Multiple sequence alignment - TraesCS2D01G354500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G354500 chr2D 100.000 2672 0 0 1 2672 455346352 455349023 0.000000e+00 4935.0
1 TraesCS2D01G354500 chr3D 96.004 901 32 2 816 1714 514642635 514643533 0.000000e+00 1461.0
2 TraesCS2D01G354500 chr3D 79.398 432 58 23 1746 2160 18287941 18288358 2.620000e-70 276.0
3 TraesCS2D01G354500 chr3D 77.447 470 69 26 1746 2198 177657528 177657079 2.050000e-61 246.0
4 TraesCS2D01G354500 chr2B 96.226 689 25 1 1027 1714 773940161 773939473 0.000000e+00 1127.0
5 TraesCS2D01G354500 chr2A 93.218 693 30 12 2 680 105484757 105484068 0.000000e+00 1003.0
6 TraesCS2D01G354500 chr2A 91.040 692 43 13 2 683 703117396 703116714 0.000000e+00 917.0
7 TraesCS2D01G354500 chr2A 97.130 453 13 0 1260 1712 13113042 13112590 0.000000e+00 765.0
8 TraesCS2D01G354500 chr2A 82.436 353 44 15 1761 2103 516302320 516301976 2.600000e-75 292.0
9 TraesCS2D01G354500 chr5A 93.179 689 32 13 2 680 666961261 666960578 0.000000e+00 998.0
10 TraesCS2D01G354500 chr5A 91.813 684 38 14 2 674 468927353 468928029 0.000000e+00 937.0
11 TraesCS2D01G354500 chr4A 93.074 693 30 12 2 680 105179027 105178339 0.000000e+00 998.0
12 TraesCS2D01G354500 chr6A 92.619 691 35 13 2 680 611942307 611941621 0.000000e+00 979.0
13 TraesCS2D01G354500 chr6A 92.701 685 33 14 2 674 608795216 608795895 0.000000e+00 972.0
14 TraesCS2D01G354500 chr6A 78.389 509 80 25 1747 2244 93623277 93622788 1.200000e-78 303.0
15 TraesCS2D01G354500 chr1A 92.972 683 30 11 2 674 36175702 36176376 0.000000e+00 979.0
16 TraesCS2D01G354500 chr7A 92.240 683 38 12 2 674 681244815 681244138 0.000000e+00 953.0
17 TraesCS2D01G354500 chr7A 77.249 567 88 27 1746 2278 446364783 446364224 7.230000e-76 294.0
18 TraesCS2D01G354500 chr7A 73.684 266 61 8 1454 1714 347148371 347148110 7.870000e-16 95.3
19 TraesCS2D01G354500 chr7A 73.780 164 41 1 1454 1617 139634323 139634162 2.220000e-06 63.9
20 TraesCS2D01G354500 chr4B 92.723 426 29 2 1291 1714 40911591 40911166 4.890000e-172 614.0
21 TraesCS2D01G354500 chr6B 80.292 548 87 19 1747 2281 682568191 682567652 6.930000e-106 394.0
22 TraesCS2D01G354500 chr7D 79.346 581 86 27 1716 2279 97942780 97943343 6.980000e-101 377.0
23 TraesCS2D01G354500 chr5D 77.980 495 77 26 1729 2204 340100686 340101167 5.630000e-72 281.0
24 TraesCS2D01G354500 chr3B 78.205 468 64 29 1748 2198 256412386 256411940 5.670000e-67 265.0
25 TraesCS2D01G354500 chr3B 72.830 265 63 7 1454 1713 506980264 506980004 6.130000e-12 82.4
26 TraesCS2D01G354500 chr4D 72.963 270 61 10 1454 1716 218122066 218121802 1.700000e-12 84.2
27 TraesCS2D01G354500 chr4D 76.296 135 30 2 1454 1587 218258675 218258808 1.330000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G354500 chr2D 455346352 455349023 2671 False 4935 4935 100.000 1 2672 1 chr2D.!!$F1 2671
1 TraesCS2D01G354500 chr3D 514642635 514643533 898 False 1461 1461 96.004 816 1714 1 chr3D.!!$F2 898
2 TraesCS2D01G354500 chr2B 773939473 773940161 688 True 1127 1127 96.226 1027 1714 1 chr2B.!!$R1 687
3 TraesCS2D01G354500 chr2A 105484068 105484757 689 True 1003 1003 93.218 2 680 1 chr2A.!!$R2 678
4 TraesCS2D01G354500 chr2A 703116714 703117396 682 True 917 917 91.040 2 683 1 chr2A.!!$R4 681
5 TraesCS2D01G354500 chr5A 666960578 666961261 683 True 998 998 93.179 2 680 1 chr5A.!!$R1 678
6 TraesCS2D01G354500 chr5A 468927353 468928029 676 False 937 937 91.813 2 674 1 chr5A.!!$F1 672
7 TraesCS2D01G354500 chr4A 105178339 105179027 688 True 998 998 93.074 2 680 1 chr4A.!!$R1 678
8 TraesCS2D01G354500 chr6A 611941621 611942307 686 True 979 979 92.619 2 680 1 chr6A.!!$R2 678
9 TraesCS2D01G354500 chr6A 608795216 608795895 679 False 972 972 92.701 2 674 1 chr6A.!!$F1 672
10 TraesCS2D01G354500 chr1A 36175702 36176376 674 False 979 979 92.972 2 674 1 chr1A.!!$F1 672
11 TraesCS2D01G354500 chr7A 681244138 681244815 677 True 953 953 92.240 2 674 1 chr7A.!!$R4 672
12 TraesCS2D01G354500 chr7A 446364224 446364783 559 True 294 294 77.249 1746 2278 1 chr7A.!!$R3 532
13 TraesCS2D01G354500 chr6B 682567652 682568191 539 True 394 394 80.292 1747 2281 1 chr6B.!!$R1 534
14 TraesCS2D01G354500 chr7D 97942780 97943343 563 False 377 377 79.346 1716 2279 1 chr7D.!!$F1 563

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
771 800 0.033642 GGGAGAACCGGGATTCGATC 59.966 60.0 6.32 0.0 42.43 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2506 2742 0.040958 CGAATCCTATTTGGCGCTGC 60.041 55.0 7.64 0.0 35.26 5.25 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
301 321 5.229423 TCCTTTTGAAATTCCGAGCATTTG 58.771 37.500 0.00 0.00 0.00 2.32
528 557 2.034221 GGACAAGTGTCAGGGCCC 59.966 66.667 16.46 16.46 46.47 5.80
623 652 2.157640 AGCATAGCTCAGGTGAGTCT 57.842 50.000 8.74 8.54 43.85 3.24
629 658 2.396608 AGCTCAGGTGAGTCTATGCAT 58.603 47.619 3.79 3.79 43.85 3.96
677 706 2.338620 GGGAACTTTTGCCCGCAC 59.661 61.111 0.00 0.00 34.68 5.34
680 709 4.279043 AACTTTTGCCCGCACGCC 62.279 61.111 0.00 0.00 0.00 5.68
690 719 2.125713 CGCACGCCTCACCACATA 60.126 61.111 0.00 0.00 0.00 2.29
691 720 2.167219 CGCACGCCTCACCACATAG 61.167 63.158 0.00 0.00 0.00 2.23
692 721 1.815421 GCACGCCTCACCACATAGG 60.815 63.158 0.00 0.00 45.67 2.57
696 725 2.505982 CCTCACCACATAGGCCGG 59.494 66.667 0.00 0.00 43.14 6.13
697 726 2.203070 CTCACCACATAGGCCGGC 60.203 66.667 21.18 21.18 43.14 6.13
698 727 3.757248 CTCACCACATAGGCCGGCC 62.757 68.421 39.29 39.29 43.14 6.13
699 728 4.875713 CACCACATAGGCCGGCCC 62.876 72.222 41.72 23.87 43.14 5.80
701 730 4.569180 CCACATAGGCCGGCCCAG 62.569 72.222 41.72 31.50 36.58 4.45
704 733 4.504596 CATAGGCCGGCCCAGCAA 62.505 66.667 41.72 22.19 36.58 3.91
705 734 3.738481 ATAGGCCGGCCCAGCAAA 61.738 61.111 41.72 20.30 36.58 3.68
706 735 4.733542 TAGGCCGGCCCAGCAAAC 62.734 66.667 41.72 14.89 36.58 2.93
710 739 3.989787 CCGGCCCAGCAAACCAAC 61.990 66.667 0.00 0.00 0.00 3.77
711 740 3.222855 CGGCCCAGCAAACCAACA 61.223 61.111 0.00 0.00 0.00 3.33
712 741 2.736531 GGCCCAGCAAACCAACAG 59.263 61.111 0.00 0.00 0.00 3.16
713 742 1.832167 GGCCCAGCAAACCAACAGA 60.832 57.895 0.00 0.00 0.00 3.41
714 743 1.398958 GGCCCAGCAAACCAACAGAA 61.399 55.000 0.00 0.00 0.00 3.02
715 744 0.463620 GCCCAGCAAACCAACAGAAA 59.536 50.000 0.00 0.00 0.00 2.52
716 745 1.134551 GCCCAGCAAACCAACAGAAAA 60.135 47.619 0.00 0.00 0.00 2.29
717 746 2.679349 GCCCAGCAAACCAACAGAAAAA 60.679 45.455 0.00 0.00 0.00 1.94
718 747 3.197265 CCCAGCAAACCAACAGAAAAAG 58.803 45.455 0.00 0.00 0.00 2.27
719 748 3.118811 CCCAGCAAACCAACAGAAAAAGA 60.119 43.478 0.00 0.00 0.00 2.52
720 749 4.502962 CCAGCAAACCAACAGAAAAAGAA 58.497 39.130 0.00 0.00 0.00 2.52
721 750 4.934602 CCAGCAAACCAACAGAAAAAGAAA 59.065 37.500 0.00 0.00 0.00 2.52
722 751 5.411053 CCAGCAAACCAACAGAAAAAGAAAA 59.589 36.000 0.00 0.00 0.00 2.29
723 752 6.072783 CCAGCAAACCAACAGAAAAAGAAAAA 60.073 34.615 0.00 0.00 0.00 1.94
724 753 6.796552 CAGCAAACCAACAGAAAAAGAAAAAC 59.203 34.615 0.00 0.00 0.00 2.43
725 754 6.710295 AGCAAACCAACAGAAAAAGAAAAACT 59.290 30.769 0.00 0.00 0.00 2.66
726 755 6.796552 GCAAACCAACAGAAAAAGAAAAACTG 59.203 34.615 0.00 0.00 35.14 3.16
727 756 6.480524 AACCAACAGAAAAAGAAAAACTGC 57.519 33.333 0.00 0.00 32.67 4.40
728 757 4.625311 ACCAACAGAAAAAGAAAAACTGCG 59.375 37.500 0.00 0.00 32.67 5.18
729 758 4.862018 CCAACAGAAAAAGAAAAACTGCGA 59.138 37.500 0.00 0.00 32.67 5.10
730 759 5.004726 CCAACAGAAAAAGAAAAACTGCGAG 59.995 40.000 0.00 0.00 32.67 5.03
731 760 5.560966 ACAGAAAAAGAAAAACTGCGAGA 57.439 34.783 0.00 0.00 32.67 4.04
732 761 6.136541 ACAGAAAAAGAAAAACTGCGAGAT 57.863 33.333 0.00 0.00 32.67 2.75
