Multiple sequence alignment - TraesCS2D01G352900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G352900 chr2D 100.000 3544 0 0 1 3544 451286450 451289993 0.000000e+00 6545
1 TraesCS2D01G352900 chr2A 95.198 1895 65 15 883 2758 598162849 598160962 0.000000e+00 2972
2 TraesCS2D01G352900 chr2A 88.444 649 37 13 11 639 598163691 598163061 0.000000e+00 749
3 TraesCS2D01G352900 chr2A 89.809 157 14 2 3189 3344 598160887 598160732 2.160000e-47 200
4 TraesCS2D01G352900 chr2A 94.737 76 4 0 2930 3005 598160965 598160890 6.220000e-23 119
5 TraesCS2D01G352900 chr2B 93.316 1870 77 27 896 2755 531466276 531468107 0.000000e+00 2717
6 TraesCS2D01G352900 chr2B 91.589 856 27 18 6 822 531465389 531466238 0.000000e+00 1140
7 TraesCS2D01G352900 chr2B 92.784 194 9 2 3189 3378 531468234 531468426 3.480000e-70 276
8 TraesCS2D01G352900 chr6A 80.862 998 175 15 1380 2369 407085617 407086606 0.000000e+00 771
9 TraesCS2D01G352900 chr6A 82.877 146 18 4 948 1087 407085211 407085355 1.340000e-24 124
10 TraesCS2D01G352900 chr6D 80.120 996 186 11 1380 2369 285869734 285870723 0.000000e+00 732
11 TraesCS2D01G352900 chr6D 82.192 146 19 4 948 1087 285869329 285869473 6.220000e-23 119
12 TraesCS2D01G352900 chr5D 94.681 188 6 3 3003 3188 503323214 503323399 4.480000e-74 289
13 TraesCS2D01G352900 chr5D 94.149 188 7 3 3003 3188 6243571 6243386 2.080000e-72 283
14 TraesCS2D01G352900 chr3D 94.681 188 6 3 3003 3188 24156840 24157025 4.480000e-74 289
15 TraesCS2D01G352900 chr1D 94.681 188 6 3 3003 3188 254469128 254469313 4.480000e-74 289
16 TraesCS2D01G352900 chrUn 94.180 189 6 4 3003 3188 438112137 438111951 2.080000e-72 283
17 TraesCS2D01G352900 chrUn 94.180 189 6 4 3003 3188 465869893 465869707 2.080000e-72 283
18 TraesCS2D01G352900 chrUn 94.149 188 6 4 3003 3188 357608869 357608685 7.490000e-72 281
19 TraesCS2D01G352900 chr7B 94.180 189 6 4 3003 3188 662745320 662745134 2.080000e-72 283
20 TraesCS2D01G352900 chr4D 94.149 188 7 3 3003 3188 19910395 19910580 2.080000e-72 283
21 TraesCS2D01G352900 chr4A 100.000 152 0 0 2773 2924 119781313 119781162 7.490000e-72 281
22 TraesCS2D01G352900 chr6B 82.877 146 18 4 948 1087 446835883 446836027 1.340000e-24 124


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G352900 chr2D 451286450 451289993 3543 False 6545.000000 6545 100.0000 1 3544 1 chr2D.!!$F1 3543
1 TraesCS2D01G352900 chr2A 598160732 598163691 2959 True 1010.000000 2972 92.0470 11 3344 4 chr2A.!!$R1 3333
