Multiple sequence alignment - TraesCS2D01G353400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G353400 chr2D 100.000 6399 0 0 1 6399 451923132 451929530 0.000000e+00 11817.0
1 TraesCS2D01G353400 chr2D 90.056 1428 89 20 3214 4619 451957502 451958898 0.000000e+00 1801.0
2 TraesCS2D01G353400 chr2D 91.331 992 49 7 4622 5577 451959030 451960020 0.000000e+00 1321.0
3 TraesCS2D01G353400 chr2D 96.476 681 22 2 5720 6399 512111753 512111074 0.000000e+00 1123.0
4 TraesCS2D01G353400 chr2D 80.907 419 28 14 749 1131 451957103 451957505 3.780000e-72 283.0
5 TraesCS2D01G353400 chr2D 80.645 186 14 11 5561 5724 451960034 451960219 2.420000e-24 124.0
6 TraesCS2D01G353400 chr6D 97.645 2081 49 0 1133 3213 69499320 69501400 0.000000e+00 3572.0
7 TraesCS2D01G353400 chr6D 96.613 679 22 1 5721 6399 291931482 291930805 0.000000e+00 1125.0
8 TraesCS2D01G353400 chr4D 97.312 2083 54 1 1133 3213 36539441 36537359 0.000000e+00 3535.0
9 TraesCS2D01G353400 chr4D 97.168 2083 50 4 1133 3213 226568548 226570623 0.000000e+00 3511.0
10 TraesCS2D01G353400 chr4D 87.500 504 63 0 235 738 5249857 5249354 3.330000e-162 582.0
11 TraesCS2D01G353400 chr4D 87.352 506 61 3 235 738 461467339 461467843 1.550000e-160 577.0
12 TraesCS2D01G353400 chr4D 93.991 233 14 0 1 233 164772799 164772567 2.840000e-93 353.0
13 TraesCS2D01G353400 chr7B 94.482 2084 111 3 1133 3214 622864722 622862641 0.000000e+00 3208.0
14 TraesCS2D01G353400 chr7B 95.702 605 23 1 1133 1734 684565367 684565971 0.000000e+00 970.0
15 TraesCS2D01G353400 chr1D 95.891 1874 56 8 1343 3213 7433796 7435651 0.000000e+00 3014.0
16 TraesCS2D01G353400 chr1D 97.037 675 20 0 5725 6399 423032890 423032216 0.000000e+00 1136.0
17 TraesCS2D01G353400 chr1D 96.889 675 19 2 5725 6399 395968874 395968202 0.000000e+00 1129.0
18 TraesCS2D01G353400 chr1D 96.889 675 17 2 5726 6399 395966887 395967558 0.000000e+00 1127.0
19 TraesCS2D01G353400 chr1D 88.508 496 54 3 235 729 416729011 416729504 1.190000e-166 597.0
20 TraesCS2D01G353400 chr1D 87.747 506 59 3 235 738 75673904 75674408 7.150000e-164 588.0
21 TraesCS2D01G353400 chr1D 87.302 504 64 0 235 738 138268467 138268970 1.550000e-160 577.0
22 TraesCS2D01G353400 chr1D 96.491 228 8 0 1 228 448610508 448610281 1.680000e-100 377.0
23 TraesCS2D01G353400 chr1D 94.850 233 12 0 1 233 16495086 16495318 1.310000e-96 364.0
24 TraesCS2D01G353400 chr1D 96.364 110 2 2 1133 1242 299721168 299721061 5.100000e-41 180.0
25 TraesCS2D01G353400 chr3D 97.479 1666 40 1 1133 2798 533410392 533408729 0.000000e+00 2843.0
26 TraesCS2D01G353400 chr3D 96.486 683 22 2 5718 6399 384644503 384643822 0.000000e+00 1127.0
27 TraesCS2D01G353400 chr7D 89.552 2096 187 18 1133 3213 58048858 58050936 0.000000e+00 2628.0
28 TraesCS2D01G353400 chr7D 89.937 1739 150 15 1133 2861 58050381 58052104 0.000000e+00 2218.0
29 TraesCS2D01G353400 chr7D 90.814 1437 120 9 1783 3213 58046463 58047893 0.000000e+00 1912.0
30 TraesCS2D01G353400 chr7D 97.935 678 13 1 5723 6399 614245139 614244462 0.000000e+00 1173.0
31 TraesCS2D01G353400 chr7D 95.279 233 10 1 1 233 105472476 105472245 1.010000e-97 368.0
32 TraesCS2D01G353400 chr7D 94.421 233 12 1 1 233 548943737 548943968 2.190000e-94 357.0
33 TraesCS2D01G353400 chr7A 88.666 2091 219 11 1133 3214 62134951 62137032 0.000000e+00 2532.0
34 TraesCS2D01G353400 chr7A 87.985 2089 219 17 1133 3213 62113912 62115976 0.000000e+00 2438.0
35 TraesCS2D01G353400 chr7A 87.698 504 61 1 235 738 724313759 724314261 2.570000e-163 586.0
36 TraesCS2D01G353400 chr4B 95.977 1541 59 1 1133 2670 149154082 149155622 0.000000e+00 2499.0
37 TraesCS2D01G353400 chr2A 88.897 1297 86 14 4320 5577 597514273 597512996 0.000000e+00 1544.0
38 TraesCS2D01G353400 chr2A 88.023 885 65 14 3484 4355 597515186 597514330 0.000000e+00 1009.0
39 TraesCS2D01G353400 chr2A 94.403 268 14 1 3214 3480 597515517 597515250 1.660000e-110 411.0
40 TraesCS2D01G353400 chr2A 79.808 416 34 13 752 1131 597515915 597515514 2.290000e-64 257.0
41 TraesCS2D01G353400 chr2A 91.954 87 7 0 5561 5647 597512982 597512896 8.710000e-24 122.0
42 TraesCS2D01G353400 chr2A 94.595 37 2 0 4416 4452 597514309 597514273 2.490000e-04 58.4
43 TraesCS2D01G353400 chr2B 87.146 1237 83 22 4466 5652 532080275 532081485 0.000000e+00 1334.0
44 TraesCS2D01G353400 chr2B 89.358 545 45 4 3814 4355 532079692 532080226 0.000000e+00 673.0
45 TraesCS2D01G353400 chr2B 93.931 346 20 1 3476 3820 532079283 532079628 7.350000e-144 521.0
46 TraesCS2D01G353400 chr2B 95.131 267 12 1 3214 3480 532078972 532079237 2.760000e-113 420.0
47 TraesCS2D01G353400 chr2B 94.850 233 12 0 1 233 757343394 757343162 1.310000e-96 364.0
48 TraesCS2D01G353400 chr2B 82.891 339 21 20 830 1131 532078637 532078975 2.940000e-68 270.0
49 TraesCS2D01G353400 chr5D 98.370 675 9 2 5725 6399 14736874 14737546 0.000000e+00 1184.0
50 TraesCS2D01G353400 chr5D 97.474 673 15 2 5727 6399 447681703 447681033 0.000000e+00 1147.0
51 TraesCS2D01G353400 chr5D 88.095 504 57 3 235 738 115412457 115412957 4.270000e-166 595.0
52 TraesCS2D01G353400 chr5D 94.850 233 12 0 1 233 520353781 520353549 1.310000e-96 364.0
53 TraesCS2D01G353400 chr5D 92.946 241 15 2 1 240 5626448 5626209 3.670000e-92 350.0
54 TraesCS2D01G353400 chr6B 88.889 504 52 3 235 738 71845617 71845118 9.120000e-173 617.0
55 TraesCS2D01G353400 chr1B 87.251 502 62 2 235 736 23035918 23036417 7.200000e-159 571.0
56 TraesCS2D01G353400 chr1B 94.421 233 12 1 1 233 601086403 601086634 2.190000e-94 357.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G353400 chr2D 451923132 451929530 6398 False 11817.000000 11817 100.000000 1 6399 1 chr2D.!!$F1 6398
1 TraesCS2D01G353400 chr2D 512111074 512111753 679 True 1123.000000 1123 96.476000 5720 6399 1 chr2D.!!$R1 679
2 TraesCS2D01G353400 chr2D 451957103 451960219 3116 False 882.250000 1801 85.734750 749 5724 4 chr2D.!!$F2 4975
3 TraesCS2D01G353400 chr6D 69499320 69501400 2080 False 3572.000000 3572 97.645000 1133 3213 1 chr6D.!!$F1 2080
4 TraesCS2D01G353400 chr6D 291930805 291931482 677 True 1125.000000 1125 96.613000 5721 6399 1 chr6D.!!$R1 678
5 TraesCS2D01G353400 chr4D 36537359 36539441 2082 True 3535.000000 3535 97.312000 1133 3213 1 chr4D.!!$R2 2080
6 TraesCS2D01G353400 chr4D 226568548 226570623 2075 False 3511.000000 3511 97.168000 1133 3213 1 chr4D.!!$F1 2080
7 TraesCS2D01G353400 chr4D 5249354 5249857 503 True 582.000000 582 87.500000 235 738 1 chr4D.!!$R1 503
8 TraesCS2D01G353400 chr4D 461467339 461467843 504 False 577.000000 577 87.352000 235 738 1 chr4D.!!$F2 503
9 TraesCS2D01G353400 chr7B 622862641 622864722 2081 True 3208.000000 3208 94.482000 1133 3214 1 chr7B.!!$R1 2081
10 TraesCS2D01G353400 chr7B 684565367 684565971 604 False 970.000000 970 95.702000 1133 1734 1 chr7B.!!$F1 601
11 TraesCS2D01G353400 chr1D 7433796 7435651 1855 False 3014.000000 3014 95.891000 1343 3213 1 chr1D.!!$F1 1870
12 TraesCS2D01G353400 chr1D 423032216 423032890 674 True 1136.000000 1136 97.037000 5725 6399 1 chr1D.!!$R3 674
13 TraesCS2D01G353400 chr1D 395968202 395968874 672 True 1129.000000 1129 96.889000 5725 6399 1 chr1D.!!$R2 674
14 TraesCS2D01G353400 chr1D 395966887 395967558 671 False 1127.000000 1127 96.889000 5726 6399 1 chr1D.!!$F5 673
15 TraesCS2D01G353400 chr1D 75673904 75674408 504 False 588.000000 588 87.747000 235 738 1 chr1D.!!$F3 503
16 TraesCS2D01G353400 chr1D 138268467 138268970 503 False 577.000000 577 87.302000 235 738 1 chr1D.!!$F4 503
17 TraesCS2D01G353400 chr3D 533408729 533410392 1663 True 2843.000000 2843 97.479000 1133 2798 1 chr3D.!!$R2 1665
18 TraesCS2D01G353400 chr3D 384643822 384644503 681 True 1127.000000 1127 96.486000 5718 6399 1 chr3D.!!$R1 681
19 TraesCS2D01G353400 chr7D 58046463 58052104 5641 False 2252.666667 2628 90.101000 1133 3213 3 chr7D.!!$F2 2080
