATAACATGAACAGA 58.012 37.500 0.00 0.00 0.00 3.41
2459 2641 6.484308 CACAAGATGCCAGTCATATAACATGA 59.516 38.462 0.00 0.00 35.05 3.07
2461 2643 6.872628 CACAAGATGCCAGTCATATAACAT 57.127 37.500 0.00 0.00 35.05 2.71
2476 2658 2.208431 GCCTAGTAGCAGCACAAGATG 58.792 52.381 0.00 0.00 0.00 2.90
2477 2659 1.833630 TGCCTAGTAGCAGCACAAGAT 59.166 47.619 0.00 0.00 38.00 2.40
2478 2660 1.266178 TGCCTAGTAGCAGCACAAGA 58.734 50.000 0.00 0.00 38.00 3.02
2479 2661 3.840831 TGCCTAGTAGCAGCACAAG 57.159 52.632 0.00 0.00 38.00 3.16
2593 2780 0.617413 AAGTGCAGGGTGGAGATCAG 59.383 55.000 0.00 0.00 0.00 2.90
2594 2781 0.325933 CAAGTGCAGGGTGGAGATCA 59.674 55.000 0.00 0.00 0.00 2.92
2595 2782 1.028868 GCAAGTGCAGGGTGGAGATC 61.029 60.000 0.00 0.00 41.59 2.75
2596 2783 1.001641 GCAAGTGCAGGGTGGAGAT 60.002 57.895 0.00 0.00 41.59 2.75
2597 2784 2.431683 GCAAGTGCAGGGTGGAGA 59.568 61.111 0.00 0.00 41.59 3.71
2606 2793 6.425776 GAGATGAGAATGATCTGCAAGTGCA 61.426 44.000 5.74 5.74 39.87 4.57
2613 2800 3.743911 CAGCTGAGATGAGAATGATCTGC 59.256 47.826 8.42 0.00 39.87 4.26
2630 2817 1.808945 GAATCACCCTTGTCACAGCTG 59.191 52.381 13.48 13.48 0.00 4.24
2636 2823 2.092429 GCCTATGGAATCACCCTTGTCA 60.092 50.000 0.00 0.00 38.00 3.58
2644 2831 2.175878 ATCAGCGCCTATGGAATCAC 57.824 50.000 2.29 0.00 0.00 3.06
2657 2844 6.544038 TTGGTACATCATTTGATATCAGCG 57.456 37.500 5.39 0.00 39.30 5.18
2659 2846 7.449395 ACCCATTGGTACATCATTTGATATCAG 59.551 37.037 5.39 0.00 45.45 2.90
2683 2882 3.876274 TGTGCTCAGAGATTCAGTACC 57.124 47.619 0.00 0.00 0.00 3.34
2684 2883 6.256757 GGTTAATGTGCTCAGAGATTCAGTAC 59.743 42.308 0.00 0.00 0.00 2.73
2831 3053 6.458751 CGGAAATCACCTCACCTTCATTAATG 60.459 42.308 9.29 9.29 0.00 1.90
2860 3082 4.083431 CCGTCCCATACTCGAGTGTATAAG 60.083 50.000 28.12 9.22 32.48 1.73
2867 3089 1.681793 CAATCCGTCCCATACTCGAGT 59.318 52.381 23.66 23.66 0.00 4.18
2924 3146 2.144078 ATCCACCACCACCACACGA 61.144 57.895 0.00 0.00 0.00 4.35
2966 3188 6.188400 AGAAGTTTTATAGCTGCAGAAAGC 57.812 37.500 20.43 10.93 43.88 3.51
2978 3200 4.291249 AGGGGCTCACCAAGAAGTTTTATA 59.709 41.667 0.00 0.00 42.91 0.98
3009 3231 8.249638 TCACATTTCATGTAGAGAGAAGAGAAG 58.750 37.037 0.00 0.00 42.70 2.85
3016 3238 9.770097 GGATTATTCACATTTCATGTAGAGAGA 57.230 33.333 0.00 0.00 42.70 3.10