2 TraesCS2D01G352900 chr2B 531465389 531468426 3037 False 1377.666667 2717 92.5630 6 3378 3 chr2B.!!$F1 3372
3 TraesCS2D01G352900 chr6A 407085211 407086606 1395 False 447.500000 771 81.8695 948 2369 2 chr6A.!!$F1 1421
4 TraesCS2D01G352900 chr6D 285869329 285870723 1394 False 425.500000 732 81.1560 948 2369 2 chr6D.!!$F1 1421

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
531 551 0.321564 ATGTGCGCTAGTTTCTGCCA 60.322 50.0 9.73 0.0 0.0 4.92 F
877 923 0.324368 TCCGTCCCTGCTGTGACTAT 60.324 55.0 4.83 0.0 0.0 2.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2294 2436 1.142748 GCAGTCGTATGCCTCAGCT 59.857 57.895 3.64 0.0 40.43 4.24 R
2789 2950 0.249489 ATCGTCCAACAGCTATCGGC 60.249 55.000 0.00 0.0 42.19 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
263 264 2.903357 CCGCCACCACAGCTAGAT 59.097 61.111 0.00 0.00 0.00 1.98
432 442 1.217942 GGCCAACCCAGATAATTCCCT 59.782 52.381 0.00 0.00 0.00 4.20
477 497 7.732025 TCTCTTGTTTCTAGGTCATGTTGTTA 58.268 34.615 0.00 0.00 0.00 2.41
492 512 3.562141 TGTTGTTATGCGCTGTAGTTGTT 59.438 39.130 9.73 0.00 0.00 2.83
493 513 4.035792 TGTTGTTATGCGCTGTAGTTGTTT 59.964 37.500 9.73 0.00 0.00 2.83
529 549 3.309682 TGATTATGTGCGCTAGTTTCTGC 59.690 43.478 9.73 0.00 0.00 4.26
530 550 1.651987 TATGTGCGCTAGTTTCTGCC 58.348 50.000 9.73 0.00 0.00 4.85
531 551 0.321564 ATGTGCGCTAGTTTCTGCCA 60.322 50.000 9.73 0.00 0.00 4.92
582 608 5.604231 AGTTTGCATCTAGATCTGGGATGTA 59.396 40.000 26.56 23.08 39.04 2.29
586 612 5.105595 TGCATCTAGATCTGGGATGTATTCG 60.106 44.000 26.56 12.05 39.04 3.34
629 673 4.693566 TGGATTGCTCGTAGTTAGTTTTGG 59.306 41.667 0.00 0.00 0.00 3.28
726 770 7.364408 GGCTTATGGCATCATGGATGATTTTAT 60.364 37.037 1.65 0.00 45.23 1.40
798 842 3.746492 AGAGTCACAAAGTTTCATACGGC 59.254 43.478 0.00 0.00 0.00 5.68
822 868 5.040635 ACACATGTTCGTGGTTGAATTTTC 58.959 37.500 0.00 0.00 41.38 2.29
832 878 7.835822 TCGTGGTTGAATTTTCCAATATGATT 58.164 30.769 0.00 0.00 32.82 2.57
833 879 7.973388 TCGTGGTTGAATTTTCCAATATGATTC 59.027 33.333 0.00 0.00 32.82 2.52
834 880 7.975616 CGTGGTTGAATTTTCCAATATGATTCT 59.024 33.333 0.00 0.00 32.82 2.40
839 885 8.181904 TGAATTTTCCAATATGATTCTAGGCC 57.818 34.615 0.00 0.00 0.00 5.19
849 895 8.725148 CAATATGATTCTAGGCCTGTTATGTTC 58.275 37.037 17.99 3.77 0.00 3.18
850 896 5.957771 TGATTCTAGGCCTGTTATGTTCT 57.042 39.130 17.99 0.00 0.00 3.01
851 897 7.618019 ATGATTCTAGGCCTGTTATGTTCTA 57.382 36.000 17.99 0.00 0.00 2.10