20 TraesCS2D01G353400 chr7D 614244462 614245139 677 True 1173.000000 1173 97.935000 5723 6399 1 chr7D.!!$R2 676
21 TraesCS2D01G353400 chr7A 62134951 62137032 2081 False 2532.000000 2532 88.666000 1133 3214 1 chr7A.!!$F2 2081
22 TraesCS2D01G353400 chr7A 62113912 62115976 2064 False 2438.000000 2438 87.985000 1133 3213 1 chr7A.!!$F1 2080
23 TraesCS2D01G353400 chr7A 724313759 724314261 502 False 586.000000 586 87.698000 235 738 1 chr7A.!!$F3 503
24 TraesCS2D01G353400 chr4B 149154082 149155622 1540 False 2499.000000 2499 95.977000 1133 2670 1 chr4B.!!$F1 1537
25 TraesCS2D01G353400 chr2A 597512896 597515915 3019 True 566.900000 1544 89.613333 752 5647 6 chr2A.!!$R1 4895
26 TraesCS2D01G353400 chr2B 532078637 532081485 2848 False 643.600000 1334 89.691400 830 5652 5 chr2B.!!$F1 4822
27 TraesCS2D01G353400 chr5D 14736874 14737546 672 False 1184.000000 1184 98.370000 5725 6399 1 chr5D.!!$F1 674
28 TraesCS2D01G353400 chr5D 447681033 447681703 670 True 1147.000000 1147 97.474000 5727 6399 1 chr5D.!!$R2 672
29 TraesCS2D01G353400 chr5D 115412457 115412957 500 False 595.000000 595 88.095000 235 738 1 chr5D.!!$F2 503

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
152 153 0.102481 CTCACGAACCGGGACCTATG 59.898 60.000 6.32 0.0 32.99 2.23 F
632 636 0.242825 TGCCGAAAGTAGGACTCGTG 59.757 55.000 0.00 0.0 0.00 4.35 F
853 859 0.464870 CTGCTAGCCAGTCAGCTCAT 59.535 55.000 13.29 0.0 43.67 2.90 F
903 922 1.079819 CAGACAATCGCCCTGTCGT 60.080 57.895 5.93 0.0 46.38 4.34 F
3094 4682 0.541392 ATGACCAGCTCGCACCATTA 59.459 50.000 0.00 0.0 0.00 1.90 F
3692 5836 0.394938 ACAGCATAACACACCCGTCA 59.605 50.000 0.00 0.0 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1725 3300 1.258445 CGGGGCTGTACTGAAGGTCT 61.258 60.000 3.61 0.00 0.00 3.85 R
2087 3662 1.276138 TGAAGAAGCTTCTCCGCATCA 59.724 47.619 28.58 23.31 36.28 3.07 R
2831 4409 0.032912 TAGGATCAGGCCGGTGTGTA 60.033 55.000 1.90 0.00 0.00 2.90 R
3274 5356 3.060020 GCTGTAGTACGAGGCGGCA 62.060 63.158 13.08 0.00 33.76 5.69 R
4905 7368 0.664166 TCACCGCGAAAACGTAGTCC 60.664 55.000 8.23 0.00 45.00 3.85 R
5466 7962 0.950555 TGCGTTCCTAGCAACAGCTG 60.951 55.000 13.48 13.48 42.18 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 4.629523 GCCACGAACCGGGACCAA 62.630 66.667 6.32 0.00 28.17 3.67
20 21 2.349755 CCACGAACCGGGACCAAT 59.650 61.111 6.32 0.00 28.17 3.16
21 22 1.302993 CCACGAACCGGGACCAATT 60.303 57.895 6.32 0.00 28.17 2.32
22 23 1.582610 CCACGAACCGGGACCAATTG 61.583 60.000 6.32 0.00 28.17 2.32
23 24 0.887387 CACGAACCGGGACCAATTGT 60.887 55.000 6.32 0.00 28.17 2.71
24 25 0.179012 ACGAACCGGGACCAATTGTT 60.179 50.000 6.32 0.00 0.00 2.83
25 26 0.239879 CGAACCGGGACCAATTGTTG 59.760 55.000 6.32 0.00 0.00 3.33
29 30 1.531739 CCGGGACCAATTGTTGTGGG 61.532 60.000 4.43 0.00 40.75 4.61
30 31 1.671166 GGGACCAATTGTTGTGGGC 59.329 57.895 4.43 0.00 44.26 5.36
33 34 0.318120 GACCAATTGTTGTGGGCCAG 59.682 55.000 6.40 0.00 38.35 4.85
34 35 1.120795 ACCAATTGTTGTGGGCCAGG 61.121 55.000 6.40 4.20 40.75 4.45
35 36 0.831288 CCAATTGTTGTGGGCCAGGA 60.831 55.000 6.40 0.00 32.03 3.86
36 37 0.604578 CAATTGTTGTGGGCCAGGAG 59.395 55.000 6.40 0.00 0.00 3.69
38 39 4.641645 TGTTGTGGGCCAGGAGCG 62.642 66.667 6.40 0.00 45.17 5.03
40 41 4.020617 TTGTGGGCCAGGAGCGAG 62.021 66.667 6.40 0.00 45.17 5.03
47 48 3.801997 CCAGGAGCGAGGCCCATT 61.802 66.667 0.00 0.00 0.00 3.16
48 49 2.515523 CAGGAGCGAGGCCCATTG 60.516 66.667 0.00 0.00 0.00 2.82
49 50 3.801997 AGGAGCGAGGCCCATTGG 61.802 66.667 0.00 0.00 0.00 3.16
50 51 4.115199 GGAGCGAGGCCCATTGGT 62.115 66.667 0.00 0.00 0.00 3.67
51 52 2.514824 GAGCGAGGCCCATTGGTC 60.515 66.667 0.00 0.00 36.05 4.02
52 53 4.115199 AGCGAGGCCCATTGGTCC 62.115 66.667 0.00 0.00 36.69 4.46
55 56 4.506255 GAGGCCCATTGGTCCCGG 62.506 72.222 0.00 0.00 36.69 5.73
57 58 4.376170 GGCCCATTGGTCCCGGTT 62.376 66.667 0.00 0.00 0.00 4.44
59 60 2.437716 CCCATTGGTCCCGGTTCG 60.438 66.667 0.00 0.00 0.00 3.95
60 61 2.349755 CCATTGGTCCCGGTTCGT 59.650 61.111 0.00 0.00 0.00 3.85
61 62 2.038269 CCATTGGTCCCGGTTCGTG 61.038 63.158 0.00 0.00 0.00 4.35
62 63 1.302192 CATTGGTCCCGGTTCGTGT 60.302 57.895 0.00 0.00 0.00 4.49
63 64 1.004200 ATTGGTCCCGGTTCGTGTC 60.004 57.895 0.00 0.00 0.00 3.67
64 65 1.477685 ATTGGTCCCGGTTCGTGTCT 61.478 55.000 0.00 0.00 0.00 3.41
65 66 2.048503 GGTCCCGGTTCGTGTCTG 60.049 66.667 0.00 0.00 0.00 3.51
66 67 2.048503 GTCCCGGTTCGTGTCTGG 60.049 66.667 0.00 0.00 0.00 3.86
67 68 2.203523 TCCCGGTTCGTGTCTGGA 60.204 61.111 0.00 0.00 33.49 3.86
68 69 1.833492 TCCCGGTTCGTGTCTGGAA 60.833 57.895 0.00 0.00 33.49 3.53
69 70 1.666872 CCCGGTTCGTGTCTGGAAC 60.667 63.158 0.00 0.00 42.32 3.62
72 73 3.946907 GTTCGTGTCTGGAACCGG 58.053 61.111 0.00 0.00 38.23 5.28
73 74 1.666872 GTTCGTGTCTGGAACCGGG 60.667 63.158 6.32 0.00 38.23 5.73
74 75 1.833492 TTCGTGTCTGGAACCGGGA 60.833 57.895 6.32 0.00 0.00 5.14
75 76 2.048503 CGTGTCTGGAACCGGGAC 60.049 66.667 6.32 3.26 0.00 4.46
76 77 2.346365 GTGTCTGGAACCGGGACC 59.654 66.667 6.32 9.52 0.00 4.46
77 78 2.122769 TGTCTGGAACCGGGACCA 60.123 61.111 18.36 18.36 34.81 4.02
78 79 1.766864 TGTCTGGAACCGGGACCAA 60.767 57.895 19.53 10.24 35.67 3.67
80 81 0.605589 GTCTGGAACCGGGACCAAAG 60.606 60.000 19.53 11.22 35.67 2.77
82 83 2.035155 GGAACCGGGACCAAAGGG 59.965 66.667 6.32 0.00 41.29 3.95
83 84 2.035155 GAACCGGGACCAAAGGGG 59.965 66.667 6.32 0.00 44.81 4.79
84 85 4.295199 AACCGGGACCAAAGGGGC 62.295 66.667 6.32 0.00 43.93 5.80
90 91 2.359975 GACCAAAGGGGCCAGACG 60.360 66.667 4.39 0.00 42.05 4.18
91 92 2.852075 ACCAAAGGGGCCAGACGA 60.852 61.111 4.39 0.00 42.05 4.20
92 93 2.406002 GACCAAAGGGGCCAGACGAA 62.406 60.000 4.39 0.00 42.05 3.85
94 95 1.971695 CAAAGGGGCCAGACGAACC 60.972 63.158 4.39 0.00 0.00 3.62
95 96 3.546714 AAAGGGGCCAGACGAACCG 62.547 63.158 4.39 0.00 0.00 4.44
99 100 4.754667 GGCCAGACGAACCGGGAC 62.755 72.222 6.32 0.00 0.00 4.46
100 101 4.754667 GCCAGACGAACCGGGACC 62.755 72.222 6.32 0.00 0.00 4.46
101 102 3.307906 CCAGACGAACCGGGACCA 61.308 66.667 6.32 0.00 0.00 4.02
102 103 2.738480 CAGACGAACCGGGACCAA 59.262 61.111 6.32 0.00 0.00 3.67
103 104 1.295423 CAGACGAACCGGGACCAAT 59.705 57.895 6.32 0.00 0.00 3.16
104 105 1.019278 CAGACGAACCGGGACCAATG 61.019 60.000 6.32 0.00 0.00 2.82
105 106 2.359478 ACGAACCGGGACCAATGC 60.359 61.111 6.32 0.00 0.00 3.56
107 108 2.754254 GAACCGGGACCAATGCCC 60.754 66.667 6.32 0.00 42.41 5.36
108 109 4.376170 AACCGGGACCAATGCCCC 62.376 66.667 6.32 0.00 42.92 5.80
112 113 4.041762 GGGACCAATGCCCCACGA 62.042 66.667 4.42 0.00 42.24 4.35
137 138 4.410400 CCGGCCCCTTGGACTCAC 62.410 72.222 0.00 0.00 37.62 3.51
140 141 2.747686 GCCCCTTGGACTCACGAA 59.252 61.111 0.00 0.00 0.00 3.85
141 142 1.671379 GCCCCTTGGACTCACGAAC 60.671 63.158 0.00 0.00 0.00 3.95
142 143 1.003718 CCCCTTGGACTCACGAACC 60.004 63.158 0.00 0.00 0.00 3.62
144 145 1.374252 CCTTGGACTCACGAACCGG 60.374 63.158 0.00 0.00 0.00 5.28
145 146 1.374252 CTTGGACTCACGAACCGGG 60.374 63.158 6.32 0.00 0.00 5.73
146 147 1.812686 CTTGGACTCACGAACCGGGA 61.813 60.000 6.32 0.00 36.75 5.14
147 148 2.091102 TTGGACTCACGAACCGGGAC 62.091 60.000 6.32 0.00 32.99 4.46
149 150 2.203596 ACTCACGAACCGGGACCT 60.204 61.111 6.32 0.00 32.99 3.85
151 152 0.324091 ACTCACGAACCGGGACCTAT 60.324 55.000 6.32 0.00 32.99 2.57
152 153 0.102481 CTCACGAACCGGGACCTATG 59.898 60.000 6.32 0.00 32.99 2.23
156 157 3.094498 AACCGGGACCTATGCCCC 61.094 66.667 6.32 0.00 42.92 5.80
159 160 2.854032 CGGGACCTATGCCCCCAT 60.854 66.667 0.00 0.00 42.92 4.00
160 161 2.846532 GGGACCTATGCCCCCATG 59.153 66.667 0.00 0.00 39.81 3.66
161 162 2.845345 GGGACCTATGCCCCCATGG 61.845 68.421 4.14 4.14 39.81 3.66
171 172 4.123545 CCCCATGGGTCCCGGTTC 62.124 72.222 29.33 0.00 38.25 3.62
172 173 4.483243 CCCATGGGTCCCGGTTCG 62.483 72.222 23.93 0.00 0.00 3.95
175 176 2.605295 ATGGGTCCCGGTTCGTGA 60.605 61.111 2.65 0.00 0.00 4.35
176 177 2.951101 ATGGGTCCCGGTTCGTGAC 61.951 63.158 2.65 0.00 33.83 3.67