3017 3239 9.775854 AGGATTATTCACATTTCATGTAGAGAG 57.224 33.333 0.00 0.00 42.70 3.20
3054 3276 1.312815 GCACAAGCTCCAAGTTGAGT 58.687 50.000 3.87 0.00 37.91 3.41
3086 3308 8.934697 TCCATTTATTTACTGGACTACTGCTAT 58.065 33.333 0.00 0.00 34.17 2.97
3092 3314 6.771267 CCCCTTCCATTTATTTACTGGACTAC 59.229 42.308 0.00 0.00 38.75 2.73
3133 3355 1.431496 CGTGTCAGCATCACACATCA 58.569 50.000 11.87 0.00 43.79 3.07
3149 3371 6.364706 GCAAGACTATGAGAGATTATTCCGTG 59.635 42.308 0.00 0.00 0.00 4.94
3151 3373 5.866633 GGCAAGACTATGAGAGATTATTCCG 59.133 44.000 0.00 0.00 0.00 4.30
3227 3449 6.727824 ACATGTTGTCACTTATCACTAAGC 57.272 37.500 0.00 0.00 38.33 3.09
3253 3475 8.783660 ATAAAACATGATGGTCCTCTACTCTA 57.216 34.615 0.00 0.00 0.00 2.43
3254 3476 7.682787 ATAAAACATGATGGTCCTCTACTCT 57.317 36.000 0.00 0.00 0.00 3.24
3255 3477 7.987458 TCAATAAAACATGATGGTCCTCTACTC 59.013 37.037 0.00 0.00 0.00 2.59
3297 3519 1.852067 AATTTGTCACGCTCACGGGC 61.852 55.000 0.00 0.00 44.44 6.13
3350 3573 5.998363 ACCTTTATGCAATTAGCTAGTAGCC 59.002 40.000 18.65 2.81 43.77 3.93
3453 3676 1.004277 CGTCTCTCTGTGGCGTGAAC 61.004 60.000 0.00 0.00 0.00 3.18
3589 3812 4.908687 ACAACGTCAGCTGCGGCA 62.909 61.111 26.36 1.29 41.70 5.69
3654 3877 3.009143 AGCTAGGGTTGTTTCACCTTAGG 59.991 47.826 10.16 0.00 43.62 2.69
3706 3931 7.013750 TCTCATTCATCTGTCCTAGTCACATAC 59.986 40.741 0.00 0.00 0.00 2.39
3795 4138 6.603599 AGGGTTTGCAATTAGGATTCTTCTAC 59.396 38.462 0.00 0.00 0.00 2.59
3842 4185 6.763355 AGCCTAGGTTGATGTATTCATGTAG 58.237 40.000 11.31 0.00 33.34 2.74
3877 4220 6.801539 TTACAGCAAGTATGTTCAAAGAGG 57.198 37.500 0.00 0.00 31.53 3.69
4300 4714 9.679661 TGTAGAAATCCTGCAGAATATACAAAA 57.320 29.630 17.39 0.00 32.40 2.44
4376 4790 7.285858 TGCCTGATCAATCATCATCATTTTACA 59.714 33.333 0.00 0.00 40.95 2.41
4432 4853 6.819397 AAAGATTAACAAAGACTACTGGGC 57.181 37.500 0.00 0.00 0.00 5.36
4473 5249 1.165270 ATTGACAAACCTAGCGGTGC 58.835 50.000 0.00 0.00 44.73 5.01
4576 5365 9.931210 GAAGAAATTATACGTTTACAGAATGGG 57.069 33.333 0.00 0.00 43.62 4.00
4678 5467 9.601217 GAGAATAGCTTAATGTGGAACTTCTAA 57.399 33.333 0.00 0.00 38.04 2.10
4684 5473 8.718102 TTGTAGAGAATAGCTTAATGTGGAAC 57.282 34.615 0.00 0.00 37.35 3.62