854 900 5.854010 TCTAGGCCTGTTATGTTCTACAG 57.146 43.478 17.99 0.00 41.08 2.74
856 902 2.571653 AGGCCTGTTATGTTCTACAGCA 59.428 45.455 3.11 0.00 40.28 4.41
857 903 3.200825 AGGCCTGTTATGTTCTACAGCAT 59.799 43.478 3.11 0.00 40.28 3.79
858 904 3.947834 GGCCTGTTATGTTCTACAGCATT 59.052 43.478 0.00 0.00 40.28 3.56
859 905 4.035675 GGCCTGTTATGTTCTACAGCATTC 59.964 45.833 0.00 0.00 40.28 2.67
860 906 4.035675 GCCTGTTATGTTCTACAGCATTCC 59.964 45.833 0.00 0.00 40.28 3.01
861 907 4.271049 CCTGTTATGTTCTACAGCATTCCG 59.729 45.833 0.00 0.00 40.28 4.30
863 909 4.868171 TGTTATGTTCTACAGCATTCCGTC 59.132 41.667 0.00 0.00 0.00 4.79
864 910 2.380084 TGTTCTACAGCATTCCGTCC 57.620 50.000 0.00 0.00 0.00 4.79
865 911 1.066430 TGTTCTACAGCATTCCGTCCC 60.066 52.381 0.00 0.00 0.00 4.46
867 913 0.824109 TCTACAGCATTCCGTCCCTG 59.176 55.000 0.00 0.00 0.00 4.45
868 914 0.811616 CTACAGCATTCCGTCCCTGC 60.812 60.000 0.00 0.00 36.15 4.85
870 916 2.270205 AGCATTCCGTCCCTGCTG 59.730 61.111 0.00 0.00 44.21 4.41
871 917 2.045926 GCATTCCGTCCCTGCTGT 60.046 61.111 0.00 0.00 33.15 4.40
872 918 2.401766 GCATTCCGTCCCTGCTGTG 61.402 63.158 0.00 0.00 33.15 3.66
874 920 1.021390 CATTCCGTCCCTGCTGTGAC 61.021 60.000 0.00 0.00 0.00 3.67
875 921 1.194781 ATTCCGTCCCTGCTGTGACT 61.195 55.000 4.83 0.00 0.00 3.41
877 923 0.324368 TCCGTCCCTGCTGTGACTAT 60.324 55.000 4.83 0.00 0.00 2.12
880 926 2.223829 CCGTCCCTGCTGTGACTATTAG 60.224 54.545 4.83 0.00 0.00 1.73
884 930 5.293560 GTCCCTGCTGTGACTATTAGAATC 58.706 45.833 0.00 0.00 0.00 2.52
886 932 6.265649 GTCCCTGCTGTGACTATTAGAATCTA 59.734 42.308 0.00 0.00 0.00 1.98
887 933 7.013220 TCCCTGCTGTGACTATTAGAATCTAT 58.987 38.462 0.00 0.00 0.00 1.98
888 934 7.177568 TCCCTGCTGTGACTATTAGAATCTATC 59.822 40.741 0.00 0.00 0.00 2.08
889 935 7.319646 CCTGCTGTGACTATTAGAATCTATCC 58.680 42.308 0.00 0.00 0.00 2.59
890 936 7.039434 CCTGCTGTGACTATTAGAATCTATCCA 60.039 40.741 0.00 0.00 0.00 3.41
891 937 8.427902 TGCTGTGACTATTAGAATCTATCCAT 57.572 34.615 0.00 0.00 0.00 3.41
892 938 8.309656 TGCTGTGACTATTAGAATCTATCCATG 58.690 37.037 0.00 0.00 0.00 3.66
1092 1170 2.488937 TGCATACTCGAACGTAAGGACA 59.511 45.455 0.00 0.00 46.39 4.02
1094 1172 4.110482 GCATACTCGAACGTAAGGACAAT 58.890 43.478 0.00 0.00 46.39 2.71
1095 1173 4.565564 GCATACTCGAACGTAAGGACAATT 59.434 41.667 0.00 0.00 46.39 2.32
1097 1175 4.516365 ACTCGAACGTAAGGACAATTCT 57.484 40.909 0.00 0.00 46.39 2.40