177 178 3.308705 GGGTCCCGGTTCGTGACT 61.309 66.667 0.00 0.00 34.89 3.41
179 180 2.567497 GGTCCCGGTTCGTGACTGA 61.567 63.158 0.00 0.00 34.89 3.41
180 181 1.364901 GTCCCGGTTCGTGACTGAA 59.635 57.895 0.00 0.00 36.72 3.02
186 187 3.980583 GTTCGTGACTGAACCAGGA 57.019 52.632 0.00 0.00 41.88 3.86
187 188 1.499049 GTTCGTGACTGAACCAGGAC 58.501 55.000 0.00 0.00 41.88 3.85
188 189 1.068741 GTTCGTGACTGAACCAGGACT 59.931 52.381 0.00 0.00 41.88 3.85
189 190 2.281539 TCGTGACTGAACCAGGACTA 57.718 50.000 0.00 0.00 35.51 2.59
191 192 3.162666 TCGTGACTGAACCAGGACTAAT 58.837 45.455 0.00 0.00 35.51 1.73
193 194 3.600388 GTGACTGAACCAGGACTAATGG 58.400 50.000 0.00 0.00 43.87 3.16
194 195 2.571653 TGACTGAACCAGGACTAATGGG 59.428 50.000 0.00 0.00 42.48 4.00
195 196 1.282157 ACTGAACCAGGACTAATGGGC 59.718 52.381 0.00 0.00 42.48 5.36
196 197 1.561542 CTGAACCAGGACTAATGGGCT 59.438 52.381 0.00 0.00 42.48 5.19
197 198 1.281867 TGAACCAGGACTAATGGGCTG 59.718 52.381 0.00 0.00 42.48 4.85
198 199 0.625849 AACCAGGACTAATGGGCTGG 59.374 55.000 0.00 0.00 42.48 4.85
200 201 1.152881 CAGGACTAATGGGCTGGCC 60.153 63.158 14.23 14.23 0.00 5.36
201 202 1.619363 AGGACTAATGGGCTGGCCA 60.619 57.895 26.08 26.08 37.98 5.36
202 203 1.152881 GGACTAATGGGCTGGCCAG 60.153 63.158 29.34 29.34 37.98 4.85
203 204 1.152881 GACTAATGGGCTGGCCAGG 60.153 63.158 33.46 20.55 37.98 4.45
217 218 2.677875 CAGGCCTGGACCAAAGCC 60.678 66.667 26.14 22.45 46.13 4.35
219 220 2.118294 GGCCTGGACCAAAGCCTT 59.882 61.111 22.59 0.00 42.34 4.35
220 221 2.278330 GGCCTGGACCAAAGCCTTG 61.278 63.158 22.59 0.00 42.34 3.61
223 224 1.413118 CCTGGACCAAAGCCTTGTTT 58.587 50.000 0.00 0.00 0.00 2.83
224 225 1.762370 CCTGGACCAAAGCCTTGTTTT 59.238 47.619 0.00 0.00 0.00 2.43
226 227 2.695147 CTGGACCAAAGCCTTGTTTTCT 59.305 45.455 0.00 0.00 0.00 2.52
227 228 3.888930 CTGGACCAAAGCCTTGTTTTCTA 59.111 43.478 0.00 0.00 0.00 2.10
228 229 4.479158 TGGACCAAAGCCTTGTTTTCTAT 58.521 39.130 0.00 0.00 0.00 1.98
229 230 4.898861 TGGACCAAAGCCTTGTTTTCTATT 59.101 37.500 0.00 0.00 0.00 1.73
230 231 6.071984 TGGACCAAAGCCTTGTTTTCTATTA 58.928 36.000 0.00 0.00 0.00 0.98
231 232 6.208599 TGGACCAAAGCCTTGTTTTCTATTAG 59.791 38.462 0.00 0.00 0.00 1.73
233 234 7.392393 GGACCAAAGCCTTGTTTTCTATTAGTA 59.608 37.037 0.00 0.00 0.00 1.82
306 307 1.652563 GAACCGGCGAGCTTTGTTT 59.347 52.632 9.30 0.00 0.00 2.83
311 312 1.737793 CCGGCGAGCTTTGTTTATCTT 59.262 47.619 9.30 0.00 0.00 2.40
361 362 3.008485 GGGAGCTCTCAAATATTCCGGAT 59.992 47.826 14.64 0.00 0.00 4.18
367 368 5.559035 GCTCTCAAATATTCCGGATCAAACG 60.559 44.000 4.15 0.00 0.00 3.60
372 374 1.821216 ATTCCGGATCAAACGCTTGT 58.179 45.000 4.15 0.00 33.94 3.16
428 430 0.615331 GCTTGACTCTCACCCATGGA 59.385 55.000 15.22 0.00 0.00 3.41
435 437 2.644299 ACTCTCACCCATGGACAAATGA 59.356 45.455 15.22 7.78 0.00 2.57
447 449 6.016527 CCATGGACAAATGATCATCAACTAGG 60.017 42.308 5.56 1.57 0.00 3.02
493 495 1.597854 CTCAAAGCGGCTGTCACCA 60.598 57.895 1.81 0.00 0.00 4.17
518 520 5.160607 TGAAAGGTGATATGTCCGAGTTT 57.839 39.130 0.00 0.00 0.00 2.66
580 584 1.148310 CGTCAGTTTCTCCGCAATGT 58.852 50.000 0.00 0.00 0.00 2.71
581 585 1.136252 CGTCAGTTTCTCCGCAATGTG 60.136 52.381 0.00 0.00 0.00 3.21
582 586 1.873591 GTCAGTTTCTCCGCAATGTGT 59.126 47.619 0.00 0.00 0.00 3.72
583 587 2.290641 GTCAGTTTCTCCGCAATGTGTT 59.709 45.455 0.00 0.00 0.00 3.32
584 588 2.948979 TCAGTTTCTCCGCAATGTGTTT 59.051 40.909 0.00 0.00 0.00 2.83
585 589 3.044986 CAGTTTCTCCGCAATGTGTTTG 58.955 45.455 0.00 0.00 38.43 2.93
587 591 3.380004 AGTTTCTCCGCAATGTGTTTGAA 59.620 39.130 0.00 0.00 37.53 2.69
589 593 2.293170 TCTCCGCAATGTGTTTGAACA 58.707 42.857 0.00 0.00 37.53 3.18
590 594 2.685388 TCTCCGCAATGTGTTTGAACAA 59.315 40.909 0.00 0.00 41.21 2.83
592 596 2.425312 TCCGCAATGTGTTTGAACAACT 59.575 40.909 0.00 0.00 41.21 3.16
594 598 2.463653 CGCAATGTGTTTGAACAACTCG 59.536 45.455 0.00 0.00 41.21 4.18
598 602 3.332761 TGTGTTTGAACAACTCGATGC 57.667 42.857 0.00 0.00 41.21 3.91
599 603 2.942376 TGTGTTTGAACAACTCGATGCT 59.058 40.909 0.00 0.00 41.21 3.79
601 605 3.002246 GTGTTTGAACAACTCGATGCTCA 59.998 43.478 0.00 0.00 41.21 4.26
602 606 3.814842 TGTTTGAACAACTCGATGCTCAT 59.185 39.130 0.00 0.00 35.67 2.90
603 607 4.083855 TGTTTGAACAACTCGATGCTCATC 60.084 41.667 0.00 0.00 35.67 2.92
606 610 3.447229 TGAACAACTCGATGCTCATCCTA 59.553 43.478 4.45 0.00 34.40 2.94
609 613 4.832248 ACAACTCGATGCTCATCCTAAAA 58.168 39.130 4.45 0.00 34.40 1.52
611 615 4.471904 ACTCGATGCTCATCCTAAAACA 57.528 40.909 4.45 0.00 34.40 2.83
612 616 4.832248 ACTCGATGCTCATCCTAAAACAA 58.168 39.130 4.45 0.00 34.40 2.83
613 617 5.431765 ACTCGATGCTCATCCTAAAACAAT 58.568 37.500 4.45 0.00 34.40 2.71
614 618 5.295292 ACTCGATGCTCATCCTAAAACAATG 59.705 40.000 4.45 0.00 34.40 2.82
615 619 4.035558 TCGATGCTCATCCTAAAACAATGC 59.964 41.667 4.45 0.00 34.40 3.56
617 621 2.423185 TGCTCATCCTAAAACAATGCCG 59.577 45.455 0.00 0.00 0.00 5.69
618 622 2.682856 GCTCATCCTAAAACAATGCCGA 59.317 45.455 0.00 0.00 0.00 5.54
619 623 3.128589 GCTCATCCTAAAACAATGCCGAA 59.871 43.478 0.00 0.00 0.00 4.30
620 624 4.380444 GCTCATCCTAAAACAATGCCGAAA 60.380 41.667 0.00 0.00 0.00 3.46
621 625 5.309323 TCATCCTAAAACAATGCCGAAAG 57.691 39.130 0.00 0.00 0.00 2.62
623 627 5.941058 TCATCCTAAAACAATGCCGAAAGTA 59.059 36.000 0.00 0.00 0.00 2.24
624 628 5.873179 TCCTAAAACAATGCCGAAAGTAG 57.127 39.130 0.00 0.00 0.00 2.57
625 629 4.698304 TCCTAAAACAATGCCGAAAGTAGG 59.302 41.667 0.00 0.00 0.00 3.18
626 630 4.698304 CCTAAAACAATGCCGAAAGTAGGA 59.302 41.667 0.00 0.00 0.00 2.94
627 631 4.499037 AAAACAATGCCGAAAGTAGGAC 57.501 40.909 0.00 0.00 0.00 3.85
628 632 3.418684 AACAATGCCGAAAGTAGGACT 57.581 42.857 0.00 0.00 0.00 3.85
632 636 0.242825 TGCCGAAAGTAGGACTCGTG 59.757 55.000 0.00 0.00 0.00 4.35
633 637 0.524862 GCCGAAAGTAGGACTCGTGA 59.475 55.000 0.00 0.00 0.00 4.35
634 638 1.134560 GCCGAAAGTAGGACTCGTGAT 59.865 52.381 0.00 0.00 0.00 3.06
636 640 3.004524 GCCGAAAGTAGGACTCGTGATAT 59.995 47.826 0.00 0.00 0.00 1.63
638 642 5.106237 GCCGAAAGTAGGACTCGTGATATAT 60.106 44.000 0.00 0.00 0.00 0.86
639 643 6.315551 CCGAAAGTAGGACTCGTGATATATG 58.684 44.000 0.00 0.00 0.00 1.78
640 644 6.148976 CCGAAAGTAGGACTCGTGATATATGA 59.851 42.308 0.00 0.00 0.00 2.15
642 646 7.117956 CGAAAGTAGGACTCGTGATATATGAGA 59.882 40.741 5.74 0.00 43.79 3.27
644 648 8.500753 AAGTAGGACTCGTGATATATGAGATC 57.499 38.462 5.74 0.00 43.79 2.75
645 649 7.051623 AGTAGGACTCGTGATATATGAGATCC 58.948 42.308 5.74 8.07 43.79 3.36
646 650 6.073447 AGGACTCGTGATATATGAGATCCT 57.927 41.667 5.74 9.62 43.79 3.24
647 651 6.489603 AGGACTCGTGATATATGAGATCCTT 58.510 40.000 5.74 0.00 43.15 3.36
649 653 6.375736 GGACTCGTGATATATGAGATCCTTCA 59.624 42.308 5.74 0.00 43.79 3.02
651 655 6.717084 ACTCGTGATATATGAGATCCTTCACA 59.283 38.462 5.74 0.00 43.79 3.58
653 657 7.951591 TCGTGATATATGAGATCCTTCACAAA 58.048 34.615 0.00 0.00 33.38 2.83
654 658 8.421002 TCGTGATATATGAGATCCTTCACAAAA 58.579 33.333 0.00 0.00 33.38 2.44
665 669 8.095452 AGATCCTTCACAAAATAGTACCTCAT 57.905 34.615 0.00 0.00 0.00 2.90
666 670 8.207545 AGATCCTTCACAAAATAGTACCTCATC 58.792 37.037 0.00 0.00 0.00 2.92
668 672 7.685481 TCCTTCACAAAATAGTACCTCATCAA 58.315 34.615 0.00 0.00 0.00 2.57
669 673 8.328758 TCCTTCACAAAATAGTACCTCATCAAT 58.671 33.333 0.00 0.00 0.00 2.57
670 674 8.616076 CCTTCACAAAATAGTACCTCATCAATC 58.384 37.037 0.00 0.00 0.00 2.67
671 675 9.388506 CTTCACAAAATAGTACCTCATCAATCT 57.611 33.333 0.00 0.00 0.00 2.40
678 682 9.784531 AAATAGTACCTCATCAATCTATTGTGG 57.215 33.333 2.80 4.61 38.84 4.17
679 683 6.179906 AGTACCTCATCAATCTATTGTGGG 57.820 41.667 2.80 1.63 38.84 4.61
681 685 3.202818 ACCTCATCAATCTATTGTGGGCA 59.797 43.478 2.80 0.00 38.84 5.36
682 686 4.141088 ACCTCATCAATCTATTGTGGGCAT 60.141 41.667 2.80 0.00 38.84 4.40
683 687 4.831155 CCTCATCAATCTATTGTGGGCATT 59.169 41.667 2.80 0.00 38.84 3.56
685 689 5.447757 TCATCAATCTATTGTGGGCATTGA 58.552 37.500 2.80 0.00 37.75 2.57