733 762 7.259290 ACAGAAAAAGAAAAACTGCGAGATA 57.741 32.000 0.00 0.00 32.67 1.98
734 763 7.703328 ACAGAAAAAGAAAAACTGCGAGATAA 58.297 30.769 0.00 0.00 32.67 1.75
735 764 8.188139 ACAGAAAAAGAAAAACTGCGAGATAAA 58.812 29.630 0.00 0.00 32.67 1.40
736 765 9.019764 CAGAAAAAGAAAAACTGCGAGATAAAA 57.980 29.630 0.00 0.00 0.00 1.52
737 766 9.020813 AGAAAAAGAAAAACTGCGAGATAAAAC 57.979 29.630 0.00 0.00 0.00 2.43
738 767 6.969669 AAAGAAAAACTGCGAGATAAAACG 57.030 33.333 0.00 0.00 0.00 3.60
739 768 5.668558 AGAAAAACTGCGAGATAAAACGT 57.331 34.783 0.00 0.00 0.00 3.99
740 769 6.056428 AGAAAAACTGCGAGATAAAACGTT 57.944 33.333 0.00 0.00 0.00 3.99
741 770 6.134061 AGAAAAACTGCGAGATAAAACGTTC 58.866 36.000 0.00 0.00 0.00 3.95
742 771 5.412526 AAAACTGCGAGATAAAACGTTCA 57.587 34.783 0.00 0.00 0.00 3.18
743 772 5.607119 AAACTGCGAGATAAAACGTTCAT 57.393 34.783 0.00 0.00 0.00 2.57
744 773 4.584029 ACTGCGAGATAAAACGTTCATG 57.416 40.909 0.00 0.00 0.00 3.07
745 774 3.994392 ACTGCGAGATAAAACGTTCATGT 59.006 39.130 0.00 0.00 0.00 3.21
746 775 4.451096 ACTGCGAGATAAAACGTTCATGTT 59.549 37.500 0.00 0.00 0.00 2.71
747 776 5.049680 ACTGCGAGATAAAACGTTCATGTTT 60.050 36.000 0.00 0.00 43.60 2.83
748 777 6.146510 ACTGCGAGATAAAACGTTCATGTTTA 59.853 34.615 0.00 0.00 41.01 2.01
749 778 6.301108 TGCGAGATAAAACGTTCATGTTTAC 58.699 36.000 0.00 0.00 41.01 2.01
750 779 6.146510 TGCGAGATAAAACGTTCATGTTTACT 59.853 34.615 0.00 0.00 41.01 2.24
751 780 6.677411 GCGAGATAAAACGTTCATGTTTACTC 59.323 38.462 0.00 5.51 41.01 2.59
752 781 6.887763 CGAGATAAAACGTTCATGTTTACTCG 59.112 38.462 20.69 20.69 43.76 4.18
753 782 7.057149 AGATAAAACGTTCATGTTTACTCGG 57.943 36.000 0.00 0.00 41.01 4.63
754 783 4.477302 AAAACGTTCATGTTTACTCGGG 57.523 40.909 0.00 0.00 41.01 5.14
755 784 3.389925 AACGTTCATGTTTACTCGGGA 57.610 42.857 0.00 0.00 0.00 5.14
756 785 2.955614 ACGTTCATGTTTACTCGGGAG 58.044 47.619 0.00 0.00 0.00 4.30
757 786 2.559668 ACGTTCATGTTTACTCGGGAGA 59.440 45.455 2.08 0.00 37.31 3.71
758 787 3.006110 ACGTTCATGTTTACTCGGGAGAA 59.994 43.478 2.08 0.00 39.18 2.87
759 788 3.367025 CGTTCATGTTTACTCGGGAGAAC 59.633 47.826 2.08 0.00 39.18 3.01
760 789 3.604875 TCATGTTTACTCGGGAGAACC 57.395 47.619 2.08 0.00 39.18 3.62
769 798 3.625099 GGGAGAACCGGGATTCGA 58.375 61.111 6.32 0.00 42.43 3.71
770 799 2.134092 GGGAGAACCGGGATTCGAT 58.866 57.895 6.32 0.00 42.43 3.59
771 800 0.033642 GGGAGAACCGGGATTCGATC 59.966 60.000 6.32 0.00 42.43 3.69
772 801 1.041437 GGAGAACCGGGATTCGATCT 58.959 55.000 6.32 0.00 42.43 2.75
773 802 1.000052 GGAGAACCGGGATTCGATCTC 60.000 57.143 6.32 6.82 43.92 2.75
774 803 1.957877 GAGAACCGGGATTCGATCTCT 59.042 52.381 6.32 0.00 42.68 3.10
775 804 1.683917 AGAACCGGGATTCGATCTCTG 59.316 52.381 6.32 0.00 42.43 3.35
776 805 1.681793 GAACCGGGATTCGATCTCTGA 59.318 52.381 6.32 0.00 42.43 3.27
777 806 1.776662 ACCGGGATTCGATCTCTGAA 58.223 50.000 6.32 0.00 42.43 3.02
778 807 1.409427 ACCGGGATTCGATCTCTGAAC 59.591 52.381 6.32 0.00 42.43 3.18
779 808 1.600663 CCGGGATTCGATCTCTGAACG 60.601 57.143 0.00 0.00 42.43 3.95
780 809 1.600663 CGGGATTCGATCTCTGAACGG 60.601 57.143 0.00 0.00 42.43 4.44
781 810 1.492720 GGATTCGATCTCTGAACGGC 58.507 55.000 0.00 0.00 0.00 5.68
782 811 1.202417 GGATTCGATCTCTGAACGGCA 60.202 52.381 0.00 0.00 0.00 5.69
783 812 2.540515 GATTCGATCTCTGAACGGCAA 58.459 47.619 0.00 0.00 0.00 4.52
784 813 2.672961 TTCGATCTCTGAACGGCAAT 57.327 45.000 0.00 0.00 0.00 3.56
785 814 1.926561 TCGATCTCTGAACGGCAATG 58.073 50.000 0.00 0.00 0.00 2.82
786 815 1.204704 TCGATCTCTGAACGGCAATGT 59.795 47.619 0.00 0.00 0.00 2.71
787 816 2.425668 TCGATCTCTGAACGGCAATGTA 59.574 45.455 0.00 0.00 0.00 2.29
788 817 3.068165 TCGATCTCTGAACGGCAATGTAT 59.932 43.478 0.00 0.00 0.00 2.29
789 818 4.277423 TCGATCTCTGAACGGCAATGTATA 59.723 41.667 0.00 0.00 0.00 1.47
790 819 5.048013 TCGATCTCTGAACGGCAATGTATAT 60.048 40.000 0.00 0.00 0.00 0.86
791 820 5.061435 CGATCTCTGAACGGCAATGTATATG 59.939 44.000 0.00 0.00 0.00 1.78
792 821 5.276461 TCTCTGAACGGCAATGTATATGT 57.724 39.130 0.00 0.00 0.00 2.29
793 822 5.289595 TCTCTGAACGGCAATGTATATGTC 58.710 41.667 0.00 0.00 0.00 3.06
794 823 5.069119 TCTCTGAACGGCAATGTATATGTCT 59.931 40.000 0.00 0.00 0.00 3.41
795 824 6.264518 TCTCTGAACGGCAATGTATATGTCTA 59.735 38.462 0.00 0.00 0.00 2.59
796 825 6.213677 TCTGAACGGCAATGTATATGTCTAC 58.786 40.000 0.00 0.00 0.00 2.59
797 826 6.040504 TCTGAACGGCAATGTATATGTCTACT 59.959 38.462 0.00 0.00 0.00 2.57
798 827 6.213677 TGAACGGCAATGTATATGTCTACTC 58.786 40.000 0.00 0.00 0.00 2.59
799 828 6.040504 TGAACGGCAATGTATATGTCTACTCT 59.959 38.462 0.00 0.00 0.00 3.24
800 829 6.015027 ACGGCAATGTATATGTCTACTCTC 57.985 41.667 0.00 0.00 0.00 3.20
801 830 5.089411 CGGCAATGTATATGTCTACTCTCG 58.911 45.833 0.00 0.00 0.00 4.04
802 831 4.859798 GGCAATGTATATGTCTACTCTCGC 59.140 45.833 0.00 0.00 0.00 5.03
803 832 5.336055 GGCAATGTATATGTCTACTCTCGCT 60.336 44.000 0.00 0.00 0.00 4.93
804 833 6.127980 GGCAATGTATATGTCTACTCTCGCTA 60.128 42.308 0.00 0.00 0.00 4.26
805 834 7.306213 GCAATGTATATGTCTACTCTCGCTAA 58.694 38.462 0.00 0.00 0.00 3.09
806 835 7.271653 GCAATGTATATGTCTACTCTCGCTAAC 59.728 40.741 0.00 0.00 0.00 2.34
807 836 6.798315 TGTATATGTCTACTCTCGCTAACC 57.202 41.667 0.00 0.00 0.00 2.85
808 837 6.293698 TGTATATGTCTACTCTCGCTAACCA 58.706 40.000 0.00 0.00 0.00 3.67
809 838 6.940867 TGTATATGTCTACTCTCGCTAACCAT 59.059 38.462 0.00 0.00 0.00 3.55
810 839 6.902771 ATATGTCTACTCTCGCTAACCATT 57.097 37.500 0.00 0.00 0.00 3.16
811 840 7.997773 ATATGTCTACTCTCGCTAACCATTA 57.002 36.000 0.00 0.00 0.00 1.90
812 841 5.752892 TGTCTACTCTCGCTAACCATTAG 57.247 43.478 0.00 0.00 36.32 1.73
813 842 4.579340 TGTCTACTCTCGCTAACCATTAGG 59.421 45.833 0.00 0.00 42.21 2.69
814 843 4.820716 GTCTACTCTCGCTAACCATTAGGA 59.179 45.833 0.00 0.00 38.69 2.94
820 849 2.500098 TCGCTAACCATTAGGAAGTGCT 59.500 45.455 0.00 0.00 38.69 4.40
856 885 4.184629 GGGGTGCGAAGATATATGTCATC 58.815 47.826 2.04 0.00 0.00 2.92
858 887 5.482908 GGGTGCGAAGATATATGTCATCTT 58.517 41.667 2.04 0.82 43.71 2.40
936 965 3.314083 TGCCGATGCAACACTTGTA 57.686 47.368 0.00 0.00 46.66 2.41
1095 1124 1.270305 CGAGGAGAAGAAGTGCAACCA 60.270 52.381 0.00 0.00 37.80 3.67
1112 1141 2.119832 ACCTCACCGTACAGCCCT 59.880 61.111 0.00 0.00 0.00 5.19
1140 1169 3.056678 TCCATGCGCTGACATTGAATTTT 60.057 39.130 9.73 0.00 0.00 1.82
1183 1212 1.995484 CTGCTACACCACGTCTGAATG 59.005 52.381 0.00 0.00 0.00 2.67
1238 1267 5.437289 TTGAATGTTGACGCATCTTTCTT 57.563 34.783 12.83 0.00 0.00 2.52
1445 1474 5.418840 ACAATATTGTGGTGGTGAATTCTCC 59.581 40.000 20.19 17.85 40.49 3.71
1493 1522 1.364171 CGGCTCCGGTTCTAGATGG 59.636 63.158 0.00 0.00 35.56 3.51
1572 1601 6.102663 AGAATCTAATATGGTAGCGCATGTC 58.897 40.000 11.47 0.00 0.00 3.06
1628 1657 2.593956 GGTTGGAAGAGCCTCCCGT 61.594 63.158 0.00 0.00 37.63 5.28
1644 1673 4.698304 CCTCCCGTTTTTATTGCTAGTTCA 59.302 41.667 0.00 0.00 0.00 3.18
1732 1761 1.568504 ACCCATTAGGAAGCACTCGA 58.431 50.000 0.00 0.00 39.89 4.04
1735 1764 3.054361 ACCCATTAGGAAGCACTCGATTT 60.054 43.478 0.00 0.00 39.89 2.17
1744 1773 2.733820 GCACTCGATTTGCTGATCAG 57.266 50.000 18.84 18.84 37.00 2.90
2098 2198 9.154847 AGAAAGTTCACTGAATTTTGAAAAAGG 57.845 29.630 14.95 0.00 32.99 3.11
2101 2201 7.610865 AGTTCACTGAATTTTGAAAAAGGTCA 58.389 30.769 0.00 0.00 33.58 4.02
2106 2206 8.881743 CACTGAATTTTGAAAAAGGTCATCAAA 58.118 29.630 0.00 0.00 40.29 2.69
2142 2242 9.671279 AAGTTCATTGGATTTGAAAAAGAGTTT 57.329 25.926 0.00 0.00 35.03 2.66
2190 2311 8.806634 TCGAAAATGAAAAACAGTTCATCAAAG 58.193 29.630 5.36 0.00 45.42 2.77
2297 2533 7.532682 AAAAAGAGCGCATTAAAGAAAACAA 57.467 28.000 11.47 0.00 0.00 2.83
2298 2534 7.532682 AAAAGAGCGCATTAAAGAAAACAAA 57.467 28.000 11.47 0.00 0.00 2.83