1102 1180 5.176223 TCGAACGTAAGGACAATTCTCAAAC 59.824 40.000 0.00 0.00 46.39 2.93
1103 1181 5.050634 CGAACGTAAGGACAATTCTCAAACA 60.051 40.000 0.00 0.00 46.39 2.83
1121 1202 3.802948 ACACGAGTCTCACTTCTGTTT 57.197 42.857 0.00 0.00 0.00 2.83
1318 1459 7.171167 CGATAATCGACCAGTTCTCTAGTCTTA 59.829 40.741 0.00 0.00 43.74 2.10
1577 1719 3.566322 ACTCGTATGTGCTATCTGAGTCC 59.434 47.826 0.00 0.00 29.81 3.85
1592 1734 3.378512 TGAGTCCAGCCTGTTCATCTAT 58.621 45.455 0.00 0.00 0.00 1.98
2009 2151 2.106566 GAGATGACCAAGCTCTCTGGA 58.893 52.381 9.96 0.00 34.03 3.86
2021 2163 4.032310 AGCTCTCTGGAATCTCTGACATT 58.968 43.478 0.00 0.00 0.00 2.71
2513 2658 3.930012 CGGGCGGAGGAGGATTCC 61.930 72.222 0.00 0.00 44.39 3.01
2546 2699 1.499056 GGTGCTGTGCGAGTGATTG 59.501 57.895 0.00 0.00 0.00 2.67
2570 2724 2.022129 CGCTGTTCCGTCTGTGGAC 61.022 63.158 0.00 0.00 37.89 4.02
2583 2737 4.499188 CGTCTGTGGACTTTGTTCTGACTA 60.499 45.833 0.00 0.00 40.10 2.59
2629 2788 1.149174 GCTGGCCAGGCTATTGCTA 59.851 57.895 33.46 0.00 39.59 3.49
2633 2792 0.250510 GGCCAGGCTATTGCTACTCC 60.251 60.000 12.43 0.00 39.59 3.85
2695 2855 1.115467 ATGAGCGTACTTCTGGGGAG 58.885 55.000 0.00 0.00 0.00 4.30
2759 2920 7.757097 GACGAGTGTCACTTTGTTATCATAT 57.243 36.000 7.00 0.00 44.82 1.78
2760 2921 8.186178 GACGAGTGTCACTTTGTTATCATATT 57.814 34.615 7.00 0.00 44.82 1.28
2761 2922 8.186178 ACGAGTGTCACTTTGTTATCATATTC 57.814 34.615 7.00 0.00 0.00 1.75
2762 2923 7.817478 ACGAGTGTCACTTTGTTATCATATTCA 59.183 33.333 7.00 0.00 0.00 2.57
2763 2924 8.820933 CGAGTGTCACTTTGTTATCATATTCAT 58.179 33.333 7.00 0.00 0.00 2.57
2764 2925 9.926751 GAGTGTCACTTTGTTATCATATTCATG 57.073 33.333 7.00 0.00 0.00 3.07
2765 2926 9.453572 AGTGTCACTTTGTTATCATATTCATGT 57.546 29.630 0.00 0.00 33.57 3.21
2780 2941 9.599866 TCATATTCATGTTCTGTAATCGAAACT 57.400 29.630 0.00 0.00 33.57 2.66
2784 2945 8.827177 TTCATGTTCTGTAATCGAAACTACTT 57.173 30.769 0.00 0.00 0.00 2.24
2785 2946 8.462143 TCATGTTCTGTAATCGAAACTACTTC 57.538 34.615 0.00 0.00 0.00 3.01
2786 2947 8.085909 TCATGTTCTGTAATCGAAACTACTTCA 58.914 33.333 0.00 0.00 33.17 3.02
2787 2948 7.633361 TGTTCTGTAATCGAAACTACTTCAC 57.367 36.000 0.00 0.00 33.17 3.18
2788 2949 7.204604 TGTTCTGTAATCGAAACTACTTCACA 58.795 34.615 0.00 0.00 33.17 3.58
2789 2950 7.381408 TGTTCTGTAATCGAAACTACTTCACAG 59.619 37.037 0.00 0.00 33.17 3.66
2790 2951 5.862323 TCTGTAATCGAAACTACTTCACAGC 59.138 40.000 0.00 0.00 33.17 4.40