686 690 6.072649 TCATCAATCTATTGTGGGCATTGAT 58.927 36.000 2.80 0.00 42.36 2.57
687 691 6.208007 TCATCAATCTATTGTGGGCATTGATC 59.792 38.462 2.80 0.00 40.58 2.92
688 692 5.447757 TCAATCTATTGTGGGCATTGATCA 58.552 37.500 0.00 0.00 38.84 2.92
690 694 5.977489 ATCTATTGTGGGCATTGATCATG 57.023 39.130 0.00 0.00 35.73 3.07
691 695 4.795469 TCTATTGTGGGCATTGATCATGT 58.205 39.130 0.00 0.00 34.98 3.21
692 696 4.823442 TCTATTGTGGGCATTGATCATGTC 59.177 41.667 0.00 0.00 36.67 3.06
697 701 1.613836 GGCATTGATCATGTCCCTCC 58.386 55.000 0.00 0.00 34.98 4.30
698 702 1.133699 GGCATTGATCATGTCCCTCCA 60.134 52.381 0.00 0.00 34.98 3.86
699 703 2.490351 GGCATTGATCATGTCCCTCCAT 60.490 50.000 0.00 0.00 34.98 3.41
701 705 4.401022 GCATTGATCATGTCCCTCCATAA 58.599 43.478 0.00 0.00 34.98 1.90
702 706 5.014858 GCATTGATCATGTCCCTCCATAAT 58.985 41.667 0.00 0.00 34.98 1.28
703 707 5.479375 GCATTGATCATGTCCCTCCATAATT 59.521 40.000 0.00 0.00 34.98 1.40
704 708 6.014840 GCATTGATCATGTCCCTCCATAATTT 60.015 38.462 0.00 0.00 34.98 1.82
705 709 7.472381 GCATTGATCATGTCCCTCCATAATTTT 60.472 37.037 0.00 0.00 34.98 1.82
706 710 7.976414 TTGATCATGTCCCTCCATAATTTTT 57.024 32.000 0.00 0.00 0.00 1.94
708 712 7.124721 TGATCATGTCCCTCCATAATTTTTGA 58.875 34.615 0.00 0.00 0.00 2.69
709 713 6.773976 TCATGTCCCTCCATAATTTTTGAC 57.226 37.500 0.00 0.00 0.00 3.18
710 714 5.356751 TCATGTCCCTCCATAATTTTTGACG 59.643 40.000 0.00 0.00 0.00 4.35
711 715 4.912586 TGTCCCTCCATAATTTTTGACGA 58.087 39.130 0.00 0.00 0.00 4.20
712 716 4.698304 TGTCCCTCCATAATTTTTGACGAC 59.302 41.667 0.00 0.00 0.00 4.34
713 717 4.941873 GTCCCTCCATAATTTTTGACGACT 59.058 41.667 0.00 0.00 0.00 4.18
716 720 5.590259 CCCTCCATAATTTTTGACGACTGAT 59.410 40.000 0.00 0.00 0.00 2.90
717 721 6.765989 CCCTCCATAATTTTTGACGACTGATA 59.234 38.462 0.00 0.00 0.00 2.15
718 722 7.282224 CCCTCCATAATTTTTGACGACTGATAA 59.718 37.037 0.00 0.00 0.00 1.75
719 723 8.122952 CCTCCATAATTTTTGACGACTGATAAC 58.877 37.037 0.00 0.00 0.00 1.89
720 724 7.981142 TCCATAATTTTTGACGACTGATAACC 58.019 34.615 0.00 0.00 0.00 2.85
721 725 6.905076 CCATAATTTTTGACGACTGATAACCG 59.095 38.462 0.00 0.00 0.00 4.44
722 726 7.201574 CCATAATTTTTGACGACTGATAACCGA 60.202 37.037 0.00 0.00 0.00 4.69
723 727 6.548441 AATTTTTGACGACTGATAACCGAA 57.452 33.333 0.00 0.00 0.00 4.30
725 729 2.642139 TGACGACTGATAACCGAACC 57.358 50.000 0.00 0.00 0.00 3.62
726 730 1.887854 TGACGACTGATAACCGAACCA 59.112 47.619 0.00 0.00 0.00 3.67
727 731 2.257034 GACGACTGATAACCGAACCAC 58.743 52.381 0.00 0.00 0.00 4.16
729 733 1.067425 CGACTGATAACCGAACCACCA 60.067 52.381 0.00 0.00 0.00 4.17
732 736 2.569853 ACTGATAACCGAACCACCATGA 59.430 45.455 0.00 0.00 0.00 3.07
734 738 4.199310 CTGATAACCGAACCACCATGATT 58.801 43.478 0.00 0.00 0.00 2.57
735 739 4.196193 TGATAACCGAACCACCATGATTC 58.804 43.478 0.00 0.00 0.00 2.52
736 740 1.448985 AACCGAACCACCATGATTCG 58.551 50.000 11.86 11.86 42.79 3.34
738 742 3.451793 CGAACCACCATGATTCGGA 57.548 52.632 0.00 0.00 39.62 4.55
739 743 1.290203 CGAACCACCATGATTCGGAG 58.710 55.000 0.00 0.00 39.62 4.63
740 744 1.134818 CGAACCACCATGATTCGGAGA 60.135 52.381 0.00 0.00 39.62 3.71
741 745 2.483714 CGAACCACCATGATTCGGAGAT 60.484 50.000 0.00 0.00 39.62 2.75
743 747 3.199880 ACCACCATGATTCGGAGATTC 57.800 47.619 0.00 0.00 37.42 2.52
744 748 2.774234 ACCACCATGATTCGGAGATTCT 59.226 45.455 0.00 0.00 37.74 2.40
745 749 3.181461 ACCACCATGATTCGGAGATTCTC 60.181 47.826 5.03 5.03 37.74 2.87
746 750 3.070734 CCACCATGATTCGGAGATTCTCT 59.929 47.826 13.22 0.00 37.74 3.10
747 751 4.281941 CCACCATGATTCGGAGATTCTCTA 59.718 45.833 13.22 0.00 37.74 2.43
773 777 1.589320 CGAAGTCAAACGAAACACCGA 59.411 47.619 0.00 0.00 0.00 4.69
774 778 2.595881 CGAAGTCAAACGAAACACCGAC 60.596 50.000 0.00 0.00 0.00 4.79
775 779 0.925466 AGTCAAACGAAACACCGACG 59.075 50.000 0.00 0.00 0.00 5.12
776 780 0.652465 GTCAAACGAAACACCGACGC 60.652 55.000 0.00 0.00 0.00 5.19
779 783 3.771568 AACGAAACACCGACGCCGA 62.772 57.895 0.00 0.00 38.22 5.54
781 785 3.408851 GAAACACCGACGCCGACC 61.409 66.667 0.00 0.00 38.22 4.79
796 800 0.886563 CGACCGACCTCAGGTAAACT 59.113 55.000 0.00 0.00 43.01 2.66
804 808 4.617530 CGACCTCAGGTAAACTCATCGAAA 60.618 45.833 0.00 0.00 35.25 3.46
810 814 6.285224 TCAGGTAAACTCATCGAAAACTTCA 58.715 36.000 0.00 0.00 0.00 3.02
824 828 1.739562 CTTCACCTCGTGCTCAGCC 60.740 63.158 0.00 0.00 32.98 4.85
827 831 2.919856 ACCTCGTGCTCAGCCACT 60.920 61.111 0.00 0.00 33.60 4.00
828 832 2.433838 CCTCGTGCTCAGCCACTG 60.434 66.667 0.00 0.00 33.60 3.66
829 833 3.117171 CTCGTGCTCAGCCACTGC 61.117 66.667 0.00 0.00 33.60 4.40
830 834 3.871248 CTCGTGCTCAGCCACTGCA 62.871 63.158 0.00 0.00 41.13 4.41
831 835 3.420606 CGTGCTCAGCCACTGCAG 61.421 66.667 13.48 13.48 41.13 4.41
853 859 0.464870 CTGCTAGCCAGTCAGCTCAT 59.535 55.000 13.29 0.00 43.67 2.90
868 874 7.436376 CAGTCAGCTCATCAAGAAAATATACGA 59.564 37.037 0.00 0.00 0.00 3.43
870 876 6.417930 TCAGCTCATCAAGAAAATATACGACG 59.582 38.462 0.00 0.00 0.00 5.12
892 911 2.820059 TCTTGTGCTCGTCAGACAAT 57.180 45.000 0.41 0.00 0.00 2.71
898 917 1.513158 CTCGTCAGACAATCGCCCT 59.487 57.895 0.41 0.00 0.00 5.19
903 922 1.079819 CAGACAATCGCCCTGTCGT 60.080 57.895 5.93 0.00 46.38 4.34
907 926 4.063967 AATCGCCCTGTCGTCGCA 62.064 61.111 0.00 0.00 0.00 5.10
922 941 2.823147 GCAGCTCGCATTCCTGCT 60.823 61.111 4.74 0.00 46.65 4.24
984 1003 3.126000 CCTCAGAAGAAATTGTTCCTCGC 59.874 47.826 0.00 0.00 33.92 5.03
993 1012 4.143333 GTTCCTCGCGGGCTGCTA 62.143 66.667 17.54 4.22 43.27 3.49
1032 1053 4.733725 AAGGAGGGCGGGCCACTA 62.734 66.667 23.67 0.00 37.98 2.74
1048 1093 1.375908 CTACAAGAAGCTGGCCGCA 60.376 57.895 19.30 0.00 42.61 5.69
1127 1172 1.150081 AGCTGCACTGGAGCTTTGT 59.850 52.632 18.68 0.00 44.65 2.83
1128 1173 1.170919 AGCTGCACTGGAGCTTTGTG 61.171 55.000 18.68 9.40 44.65 3.33
1261 1307 8.251750 TCTCTTGATTAACCAAAGTGATTACG 57.748 34.615 0.00 0.00 0.00 3.18
1315 1366 2.213513 TCACACACCGGCCTGATCA 61.214 57.895 0.00 0.00 0.00 2.92
1475 1528 2.780094 CCATCTCGCTCTCGGCTGT 61.780 63.158 0.00 0.00 39.13 4.40
1710 3285 4.022329 CCCCTTAACCTTGTTGTGCTTTAG 60.022 45.833 0.00 0.00 0.00 1.85
1725 3300 3.582647 TGCTTTAGTGAGAACTCCATGGA 59.417 43.478 15.27 15.27 0.00 3.41
2087 3662 1.416401 CTGGGTATACTTGGACGGCAT 59.584 52.381 2.25 0.00 0.00 4.40
2516 4091 4.082523 GACGGTGCTGCTGGCCTA 62.083 66.667 3.32 0.00 40.92 3.93
2660 4235 3.713248 TCAGTCACCATGGCTCTGAATAT 59.287 43.478 23.00 5.54 33.18 1.28
2831 4409 2.032981 CAAACGCAGAGGCCAAGTT 58.967 52.632 5.01 0.01 36.38 2.66
3094 4682 0.541392 ATGACCAGCTCGCACCATTA 59.459 50.000 0.00 0.00 0.00 1.90
3346 5428 1.227380 GCTCTACCAGGGCATCGTG 60.227 63.158 0.00 0.00 0.00 4.35
3386 5468 4.559063 CCATCTGGGGCCTGCTCG 62.559 72.222 0.84 0.00 0.00 5.03
3439 5521 1.331399 GCCCCTACTTCCTTCTCGCT 61.331 60.000 0.00 0.00 0.00 4.93
3458 5541 3.428862 CGCTGGTGAAAATATTTGGGGAC 60.429 47.826 0.39 0.00 0.00 4.46
3459 5542 3.769300 GCTGGTGAAAATATTTGGGGACT 59.231 43.478 0.39 0.00 0.00 3.85
3564 5708 2.095567 GGCGCAACATCTATGCTTATGG 60.096 50.000 10.83 0.00 41.64 2.74
3570 5714 5.751680 CAACATCTATGCTTATGGTTTCCG 58.248 41.667 0.00 0.00 0.00 4.30
3690 5834 1.071699 AGAACAGCATAACACACCCGT 59.928 47.619 0.00 0.00 0.00 5.28
3692 5836 0.394938 ACAGCATAACACACCCGTCA 59.605 50.000 0.00 0.00 0.00 4.35
3749 5893 3.317430 GCTCCTCATTTGGGTCATTGATC 59.683 47.826 0.00 0.00 0.00 2.92
3754 5898 2.595750 TTTGGGTCATTGATCGGGTT 57.404 45.000 0.00 0.00 0.00 4.11
3761 5905 2.874701 GTCATTGATCGGGTTCTCCATG 59.125 50.000 0.00 0.00 34.36 3.66
3823 5967 6.398918 GTTGAGTCTCCTGTTAAGCTATCAA 58.601 40.000 0.00 0.00 0.00 2.57
3824 5968 6.798427 TGAGTCTCCTGTTAAGCTATCAAT 57.202 37.500 0.00 0.00 0.00 2.57
3826 5970 7.268586 TGAGTCTCCTGTTAAGCTATCAATTC 58.731 38.462 0.00 0.00 0.00 2.17
3827 5971 7.124901 TGAGTCTCCTGTTAAGCTATCAATTCT 59.875 37.037 0.00 0.00 0.00 2.40