2299 2535 7.532682 AAAGAGCGCATTAAAGAAAACAAAA 57.467 28.000 11.47 0.00 0.00 2.44
2300 2536 7.532682 AAGAGCGCATTAAAGAAAACAAAAA 57.467 28.000 11.47 0.00 0.00 1.94
2301 2537 7.165427 AGAGCGCATTAAAGAAAACAAAAAG 57.835 32.000 11.47 0.00 0.00 2.27
2302 2538 6.978080 AGAGCGCATTAAAGAAAACAAAAAGA 59.022 30.769 11.47 0.00 0.00 2.52
2303 2539 7.491048 AGAGCGCATTAAAGAAAACAAAAAGAA 59.509 29.630 11.47 0.00 0.00 2.52
2304 2540 7.621102 AGCGCATTAAAGAAAACAAAAAGAAG 58.379 30.769 11.47 0.00 0.00 2.85
2305 2541 7.491048 AGCGCATTAAAGAAAACAAAAAGAAGA 59.509 29.630 11.47 0.00 0.00 2.87
2306 2542 8.113675 GCGCATTAAAGAAAACAAAAAGAAGAA 58.886 29.630 0.30 0.00 0.00 2.52
2307 2543 9.965748 CGCATTAAAGAAAACAAAAAGAAGAAA 57.034 25.926 0.00 0.00 0.00 2.52
2316 2552 9.811655 GAAAACAAAAAGAAGAAACAGAAAAGG 57.188 29.630 0.00 0.00 0.00 3.11
2317 2553 9.554395 AAAACAAAAAGAAGAAACAGAAAAGGA 57.446 25.926 0.00 0.00 0.00 3.36
2318 2554 9.725019 AAACAAAAAGAAGAAACAGAAAAGGAT 57.275 25.926 0.00 0.00 0.00 3.24
2368 2604 8.628882 AAAAATCAAACCGAACTAAAGAACAG 57.371 30.769 0.00 0.00 0.00 3.16
2369 2605 5.941948 ATCAAACCGAACTAAAGAACAGG 57.058 39.130 0.00 0.00 0.00 4.00
2370 2606 4.131596 TCAAACCGAACTAAAGAACAGGG 58.868 43.478 0.00 0.00 0.00 4.45
2371 2607 4.131596 CAAACCGAACTAAAGAACAGGGA 58.868 43.478 0.00 0.00 0.00 4.20
2372 2608 4.426736 AACCGAACTAAAGAACAGGGAA 57.573 40.909 0.00 0.00 0.00 3.97
2373 2609 4.426736 ACCGAACTAAAGAACAGGGAAA 57.573 40.909 0.00 0.00 0.00 3.13
2374 2610 4.784177 ACCGAACTAAAGAACAGGGAAAA 58.216 39.130 0.00 0.00 0.00 2.29
2375 2611 5.195185 ACCGAACTAAAGAACAGGGAAAAA 58.805 37.500 0.00 0.00 0.00 1.94
2376 2612 5.298527 ACCGAACTAAAGAACAGGGAAAAAG 59.701 40.000 0.00 0.00 0.00 2.27
2377 2613 5.529800 CCGAACTAAAGAACAGGGAAAAAGA 59.470 40.000 0.00 0.00 0.00 2.52
2378 2614 6.293462 CCGAACTAAAGAACAGGGAAAAAGAG 60.293 42.308 0.00 0.00 0.00 2.85
2379 2615 6.482308 CGAACTAAAGAACAGGGAAAAAGAGA 59.518 38.462 0.00 0.00 0.00 3.10
2380 2616 7.012044 CGAACTAAAGAACAGGGAAAAAGAGAA 59.988 37.037 0.00 0.00 0.00 2.87
2381 2617 8.768501 AACTAAAGAACAGGGAAAAAGAGAAT 57.231 30.769 0.00 0.00 0.00 2.40
2382 2618 9.862149 AACTAAAGAACAGGGAAAAAGAGAATA 57.138 29.630 0.00 0.00 0.00 1.75
2383 2619 9.862149 ACTAAAGAACAGGGAAAAAGAGAATAA 57.138 29.630 0.00 0.00 0.00 1.40
2385 2621 7.526142 AAGAACAGGGAAAAAGAGAATAACC 57.474 36.000 0.00 0.00 0.00 2.85
2386 2622 6.610830 AGAACAGGGAAAAAGAGAATAACCA 58.389 36.000 0.00 0.00 0.00 3.67
2387 2623 6.490381 AGAACAGGGAAAAAGAGAATAACCAC 59.510 38.462 0.00 0.00 0.00 4.16
2388 2624 5.953571 ACAGGGAAAAAGAGAATAACCACT 58.046 37.500 0.00 0.00 0.00 4.00
2389 2625 6.004574 ACAGGGAAAAAGAGAATAACCACTC 58.995 40.000 0.00 0.00 0.00 3.51
2390 2626 6.003950 CAGGGAAAAAGAGAATAACCACTCA 58.996 40.000 0.00 0.00 35.83 3.41
2391 2627 6.490040 CAGGGAAAAAGAGAATAACCACTCAA 59.510 38.462 0.00 0.00 35.83 3.02
2392 2628 6.490381 AGGGAAAAAGAGAATAACCACTCAAC 59.510 38.462 0.00 0.00 35.83 3.18
2393 2629 6.490381 GGGAAAAAGAGAATAACCACTCAACT 59.510 38.462 0.00 0.00 35.83 3.16
2394 2630 7.014326 GGGAAAAAGAGAATAACCACTCAACTT 59.986 37.037 0.00 0.00 35.83 2.66
2395 2631 7.862873 GGAAAAAGAGAATAACCACTCAACTTG 59.137 37.037 0.00 0.00 35.83 3.16
2396 2632 5.948992 AAGAGAATAACCACTCAACTTGC 57.051 39.130 0.00 0.00 35.83 4.01
2397 2633 4.327680 AGAGAATAACCACTCAACTTGCC 58.672 43.478 0.00 0.00 35.83 4.52
2398 2634 4.072131 GAGAATAACCACTCAACTTGCCA 58.928 43.478 0.00 0.00 33.86 4.92
2399 2635 4.469657 AGAATAACCACTCAACTTGCCAA 58.530 39.130 0.00 0.00 0.00 4.52
2400 2636 4.520492 AGAATAACCACTCAACTTGCCAAG 59.480 41.667 2.11 2.11 0.00 3.61
2401 2637 2.143876 AACCACTCAACTTGCCAAGT 57.856 45.000 3.74 3.74 45.46 3.16
2402 2638 1.392589 ACCACTCAACTTGCCAAGTG 58.607 50.000 11.51 5.83 41.91 3.16
2403 2639 1.340991 ACCACTCAACTTGCCAAGTGT 60.341 47.619 11.51 1.83 41.91 3.55
2404 2640 2.092646 ACCACTCAACTTGCCAAGTGTA 60.093 45.455 11.51 1.40 41.91 2.90
2405 2641 2.549754 CCACTCAACTTGCCAAGTGTAG 59.450 50.000 11.51 13.43 41.91 2.74
2406 2642 2.031682 CACTCAACTTGCCAAGTGTAGC 60.032 50.000 11.51 0.00 41.91 3.58
2407 2643 1.537202 CTCAACTTGCCAAGTGTAGCC 59.463 52.381 11.51 0.00 41.91 3.93
2408 2644 1.142870 TCAACTTGCCAAGTGTAGCCT 59.857 47.619 11.51 0.00 41.91 4.58
2409 2645 2.370519 TCAACTTGCCAAGTGTAGCCTA 59.629 45.455 11.51 0.00 41.91 3.93
2410 2646 2.744202 CAACTTGCCAAGTGTAGCCTAG 59.256 50.000 11.51 0.00 41.91 3.02
2411 2647 1.978580 ACTTGCCAAGTGTAGCCTAGT 59.021 47.619 9.77 0.00 41.01 2.57
2412 2648 2.289694 ACTTGCCAAGTGTAGCCTAGTG 60.290 50.000 9.77 0.00 41.01 2.74
2413 2649 0.613260 TGCCAAGTGTAGCCTAGTGG 59.387 55.000 0.00 0.00 0.00 4.00
2414 2650 0.613777 GCCAAGTGTAGCCTAGTGGT 59.386 55.000 0.00 0.00 35.27 4.16
2415 2651 1.003233 GCCAAGTGTAGCCTAGTGGTT 59.997 52.381 0.00 0.00 35.27 3.67
2416 2652 2.699954 CCAAGTGTAGCCTAGTGGTTG 58.300 52.381 0.00 0.00 35.27 3.77
2417 2653 2.615493 CCAAGTGTAGCCTAGTGGTTGG 60.615 54.545 0.00 0.00 35.27 3.77
2418 2654 2.301870 CAAGTGTAGCCTAGTGGTTGGA 59.698 50.000 0.00 0.00 35.27 3.53
2419 2655 2.616524 AGTGTAGCCTAGTGGTTGGAA 58.383 47.619 0.00 0.00 35.27 3.53
2420 2656 2.302157 AGTGTAGCCTAGTGGTTGGAAC 59.698 50.000 0.00 0.00 35.27 3.62
2421 2657 1.274167 TGTAGCCTAGTGGTTGGAACG 59.726 52.381 0.00 0.00 35.27 3.95
2422 2658 1.547372 GTAGCCTAGTGGTTGGAACGA 59.453 52.381 0.00 0.00 35.27 3.85
2423 2659 1.053424 AGCCTAGTGGTTGGAACGAA 58.947 50.000 0.00 0.00 35.27 3.85
2424 2660 1.002087 AGCCTAGTGGTTGGAACGAAG 59.998 52.381 0.00 0.00 35.27 3.79
2425 2661 1.439679 CCTAGTGGTTGGAACGAAGC 58.560 55.000 0.00 0.00 0.00 3.86
2426 2662 1.270625 CCTAGTGGTTGGAACGAAGCA 60.271 52.381 0.00 0.00 0.00 3.91
2428 2664 2.702847 GTGGTTGGAACGAAGCACT 58.297 52.632 18.97 0.00 46.27 4.40
2429 2665 0.586802 GTGGTTGGAACGAAGCACTC 59.413 55.000 18.97 0.90 46.27 3.51
2430 2666 0.179234 TGGTTGGAACGAAGCACTCA 59.821 50.000 0.00 0.00 0.00 3.41
2431 2667 0.586802 GGTTGGAACGAAGCACTCAC 59.413 55.000 0.00 0.00 0.00 3.51
2432 2668 1.583054 GTTGGAACGAAGCACTCACT 58.417 50.000 0.00 0.00 0.00 3.41
2433 2669 2.547218 GGTTGGAACGAAGCACTCACTA 60.547 50.000 0.00 0.00 0.00 2.74
2434 2670 2.724977 TGGAACGAAGCACTCACTAG 57.275 50.000 0.00 0.00 0.00 2.57
2435 2671 1.272490 TGGAACGAAGCACTCACTAGG 59.728 52.381 0.00 0.00 0.00 3.02
2436 2672 1.544691 GGAACGAAGCACTCACTAGGA 59.455 52.381 0.00 0.00 0.00 2.94
2437 2673 2.597520 GAACGAAGCACTCACTAGGAC 58.402 52.381 0.00 0.00 0.00 3.85
2438 2674 0.522180 ACGAAGCACTCACTAGGACG 59.478 55.000 0.00 0.00 0.00 4.79
2439 2675 0.522180 CGAAGCACTCACTAGGACGT 59.478 55.000 0.00 0.00 0.00 4.34
2440 2676 1.729472 CGAAGCACTCACTAGGACGTG 60.729 57.143 0.00 0.00 36.25 4.49
2441 2677 0.603569 AAGCACTCACTAGGACGTGG 59.396 55.000 0.00 0.00 35.63 4.94
2442 2678 1.215647 GCACTCACTAGGACGTGGG 59.784 63.158 0.00 0.00 41.19 4.61
2443 2679 1.215647 CACTCACTAGGACGTGGGC 59.784 63.158 0.00 0.00 38.99 5.36
2444 2680 2.341101 ACTCACTAGGACGTGGGCG 61.341 63.158 0.00 0.00 38.99 6.13
2454 2690 4.973055 CGTGGGCGTGGGTTCGAA 62.973 66.667 0.00 0.00 0.00 3.71
2455 2691 2.592287 GTGGGCGTGGGTTCGAAA 60.592 61.111 0.00 0.00 0.00 3.46
2456 2692 2.592287 TGGGCGTGGGTTCGAAAC 60.592 61.111 4.08 4.08 0.00 2.78
2465 2701 2.180674 GGTTCGAAACCCTGATGCC 58.819 57.895 0.32 0.00 46.12 4.40
2466 2702 1.313091 GGTTCGAAACCCTGATGCCC 61.313 60.000 0.32 0.00 46.12 5.36
2467 2703 1.001393 TTCGAAACCCTGATGCCCC 60.001 57.895 0.00 0.00 0.00 5.80
2468 2704 1.784301 TTCGAAACCCTGATGCCCCA 61.784 55.000 0.00 0.00 0.00 4.96
2469 2705 1.076777 CGAAACCCTGATGCCCCAT 60.077 57.895 0.00 0.00 0.00 4.00
2470 2706 1.103398 CGAAACCCTGATGCCCCATC 61.103 60.000 0.00 0.00 40.88 3.51