4689 5478 8.486210 TGTGGATTGTAGAGAATAGCTTAATGT 58.514 33.333 0.00 0.00 0.00 2.71
4705 5494 7.715249 GTGGAGATTAGCTTAATGTGGATTGTA 59.285 37.037 0.00 0.00 0.00 2.41
4717 5506 5.692115 TGTGGATTGTGGAGATTAGCTTA 57.308 39.130 0.00 0.00 0.00 3.09
4718 5507 4.574674 TGTGGATTGTGGAGATTAGCTT 57.425 40.909 0.00 0.00 0.00 3.74
4719 5508 4.785346 ATGTGGATTGTGGAGATTAGCT 57.215 40.909 0.00 0.00 0.00 3.32
4743 5532 7.345914 ACCTCTGGATTATTAGACTAAACAGCT 59.654 37.037 0.00 0.00 0.00 4.24
4777 5568 4.729868 AGAAACAAGGCCAGAATTAGTGT 58.270 39.130 5.01 0.00 0.00 3.55
4880 5671 1.149174 GCAATAGCAGCTGCCCCTA 59.851 57.895 34.39 20.94 43.38 3.53
4905 5696 1.699634 CACCCTCTCCACCAAGAAAGA 59.300 52.381 0.00 0.00 0.00 2.52
4906 5697 1.699634 TCACCCTCTCCACCAAGAAAG 59.300 52.381 0.00 0.00 0.00 2.62
4907 5698 1.699634 CTCACCCTCTCCACCAAGAAA 59.300 52.381 0.00 0.00 0.00 2.52
4908 5699 1.132849 TCTCACCCTCTCCACCAAGAA 60.133 52.381 0.00 0.00 0.00 2.52
5064 5855 5.877012 TGCTGAGATACACAGGAAAAATCTC 59.123 40.000 0.00 0.00 41.82 2.75
5120 5937 5.246145 ACTAGCACTGTAATCTTACGACC 57.754 43.478 0.00 0.00 36.45 4.79
5177 6000 3.672767 ACCGATGTAACTCCGTTTTCT 57.327 42.857 0.00 0.00 0.00 2.52
5178 6001 4.488879 ACTACCGATGTAACTCCGTTTTC 58.511 43.478 0.00 0.00 0.00 2.29
5183 6006 4.103357 CAGAAACTACCGATGTAACTCCG 58.897 47.826 0.00 0.00 0.00 4.63
5184 6007 5.320549 TCAGAAACTACCGATGTAACTCC 57.679 43.478 0.00 0.00 0.00 3.85
5185 6008 6.388278 AGTTCAGAAACTACCGATGTAACTC 58.612 40.000 0.00 0.00 43.98 3.01
5210 6033 4.219288 CCAGGCTGTTCTTTTTCATAGCTT 59.781 41.667 14.43 0.00 0.00 3.74
5212 6035 3.507622 ACCAGGCTGTTCTTTTTCATAGC 59.492 43.478 14.43 0.00 0.00 2.97
5213 6036 5.241506 TGAACCAGGCTGTTCTTTTTCATAG 59.758 40.000 21.79 4.75 43.96 2.23
5214 6037 5.136828 TGAACCAGGCTGTTCTTTTTCATA 58.863 37.500 21.79 5.38 43.96 2.15
5215 6038 3.960102 TGAACCAGGCTGTTCTTTTTCAT 59.040 39.130 21.79 0.00 43.96 2.57
5216 6039 3.360867 TGAACCAGGCTGTTCTTTTTCA 58.639 40.909 21.79 14.00 43.96 2.69
5217 6040 3.243535 CCTGAACCAGGCTGTTCTTTTTC 60.244 47.826 21.79 12.26 45.13 2.29
5279 6104 2.047274 CGGTGTGCCAAGATCGGT 60.047 61.111 0.00 0.00 34.09 4.69
5355 6180 4.731503 CGCAGCAGCAGTTCACGC 62.732 66.667 0.82 0.00 42.27 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.