3829 5973 8.325046 AGTCTCCTGTTAAGCTATCAATTCTTT 58.675 33.333 0.00 0.00 0.00 2.52
3865 6080 4.571889 CGACATGTGAATTCGATGTTCTG 58.428 43.478 18.85 11.36 34.62 3.02
3890 6105 3.378339 GAATGATATGCCTTGTGCTTGC 58.622 45.455 0.00 0.00 42.00 4.01
3901 6116 1.473258 TGTGCTTGCTGTTTGAAGGT 58.527 45.000 0.00 0.00 0.00 3.50
3906 6121 2.229792 CTTGCTGTTTGAAGGTGGCTA 58.770 47.619 0.00 0.00 0.00 3.93
3929 6144 2.772739 CTTGTTGAGCATCCCCTCG 58.227 57.895 0.00 0.00 34.56 4.63
3978 6193 1.891811 TGAAGGAGAGCAGAGTGACAG 59.108 52.381 0.00 0.00 0.00 3.51
3984 6199 1.539388 AGAGCAGAGTGACAGACTTCG 59.461 52.381 0.00 0.00 33.83 3.79
4003 6224 1.920574 CGATTACAAGCAGGTCAGACG 59.079 52.381 0.00 0.00 0.00 4.18
4013 6234 2.048127 GTCAGACGGCACACTCCC 60.048 66.667 0.00 0.00 0.00 4.30
4015 6236 3.314331 CAGACGGCACACTCCCCT 61.314 66.667 0.00 0.00 0.00 4.79
4016 6237 2.526873 AGACGGCACACTCCCCTT 60.527 61.111 0.00 0.00 0.00 3.95
4017 6238 2.147387 AGACGGCACACTCCCCTTT 61.147 57.895 0.00 0.00 0.00 3.11
4063 6294 2.327081 CAGTCTTTGCACACTGATGC 57.673 50.000 12.41 2.41 42.37 3.91
4064 6295 1.068748 CAGTCTTTGCACACTGATGCC 60.069 52.381 12.41 0.00 45.50 4.40
4065 6296 0.953727 GTCTTTGCACACTGATGCCA 59.046 50.000 0.00 0.00 45.50 4.92
4066 6297 1.542915 GTCTTTGCACACTGATGCCAT 59.457 47.619 0.00 0.00 45.50 4.40
4067 6298 2.029649 GTCTTTGCACACTGATGCCATT 60.030 45.455 0.00 0.00 45.50 3.16
4068 6299 2.629137 TCTTTGCACACTGATGCCATTT 59.371 40.909 0.00 0.00 45.50 2.32
4071 6302 4.597404 TTGCACACTGATGCCATTTAAA 57.403 36.364 0.00 0.00 45.50 1.52
4173 6404 1.399089 GCGGCCGTGTTTGTACATATT 59.601 47.619 28.70 0.00 36.50 1.28
4180 6411 5.343860 GCCGTGTTTGTACATATTTGTTTCC 59.656 40.000 0.00 0.00 37.28 3.13
4196 6427 3.587061 TGTTTCCCTCAATCTAAGCCTGA 59.413 43.478 0.00 0.00 0.00 3.86
4269 6500 2.287788 GGTTTTCTGAGGTGTGCACATG 60.288 50.000 24.69 11.07 0.00 3.21
4334 6660 5.890334 ACATGCCGTTAATGGTTAAATCTG 58.110 37.500 15.21 5.47 0.00 2.90
4335 6661 4.364415 TGCCGTTAATGGTTAAATCTGC 57.636 40.909 15.21 0.00 0.00 4.26
4341 6667 6.293955 CCGTTAATGGTTAAATCTGCATAGGG 60.294 42.308 5.47 0.00 0.00 3.53
4344 6670 3.820557 TGGTTAAATCTGCATAGGGAGC 58.179 45.455 0.00 0.00 31.59 4.70
4349 6675 2.405618 ATCTGCATAGGGAGCTGGTA 57.594 50.000 0.00 0.00 31.59 3.25
4496 6823 6.317789 AGATGAACATGGTTTTGTGTACTG 57.682 37.500 0.00 0.00 0.00 2.74
4594 6925 6.506500 AATGTTCCAAAATAGCAGTCTCAG 57.493 37.500 0.00 0.00 0.00 3.35
4602 6933 6.339730 CAAAATAGCAGTCTCAGTCAGATCT 58.660 40.000 0.00 0.00 32.08 2.75
4619 6950 6.255887 GTCAGATCTTAACCCTTTATCGTGTG 59.744 42.308 0.00 0.00 0.00 3.82
4663 7126 5.424757 TGGTGTGCTATAGGTTACATTGAC 58.575 41.667 1.04 0.00 0.00 3.18
4743 7206 5.163953 GGAATTTATCGGTGTGATCTATGCG 60.164 44.000 0.00 0.00 38.57 4.73
4902 7365 1.393539 CTAAACACGAAGGTCGGCATG 59.606 52.381 2.38 0.00 45.59 4.06
4960 7443 1.754803 CTGTGGATGCCGGTTCTAGTA 59.245 52.381 1.90 0.00 0.00 1.82
5036 7519 5.445069 TCATGTCTATACAAAATGTGGGGG 58.555 41.667 0.00 0.00 39.58 5.40
5037 7520 3.626930 TGTCTATACAAAATGTGGGGGC 58.373 45.455 0.00 0.00 30.91 5.80
5140 7623 4.053469 TGTGTTGATCAGAAACGTCTCA 57.947 40.909 0.00 0.00 28.78 3.27
5157 7640 2.359230 AAGGCTGCTTCCGCTGAC 60.359 61.111 0.00 0.00 42.90 3.51
5230 7713 0.383590 AGATGCTCCACGATGACGAG 59.616 55.000 0.00 0.00 42.66 4.18
5285 7768 2.853705 CCCAGTTTTCCGTCCTTGTTA 58.146 47.619 0.00 0.00 0.00 2.41
5287 7770 3.207778 CCAGTTTTCCGTCCTTGTTACA 58.792 45.455 0.00 0.00 0.00 2.41
5310 7793 6.150641 ACAGATGATTCAAGTTGTCATCCTTG 59.849 38.462 23.11 19.48 45.85 3.61
5410 7905 4.019051 ACAGTTGGGTGATCATCTCATTCA 60.019 41.667 5.82 0.00 35.97 2.57
5441 7936 5.221028 GGTTGATTCATGATCCATTTACGCA 60.221 40.000 0.00 0.00 33.60 5.24
5466 7962 2.731976 CCTTCTGATTATACGCTTCGGC 59.268 50.000 0.00 0.00 37.65 5.54
5502 8019 1.069568 CGCACACAATTTCTTACCGCA 60.070 47.619 0.00 0.00 0.00 5.69
5520 8037 5.339990 ACCGCATGTTTATCTGTATTTTGC 58.660 37.500 0.00 0.00 0.00 3.68
5557 8074 3.511699 TGAGTAGCAAGTGAAGCATACG 58.488 45.455 0.00 0.00 0.00 3.06
5620 8166 8.839310 ATAATACAAATATCAGTCCACTCAGC 57.161 34.615 0.00 0.00 0.00 4.26
5640 8186 3.944015 AGCCATTGTATTGAGCAGTTCTC 59.056 43.478 0.00 0.00 42.23 2.87
5663 8231 5.528690 TCATTTCCTGTTCTCAGTTGAGTTG 59.471 40.000 8.85 0.00 42.60 3.16
5666 8234 4.697514 TCCTGTTCTCAGTTGAGTTGAAG 58.302 43.478 8.85 3.83 42.60 3.02
5671 8239 3.461061 TCTCAGTTGAGTTGAAGCAGTG 58.539 45.455 8.85 0.00 42.60 3.66
5673 8241 4.063689 CTCAGTTGAGTTGAAGCAGTGAT 58.936 43.478 0.00 0.00 37.40 3.06
5679 8247 6.040166 AGTTGAGTTGAAGCAGTGATTTCATT 59.960 34.615 10.22 4.17 33.68 2.57
5687 8255 5.640189 AGCAGTGATTTCATTTCCTTCTG 57.360 39.130 0.00 0.00 0.00 3.02
5693 8261 8.396390 CAGTGATTTCATTTCCTTCTGTATCAG 58.604 37.037 0.00 0.00 0.00 2.90
5698 8266 9.917887 ATTTCATTTCCTTCTGTATCAGAGAAT 57.082 29.630 0.00 0.00 41.75 2.40
5700 8268 7.205992 TCATTTCCTTCTGTATCAGAGAATCG 58.794 38.462 0.00 0.00 41.75 3.34
5716 8284 3.322254 AGAATCGTCCCTGGTTAGCATAG 59.678 47.826 0.00 0.00 0.00 2.23
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 0.887387 ACAATTGGTCCCGGTTCGTG 60.887 55.000 10.83 0.00 0.00 4.35
7 8 1.000717 CACAACAATTGGTCCCGGTTC 60.001 52.381 10.83 0.00 34.12 3.62
8 9 1.036707 CACAACAATTGGTCCCGGTT 58.963 50.000 10.83 0.00 34.12 4.44
9 10 0.825840 CCACAACAATTGGTCCCGGT 60.826 55.000 10.83 0.00 34.12 5.28
10 11 1.531739 CCCACAACAATTGGTCCCGG 61.532 60.000 10.83 0.00 31.46 5.73
11 12 1.963679 CCCACAACAATTGGTCCCG 59.036 57.895 10.83 0.00 31.46 5.14
12 13 1.671166 GCCCACAACAATTGGTCCC 59.329 57.895 10.83 0.00 31.46 4.46
13 14 1.118356 TGGCCCACAACAATTGGTCC 61.118 55.000 10.83 0.44 31.46 4.46
14 15 0.318120 CTGGCCCACAACAATTGGTC 59.682 55.000 10.83 0.00 31.46 4.02
15 16 1.120795 CCTGGCCCACAACAATTGGT 61.121 55.000 10.83 0.00 31.46 3.67
16 17 0.831288 TCCTGGCCCACAACAATTGG 60.831 55.000 10.83 0.00 34.12 3.16
17 18 0.604578 CTCCTGGCCCACAACAATTG 59.395 55.000 3.24 3.24 0.00 2.32
19 20 1.607467 GCTCCTGGCCCACAACAAT 60.607 57.895 0.00 0.00 34.27 2.71
20 21 2.203480 GCTCCTGGCCCACAACAA 60.203 61.111 0.00 0.00 34.27 2.83
21 22 4.641645 CGCTCCTGGCCCACAACA 62.642 66.667 0.00 0.00 37.74 3.33
22 23 4.329545 TCGCTCCTGGCCCACAAC 62.330 66.667 0.00 0.00 37.74 3.32
23 24 4.020617 CTCGCTCCTGGCCCACAA 62.021 66.667 0.00 0.00 37.74 3.33
30 31 3.801997 AATGGGCCTCGCTCCTGG 61.802 66.667 4.53 0.00 0.00 4.45
31 32 2.515523 CAATGGGCCTCGCTCCTG 60.516 66.667 4.53 0.00 0.00 3.86
33 34 4.115199 ACCAATGGGCCTCGCTCC 62.115 66.667 4.53 0.00 37.90 4.70
34 35 2.514824 GACCAATGGGCCTCGCTC 60.515 66.667 4.53 0.00 37.90 5.03
41 42 2.754254 GAACCGGGACCAATGGGC 60.754 66.667 6.32 0.00 37.90 5.36
43 44 2.038269 CACGAACCGGGACCAATGG 61.038 63.158 6.32 0.00 28.17 3.16
44 45 1.296056 GACACGAACCGGGACCAATG 61.296 60.000 6.32 0.00 32.98 2.82
45 46 1.004200 GACACGAACCGGGACCAAT 60.004 57.895 6.32 0.00 32.98 3.16
47 48 2.522436 AGACACGAACCGGGACCA 60.522 61.111 6.32 0.00 32.98 4.02
48 49 2.048503 CAGACACGAACCGGGACC 60.049 66.667 6.32 0.00 32.98 4.46
49 50 2.048503 CCAGACACGAACCGGGAC 60.049 66.667 6.32 0.00 32.98 4.46
50 51 1.833492 TTCCAGACACGAACCGGGA 60.833 57.895 6.32 0.00 32.98 5.14
51 52 1.666872 GTTCCAGACACGAACCGGG 60.667 63.158 6.32 0.00 34.75 5.73
52 53 3.946907 GTTCCAGACACGAACCGG 58.053 61.111 0.00 0.00 34.75 5.28
55 56 1.666872 CCCGGTTCCAGACACGAAC 60.667 63.158 0.00 0.00 39.12 3.95
56 57 1.833492 TCCCGGTTCCAGACACGAA 60.833 57.895 0.00 0.00 0.00 3.85
57 58 2.203523 TCCCGGTTCCAGACACGA 60.204 61.111 0.00 0.00 0.00 4.35
59 60 2.047213 TTGGTCCCGGTTCCAGACAC 62.047 60.000 13.29 3.17 35.05 3.67
60 61 1.346479 TTTGGTCCCGGTTCCAGACA 61.346 55.000 13.29 0.00 35.05 3.41
61 62 0.605589 CTTTGGTCCCGGTTCCAGAC 60.606 60.000 13.29 7.03 35.05 3.51
62 63 1.758592 CTTTGGTCCCGGTTCCAGA 59.241 57.895 13.29 9.35 35.05 3.86
63 64 1.303317 CCTTTGGTCCCGGTTCCAG 60.303 63.158 13.29 5.11 35.05 3.86
64 65 2.836187 CCCTTTGGTCCCGGTTCCA 61.836 63.158 10.26 10.26 0.00 3.53