2471 2707 0.259938 GAAACCCTGATGCCCCATCT 59.740 55.000 6.74 0.00 41.06 2.90
2472 2708 0.712380 AAACCCTGATGCCCCATCTT 59.288 50.000 6.74 0.00 41.06 2.40
2473 2709 0.712380 AACCCTGATGCCCCATCTTT 59.288 50.000 6.74 0.00 41.06 2.52
2474 2710 0.712380 ACCCTGATGCCCCATCTTTT 59.288 50.000 6.74 0.00 41.06 2.27
2475 2711 1.079323 ACCCTGATGCCCCATCTTTTT 59.921 47.619 6.74 0.00 41.06 1.94
2497 2733 6.910536 TTTGCGTTTCAAAAACAACCATAT 57.089 29.167 3.72 0.00 41.36 1.78
2498 2734 5.896922 TGCGTTTCAAAAACAACCATATG 57.103 34.783 0.00 0.00 0.00 1.78
2499 2735 4.747108 TGCGTTTCAAAAACAACCATATGG 59.253 37.500 20.68 20.68 42.17 2.74
2500 2736 4.151512 GCGTTTCAAAAACAACCATATGGG 59.848 41.667 25.55 11.32 44.81 4.00
2501 2737 4.151512 CGTTTCAAAAACAACCATATGGGC 59.848 41.667 25.55 0.00 42.05 5.36
2502 2738 3.584406 TCAAAAACAACCATATGGGCG 57.416 42.857 25.55 17.41 42.05 6.13
2503 2739 1.999024 CAAAAACAACCATATGGGCGC 59.001 47.619 25.55 0.00 42.05 6.53
2504 2740 1.261480 AAAACAACCATATGGGCGCA 58.739 45.000 25.55 5.70 42.05 6.09
2505 2741 1.484038 AAACAACCATATGGGCGCAT 58.516 45.000 25.55 20.92 42.05 4.73
2506 2742 0.746063 AACAACCATATGGGCGCATG 59.254 50.000 25.55 16.70 42.05 4.06
2507 2743 1.007038 CAACCATATGGGCGCATGC 60.007 57.895 25.55 7.91 42.05 4.06
2508 2744 1.455402 AACCATATGGGCGCATGCA 60.455 52.632 25.55 7.61 45.35 3.96
2509 2745 1.457823 AACCATATGGGCGCATGCAG 61.458 55.000 25.55 15.11 45.35 4.41
2510 2746 2.257371 CATATGGGCGCATGCAGC 59.743 61.111 25.20 20.53 45.35 5.25
2519 2755 4.314096 GCATGCAGCGCCAAATAG 57.686 55.556 14.21 0.00 0.00 1.73
2520 2756 1.299620 GCATGCAGCGCCAAATAGG 60.300 57.895 14.21 0.00 41.84 2.57
2521 2757 1.727511 GCATGCAGCGCCAAATAGGA 61.728 55.000 14.21 0.00 41.22 2.94
2522 2758 0.956633 CATGCAGCGCCAAATAGGAT 59.043 50.000 2.29 0.00 41.22 3.24
2523 2759 1.338973 CATGCAGCGCCAAATAGGATT 59.661 47.619 2.29 0.00 41.22 3.01
2524 2760 1.024271 TGCAGCGCCAAATAGGATTC 58.976 50.000 2.29 0.00 41.22 2.52
2525 2761 0.040958 GCAGCGCCAAATAGGATTCG 60.041 55.000 2.29 0.00 41.22 3.34
2526 2762 0.040958 CAGCGCCAAATAGGATTCGC 60.041 55.000 2.29 0.00 43.85 4.70
2527 2763 1.166531 AGCGCCAAATAGGATTCGCC 61.167 55.000 2.29 0.00 44.36 5.54
2528 2764 1.444119 GCGCCAAATAGGATTCGCCA 61.444 55.000 0.00 0.00 39.54 5.69
2529 2765 0.307760 CGCCAAATAGGATTCGCCAC 59.692 55.000 0.00 0.00 41.22 5.01
2530 2766 0.668535 GCCAAATAGGATTCGCCACC 59.331 55.000 0.00 0.00 41.22 4.61
2531 2767 1.750682 GCCAAATAGGATTCGCCACCT 60.751 52.381 0.00 0.00 41.22 4.00
2532 2768 1.949525 CCAAATAGGATTCGCCACCTG 59.050 52.381 0.00 0.00 41.22 4.00
2533 2769 2.421388 CCAAATAGGATTCGCCACCTGA 60.421 50.000 0.00 0.00 41.22 3.86
2534 2770 2.614057 CAAATAGGATTCGCCACCTGAC 59.386 50.000 0.00 0.00 40.02 3.51
2535 2771 1.794714 ATAGGATTCGCCACCTGACT 58.205 50.000 0.00 0.00 40.02 3.41
2536 2772 1.112113 TAGGATTCGCCACCTGACTC 58.888 55.000 0.00 0.00 40.02 3.36
2537 2773 1.519455 GGATTCGCCACCTGACTCG 60.519 63.158 0.00 0.00 36.34 4.18
2538 2774 1.519455 GATTCGCCACCTGACTCGG 60.519 63.158 0.00 0.00 0.00 4.63
2539 2775 3.665675 ATTCGCCACCTGACTCGGC 62.666 63.158 0.00 0.00 42.64 5.54
2542 2778 4.314440 GCCACCTGACTCGGCACA 62.314 66.667 0.00 0.00 45.52 4.57
2543 2779 2.357517 CCACCTGACTCGGCACAC 60.358 66.667 0.00 0.00 0.00 3.82
2544 2780 2.734723 CACCTGACTCGGCACACG 60.735 66.667 0.00 0.00 46.11 4.49
2545 2781 4.664677 ACCTGACTCGGCACACGC 62.665 66.667 0.00 0.00 43.86 5.34
2546 2782 4.662961 CCTGACTCGGCACACGCA 62.663 66.667 0.00 0.00 43.86 5.24
2547 2783 3.406361 CTGACTCGGCACACGCAC 61.406 66.667 0.00 0.00 43.86 5.34
2548 2784 4.214327 TGACTCGGCACACGCACA 62.214 61.111 0.00 0.00 43.86 4.57
2549 2785 3.702555 GACTCGGCACACGCACAC 61.703 66.667 0.00 0.00 43.86 3.82
2555 2791 3.118454 GCACACGCACACGGCTAT 61.118 61.111 0.00 0.00 46.04 2.97
2556 2792 1.807981 GCACACGCACACGGCTATA 60.808 57.895 0.00 0.00 46.04 1.31
2557 2793 1.355796 GCACACGCACACGGCTATAA 61.356 55.000 0.00 0.00 46.04 0.98
2558 2794 0.645355 CACACGCACACGGCTATAAG 59.355 55.000 0.00 0.00 46.04 1.73
2559 2795 0.245539 ACACGCACACGGCTATAAGT 59.754 50.000 0.00 0.00 46.04 2.24
2560 2796 1.473677 ACACGCACACGGCTATAAGTA 59.526 47.619 0.00 0.00 46.04 2.24
2561 2797 1.850441 CACGCACACGGCTATAAGTAC 59.150 52.381 0.00 0.00 46.04 2.73
2562 2798 1.747355 ACGCACACGGCTATAAGTACT 59.253 47.619 0.00 0.00 46.04 2.73
2563 2799 2.165030 ACGCACACGGCTATAAGTACTT 59.835 45.455 13.68 13.68 46.04 2.24
2564 2800 2.534349 CGCACACGGCTATAAGTACTTG 59.466 50.000 18.56 2.68 41.67 3.16
2565 2801 2.284417 GCACACGGCTATAAGTACTTGC 59.716 50.000 18.56 12.63 40.25 4.01
2566 2802 3.782046 CACACGGCTATAAGTACTTGCT 58.218 45.455 18.56 7.94 0.00 3.91
2567 2803 4.735578 GCACACGGCTATAAGTACTTGCTA 60.736 45.833 18.56 8.65 40.25 3.49
2568 2804 5.529791 CACACGGCTATAAGTACTTGCTAT 58.470 41.667 18.56 6.49 0.00 2.97
2569 2805 5.983720 CACACGGCTATAAGTACTTGCTATT 59.016 40.000 18.56 0.91 0.00 1.73
2570 2806 7.143340 CACACGGCTATAAGTACTTGCTATTA 58.857 38.462 18.56 0.00 0.00 0.98
2571 2807 7.114529 CACACGGCTATAAGTACTTGCTATTAC 59.885 40.741 18.56 2.06 0.00 1.89
2572 2808 7.143340 CACGGCTATAAGTACTTGCTATTACA 58.857 38.462 18.56 0.00 0.00 2.41
2573 2809 7.650504 CACGGCTATAAGTACTTGCTATTACAA 59.349 37.037 18.56 0.00 0.00 2.41
2582 2818 2.418368 TGCTATTACAAGCCACCTGG 57.582 50.000 0.00 0.00 42.05 4.45
2583 2819 1.064758 TGCTATTACAAGCCACCTGGG 60.065 52.381 0.00 0.00 42.05 4.45
2592 2828 4.722700 CCACCTGGGCCAAGACGG 62.723 72.222 9.44 8.70 38.11 4.79
2601 2837 4.308458 CCAAGACGGCCCGACACA 62.308 66.667 11.71 0.00 0.00 3.72
2602 2838 3.041940 CAAGACGGCCCGACACAC 61.042 66.667 11.71 0.00 0.00 3.82
2603 2839 3.542676 AAGACGGCCCGACACACA 61.543 61.111 11.71 0.00 0.00 3.72
2604 2840 2.879233 AAGACGGCCCGACACACAT 61.879 57.895 11.71 0.00 0.00 3.21
2605 2841 2.358247 GACGGCCCGACACACATT 60.358 61.111 11.71 0.00 0.00 2.71
2606 2842 2.358247 ACGGCCCGACACACATTC 60.358 61.111 11.71 0.00 0.00 2.67
2607 2843 2.358125 CGGCCCGACACACATTCA 60.358 61.111 0.00 0.00 0.00 2.57
2608 2844 2.677003 CGGCCCGACACACATTCAC 61.677 63.158 0.00 0.00 0.00 3.18
2609 2845 2.332654 GGCCCGACACACATTCACC 61.333 63.158 0.00 0.00 0.00 4.02
2610 2846 2.332654 GCCCGACACACATTCACCC 61.333 63.158 0.00 0.00 0.00 4.61
2611 2847 1.072332 CCCGACACACATTCACCCA 59.928 57.895 0.00 0.00 0.00 4.51
2612 2848 1.234615 CCCGACACACATTCACCCAC 61.235 60.000 0.00 0.00 0.00 4.61
2613 2849 0.250295 CCGACACACATTCACCCACT 60.250 55.000 0.00 0.00 0.00 4.00
2614 2850 1.148310 CGACACACATTCACCCACTC 58.852 55.000 0.00 0.00 0.00 3.51
2615 2851 1.540146 CGACACACATTCACCCACTCA 60.540 52.381 0.00 0.00 0.00 3.41
2616 2852 2.783135 GACACACATTCACCCACTCAT 58.217 47.619 0.00 0.00 0.00 2.90
2617 2853 2.485426 GACACACATTCACCCACTCATG 59.515 50.000 0.00 0.00 0.00 3.07
2618 2854 1.814394 CACACATTCACCCACTCATGG 59.186 52.381 0.00 0.00 46.81 3.66
2626 2862 4.489771 CCACTCATGGGCCGGGTC 62.490 72.222 2.18 0.00 43.04 4.46
2627 2863 4.489771 CACTCATGGGCCGGGTCC 62.490 72.222 11.77 11.77 0.00 4.46
2629 2865 4.181010 CTCATGGGCCGGGTCCAG 62.181 72.222 26.61 17.27 42.12 3.86
2635 2871 4.280019 GGCCGGGTCCAGGTTGTT 62.280 66.667 10.03 0.00 0.00 2.83
2636 2872 2.203437 GCCGGGTCCAGGTTGTTT 60.203 61.111 10.03 0.00 0.00 2.83
2637 2873 2.265904 GCCGGGTCCAGGTTGTTTC 61.266 63.158 10.03 0.00 0.00 2.78
2638 2874 1.149627 CCGGGTCCAGGTTGTTTCA 59.850 57.895 0.00 0.00 0.00 2.69
2639 2875 0.251165 CCGGGTCCAGGTTGTTTCAT 60.251 55.000 0.00 0.00 0.00 2.57
2640 2876 1.003812 CCGGGTCCAGGTTGTTTCATA 59.996 52.381 0.00 0.00 0.00 2.15
2641 2877 2.081462 CGGGTCCAGGTTGTTTCATAC 58.919 52.381 0.00 0.00 0.00 2.39