2791 2952 4.927425 TGTAATCGAAACTACTTCACAGCC 59.073 41.667 0.00 0.00 33.17 4.85
2792 2953 2.060326 TCGAAACTACTTCACAGCCG 57.940 50.000 0.00 0.00 33.17 5.52
2793 2954 1.610038 TCGAAACTACTTCACAGCCGA 59.390 47.619 0.00 0.00 33.17 5.54
2794 2955 2.230508 TCGAAACTACTTCACAGCCGAT 59.769 45.455 0.00 0.00 33.17 4.18
2795 2956 3.441222 TCGAAACTACTTCACAGCCGATA 59.559 43.478 0.00 0.00 33.17 2.92
2796 2957 3.791887 CGAAACTACTTCACAGCCGATAG 59.208 47.826 0.00 0.00 33.17 2.08
2797 2958 2.873133 ACTACTTCACAGCCGATAGC 57.127 50.000 0.00 0.00 44.25 2.97
2798 2959 4.678309 GAAACTACTTCACAGCCGATAGCT 60.678 45.833 0.00 0.00 42.90 3.32
2806 2967 3.706140 GCCGATAGCTGTTGGACG 58.294 61.111 20.47 1.54 38.99 4.79
2807 2968 1.141019 GCCGATAGCTGTTGGACGA 59.859 57.895 20.47 0.00 38.99 4.20
2808 2969 0.249489 GCCGATAGCTGTTGGACGAT 60.249 55.000 20.47 0.00 38.99 3.73
2809 2970 1.806623 GCCGATAGCTGTTGGACGATT 60.807 52.381 20.47 0.00 38.99 3.34
2810 2971 2.128035 CCGATAGCTGTTGGACGATTC 58.872 52.381 11.30 0.00 0.00 2.52
2811 2972 2.481276 CCGATAGCTGTTGGACGATTCA 60.481 50.000 11.30 0.00 0.00 2.57
2812 2973 3.186909 CGATAGCTGTTGGACGATTCAA 58.813 45.455 0.00 0.00 0.00 2.69
2813 2974 3.243877 CGATAGCTGTTGGACGATTCAAG 59.756 47.826 0.00 0.00 0.00 3.02
2814 2975 1.160137 AGCTGTTGGACGATTCAAGC 58.840 50.000 0.00 0.00 0.00 4.01
2815 2976 0.874390 GCTGTTGGACGATTCAAGCA 59.126 50.000 0.00 0.00 0.00 3.91
2816 2977 1.400242 GCTGTTGGACGATTCAAGCAC 60.400 52.381 0.00 0.00 0.00 4.40
2817 2978 0.865111 TGTTGGACGATTCAAGCACG 59.135 50.000 0.00 0.00 0.00 5.34
2818 2979 1.144969 GTTGGACGATTCAAGCACGA 58.855 50.000 0.00 0.00 0.00 4.35
2819 2980 1.732259 GTTGGACGATTCAAGCACGAT 59.268 47.619 0.00 0.00 0.00 3.73
2820 2981 2.093306 TGGACGATTCAAGCACGATT 57.907 45.000 0.00 0.00 0.00 3.34
2821 2982 1.999735 TGGACGATTCAAGCACGATTC 59.000 47.619 0.00 0.00 0.00 2.52
2822 2983 2.271800 GGACGATTCAAGCACGATTCT 58.728 47.619 0.00 0.00 0.00 2.40
2823 2984 2.673368 GGACGATTCAAGCACGATTCTT 59.327 45.455 0.00 0.00 0.00 2.52
2824 2985 3.863424 GGACGATTCAAGCACGATTCTTA 59.137 43.478 0.00 0.00 0.00 2.10
2825 2986 4.328983 GGACGATTCAAGCACGATTCTTAA 59.671 41.667 0.00 0.00 0.00 1.85
2826 2987 5.006746 GGACGATTCAAGCACGATTCTTAAT 59.993 40.000 0.00 0.00 0.00 1.40
2827 2988 6.037423 ACGATTCAAGCACGATTCTTAATC 57.963 37.500 0.00 0.00 34.52 1.75
2828 2989 5.812642 ACGATTCAAGCACGATTCTTAATCT 59.187 36.000 0.00 0.00 35.73 2.40