65 66 2.035155 CCCTTTGGTCCCGGTTCC 59.965 66.667 0.00 2.55 0.00 3.62
66 67 2.035155 CCCCTTTGGTCCCGGTTC 59.965 66.667 0.00 0.00 0.00 3.62
67 68 4.295199 GCCCCTTTGGTCCCGGTT 62.295 66.667 0.00 0.00 36.04 4.44
72 73 2.035783 GTCTGGCCCCTTTGGTCC 59.964 66.667 0.00 0.00 38.27 4.46
73 74 2.359975 CGTCTGGCCCCTTTGGTC 60.360 66.667 0.00 0.00 40.11 4.02
74 75 2.457323 TTCGTCTGGCCCCTTTGGT 61.457 57.895 0.00 0.00 36.04 3.67
75 76 1.971695 GTTCGTCTGGCCCCTTTGG 60.972 63.158 0.00 0.00 37.09 3.28
76 77 1.971695 GGTTCGTCTGGCCCCTTTG 60.972 63.158 0.00 0.00 0.00 2.77
77 78 2.434774 GGTTCGTCTGGCCCCTTT 59.565 61.111 0.00 0.00 0.00 3.11
78 79 4.016706 CGGTTCGTCTGGCCCCTT 62.017 66.667 0.00 0.00 0.00 3.95
82 83 4.754667 GTCCCGGTTCGTCTGGCC 62.755 72.222 0.00 0.00 41.11 5.36
83 84 4.754667 GGTCCCGGTTCGTCTGGC 62.755 72.222 0.00 0.00 41.11 4.85
84 85 2.180159 ATTGGTCCCGGTTCGTCTGG 62.180 60.000 0.00 2.18 42.06 3.86
86 87 1.295423 CATTGGTCCCGGTTCGTCT 59.705 57.895 0.00 0.00 0.00 4.18
87 88 2.396157 GCATTGGTCCCGGTTCGTC 61.396 63.158 0.00 0.00 0.00 4.20
88 89 2.359478 GCATTGGTCCCGGTTCGT 60.359 61.111 0.00 0.00 0.00 3.85
89 90 3.131478 GGCATTGGTCCCGGTTCG 61.131 66.667 0.00 0.00 0.00 3.95
90 91 2.754254 GGGCATTGGTCCCGGTTC 60.754 66.667 0.00 0.00 33.43 3.62
97 98 2.438434 CCTCGTGGGGCATTGGTC 60.438 66.667 0.00 0.00 0.00 4.02
120 121 4.410400 GTGAGTCCAAGGGGCCGG 62.410 72.222 0.00 0.00 0.00 6.13
121 122 4.760047 CGTGAGTCCAAGGGGCCG 62.760 72.222 0.00 0.00 0.00 6.13
123 124 1.671379 GTTCGTGAGTCCAAGGGGC 60.671 63.158 0.00 0.00 0.00 5.80
125 126 1.374252 CGGTTCGTGAGTCCAAGGG 60.374 63.158 0.00 0.00 0.00 3.95
127 128 1.374252 CCCGGTTCGTGAGTCCAAG 60.374 63.158 0.00 0.00 0.00 3.61
128 129 1.833492 TCCCGGTTCGTGAGTCCAA 60.833 57.895 0.00 0.00 0.00 3.53
129 130 2.203523 TCCCGGTTCGTGAGTCCA 60.204 61.111 0.00 0.00 0.00 4.02
130 131 2.260743 GTCCCGGTTCGTGAGTCC 59.739 66.667 0.00 0.00 0.00 3.85
131 132 0.962356 TAGGTCCCGGTTCGTGAGTC 60.962 60.000 0.00 0.00 0.00 3.36
132 133 0.324091 ATAGGTCCCGGTTCGTGAGT 60.324 55.000 0.00 0.00 0.00 3.41
133 134 0.102481 CATAGGTCCCGGTTCGTGAG 59.898 60.000 0.00 0.00 0.00 3.51
134 135 1.952102 GCATAGGTCCCGGTTCGTGA 61.952 60.000 0.00 0.00 0.00 4.35
136 137 2.728435 GGCATAGGTCCCGGTTCGT 61.728 63.158 0.00 0.00 0.00 3.85
137 138 2.108362 GGCATAGGTCCCGGTTCG 59.892 66.667 0.00 0.00 0.00 3.95
144 145 2.846532 CCATGGGGGCATAGGTCC 59.153 66.667 2.85 0.00 38.40 4.46
156 157 3.712907 ACGAACCGGGACCCATGG 61.713 66.667 12.15 4.14 0.00 3.66
158 159 2.605295 TCACGAACCGGGACCCAT 60.605 61.111 12.15 0.00 32.99 4.00
164 165 3.946907 GTTCAGTCACGAACCGGG 58.053 61.111 6.32 0.00 39.52 5.73
170 171 2.281539 TAGTCCTGGTTCAGTCACGA 57.718 50.000 0.00 0.00 0.00 4.35
171 172 3.254060 CATTAGTCCTGGTTCAGTCACG 58.746 50.000 0.00 0.00 0.00 4.35
172 173 3.600388 CCATTAGTCCTGGTTCAGTCAC 58.400 50.000 0.00 0.00 0.00 3.67
175 176 1.282157 GCCCATTAGTCCTGGTTCAGT 59.718 52.381 0.00 0.00 31.44 3.41
176 177 1.561542 AGCCCATTAGTCCTGGTTCAG 59.438 52.381 0.00 0.00 31.44 3.02
177 178 1.281867 CAGCCCATTAGTCCTGGTTCA 59.718 52.381 0.00 0.00 31.44 3.18
179 180 0.625849 CCAGCCCATTAGTCCTGGTT 59.374 55.000 0.00 0.00 39.93 3.67
180 181 1.926426 GCCAGCCCATTAGTCCTGGT 61.926 60.000 7.30 0.00 45.16 4.00
183 184 1.619363 TGGCCAGCCCATTAGTCCT 60.619 57.895 0.00 0.00 39.18 3.85
184 185 1.152881 CTGGCCAGCCCATTAGTCC 60.153 63.158 22.33 0.00 44.33 3.85
185 186 1.152881 CCTGGCCAGCCCATTAGTC 60.153 63.158 28.39 0.00 44.33 2.59
186 187 3.010144 CCTGGCCAGCCCATTAGT 58.990 61.111 28.39 0.00 44.33 2.24
187 188 2.520260 GCCTGGCCAGCCCATTAG 60.520 66.667 28.39 12.86 44.33 1.73
200 201 2.677875 GGCTTTGGTCCAGGCCTG 60.678 66.667 26.87 26.87 41.20 4.85
202 203 2.118294 AAGGCTTTGGTCCAGGCC 59.882 61.111 22.87 22.87 44.38 5.19
203 204 1.115326 AACAAGGCTTTGGTCCAGGC 61.115 55.000 13.65 9.58 38.66 4.85
204 205 1.413118 AAACAAGGCTTTGGTCCAGG 58.587 50.000 13.65 0.00 38.66 4.45
205 206 2.695147 AGAAAACAAGGCTTTGGTCCAG 59.305 45.455 13.65 0.00 38.66 3.86
206 207 2.745968 AGAAAACAAGGCTTTGGTCCA 58.254 42.857 13.65 0.00 38.66 4.02
207 208 5.468540 AATAGAAAACAAGGCTTTGGTCC 57.531 39.130 13.65 2.36 38.66 4.46
209 210 8.700439 TTACTAATAGAAAACAAGGCTTTGGT 57.300 30.769 13.65 2.75 38.66 3.67
210 211 8.244113 CCTTACTAATAGAAAACAAGGCTTTGG 58.756 37.037 13.65 0.00 38.66 3.28
211 212 9.010029 TCCTTACTAATAGAAAACAAGGCTTTG 57.990 33.333 7.07 7.07 40.24 2.77
212 213 9.011095 GTCCTTACTAATAGAAAACAAGGCTTT 57.989 33.333 0.00 0.00 32.80 3.51
213 214 8.161425 TGTCCTTACTAATAGAAAACAAGGCTT 58.839 33.333 0.00 0.00 32.80 4.35
214 215 7.686434 TGTCCTTACTAATAGAAAACAAGGCT 58.314 34.615 0.00 0.00 32.80 4.58
215 216 7.606839 ACTGTCCTTACTAATAGAAAACAAGGC 59.393 37.037 0.00 0.00 32.80 4.35
216 217 9.503399 AACTGTCCTTACTAATAGAAAACAAGG 57.497 33.333 0.00 0.00 33.81 3.61
223 224 8.660295 TGGAAGAACTGTCCTTACTAATAGAA 57.340 34.615 0.00 0.00 36.03 2.10
224 225 8.529476 GTTGGAAGAACTGTCCTTACTAATAGA 58.471 37.037 0.00 0.00 36.03 1.98
226 227 8.431910 AGTTGGAAGAACTGTCCTTACTAATA 57.568 34.615 0.00 0.00 36.03 0.98
227 228 7.317722 AGTTGGAAGAACTGTCCTTACTAAT 57.682 36.000 0.00 0.00 36.03 1.73
228 229 6.239515 GGAGTTGGAAGAACTGTCCTTACTAA 60.240 42.308 0.00 0.00 36.03 2.24
229 230 5.245526 GGAGTTGGAAGAACTGTCCTTACTA 59.754 44.000 0.00 0.00 36.03 1.82
230 231 4.040584 GGAGTTGGAAGAACTGTCCTTACT 59.959 45.833 0.00 0.00 36.03 2.24
231 232 4.202326 TGGAGTTGGAAGAACTGTCCTTAC 60.202 45.833 0.00 0.00 36.03 2.34
233 234 2.777692 TGGAGTTGGAAGAACTGTCCTT 59.222 45.455 0.00 0.00 36.03 3.36
293 294 4.419522 TTGAAGATAAACAAAGCTCGCC 57.580 40.909 0.00 0.00 0.00 5.54
361 362 4.336993 AGTTGGAAATGTACAAGCGTTTGA 59.663 37.500 19.42 0.00 37.73 2.69
367 368 2.225491 TCGCAGTTGGAAATGTACAAGC 59.775 45.455 0.00 0.00 0.00 4.01
372 374 2.225491 GCACTTCGCAGTTGGAAATGTA 59.775 45.455 0.00 0.00 41.79 2.29
428 430 5.118990 CGGACCTAGTTGATGATCATTTGT 58.881 41.667 10.14 0.09 0.00 2.83
435 437 1.681793 CCGACGGACCTAGTTGATGAT 59.318 52.381 8.64 0.00 0.00 2.45
476 478 2.508436 TGGTGACAGCCGCTTTGA 59.492 55.556 1.47 0.00 35.01 2.69
493 495 5.745227 ACTCGGACATATCACCTTTCAAAT 58.255 37.500 0.00 0.00 0.00 2.32
518 520 4.483243 GGAGGAATGCCGCCGGAA 62.483 66.667 7.68 0.00 44.55 4.30
558 562 0.387929 TTGCGGAGAAACTGACGAGT 59.612 50.000 0.00 0.00 0.00 4.18
563 567 2.254546 ACACATTGCGGAGAAACTGA 57.745 45.000 0.00 0.00 0.00 3.41
580 584 3.202097 TGAGCATCGAGTTGTTCAAACA 58.798 40.909 3.41 0.00 38.61 2.83
581 585 3.878086 TGAGCATCGAGTTGTTCAAAC 57.122 42.857 3.41 0.00 38.61 2.93
582 586 3.436704 GGATGAGCATCGAGTTGTTCAAA 59.563 43.478 9.22 0.00 39.74 2.69
583 587 3.002791 GGATGAGCATCGAGTTGTTCAA 58.997 45.455 9.22 0.00 39.74 2.69
584 588 2.234661 AGGATGAGCATCGAGTTGTTCA 59.765 45.455 7.83 7.83 40.44 3.18
585 589 2.898705 AGGATGAGCATCGAGTTGTTC 58.101 47.619 4.54 0.00 38.61 3.18
587 591 4.471904 TTTAGGATGAGCATCGAGTTGT 57.528 40.909 4.54 0.00 38.61 3.32
589 593 4.832248 TGTTTTAGGATGAGCATCGAGTT 58.168 39.130 4.54 0.00 38.61 3.01
590 594 4.471904 TGTTTTAGGATGAGCATCGAGT 57.528 40.909 4.54 0.00 38.61 4.18
592 596 4.035558 GCATTGTTTTAGGATGAGCATCGA 59.964 41.667 4.54 0.00 38.61 3.59
594 598 4.614946 GGCATTGTTTTAGGATGAGCATC 58.385 43.478 1.86 1.86 37.11 3.91
598 602 4.963276 TTCGGCATTGTTTTAGGATGAG 57.037 40.909 0.00 0.00 0.00 2.90
599 603 4.764823 ACTTTCGGCATTGTTTTAGGATGA 59.235 37.500 0.00 0.00 0.00 2.92
601 605 5.357032 CCTACTTTCGGCATTGTTTTAGGAT 59.643 40.000 0.00 0.00 0.00 3.24
602 606 4.698304 CCTACTTTCGGCATTGTTTTAGGA 59.302 41.667 0.00 0.00 0.00 2.94
603 607 4.698304 TCCTACTTTCGGCATTGTTTTAGG 59.302 41.667 0.00 0.00 0.00 2.69
606 610 4.142038 AGTCCTACTTTCGGCATTGTTTT 58.858 39.130 0.00 0.00 0.00 2.43
609 613 2.674177 CGAGTCCTACTTTCGGCATTGT 60.674 50.000 0.00 0.00 0.00 2.71
611 615 1.549170 ACGAGTCCTACTTTCGGCATT 59.451 47.619 0.00 0.00 38.58 3.56