2642 2878 2.443416 GGGTCCAGGTTGTTTCATACC 58.557 52.381 0.00 0.00 34.54 2.73
2643 2879 2.443416 GGTCCAGGTTGTTTCATACCC 58.557 52.381 0.00 0.00 34.90 3.69
2644 2880 2.443416 GTCCAGGTTGTTTCATACCCC 58.557 52.381 0.00 0.00 34.90 4.95
2645 2881 2.041216 GTCCAGGTTGTTTCATACCCCT 59.959 50.000 0.00 0.00 34.90 4.79
2646 2882 2.307686 TCCAGGTTGTTTCATACCCCTC 59.692 50.000 0.00 0.00 34.90 4.30
2647 2883 2.620627 CCAGGTTGTTTCATACCCCTCC 60.621 54.545 0.00 0.00 34.90 4.30
2648 2884 2.308866 CAGGTTGTTTCATACCCCTCCT 59.691 50.000 0.00 0.00 34.90 3.69
2649 2885 2.576648 AGGTTGTTTCATACCCCTCCTC 59.423 50.000 0.00 0.00 34.90 3.71
2650 2886 2.576648 GGTTGTTTCATACCCCTCCTCT 59.423 50.000 0.00 0.00 0.00 3.69
2651 2887 3.010250 GGTTGTTTCATACCCCTCCTCTT 59.990 47.826 0.00 0.00 0.00 2.85
2652 2888 4.226620 GGTTGTTTCATACCCCTCCTCTTA 59.773 45.833 0.00 0.00 0.00 2.10
2653 2889 5.429130 GTTGTTTCATACCCCTCCTCTTAG 58.571 45.833 0.00 0.00 0.00 2.18
2654 2890 4.037927 TGTTTCATACCCCTCCTCTTAGG 58.962 47.826 0.00 0.00 36.46 2.69
2663 2899 1.204941 CCTCCTCTTAGGGTGTGTTCG 59.795 57.143 0.00 0.00 35.59 3.95
2664 2900 1.204941 CTCCTCTTAGGGTGTGTTCGG 59.795 57.143 0.00 0.00 35.59 4.30
2665 2901 0.974383 CCTCTTAGGGTGTGTTCGGT 59.026 55.000 0.00 0.00 0.00 4.69
2666 2902 1.346722 CCTCTTAGGGTGTGTTCGGTT 59.653 52.381 0.00 0.00 0.00 4.44
2667 2903 2.413837 CTCTTAGGGTGTGTTCGGTTG 58.586 52.381 0.00 0.00 0.00 3.77
2668 2904 0.872388 CTTAGGGTGTGTTCGGTTGC 59.128 55.000 0.00 0.00 0.00 4.17
2669 2905 0.470766 TTAGGGTGTGTTCGGTTGCT 59.529 50.000 0.00 0.00 0.00 3.91
2670 2906 0.250124 TAGGGTGTGTTCGGTTGCTG 60.250 55.000 0.00 0.00 0.00 4.41
2671 2907 1.822186 GGGTGTGTTCGGTTGCTGT 60.822 57.895 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 7.946043 GAAATTGTTCAGCATGTCTAAACATG 58.054 34.615 12.95 12.95 46.66 3.21
6 7 6.803320 CGAAATTGTTCAGCATGTCTAAACAT 59.197 34.615 6.67 0.00 38.98 2.71
621 650 4.199310 GCTTGTTTGGTAGGATGCATAGA 58.801 43.478 0.00 0.00 0.00 1.98
623 652 3.961849 TGCTTGTTTGGTAGGATGCATA 58.038 40.909 0.00 0.00 0.00 3.14
629 658 4.202305 CCCATTTTTGCTTGTTTGGTAGGA 60.202 41.667 0.00 0.00 0.00 2.94
674 703 1.815421 CCTATGTGGTGAGGCGTGC 60.815 63.158 0.00 0.00 0.00 5.34
680 709 2.203070 GCCGGCCTATGTGGTGAG 60.203 66.667 18.11 0.00 38.35 3.51
684 713 4.569180 CTGGGCCGGCCTATGTGG 62.569 72.222 42.70 22.98 39.35 4.17
687 716 4.504596 TTGCTGGGCCGGCCTATG 62.505 66.667 42.70 31.15 34.37 2.23
688 717 3.738481 TTTGCTGGGCCGGCCTAT 61.738 61.111 42.70 0.00 34.37 2.57
689 718 4.733542 GTTTGCTGGGCCGGCCTA 62.734 66.667 42.70 37.30 34.37 3.93
693 722 3.989787 GTTGGTTTGCTGGGCCGG 61.990 66.667 8.39 8.39 0.00 6.13
694 723 3.211564 CTGTTGGTTTGCTGGGCCG 62.212 63.158 0.00 0.00 0.00 6.13
695 724 1.398958 TTCTGTTGGTTTGCTGGGCC 61.399 55.000 0.00 0.00 0.00 5.80
696 725 0.463620 TTTCTGTTGGTTTGCTGGGC 59.536 50.000 0.00 0.00 0.00 5.36
697 726 2.977772 TTTTCTGTTGGTTTGCTGGG 57.022 45.000 0.00 0.00 0.00 4.45
698 727 4.122143 TCTTTTTCTGTTGGTTTGCTGG 57.878 40.909 0.00 0.00 0.00 4.85
699 728 6.479095 TTTTCTTTTTCTGTTGGTTTGCTG 57.521 33.333 0.00 0.00 0.00 4.41
700 729 6.710295 AGTTTTTCTTTTTCTGTTGGTTTGCT 59.290 30.769 0.00 0.00 0.00 3.91
701 730 6.796552 CAGTTTTTCTTTTTCTGTTGGTTTGC 59.203 34.615 0.00 0.00 0.00 3.68
702 731 6.796552 GCAGTTTTTCTTTTTCTGTTGGTTTG 59.203 34.615 0.00 0.00 0.00 2.93
703 732 6.347321 CGCAGTTTTTCTTTTTCTGTTGGTTT 60.347 34.615 0.00 0.00 0.00 3.27
704 733 5.120053 CGCAGTTTTTCTTTTTCTGTTGGTT 59.880 36.000 0.00 0.00 0.00 3.67
705 734 4.625311 CGCAGTTTTTCTTTTTCTGTTGGT 59.375 37.500 0.00 0.00 0.00 3.67
706 735 4.862018 TCGCAGTTTTTCTTTTTCTGTTGG 59.138 37.500 0.00 0.00 0.00 3.77
707 736 5.799936 TCTCGCAGTTTTTCTTTTTCTGTTG 59.200 36.000 0.00 0.00 0.00 3.33
708 737 5.949735 TCTCGCAGTTTTTCTTTTTCTGTT 58.050 33.333 0.00 0.00 0.00 3.16
709 738 5.560966 TCTCGCAGTTTTTCTTTTTCTGT 57.439 34.783 0.00 0.00 0.00 3.41
710 739 8.560576 TTTATCTCGCAGTTTTTCTTTTTCTG 57.439 30.769 0.00 0.00 0.00 3.02
711 740 9.020813 GTTTTATCTCGCAGTTTTTCTTTTTCT 57.979 29.630 0.00 0.00 0.00 2.52
712 741 7.991046 CGTTTTATCTCGCAGTTTTTCTTTTTC 59.009 33.333 0.00 0.00 0.00 2.29
713 742 7.486870 ACGTTTTATCTCGCAGTTTTTCTTTTT 59.513 29.630 0.00 0.00 0.00 1.94
714 743 6.970613 ACGTTTTATCTCGCAGTTTTTCTTTT 59.029 30.769 0.00 0.00 0.00 2.27
715 744 6.492254 ACGTTTTATCTCGCAGTTTTTCTTT 58.508 32.000 0.00 0.00 0.00 2.52
716 745 6.056428 ACGTTTTATCTCGCAGTTTTTCTT 57.944 33.333 0.00 0.00 0.00 2.52
717 746 5.668558 ACGTTTTATCTCGCAGTTTTTCT 57.331 34.783 0.00 0.00 0.00 2.52
718 747 5.905181 TGAACGTTTTATCTCGCAGTTTTTC 59.095 36.000 0.46 0.00 0.00 2.29
719 748 5.812652 TGAACGTTTTATCTCGCAGTTTTT 58.187 33.333 0.46 0.00 0.00 1.94
720 749 5.412526 TGAACGTTTTATCTCGCAGTTTT 57.587 34.783 0.46 0.00 0.00 2.43
721 750 5.049680 ACATGAACGTTTTATCTCGCAGTTT 60.050 36.000 0.46 0.00 0.00 2.66
722 751 4.451096 ACATGAACGTTTTATCTCGCAGTT 59.549 37.500 0.46 0.00 0.00 3.16
723 752 3.994392 ACATGAACGTTTTATCTCGCAGT 59.006 39.130 0.46 0.00 0.00 4.40
724 753 4.584029 ACATGAACGTTTTATCTCGCAG 57.416 40.909 0.46 0.00 0.00 5.18
725 754 5.351233 AAACATGAACGTTTTATCTCGCA 57.649 34.783 0.46 0.00 35.58 5.10
726 755 6.531439 AGTAAACATGAACGTTTTATCTCGC 58.469 36.000 0.46 0.00 39.70 5.03
727 756 6.887763 CGAGTAAACATGAACGTTTTATCTCG 59.112 38.462 0.46 12.72 41.16 4.04
728 757 7.171434 CCGAGTAAACATGAACGTTTTATCTC 58.829 38.462 0.46 5.91 39.70 2.75
729 758 6.091713 CCCGAGTAAACATGAACGTTTTATCT 59.908 38.462 0.46 0.00 39.70 1.98
730 759 6.091169 TCCCGAGTAAACATGAACGTTTTATC 59.909 38.462 0.46 0.00 39.70 1.75
731 760 5.933463 TCCCGAGTAAACATGAACGTTTTAT 59.067 36.000 0.46 0.00 39.70 1.40
732 761 5.295950 TCCCGAGTAAACATGAACGTTTTA 58.704 37.500 0.46 0.00 39.70 1.52
733 762 4.128643 TCCCGAGTAAACATGAACGTTTT 58.871 39.130 0.46 0.00 39.70 2.43
734 763 3.731089 TCCCGAGTAAACATGAACGTTT 58.269 40.909 0.46 0.00 41.78 3.60
735 764 3.006110 TCTCCCGAGTAAACATGAACGTT 59.994 43.478 0.00 0.00 0.00 3.99
736 765 2.559668 TCTCCCGAGTAAACATGAACGT 59.440 45.455 0.00 0.00 0.00 3.99
737 766 3.226346 TCTCCCGAGTAAACATGAACG 57.774 47.619 0.00 0.00 0.00 3.95
738 767 3.683340 GGTTCTCCCGAGTAAACATGAAC 59.317 47.826 0.00 0.00 33.87 3.18
739 768 3.934068 GGTTCTCCCGAGTAAACATGAA 58.066 45.455 0.00 0.00 0.00 2.57
740 769 3.604875 GGTTCTCCCGAGTAAACATGA 57.395 47.619 0.00 0.00 0.00 3.07
752 781 0.033642 GATCGAATCCCGGTTCTCCC 59.966 60.000 0.00 0.00 39.14 4.30
753 782 1.000052 GAGATCGAATCCCGGTTCTCC 60.000 57.143 0.00 0.00 39.65 3.71
754 783 1.957877 AGAGATCGAATCCCGGTTCTC 59.042 52.381 0.00 0.00 42.68 2.87
755 784 1.683917 CAGAGATCGAATCCCGGTTCT 59.316 52.381 0.00 0.00 39.14 3.01
756 785 1.681793 TCAGAGATCGAATCCCGGTTC 59.318 52.381 0.00 0.00 39.14 3.62
757 786 1.776662 TCAGAGATCGAATCCCGGTT 58.223 50.000 0.00 0.00 39.14 4.44
758 787 1.409427 GTTCAGAGATCGAATCCCGGT 59.591 52.381 0.00 0.00 39.14 5.28
759 788 1.600663 CGTTCAGAGATCGAATCCCGG 60.601 57.143 0.00 0.00 39.14 5.73
760 789 1.600663 CCGTTCAGAGATCGAATCCCG 60.601 57.143 0.00 0.00 40.25 5.14
761 790 1.870167 GCCGTTCAGAGATCGAATCCC 60.870 57.143 0.00 0.00 0.00 3.85
762 791 1.202417 TGCCGTTCAGAGATCGAATCC 60.202 52.381 0.00 0.00 0.00 3.01
763 792 2.209838 TGCCGTTCAGAGATCGAATC 57.790 50.000 0.00 0.00 0.00 2.52
764 793 2.672961 TTGCCGTTCAGAGATCGAAT 57.327 45.000 0.00 0.00 0.00 3.34
765 794 2.270923 CATTGCCGTTCAGAGATCGAA 58.729 47.619 0.00 0.00 0.00 3.71
766 795 1.204704 ACATTGCCGTTCAGAGATCGA 59.795 47.619 0.00 0.00 0.00 3.59
767 796 1.645034 ACATTGCCGTTCAGAGATCG 58.355 50.000 0.00 0.00 0.00 3.69
768 797 5.928839 ACATATACATTGCCGTTCAGAGATC 59.071 40.000 0.00 0.00 0.00 2.75
769 798 5.858381 ACATATACATTGCCGTTCAGAGAT 58.142 37.500 0.00 0.00 0.00 2.75
770 799 5.069119 AGACATATACATTGCCGTTCAGAGA 59.931 40.000 0.00 0.00 0.00 3.10
771 800 5.292765 AGACATATACATTGCCGTTCAGAG 58.707 41.667 0.00 0.00 0.00 3.35
772 801 5.276461 AGACATATACATTGCCGTTCAGA 57.724 39.130 0.00 0.00 0.00 3.27
773 802 6.216569 AGTAGACATATACATTGCCGTTCAG 58.783 40.000 0.00 0.00 0.00 3.02
774 803 6.040504 AGAGTAGACATATACATTGCCGTTCA 59.959 38.462 0.00 0.00 0.00 3.18
775 804 6.448006 AGAGTAGACATATACATTGCCGTTC 58.552 40.000 0.00 0.00 0.00 3.95
776 805 6.406692 AGAGTAGACATATACATTGCCGTT 57.593 37.500 0.00 0.00 0.00 4.44
777 806 5.334957 CGAGAGTAGACATATACATTGCCGT 60.335 44.000 0.00 0.00 0.00 5.68
778 807 5.089411 CGAGAGTAGACATATACATTGCCG 58.911 45.833 0.00 0.00 0.00 5.69
779 808 4.859798 GCGAGAGTAGACATATACATTGCC 59.140 45.833 0.00 0.00 0.00 4.52
780 809 5.704888 AGCGAGAGTAGACATATACATTGC 58.295 41.667 0.00 0.00 0.00 3.56
781 810 7.751348 GGTTAGCGAGAGTAGACATATACATTG 59.249 40.741 0.00 0.00 0.00 2.82
782 811 7.447545 TGGTTAGCGAGAGTAGACATATACATT 59.552 37.037 0.00 0.00 0.00 2.71
783 812 6.940867 TGGTTAGCGAGAGTAGACATATACAT 59.059 38.462 0.00 0.00 0.00 2.29
784 813 6.293698 TGGTTAGCGAGAGTAGACATATACA 58.706 40.000 0.00 0.00 0.00 2.29
785 814 6.798315 TGGTTAGCGAGAGTAGACATATAC 57.202 41.667 0.00 0.00 0.00 1.47
786 815 7.997773 AATGGTTAGCGAGAGTAGACATATA 57.002 36.000 0.00 0.00 0.00 0.86
787 816 6.902771 AATGGTTAGCGAGAGTAGACATAT 57.097 37.500 0.00 0.00 0.00 1.78
788 817 6.430308 CCTAATGGTTAGCGAGAGTAGACATA 59.570 42.308 0.00 0.00 31.81 2.29
789 818 5.241949 CCTAATGGTTAGCGAGAGTAGACAT 59.758 44.000 0.00 0.00 31.81 3.06
790 819 4.579340 CCTAATGGTTAGCGAGAGTAGACA 59.421 45.833 0.00 0.00 31.81 3.41
791 820 4.820716 TCCTAATGGTTAGCGAGAGTAGAC 59.179 45.833 0.00 0.00 34.23 2.59
792 821 5.045012 TCCTAATGGTTAGCGAGAGTAGA 57.955 43.478 0.00 0.00 34.23 2.59
793 822 5.299782 ACTTCCTAATGGTTAGCGAGAGTAG 59.700 44.000 0.00 0.00 34.23 2.57
794 823 5.067413 CACTTCCTAATGGTTAGCGAGAGTA 59.933 44.000 0.00 0.00 34.23 2.59
795 824 4.024670 ACTTCCTAATGGTTAGCGAGAGT 58.975 43.478 0.00 0.00 34.23 3.24
796 825 4.363999 CACTTCCTAATGGTTAGCGAGAG 58.636 47.826 0.00 0.00 34.23 3.20
797 826 3.430374 GCACTTCCTAATGGTTAGCGAGA 60.430 47.826 0.00 0.00 34.23 4.04
798 827 2.866762 GCACTTCCTAATGGTTAGCGAG 59.133 50.000 0.00 0.00 34.23 5.03
799 828 2.500098 AGCACTTCCTAATGGTTAGCGA 59.500 45.455 0.00 0.00 34.23 4.93
800 829 2.866762 GAGCACTTCCTAATGGTTAGCG 59.133 50.000 0.00 0.00 34.23 4.26
801 830 3.873910 TGAGCACTTCCTAATGGTTAGC 58.126 45.455 0.00 0.00 34.23 3.09
802 831 5.091261 ACTGAGCACTTCCTAATGGTTAG 57.909 43.478 0.00 0.00 36.37 2.34
803 832 6.156256 ACATACTGAGCACTTCCTAATGGTTA 59.844 38.462 0.00 0.00 34.23 2.85
804 833 5.045578 ACATACTGAGCACTTCCTAATGGTT 60.046 40.000 0.00 0.00 34.23 3.67
805 834 4.471386 ACATACTGAGCACTTCCTAATGGT 59.529 41.667 0.00 0.00 34.23 3.55
806 835 5.028549 ACATACTGAGCACTTCCTAATGG 57.971 43.478 0.00 0.00 0.00 3.16
807 836 6.201806 GCTTACATACTGAGCACTTCCTAATG 59.798 42.308 0.00 0.00 36.45 1.90
808 837 6.098982 AGCTTACATACTGAGCACTTCCTAAT 59.901 38.462 0.00 0.00 38.85 1.73
809 838 5.422331 AGCTTACATACTGAGCACTTCCTAA 59.578 40.000 0.00 0.00 38.85 2.69
810 839 4.956700 AGCTTACATACTGAGCACTTCCTA 59.043 41.667 0.00 0.00 38.85 2.94
811 840 3.772025 AGCTTACATACTGAGCACTTCCT 59.228 43.478 0.00 0.00 38.85 3.36
812 841 3.868077 CAGCTTACATACTGAGCACTTCC 59.132 47.826 0.00 0.00 38.85 3.46
813 842 3.868077 CCAGCTTACATACTGAGCACTTC 59.132 47.826 0.00 0.00 38.85 3.01
814 843 3.369892 CCCAGCTTACATACTGAGCACTT 60.370 47.826 0.00 0.00 38.85 3.16
820 849 1.209504 GCACCCCAGCTTACATACTGA 59.790 52.381 0.00 0.00 35.90 3.41
856 885 3.423206 GCACGCTCACATTTGAAAAGAAG 59.577 43.478 0.00 0.00 0.00 2.85
858 887 2.357323 TGCACGCTCACATTTGAAAAGA 59.643 40.909 0.00 0.00 0.00 2.52
936 965 0.324738 TCCTTGCTCCCGATCTGTCT 60.325 55.000 0.00 0.00 0.00 3.41
1095 1124 2.119832 AGGGCTGTACGGTGAGGT 59.880 61.111 3.10 0.00 0.00 3.85
1140 1169 4.315803 GTTGCTTTCCTACAGCTCTTACA 58.684 43.478 0.00 0.00 38.19 2.41
1445 1474 2.860735 GAGTGTCCTTCATTCCGAATCG 59.139 50.000 0.00 0.00 31.69 3.34
1486 1515 5.635280 CCAACATATTACGACAGCCATCTAG 59.365 44.000 0.00 0.00 0.00 2.43
1493 1522 1.260561 CCGCCAACATATTACGACAGC 59.739 52.381 0.00 0.00 0.00 4.40
1547 1576 6.467677 ACATGCGCTACCATATTAGATTCTT 58.532 36.000 9.73 0.00 0.00 2.52
1572 1601 2.093447 AGAACGTCCCCATTGAGCTAAG 60.093 50.000 0.00 0.00 0.00 2.18
1644 1673 4.815533 AACAGTCACATCATCTGCTAGT 57.184 40.909 0.00 0.00 33.12 2.57
1714 1743 2.918712 ATCGAGTGCTTCCTAATGGG 57.081 50.000 0.00 0.00 0.00 4.00
1725 1754 2.005451 ACTGATCAGCAAATCGAGTGC 58.995 47.619 22.83 14.41 42.55 4.40
1727 1756 2.234661 TCCACTGATCAGCAAATCGAGT 59.765 45.455 22.83 0.00 0.00 4.18
1730 1759 3.189080 TGTTTCCACTGATCAGCAAATCG 59.811 43.478 22.83 4.49 0.00 3.34
1732 1761 4.401022 TCTGTTTCCACTGATCAGCAAAT 58.599 39.130 22.83 0.00 0.00 2.32
1735 1764 2.873245 GCTCTGTTTCCACTGATCAGCA 60.873 50.000 22.83 10.14 31.03 4.41
1744 1773 3.502595 GGTTAAAGGAGCTCTGTTTCCAC 59.497 47.826 14.64 12.73 35.88 4.02
1842 1877 7.592903 GTGGTTTTTGTGAATGCTTTTTCAAAA 59.407 29.630 16.58 16.58 37.36 2.44
2061 2161 9.874205 ATTCAGTGAACTTTCTTTGAAATTTGA 57.126 25.926 7.96 0.00 35.52 2.69
2073 2173 8.935844 ACCTTTTTCAAAATTCAGTGAACTTTC 58.064 29.630 9.25 0.00 33.58 2.62
2169 2290 9.434420 TTCAACTTTGATGAACTGTTTTTCATT 57.566 25.926 0.00 0.00 44.59 2.57
2170 2291 9.434420 TTTCAACTTTGATGAACTGTTTTTCAT 57.566 25.926 0.00 0.00 46.73 2.57
2171 2292 8.824159 TTTCAACTTTGATGAACTGTTTTTCA 57.176 26.923 0.00 0.00 39.79 2.69
2172 2293 9.745323 CTTTTCAACTTTGATGAACTGTTTTTC 57.255 29.630 0.00 0.00 36.57 2.29
2178 2299 8.186821 AGAACTCTTTTCAACTTTGATGAACTG 58.813 33.333 0.00 0.00 36.57 3.16
2281 2517 9.965748 TTTCTTCTTTTTGTTTTCTTTAATGCG 57.034 25.926 0.00 0.00 0.00 4.73
2290 2526 9.811655 CCTTTTCTGTTTCTTCTTTTTGTTTTC 57.188 29.630 0.00 0.00 0.00 2.29
2291 2527 9.554395 TCCTTTTCTGTTTCTTCTTTTTGTTTT 57.446 25.926 0.00 0.00 0.00 2.43
2292 2528 9.725019 ATCCTTTTCTGTTTCTTCTTTTTGTTT 57.275 25.926 0.00 0.00 0.00 2.83
2343 2579 7.704899 CCTGTTCTTTAGTTCGGTTTGATTTTT 59.295 33.333 0.00 0.00 0.00 1.94
2344 2580 7.200455 CCTGTTCTTTAGTTCGGTTTGATTTT 58.800 34.615 0.00 0.00 0.00 1.82
2345 2581 6.238925 CCCTGTTCTTTAGTTCGGTTTGATTT 60.239 38.462 0.00 0.00 0.00 2.17
2346 2582 5.240844 CCCTGTTCTTTAGTTCGGTTTGATT 59.759 40.000 0.00 0.00 0.00 2.57
2347 2583 4.760204 CCCTGTTCTTTAGTTCGGTTTGAT 59.240 41.667 0.00 0.00 0.00 2.57
2348 2584 4.131596 CCCTGTTCTTTAGTTCGGTTTGA 58.868 43.478 0.00 0.00 0.00 2.69
2349 2585 4.131596 TCCCTGTTCTTTAGTTCGGTTTG 58.868 43.478 0.00 0.00 0.00 2.93
2350 2586 4.426736 TCCCTGTTCTTTAGTTCGGTTT 57.573 40.909 0.00 0.00 0.00 3.27
2351 2587 4.426736 TTCCCTGTTCTTTAGTTCGGTT 57.573 40.909 0.00 0.00 0.00 4.44
2352 2588 4.426736 TTTCCCTGTTCTTTAGTTCGGT 57.573 40.909 0.00 0.00 0.00 4.69
2353 2589 5.529800 TCTTTTTCCCTGTTCTTTAGTTCGG 59.470 40.000 0.00 0.00 0.00 4.30
2354 2590 6.482308 TCTCTTTTTCCCTGTTCTTTAGTTCG 59.518 38.462 0.00 0.00 0.00 3.95
2355 2591 7.803279 TCTCTTTTTCCCTGTTCTTTAGTTC 57.197 36.000 0.00 0.00 0.00 3.01
2356 2592 8.768501 ATTCTCTTTTTCCCTGTTCTTTAGTT 57.231 30.769 0.00 0.00 0.00 2.24
2357 2593 9.862149 TTATTCTCTTTTTCCCTGTTCTTTAGT 57.138 29.630 0.00 0.00 0.00 2.24
2359 2595 9.074576 GGTTATTCTCTTTTTCCCTGTTCTTTA 57.925 33.333 0.00 0.00 0.00 1.85
2360 2596 7.563556 TGGTTATTCTCTTTTTCCCTGTTCTTT 59.436 33.333 0.00 0.00 0.00 2.52
2361 2597 7.014326 GTGGTTATTCTCTTTTTCCCTGTTCTT 59.986 37.037 0.00 0.00 0.00 2.52