612 616 1.135083 CACGAGTCCTACTTTCGGCAT 60.135 52.381 0.00 0.00 38.58 4.40
613 617 0.242825 CACGAGTCCTACTTTCGGCA 59.757 55.000 0.00 0.00 38.58 5.69
614 618 0.524862 TCACGAGTCCTACTTTCGGC 59.475 55.000 0.00 0.00 38.58 5.54
615 619 4.832590 ATATCACGAGTCCTACTTTCGG 57.167 45.455 0.00 0.00 38.58 4.30
617 621 8.325421 TCTCATATATCACGAGTCCTACTTTC 57.675 38.462 0.00 0.00 0.00 2.62
618 622 8.871629 ATCTCATATATCACGAGTCCTACTTT 57.128 34.615 0.00 0.00 0.00 2.66
619 623 7.554835 GGATCTCATATATCACGAGTCCTACTT 59.445 40.741 0.00 0.00 30.64 2.24
620 624 7.051623 GGATCTCATATATCACGAGTCCTACT 58.948 42.308 0.00 0.00 30.64 2.57
621 625 7.051623 AGGATCTCATATATCACGAGTCCTAC 58.948 42.308 14.36 0.00 36.45 3.18
623 627 6.073447 AGGATCTCATATATCACGAGTCCT 57.927 41.667 12.19 12.19 34.90 3.85
624 628 6.375736 TGAAGGATCTCATATATCACGAGTCC 59.624 42.308 0.00 9.64 32.08 3.85
625 629 7.094592 TGTGAAGGATCTCATATATCACGAGTC 60.095 40.741 0.00 0.00 38.75 3.36
626 630 6.717084 TGTGAAGGATCTCATATATCACGAGT 59.283 38.462 0.00 0.00 38.75 4.18
627 631 7.150783 TGTGAAGGATCTCATATATCACGAG 57.849 40.000 0.00 0.00 38.75 4.18
628 632 7.524717 TTGTGAAGGATCTCATATATCACGA 57.475 36.000 0.00 0.00 38.75 4.35
636 640 9.213777 AGGTACTATTTTGTGAAGGATCTCATA 57.786 33.333 0.00 0.00 36.02 2.15
638 642 7.180229 TGAGGTACTATTTTGTGAAGGATCTCA 59.820 37.037 0.00 0.00 41.55 3.27
639 643 7.556844 TGAGGTACTATTTTGTGAAGGATCTC 58.443 38.462 0.00 0.00 41.55 2.75
640 644 7.496346 TGAGGTACTATTTTGTGAAGGATCT 57.504 36.000 0.00 0.00 41.55 2.75
642 646 7.861629 TGATGAGGTACTATTTTGTGAAGGAT 58.138 34.615 0.00 0.00 41.55 3.24
644 648 7.921786 TTGATGAGGTACTATTTTGTGAAGG 57.078 36.000 0.00 0.00 41.55 3.46
645 649 9.388506 AGATTGATGAGGTACTATTTTGTGAAG 57.611 33.333 0.00 0.00 41.55 3.02
653 657 8.378565 CCCACAATAGATTGATGAGGTACTATT 58.621 37.037 9.21 0.00 38.50 1.73
654 658 7.527868 GCCCACAATAGATTGATGAGGTACTAT 60.528 40.741 9.21 0.00 38.50 2.12
656 660 5.455326 GCCCACAATAGATTGATGAGGTACT 60.455 44.000 9.21 0.00 40.52 2.73
657 661 4.757149 GCCCACAATAGATTGATGAGGTAC 59.243 45.833 9.21 0.00 40.14 3.34
658 662 4.411869 TGCCCACAATAGATTGATGAGGTA 59.588 41.667 9.21 1.50 40.14 3.08
659 663 3.202818 TGCCCACAATAGATTGATGAGGT 59.797 43.478 9.21 0.00 40.14 3.85
661 665 5.533528 TCAATGCCCACAATAGATTGATGAG 59.466 40.000 9.21 0.00 40.14 2.90
665 669 5.447757 TGATCAATGCCCACAATAGATTGA 58.552 37.500 9.21 0.00 40.14 2.57
666 670 5.777850 TGATCAATGCCCACAATAGATTG 57.222 39.130 0.00 0.61 43.26 2.67
668 672 5.391256 ACATGATCAATGCCCACAATAGAT 58.609 37.500 0.00 0.00 40.22 1.98
669 673 4.795469 ACATGATCAATGCCCACAATAGA 58.205 39.130 0.00 0.00 40.22 1.98
670 674 4.022589 GGACATGATCAATGCCCACAATAG 60.023 45.833 0.00 0.00 38.63 1.73
671 675 3.890756 GGACATGATCAATGCCCACAATA 59.109 43.478 0.00 0.00 38.63 1.90
672 676 2.696707 GGACATGATCAATGCCCACAAT 59.303 45.455 0.00 0.00 38.63 2.71
673 677 2.101783 GGACATGATCAATGCCCACAA 58.898 47.619 0.00 0.00 38.63 3.33
674 678 1.685803 GGGACATGATCAATGCCCACA 60.686 52.381 19.62 0.00 45.15 4.17
675 679 1.035139 GGGACATGATCAATGCCCAC 58.965 55.000 19.62 5.44 45.15 4.61
676 680 0.928505 AGGGACATGATCAATGCCCA 59.071 50.000 23.94 0.00 46.78 5.36
677 681 1.613836 GAGGGACATGATCAATGCCC 58.386 55.000 17.80 17.80 45.69 5.36
678 682 1.133699 TGGAGGGACATGATCAATGCC 60.134 52.381 11.64 11.64 40.22 4.40
679 683 2.353357 TGGAGGGACATGATCAATGC 57.647 50.000 0.00 0.00 40.22 3.56
681 685 8.426489 CAAAAATTATGGAGGGACATGATCAAT 58.574 33.333 0.00 0.00 32.39 2.57
682 686 7.618907 TCAAAAATTATGGAGGGACATGATCAA 59.381 33.333 0.00 0.00 32.39 2.57
683 687 7.068593 GTCAAAAATTATGGAGGGACATGATCA 59.931 37.037 0.00 0.00 32.39 2.92
685 689 6.039717 CGTCAAAAATTATGGAGGGACATGAT 59.960 38.462 0.00 0.00 32.39 2.45
686 690 5.356751 CGTCAAAAATTATGGAGGGACATGA 59.643 40.000 0.00 0.00 32.39 3.07
687 691 5.356751 TCGTCAAAAATTATGGAGGGACATG 59.643 40.000 0.00 0.00 32.39 3.21
688 692 5.357032 GTCGTCAAAAATTATGGAGGGACAT 59.643 40.000 0.00 0.00 34.90 3.06
690 694 4.941873 AGTCGTCAAAAATTATGGAGGGAC 59.058 41.667 0.00 0.00 0.00 4.46
691 695 4.941263 CAGTCGTCAAAAATTATGGAGGGA 59.059 41.667 0.00 0.00 0.00 4.20
692 696 4.941263 TCAGTCGTCAAAAATTATGGAGGG 59.059 41.667 0.00 0.00 0.00 4.30
694 698 8.122952 GGTTATCAGTCGTCAAAAATTATGGAG 58.877 37.037 0.00 0.00 0.00 3.86
695 699 7.201574 CGGTTATCAGTCGTCAAAAATTATGGA 60.202 37.037 0.00 0.00 0.00 3.41
697 701 7.680982 TCGGTTATCAGTCGTCAAAAATTATG 58.319 34.615 0.00 0.00 0.00 1.90
698 702 7.837202 TCGGTTATCAGTCGTCAAAAATTAT 57.163 32.000 0.00 0.00 0.00 1.28
699 703 7.360269 GGTTCGGTTATCAGTCGTCAAAAATTA 60.360 37.037 0.00 0.00 0.00 1.40
701 705 5.106830 GGTTCGGTTATCAGTCGTCAAAAAT 60.107 40.000 0.00 0.00 0.00 1.82
702 706 4.211794 GGTTCGGTTATCAGTCGTCAAAAA 59.788 41.667 0.00 0.00 0.00 1.94
703 707 3.742369 GGTTCGGTTATCAGTCGTCAAAA 59.258 43.478 0.00 0.00 0.00 2.44
704 708 3.243805 TGGTTCGGTTATCAGTCGTCAAA 60.244 43.478 0.00 0.00 0.00 2.69
705 709 2.296752 TGGTTCGGTTATCAGTCGTCAA 59.703 45.455 0.00 0.00 0.00 3.18
706 710 1.887854 TGGTTCGGTTATCAGTCGTCA 59.112 47.619 0.00 0.00 0.00 4.35
708 712 1.067354 GGTGGTTCGGTTATCAGTCGT 60.067 52.381 0.00 0.00 0.00 4.34
709 713 1.067425 TGGTGGTTCGGTTATCAGTCG 60.067 52.381 0.00 0.00 0.00 4.18
710 714 2.754946 TGGTGGTTCGGTTATCAGTC 57.245 50.000 0.00 0.00 0.00 3.51
711 715 2.569853 TCATGGTGGTTCGGTTATCAGT 59.430 45.455 0.00 0.00 0.00 3.41
712 716 3.260475 TCATGGTGGTTCGGTTATCAG 57.740 47.619 0.00 0.00 0.00 2.90
713 717 3.924114 ATCATGGTGGTTCGGTTATCA 57.076 42.857 0.00 0.00 0.00 2.15
721 725 2.691409 TCTCCGAATCATGGTGGTTC 57.309 50.000 0.00 0.00 34.26 3.62
722 726 3.200825 AGAATCTCCGAATCATGGTGGTT 59.799 43.478 0.00 0.00 0.00 3.67
723 727 2.774234 AGAATCTCCGAATCATGGTGGT 59.226 45.455 0.00 0.00 0.00 4.16
744 748 2.802247 TCGTTTGACTTCGACTCGTAGA 59.198 45.455 11.59 0.00 0.00 2.59
745 749 3.179010 TCGTTTGACTTCGACTCGTAG 57.821 47.619 3.72 3.72 0.00 3.51
746 750 3.607422 TTCGTTTGACTTCGACTCGTA 57.393 42.857 0.00 0.00 35.82 3.43
747 751 2.480224 TTCGTTTGACTTCGACTCGT 57.520 45.000 0.00 0.00 35.82 4.18
775 779 1.880819 TTTACCTGAGGTCGGTCGGC 61.881 60.000 7.77 0.00 37.09 5.54
776 780 0.108945 GTTTACCTGAGGTCGGTCGG 60.109 60.000 7.77 0.00 37.09 4.79
779 783 2.005370 TGAGTTTACCTGAGGTCGGT 57.995 50.000 7.77 0.00 37.09 4.69
781 785 2.422479 TCGATGAGTTTACCTGAGGTCG 59.578 50.000 7.77 2.63 37.09 4.79
783 787 4.884668 TTTCGATGAGTTTACCTGAGGT 57.115 40.909 10.00 10.00 40.16 3.85
788 792 5.469084 GGTGAAGTTTTCGATGAGTTTACCT 59.531 40.000 16.41 0.00 34.05 3.08
796 800 3.057019 CACGAGGTGAAGTTTTCGATGA 58.943 45.455 0.00 0.00 35.23 2.92
804 808 0.601311 GCTGAGCACGAGGTGAAGTT 60.601 55.000 0.00 0.00 35.23 2.66
810 814 2.919856 AGTGGCTGAGCACGAGGT 60.920 61.111 6.82 0.00 0.00 3.85
829 833 1.470632 GCTGACTGGCTAGCAGTACTG 60.471 57.143 18.93 18.93 39.67 2.74
830 834 0.820871 GCTGACTGGCTAGCAGTACT 59.179 55.000 18.24 0.00 39.67 2.73
831 835 0.820871 AGCTGACTGGCTAGCAGTAC 59.179 55.000 18.24 10.60 42.29 2.73
853 859 6.533723 ACAAGATGCGTCGTATATTTTCTTGA 59.466 34.615 22.23 0.00 40.62 3.02
886 892 1.215647 GACGACAGGGCGATTGTCT 59.784 57.895 0.00 2.27 42.11 3.41
888 907 2.126071 CGACGACAGGGCGATTGT 60.126 61.111 0.00 0.00 34.83 2.71
907 926 2.823147 GCAGCAGGAATGCGAGCT 60.823 61.111 11.61 0.00 40.27 4.09
984 1003 1.827344 TCCATCATAGATAGCAGCCCG 59.173 52.381 0.00 0.00 0.00 6.13
993 1012 1.478510 GCGTCGGGATCCATCATAGAT 59.521 52.381 15.23 0.00 0.00 1.98
1125 1170 2.224744 TGGGCAGAGATAACAAAGCACA 60.225 45.455 0.00 0.00 32.26 4.57
1127 1172 2.618816 CCTGGGCAGAGATAACAAAGCA 60.619 50.000 0.00 0.00 0.00 3.91
1128 1173 2.019984 CCTGGGCAGAGATAACAAAGC 58.980 52.381 0.00 0.00 0.00 3.51
1129 1174 2.025887 ACCCTGGGCAGAGATAACAAAG 60.026 50.000 14.08 0.00 0.00 2.77
1130 1175 1.992557 ACCCTGGGCAGAGATAACAAA 59.007 47.619 14.08 0.00 0.00 2.83
1131 1176 1.668826 ACCCTGGGCAGAGATAACAA 58.331 50.000 14.08 0.00 0.00 2.83
1315 1366 2.224185 TGTGTGTGGAGCGTGAGTTTAT 60.224 45.455 0.00 0.00 0.00 1.40
1475 1528 6.014584 AGGTAGATTTGATCGGTACATGCATA 60.015 38.462 0.00 0.00 0.00 3.14
1710 3285 2.183679 AGGTCTCCATGGAGTTCTCAC 58.816 52.381 35.34 26.30 42.49 3.51
1725 3300 1.258445 CGGGGCTGTACTGAAGGTCT 61.258 60.000 3.61 0.00 0.00 3.85
2087 3662 1.276138 TGAAGAAGCTTCTCCGCATCA 59.724 47.619 28.58 23.31 36.28 3.07
2660 4235 0.836606 TGGGCAGAGACAACACTTGA 59.163 50.000 0.00 0.00 0.00 3.02
2821 4399 0.953960 CCGGTGTGTAACTTGGCCTC 60.954 60.000 3.32 0.00 38.04 4.70
2831 4409 0.032912 TAGGATCAGGCCGGTGTGTA 60.033 55.000 1.90 0.00 0.00 2.90
3274 5356 3.060020 GCTGTAGTACGAGGCGGCA 62.060 63.158 13.08 0.00 33.76 5.69
3329 5411 1.043116 TCCACGATGCCCTGGTAGAG 61.043 60.000 0.00 0.00 0.00 2.43
3439 5521 5.650283 AGAAGTCCCCAAATATTTTCACCA 58.350 37.500 0.00 0.00 0.00 4.17
3458 5541 4.214971 CAGTGTGGTGGAATCAAGAAGAAG 59.785 45.833 0.00 0.00 0.00 2.85
3459 5542 4.136796 CAGTGTGGTGGAATCAAGAAGAA 58.863 43.478 0.00 0.00 0.00 2.52
3548 5692 5.296780 CACGGAAACCATAAGCATAGATGTT 59.703 40.000 0.00 0.00 0.00 2.71
3564 5708 2.053627 CAGATTGCTTTGCACGGAAAC 58.946 47.619 0.00 0.00 38.71 2.78
3570 5714 1.079612 GCCCCAGATTGCTTTGCAC 60.080 57.895 0.00 0.00 38.71 4.57
3690 5834 4.794439 CATGTCGGCGGCGAGTGA 62.794 66.667 35.53 21.32 0.00 3.41
3710 5854 0.687427 AGCAAAACCCACACAGGCTT 60.687 50.000 0.00 0.00 35.39 4.35
3749 5893 2.202932 CCGCTCATGGAGAACCCG 60.203 66.667 0.00 0.00 37.93 5.28
3754 5898 1.267574 AAGAAGGCCGCTCATGGAGA 61.268 55.000 10.15 0.00 0.00 3.71
3823 5967 1.755179 CGGCATGTGAGGGAAAGAAT 58.245 50.000 0.00 0.00 0.00 2.40
3824 5968 0.960364 GCGGCATGTGAGGGAAAGAA 60.960 55.000 0.00 0.00 0.00 2.52
3826 5970 2.753966 CGCGGCATGTGAGGGAAAG 61.754 63.158 0.00 0.00 0.00 2.62
3827 5971 2.745884 CGCGGCATGTGAGGGAAA 60.746 61.111 0.00 0.00 0.00 3.13
3829 5973 4.451150 GTCGCGGCATGTGAGGGA 62.451 66.667 5.47 0.00 37.89 4.20
3850 6065 1.066502 TCGCCCAGAACATCGAATTCA 60.067 47.619 13.49 0.00 0.00 2.57
3890 6105 2.094545 GCCAATAGCCACCTTCAAACAG 60.095 50.000 0.00 0.00 34.35 3.16
3901 6116 1.176527 GCTCAACAAGCCAATAGCCA 58.823 50.000 0.00 0.00 45.92 4.75
3929 6144 1.072159 AGCTGAGAACACCAGTGCC 59.928 57.895 0.00 0.00 34.29 5.01
3978 6193 3.585862 TGACCTGCTTGTAATCGAAGTC 58.414 45.455 0.00 0.00 0.00 3.01
3984 6199 2.271800 CCGTCTGACCTGCTTGTAATC 58.728 52.381 1.55 0.00 0.00 1.75
4025 6246 4.019919 CTGCATTCAGTAATTCAACCCG 57.980 45.455 0.00 0.00 35.61 5.28
4173 6404 4.042809 TCAGGCTTAGATTGAGGGAAACAA 59.957 41.667 0.00 0.00 0.00 2.83
4180 6411 4.133078 GGATGTTCAGGCTTAGATTGAGG 58.867 47.826 0.00 0.00 0.00 3.86
4196 6427 4.664688 AGAACATTCCTCCTTGGATGTT 57.335 40.909 6.18 6.18 45.68 2.71
4233 6464 3.462205 AGAAAACCCTGGTCCAGTTAGTT 59.538 43.478 17.85 14.23 0.00 2.24
4269 6500 6.528537 AGTCTGTGATGATGATATCTAGGC 57.471 41.667 3.98 0.00 0.00 3.93
4310 6542 6.459024 GCAGATTTAACCATTAACGGCATGTA 60.459 38.462 0.00 0.00 0.00 2.29
4312 6544 4.739716 GCAGATTTAACCATTAACGGCATG 59.260 41.667 0.00 0.00 0.00 4.06
4314 6546 3.759086 TGCAGATTTAACCATTAACGGCA 59.241 39.130 0.00 0.00 0.00 5.69
4315 6547 4.364415 TGCAGATTTAACCATTAACGGC 57.636 40.909 0.00 0.00 0.00 5.68
4316 6548 6.293955 CCCTATGCAGATTTAACCATTAACGG 60.294 42.308 0.00 0.00 0.00 4.44
4317 6549 6.485313 TCCCTATGCAGATTTAACCATTAACG 59.515 38.462 0.00 0.00 0.00 3.18
4334 6660 3.181450 ACTGAAATACCAGCTCCCTATGC 60.181 47.826 0.00 0.00 37.68 3.14
4335 6661 4.696479 ACTGAAATACCAGCTCCCTATG 57.304 45.455 0.00 0.00 37.68 2.23
4341 6667 4.572795 GGCTTCTAACTGAAATACCAGCTC 59.427 45.833 0.00 0.00 37.68 4.09
4344 6670 6.825721 AGATTGGCTTCTAACTGAAATACCAG 59.174 38.462 0.00 0.00 35.23 4.00
4349 6675 5.574188 ACCAGATTGGCTTCTAACTGAAAT 58.426 37.500 0.00 0.00 42.67 2.17
4409 6735 0.899019 TGCATCAAAGTGGCATGCAT 59.101 45.000 21.36 1.15 46.22 3.96
4411 6737 1.073177 GTTGCATCAAAGTGGCATGC 58.927 50.000 9.90 9.90 42.81 4.06
4412 6738 2.442212 TGTTGCATCAAAGTGGCATG 57.558 45.000 0.00 0.00 37.39 4.06
4450 6776 8.492415 TCTACTTATGGTTATGGAAGCTACAT 57.508 34.615 8.64 8.64 34.03 2.29
4451 6777 7.907841 TCTACTTATGGTTATGGAAGCTACA 57.092 36.000 0.00 0.00 34.03 2.74
4452 6778 8.585881 TCATCTACTTATGGTTATGGAAGCTAC 58.414 37.037 0.00 0.00 34.03 3.58
4453 6779 8.721133 TCATCTACTTATGGTTATGGAAGCTA 57.279 34.615 0.00 0.00 34.03 3.32
4454 6780 7.618019 TCATCTACTTATGGTTATGGAAGCT 57.382 36.000 0.00 0.00 34.03 3.74
4455 6781 7.715249 TGTTCATCTACTTATGGTTATGGAAGC 59.285 37.037 0.00 0.00 0.00 3.86
4456 6782 9.784531 ATGTTCATCTACTTATGGTTATGGAAG 57.215 33.333 0.00 0.00 0.00 3.46
4457 6783 9.559732 CATGTTCATCTACTTATGGTTATGGAA 57.440 33.333 0.00 0.00 0.00 3.53
4458 6784 8.156820 CCATGTTCATCTACTTATGGTTATGGA 58.843 37.037 0.00 0.00 35.31 3.41
4459 6785 7.939039 ACCATGTTCATCTACTTATGGTTATGG 59.061 37.037 0.00 0.00 44.16 2.74
4460 6786 8.908786 ACCATGTTCATCTACTTATGGTTATG 57.091 34.615 0.00 0.00 44.16 1.90
4518 6847 8.539770 AGCATATTAGTCGGATTTGAATGTAG 57.460 34.615 0.00 0.00 0.00 2.74
4540 6869 0.679002 GCAGGCCATCTTCAGAAGCA 60.679 55.000 5.01 0.00 0.00 3.91
4562 6893 5.574443 GCTATTTTGGAACATTTGAGCAGAC 59.426 40.000 0.00 0.00 39.30 3.51
4594 6925 6.255887 CACACGATAAAGGGTTAAGATCTGAC 59.744 42.308 0.00 0.00 0.00 3.51
4743 7206 2.668550 GAACCCACTGCACCGACC 60.669 66.667 0.00 0.00 0.00 4.79
4902 7365 2.774126 GCGAAAACGTAGTCCGGC 59.226 61.111 0.00 0.00 45.00 6.13
4905 7368 0.664166 TCACCGCGAAAACGTAGTCC 60.664 55.000 8.23 0.00 45.00 3.85
4960 7443 1.683385 GGACAAAGCTTGGAGCAAAGT 59.317 47.619 8.15 0.00 45.56 2.66
5050 7533 2.933834 AGTAGGCCACCCCACCAC 60.934 66.667 5.01 0.00 35.39 4.16
5065 7548 1.598962 ATTCAGCGTGTGCAGCAGT 60.599 52.632 0.00 0.00 46.23 4.40
5157 7640 3.390135 TGAGGAACAAGAAACAGTAGCG 58.610 45.455 0.00 0.00 0.00 4.26
5230 7713 3.944055 TCCTTGACAGCTTCTGTAGAC 57.056 47.619 0.00 0.00 45.44 2.59
5266 7749 3.207778 TGTAACAAGGACGGAAAACTGG 58.792 45.455 0.00 0.00 0.00 4.00
5285 7768 5.813383 AGGATGACAACTTGAATCATCTGT 58.187 37.500 16.32 6.94 45.34 3.41
5287 7770 5.125097 GCAAGGATGACAACTTGAATCATCT 59.875 40.000 20.95 5.88 45.34 2.90
5310 7793 4.880120 TCTCATCTTGAACATCCTCAATGC 59.120 41.667 0.00 0.00 39.12 3.56
5410 7905 6.520021 TGGATCATGAATCAACCCTCTTAT 57.480 37.500 0.00 0.00 35.96 1.73
5441 7936 4.608951 GAAGCGTATAATCAGAAGGTCGT 58.391 43.478 0.00 0.00 0.00 4.34
5466 7962 0.950555 TGCGTTCCTAGCAACAGCTG 60.951 55.000 13.48 13.48 42.18 4.24
5482 7999 1.069568 TGCGGTAAGAAATTGTGTGCG 60.070 47.619 0.00 0.00 0.00 5.34
5484 8001 4.159377 ACATGCGGTAAGAAATTGTGTG 57.841 40.909 0.00 0.00 0.00 3.82
5520 8037 4.509600 GCTACTCAGCTGCTTTTACCTATG 59.490 45.833 9.47 0.00 44.93 2.23
5615 8161 3.276857 ACTGCTCAATACAATGGCTGAG 58.723 45.455 4.72 4.72 38.66 3.35
5619 8165 4.284378 GAGAACTGCTCAATACAATGGC 57.716 45.455 0.00 0.00 43.38 4.40
5647 8193 3.872696 TGCTTCAACTCAACTGAGAACA 58.127 40.909 13.61 0.19 44.74 3.18
5648 8194 3.873952 ACTGCTTCAACTCAACTGAGAAC 59.126 43.478 13.61 0.00 44.74 3.01
5663 8231 6.091437 CAGAAGGAAATGAAATCACTGCTTC 58.909 40.000 15.18 15.18 38.56 3.86
5666 8234 5.382618 ACAGAAGGAAATGAAATCACTGC 57.617 39.130 0.00 0.00 0.00 4.40
5671 8239 8.954950 TCTCTGATACAGAAGGAAATGAAATC 57.045 34.615 0.00 0.00 40.18 2.17
5673 8241 9.388506 GATTCTCTGATACAGAAGGAAATGAAA 57.611 33.333 0.00 0.00 40.18 2.69
5679 8247 5.067936 GGACGATTCTCTGATACAGAAGGAA 59.932 44.000 0.00 0.00 40.18 3.36
5693 8261 1.480954 TGCTAACCAGGGACGATTCTC 59.519 52.381 0.00 0.00 0.00 2.87
5698 8266 2.029623 GACTATGCTAACCAGGGACGA 58.970 52.381 0.00 0.00 0.00 4.20
5700 8268 4.489306 AAAGACTATGCTAACCAGGGAC 57.511 45.455 0.00 0.00 0.00 4.46
5841 8409 3.128349 GACACTTTTGTTGCCTAGACGA 58.872 45.455 0.00 0.00 35.47 4.20
5974 8542 3.648914 GGTAGGTGACCCATACCCT 57.351 57.895 8.49 0.00 43.25 4.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.