2362 2598 6.490381 GTGGTTATTCTCTTTTTCCCTGTTCT 59.510 38.462 0.00 0.00 0.00 3.01
2363 2599 6.490381 AGTGGTTATTCTCTTTTTCCCTGTTC 59.510 38.462 0.00 0.00 0.00 3.18
2364 2600 6.373759 AGTGGTTATTCTCTTTTTCCCTGTT 58.626 36.000 0.00 0.00 0.00 3.16
2365 2601 5.953571 AGTGGTTATTCTCTTTTTCCCTGT 58.046 37.500 0.00 0.00 0.00 4.00
2366 2602 6.003950 TGAGTGGTTATTCTCTTTTTCCCTG 58.996 40.000 0.00 0.00 0.00 4.45
2367 2603 6.200878 TGAGTGGTTATTCTCTTTTTCCCT 57.799 37.500 0.00 0.00 0.00 4.20
2368 2604 6.490381 AGTTGAGTGGTTATTCTCTTTTTCCC 59.510 38.462 0.00 0.00 0.00 3.97
2369 2605 7.511959 AGTTGAGTGGTTATTCTCTTTTTCC 57.488 36.000 0.00 0.00 0.00 3.13
2370 2606 7.379797 GCAAGTTGAGTGGTTATTCTCTTTTTC 59.620 37.037 7.16 0.00 0.00 2.29
2371 2607 7.203218 GCAAGTTGAGTGGTTATTCTCTTTTT 58.797 34.615 7.16 0.00 0.00 1.94
2372 2608 6.239036 GGCAAGTTGAGTGGTTATTCTCTTTT 60.239 38.462 7.16 0.00 0.00 2.27
2373 2609 5.241728 GGCAAGTTGAGTGGTTATTCTCTTT 59.758 40.000 7.16 0.00 0.00 2.52
2374 2610 4.762251 GGCAAGTTGAGTGGTTATTCTCTT 59.238 41.667 7.16 0.00 0.00 2.85
2375 2611 4.202461 TGGCAAGTTGAGTGGTTATTCTCT 60.202 41.667 7.16 0.00 0.00 3.10
2376 2612 4.072131 TGGCAAGTTGAGTGGTTATTCTC 58.928 43.478 7.16 0.00 0.00 2.87
2377 2613 4.098914 TGGCAAGTTGAGTGGTTATTCT 57.901 40.909 7.16 0.00 0.00 2.40
2378 2614 4.278419 ACTTGGCAAGTTGAGTGGTTATTC 59.722 41.667 26.54 0.00 39.04 1.75
2379 2615 4.037923 CACTTGGCAAGTTGAGTGGTTATT 59.962 41.667 29.32 1.06 40.46 1.40
2380 2616 3.569701 CACTTGGCAAGTTGAGTGGTTAT 59.430 43.478 29.32 1.28 40.46 1.89
2381 2617 2.948979 CACTTGGCAAGTTGAGTGGTTA 59.051 45.455 29.32 0.00 40.46 2.85
2382 2618 1.750778 CACTTGGCAAGTTGAGTGGTT 59.249 47.619 29.32 2.62 40.46 3.67
2383 2619 1.340991 ACACTTGGCAAGTTGAGTGGT 60.341 47.619 29.32 19.60 42.81 4.16
2384 2620 1.392589 ACACTTGGCAAGTTGAGTGG 58.607 50.000 29.32 18.96 42.81 4.00
2385 2621 2.031682 GCTACACTTGGCAAGTTGAGTG 60.032 50.000 29.32 20.68 40.46 3.51
2386 2622 2.222027 GCTACACTTGGCAAGTTGAGT 58.778 47.619 29.32 24.50 40.46 3.41
2387 2623 1.537202 GGCTACACTTGGCAAGTTGAG 59.463 52.381 29.32 26.34 40.46 3.02
2388 2624 1.142870 AGGCTACACTTGGCAAGTTGA 59.857 47.619 29.32 18.53 40.46 3.18
2389 2625 1.609208 AGGCTACACTTGGCAAGTTG 58.391 50.000 29.32 24.17 40.46 3.16
2390 2626 2.372172 ACTAGGCTACACTTGGCAAGTT 59.628 45.455 29.32 21.29 40.46 2.66
2391 2627 1.978580 ACTAGGCTACACTTGGCAAGT 59.021 47.619 26.54 26.54 44.06 3.16
2392 2628 2.350522 CACTAGGCTACACTTGGCAAG 58.649 52.381 25.06 25.06 0.00 4.01
2393 2629 1.003118 CCACTAGGCTACACTTGGCAA 59.997 52.381 0.00 0.00 0.00 4.52
2394 2630 0.613260 CCACTAGGCTACACTTGGCA 59.387 55.000 0.00 0.00 0.00 4.92
2395 2631 0.613777 ACCACTAGGCTACACTTGGC 59.386 55.000 0.00 0.00 39.06 4.52
2396 2632 2.615493 CCAACCACTAGGCTACACTTGG 60.615 54.545 0.00 0.00 39.06 3.61
2397 2633 2.301870 TCCAACCACTAGGCTACACTTG 59.698 50.000 0.00 0.00 39.06 3.16
2398 2634 2.616524 TCCAACCACTAGGCTACACTT 58.383 47.619 0.00 0.00 39.06 3.16
2399 2635 2.302157 GTTCCAACCACTAGGCTACACT 59.698 50.000 0.00 0.00 39.06 3.55
2400 2636 2.696506 GTTCCAACCACTAGGCTACAC 58.303 52.381 0.00 0.00 39.06 2.90
2401 2637 1.274167 CGTTCCAACCACTAGGCTACA 59.726 52.381 0.00 0.00 39.06 2.74
2402 2638 1.547372 TCGTTCCAACCACTAGGCTAC 59.453 52.381 0.00 0.00 39.06 3.58
2403 2639 1.927487 TCGTTCCAACCACTAGGCTA 58.073 50.000 0.00 0.00 39.06 3.93
2404 2640 1.002087 CTTCGTTCCAACCACTAGGCT 59.998 52.381 0.00 0.00 39.06 4.58
2405 2641 1.439679 CTTCGTTCCAACCACTAGGC 58.560 55.000 0.00 0.00 39.06 3.93
2406 2642 1.270625 TGCTTCGTTCCAACCACTAGG 60.271 52.381 0.00 0.00 42.21 3.02
2407 2643 1.798813 GTGCTTCGTTCCAACCACTAG 59.201 52.381 0.00 0.00 0.00 2.57
2408 2644 1.414919 AGTGCTTCGTTCCAACCACTA 59.585 47.619 0.00 0.00 32.32 2.74
2409 2645 0.180406 AGTGCTTCGTTCCAACCACT 59.820 50.000 0.00 0.00 0.00 4.00
2410 2646 0.586802 GAGTGCTTCGTTCCAACCAC 59.413 55.000 0.00 0.00 0.00 4.16
2411 2647 0.179234 TGAGTGCTTCGTTCCAACCA 59.821 50.000 0.00 0.00 0.00 3.67
2412 2648 0.586802 GTGAGTGCTTCGTTCCAACC 59.413 55.000 0.00 0.00 0.00 3.77
2413 2649 1.583054 AGTGAGTGCTTCGTTCCAAC 58.417 50.000 0.00 0.00 0.00 3.77
2414 2650 2.288825 CCTAGTGAGTGCTTCGTTCCAA 60.289 50.000 0.00 0.00 0.00 3.53
2415 2651 1.272490 CCTAGTGAGTGCTTCGTTCCA 59.728 52.381 0.00 0.00 0.00 3.53
2416 2652 1.544691 TCCTAGTGAGTGCTTCGTTCC 59.455 52.381 0.00 0.00 0.00 3.62
2417 2653 2.597520 GTCCTAGTGAGTGCTTCGTTC 58.402 52.381 0.00 0.00 0.00 3.95
2418 2654 1.068472 CGTCCTAGTGAGTGCTTCGTT 60.068 52.381 0.00 0.00 0.00 3.85
2419 2655 0.522180 CGTCCTAGTGAGTGCTTCGT 59.478 55.000 0.00 0.00 0.00 3.85
2420 2656 0.522180 ACGTCCTAGTGAGTGCTTCG 59.478 55.000 0.00 0.00 0.00 3.79
2421 2657 1.402984 CCACGTCCTAGTGAGTGCTTC 60.403 57.143 0.00 0.00 44.43 3.86
2422 2658 0.603569 CCACGTCCTAGTGAGTGCTT 59.396 55.000 0.00 0.00 44.43 3.91
2423 2659 1.251527 CCCACGTCCTAGTGAGTGCT 61.252 60.000 0.00 0.00 44.43 4.40
2424 2660 1.215647 CCCACGTCCTAGTGAGTGC 59.784 63.158 0.00 0.00 44.43 4.40
2425 2661 1.215647 GCCCACGTCCTAGTGAGTG 59.784 63.158 0.00 0.00 44.43 3.51
2426 2662 2.341101 CGCCCACGTCCTAGTGAGT 61.341 63.158 0.00 0.00 44.43 3.41
2427 2663 2.490217 CGCCCACGTCCTAGTGAG 59.510 66.667 0.00 0.00 44.43 3.51
2438 2674 2.592287 TTTCGAACCCACGCCCAC 60.592 61.111 0.00 0.00 0.00 4.61
2439 2675 2.592287 GTTTCGAACCCACGCCCA 60.592 61.111 0.00 0.00 0.00 5.36
2440 2676 3.359523 GGTTTCGAACCCACGCCC 61.360 66.667 6.89 0.00 46.12 6.13
2448 2684 1.313091 GGGGCATCAGGGTTTCGAAC 61.313 60.000 0.00 0.00 0.00 3.95
2449 2685 1.001393 GGGGCATCAGGGTTTCGAA 60.001 57.895 0.00 0.00 0.00 3.71
2450 2686 1.570857 ATGGGGCATCAGGGTTTCGA 61.571 55.000 0.00 0.00 0.00 3.71
2451 2687 1.076777 ATGGGGCATCAGGGTTTCG 60.077 57.895 0.00 0.00 0.00 3.46
2452 2688 0.259938 AGATGGGGCATCAGGGTTTC 59.740 55.000 0.00 0.00 42.72 2.78
2453 2689 0.712380 AAGATGGGGCATCAGGGTTT 59.288 50.000 0.00 0.00 42.72 3.27
2454 2690 0.712380 AAAGATGGGGCATCAGGGTT 59.288 50.000 0.00 0.00 42.72 4.11
2455 2691 0.712380 AAAAGATGGGGCATCAGGGT 59.288 50.000 0.00 0.00 42.72 4.34
2456 2692 1.870064 AAAAAGATGGGGCATCAGGG 58.130 50.000 0.00 0.00 42.72 4.45
2474 2710 6.238211 CCATATGGTTGTTTTTGAAACGCAAA 60.238 34.615 14.09 0.00 44.38 3.68
2475 2711 5.235186 CCATATGGTTGTTTTTGAAACGCAA 59.765 36.000 14.09 0.00 33.88 4.85
2476 2712 4.747108 CCATATGGTTGTTTTTGAAACGCA 59.253 37.500 14.09 0.00 0.00 5.24
2477 2713 4.151512 CCCATATGGTTGTTTTTGAAACGC 59.848 41.667 20.46 0.00 0.00 4.84
2478 2714 4.151512 GCCCATATGGTTGTTTTTGAAACG 59.848 41.667 20.46 1.06 36.04 3.60
2479 2715 4.151512 CGCCCATATGGTTGTTTTTGAAAC 59.848 41.667 20.46 0.00 36.04 2.78
2480 2716 4.310769 CGCCCATATGGTTGTTTTTGAAA 58.689 39.130 20.46 0.00 36.04 2.69
2481 2717 3.862642 GCGCCCATATGGTTGTTTTTGAA 60.863 43.478 20.46 0.00 36.04 2.69
2482 2718 2.353208 GCGCCCATATGGTTGTTTTTGA 60.353 45.455 20.46 0.00 36.04 2.69
2483 2719 1.999024 GCGCCCATATGGTTGTTTTTG 59.001 47.619 20.46 3.64 36.04 2.44
2484 2720 1.620819 TGCGCCCATATGGTTGTTTTT 59.379 42.857 20.46 0.00 36.04 1.94
2485 2721 1.261480 TGCGCCCATATGGTTGTTTT 58.739 45.000 20.46 0.00 36.04 2.43
2486 2722 1.136695 CATGCGCCCATATGGTTGTTT 59.863 47.619 20.46 0.00 36.04 2.83
2487 2723 0.746063 CATGCGCCCATATGGTTGTT 59.254 50.000 20.46 2.34 36.04 2.83
2488 2724 1.737355 GCATGCGCCCATATGGTTGT 61.737 55.000 20.46 0.00 36.04 3.32
2489 2725 1.007038 GCATGCGCCCATATGGTTG 60.007 57.895 20.46 12.85 36.04 3.77
2490 2726 1.455402 TGCATGCGCCCATATGGTT 60.455 52.632 20.46 0.00 37.32 3.67
2491 2727 1.900016 CTGCATGCGCCCATATGGT 60.900 57.895 20.46 0.00 37.32 3.55
2492 2728 2.959372 CTGCATGCGCCCATATGG 59.041 61.111 15.41 15.41 37.32 2.74
2493 2729 2.257371 GCTGCATGCGCCCATATG 59.743 61.111 19.44 2.44 37.32 1.78
2502 2738 1.299620 CCTATTTGGCGCTGCATGC 60.300 57.895 11.82 11.82 38.57 4.06
2503 2739 0.956633 ATCCTATTTGGCGCTGCATG 59.043 50.000 7.64 0.00 35.26 4.06
2504 2740 1.610522 GAATCCTATTTGGCGCTGCAT 59.389 47.619 7.64 0.00 35.26 3.96
2505 2741 1.024271 GAATCCTATTTGGCGCTGCA 58.976 50.000 7.64 0.00 35.26 4.41
2506 2742 0.040958 CGAATCCTATTTGGCGCTGC 60.041 55.000 7.64 0.00 35.26 5.25
2507 2743 0.040958 GCGAATCCTATTTGGCGCTG 60.041 55.000 7.64 0.00 40.21 5.18
2508 2744 1.166531 GGCGAATCCTATTTGGCGCT 61.167 55.000 7.64 0.00 42.05 5.92
2509 2745 1.282875 GGCGAATCCTATTTGGCGC 59.717 57.895 0.00 0.00 41.79 6.53
2510 2746 0.307760 GTGGCGAATCCTATTTGGCG 59.692 55.000 8.42 0.00 31.83 5.69
2511 2747 0.668535 GGTGGCGAATCCTATTTGGC 59.331 55.000 6.51 6.51 35.26 4.52
2512 2748 1.949525 CAGGTGGCGAATCCTATTTGG 59.050 52.381 0.00 0.00 35.26 3.28
2513 2749 2.614057 GTCAGGTGGCGAATCCTATTTG 59.386 50.000 0.00 0.00 35.26 2.32
2514 2750 2.505819 AGTCAGGTGGCGAATCCTATTT 59.494 45.455 0.00 0.00 35.26 1.40
2515 2751 2.103263 GAGTCAGGTGGCGAATCCTATT 59.897 50.000 0.00 0.00 35.26 1.73
2516 2752 1.689273 GAGTCAGGTGGCGAATCCTAT 59.311 52.381 0.00 0.00 35.26 2.57
2517 2753 1.112113 GAGTCAGGTGGCGAATCCTA 58.888 55.000 0.00 0.00 35.26 2.94
2518 2754 1.901085 GAGTCAGGTGGCGAATCCT 59.099 57.895 0.00 0.00 35.26 3.24
2519 2755 1.519455 CGAGTCAGGTGGCGAATCC 60.519 63.158 0.00 0.00 0.00 3.01
2520 2756 1.519455 CCGAGTCAGGTGGCGAATC 60.519 63.158 0.00 0.00 0.00 2.52
2521 2757 2.579201 CCGAGTCAGGTGGCGAAT 59.421 61.111 0.00 0.00 0.00 3.34
2522 2758 4.373116 GCCGAGTCAGGTGGCGAA 62.373 66.667 0.00 0.00 39.30 4.70
2526 2762 2.357517 GTGTGCCGAGTCAGGTGG 60.358 66.667 0.00 0.00 0.00 4.61
2527 2763 2.734723 CGTGTGCCGAGTCAGGTG 60.735 66.667 0.00 0.00 39.56 4.00
2528 2764 4.664677 GCGTGTGCCGAGTCAGGT 62.665 66.667 0.00 0.00 39.56 4.00
2529 2765 4.662961 TGCGTGTGCCGAGTCAGG 62.663 66.667 0.00 0.00 41.78 3.86
2530 2766 3.406361 GTGCGTGTGCCGAGTCAG 61.406 66.667 0.00 0.00 41.78 3.51
2531 2767 4.214327 TGTGCGTGTGCCGAGTCA 62.214 61.111 0.00 0.00 41.78 3.41
2532 2768 3.702555 GTGTGCGTGTGCCGAGTC 61.703 66.667 0.00 0.00 41.78 3.36
2544 2780 2.284417 GCAAGTACTTATAGCCGTGTGC 59.716 50.000 8.04 0.13 41.71 4.57
2545 2781 3.782046 AGCAAGTACTTATAGCCGTGTG 58.218 45.455 8.04 0.00 0.00 3.82
2546 2782 5.786264 ATAGCAAGTACTTATAGCCGTGT 57.214 39.130 8.04 0.00 0.00 4.49
2547 2783 7.143340 TGTAATAGCAAGTACTTATAGCCGTG 58.857 38.462 8.04 0.00 0.00 4.94
2548 2784 7.281040 TGTAATAGCAAGTACTTATAGCCGT 57.719 36.000 8.04 0.00 0.00 5.68
2549 2785 7.148787 GCTTGTAATAGCAAGTACTTATAGCCG 60.149 40.741 8.04 0.00 45.47 5.52
2550 2786 7.117956 GGCTTGTAATAGCAAGTACTTATAGCC 59.882 40.741 8.04 9.64 45.47 3.93
2551 2787 7.656137 TGGCTTGTAATAGCAAGTACTTATAGC 59.344 37.037 8.04 8.05 45.47 2.97
2552 2788 8.979574 GTGGCTTGTAATAGCAAGTACTTATAG 58.020 37.037 8.04 0.00 45.47 1.31
2553 2789 7.929785 GGTGGCTTGTAATAGCAAGTACTTATA 59.070 37.037 8.04 5.05 45.47 0.98
2554 2790 6.766467 GGTGGCTTGTAATAGCAAGTACTTAT 59.234 38.462 8.04 2.75 45.47 1.73
2555 2791 6.070424 AGGTGGCTTGTAATAGCAAGTACTTA 60.070 38.462 8.04 0.00 45.47 2.24
2556 2792 4.941873 GGTGGCTTGTAATAGCAAGTACTT 59.058 41.667 1.12 1.12 45.47 2.24
2557 2793 4.225267 AGGTGGCTTGTAATAGCAAGTACT 59.775 41.667 7.51 0.00 45.47 2.73
2558 2794 4.332819 CAGGTGGCTTGTAATAGCAAGTAC 59.667 45.833 7.51 7.07 45.47 2.73
2559 2795 4.513442 CAGGTGGCTTGTAATAGCAAGTA 58.487 43.478 7.51 0.00 45.47 2.24
2560 2796 3.347216 CAGGTGGCTTGTAATAGCAAGT 58.653 45.455 7.51 0.00 45.47 3.16
2561 2797 2.684881 CCAGGTGGCTTGTAATAGCAAG 59.315 50.000 0.00 1.84 46.21 4.01
2562 2798 2.620367 CCCAGGTGGCTTGTAATAGCAA 60.620 50.000 0.00 0.00 43.02 3.91
2563 2799 1.064758 CCCAGGTGGCTTGTAATAGCA 60.065 52.381 0.00 0.00 43.02 3.49
2564 2800 1.680338 CCCAGGTGGCTTGTAATAGC 58.320 55.000 0.00 0.00 40.48 2.97
2575 2811 4.722700 CCGTCTTGGCCCAGGTGG 62.723 72.222 3.59 2.51 37.09 4.61
2584 2820 4.308458 TGTGTCGGGCCGTCTTGG 62.308 66.667 27.32 0.00 42.50 3.61
2585 2821 3.041940 GTGTGTCGGGCCGTCTTG 61.042 66.667 27.32 0.00 0.00 3.02
2586 2822 2.391724 AATGTGTGTCGGGCCGTCTT 62.392 55.000 27.32 7.32 0.00 3.01
2587 2823 2.781595 GAATGTGTGTCGGGCCGTCT 62.782 60.000 27.32 2.53 0.00 4.18
2588 2824 2.358247 AATGTGTGTCGGGCCGTC 60.358 61.111 27.32 21.65 0.00 4.79
2589 2825 2.358247 GAATGTGTGTCGGGCCGT 60.358 61.111 27.32 2.83 0.00 5.68
2590 2826 2.358125 TGAATGTGTGTCGGGCCG 60.358 61.111 22.51 22.51 0.00 6.13
2591 2827 2.332654 GGTGAATGTGTGTCGGGCC 61.333 63.158 0.00 0.00 0.00 5.80
2592 2828 2.332654 GGGTGAATGTGTGTCGGGC 61.333 63.158 0.00 0.00 0.00 6.13
2593 2829 1.072332 TGGGTGAATGTGTGTCGGG 59.928 57.895 0.00 0.00 0.00 5.14
2594 2830 0.250295 AGTGGGTGAATGTGTGTCGG 60.250 55.000 0.00 0.00 0.00 4.79
2595 2831 1.148310 GAGTGGGTGAATGTGTGTCG 58.852 55.000 0.00 0.00 0.00 4.35
2596 2832 2.254546 TGAGTGGGTGAATGTGTGTC 57.745 50.000 0.00 0.00 0.00 3.67
2597 2833 2.507484 CATGAGTGGGTGAATGTGTGT 58.493 47.619 0.00 0.00 0.00 3.72
2598 2834 1.814394 CCATGAGTGGGTGAATGTGTG 59.186 52.381 0.00 0.00 42.11 3.82
2599 2835 2.205022 CCATGAGTGGGTGAATGTGT 57.795 50.000 0.00 0.00 42.11 3.72
2609 2845 4.489771 GACCCGGCCCATGAGTGG 62.490 72.222 0.00 0.00 45.61 4.00
2610 2846 4.489771 GGACCCGGCCCATGAGTG 62.490 72.222 0.00 0.00 0.00 3.51
2612 2848 4.181010 CTGGACCCGGCCCATGAG 62.181 72.222 13.30 0.38 32.49 2.90
2618 2854 3.802852 AAACAACCTGGACCCGGCC 62.803 63.158 0.00 0.00 0.00 6.13
2619 2855 2.203437 AAACAACCTGGACCCGGC 60.203 61.111 0.00 0.00 0.00 6.13
2620 2856 0.251165 ATGAAACAACCTGGACCCGG 60.251 55.000 0.00 0.00 0.00 5.73
2621 2857 2.081462 GTATGAAACAACCTGGACCCG 58.919 52.381 0.00 0.00 0.00 5.28
2622 2858 2.443416 GGTATGAAACAACCTGGACCC 58.557 52.381 0.00 0.00 32.72 4.46
2623 2859 2.443416 GGGTATGAAACAACCTGGACC 58.557 52.381 0.00 0.00 35.97 4.46
2624 2860 2.041216 AGGGGTATGAAACAACCTGGAC 59.959 50.000 0.00 0.00 36.11 4.02
2625 2861 2.307686 GAGGGGTATGAAACAACCTGGA 59.692 50.000 0.00 0.00 37.19 3.86
2626 2862 2.620627 GGAGGGGTATGAAACAACCTGG 60.621 54.545 0.00 0.00 37.19 4.45
2627 2863 2.308866 AGGAGGGGTATGAAACAACCTG 59.691 50.000 0.00 0.00 37.19 4.00
2628 2864 2.576648 GAGGAGGGGTATGAAACAACCT 59.423 50.000 0.00 0.00 39.08 3.50
2629 2865 2.576648 AGAGGAGGGGTATGAAACAACC 59.423 50.000 0.00 0.00 34.85 3.77
2630 2866 4.302559 AAGAGGAGGGGTATGAAACAAC 57.697 45.455 0.00 0.00 0.00 3.32
2631 2867 4.473559 CCTAAGAGGAGGGGTATGAAACAA 59.526 45.833 0.00 0.00 37.67 2.83
2632 2868 4.037927 CCTAAGAGGAGGGGTATGAAACA 58.962 47.826 0.00 0.00 37.67 2.83
2633 2869 4.691326 CCTAAGAGGAGGGGTATGAAAC 57.309 50.000 0.00 0.00 37.67 2.78
2643 2879 1.204941 CGAACACACCCTAAGAGGAGG 59.795 57.143 0.00 0.00 37.67 4.30
2644 2880 1.204941 CCGAACACACCCTAAGAGGAG 59.795 57.143 0.00 0.00 37.67 3.69
2645 2881 1.263356 CCGAACACACCCTAAGAGGA 58.737 55.000 0.00 0.00 37.67 3.71
2646 2882 0.974383 ACCGAACACACCCTAAGAGG 59.026 55.000 0.00 0.00 34.30 3.69
2647 2883 2.413837 CAACCGAACACACCCTAAGAG 58.586 52.381 0.00 0.00 0.00 2.85
2648 2884 1.541670 GCAACCGAACACACCCTAAGA 60.542 52.381 0.00 0.00 0.00 2.10
2649 2885 0.872388 GCAACCGAACACACCCTAAG 59.128 55.000 0.00 0.00 0.00 2.18
2650 2886 0.470766 AGCAACCGAACACACCCTAA 59.529 50.000 0.00 0.00 0.00 2.69
2651 2887 0.250124 CAGCAACCGAACACACCCTA 60.250 55.000 0.00 0.00 0.00 3.53
2652 2888 1.525995 CAGCAACCGAACACACCCT 60.526 57.895 0.00 0.00 0.00 4.34
2653 2889 1.822186 ACAGCAACCGAACACACCC 60.822 57.895 0.00 0.00 0.00 4.61
2654 2890 3.821995 ACAGCAACCGAACACACC 58.178 55.556 0.00 0.00 0.00 4.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.