2829 2990 6.978659 ACGATTCAAGCACGATTCTTAATCTA 59.021 34.615 0.00 0.00 35.73 1.98
2830 2991 7.168302 ACGATTCAAGCACGATTCTTAATCTAG 59.832 37.037 0.00 0.00 35.73 2.43
2831 2992 7.168302 CGATTCAAGCACGATTCTTAATCTAGT 59.832 37.037 0.00 0.00 35.73 2.57
2832 2993 7.525688 TTCAAGCACGATTCTTAATCTAGTG 57.474 36.000 0.00 0.00 35.73 2.74
2833 2994 6.042777 TCAAGCACGATTCTTAATCTAGTGG 58.957 40.000 0.00 0.00 35.73 4.00
2834 2995 4.372656 AGCACGATTCTTAATCTAGTGGC 58.627 43.478 0.00 0.00 35.73 5.01
2835 2996 4.100189 AGCACGATTCTTAATCTAGTGGCT 59.900 41.667 0.00 0.00 35.73 4.75
2836 2997 4.210120 GCACGATTCTTAATCTAGTGGCTG 59.790 45.833 0.00 0.00 35.73 4.85
2837 2998 5.352284 CACGATTCTTAATCTAGTGGCTGT 58.648 41.667 0.00 0.00 35.73 4.40
2838 2999 5.233050 CACGATTCTTAATCTAGTGGCTGTG 59.767 44.000 0.00 0.00 35.73 3.66
2839 3000 5.105310 ACGATTCTTAATCTAGTGGCTGTGT 60.105 40.000 0.00 0.00 35.73 3.72
2840 3001 5.812642 CGATTCTTAATCTAGTGGCTGTGTT 59.187 40.000 0.00 0.00 35.73 3.32
2841 3002 6.237942 CGATTCTTAATCTAGTGGCTGTGTTG 60.238 42.308 0.00 0.00 35.73 3.33
2842 3003 4.253685 TCTTAATCTAGTGGCTGTGTTGC 58.746 43.478 0.00 0.00 0.00 4.17
2843 3004 2.566833 AATCTAGTGGCTGTGTTGCA 57.433 45.000 0.00 0.00 34.04 4.08
2844 3005 1.813513 ATCTAGTGGCTGTGTTGCAC 58.186 50.000 0.00 0.00 34.56 4.57
2845 3006 0.250295 TCTAGTGGCTGTGTTGCACC 60.250 55.000 0.00 0.00 32.73 5.01
2846 3007 0.250467 CTAGTGGCTGTGTTGCACCT 60.250 55.000 0.00 0.00 32.73 4.00
2847 3008 1.001974 CTAGTGGCTGTGTTGCACCTA 59.998 52.381 0.00 0.00 32.73 3.08
2848 3009 0.250467 AGTGGCTGTGTTGCACCTAG 60.250 55.000 0.00 0.00 32.73 3.02
2849 3010 0.535102 GTGGCTGTGTTGCACCTAGT 60.535 55.000 0.00 0.00 32.73 2.57
2850 3011 1.052617 TGGCTGTGTTGCACCTAGTA 58.947 50.000 0.00 0.00 32.73 1.82
2851 3012 1.270625 TGGCTGTGTTGCACCTAGTAC 60.271 52.381 0.00 0.00 32.73 2.73
2852 3013 1.002087 GGCTGTGTTGCACCTAGTACT 59.998 52.381 0.00 0.00 32.73 2.73
2853 3014 2.232941 GGCTGTGTTGCACCTAGTACTA 59.767 50.000 1.89 1.89 32.73 1.82
2854 3015 3.512680 GCTGTGTTGCACCTAGTACTAG 58.487 50.000 21.11 21.11 32.73 2.57
2866 3027 3.946558 CCTAGTACTAGGTATCGATGGCC 59.053 52.174 32.81 10.34 45.93 5.36
2867 3028 3.810721 AGTACTAGGTATCGATGGCCT 57.189 47.619 21.63 21.63 36.47 5.19
2868 3029 3.422796 AGTACTAGGTATCGATGGCCTG 58.577 50.000 24.69 18.48 34.07 4.85
2869 3030 2.677542 ACTAGGTATCGATGGCCTGA 57.322 50.000 24.69 12.95 34.07 3.86
2870 3031 2.958818 ACTAGGTATCGATGGCCTGAA 58.041 47.619 24.69 11.34 34.07 3.02
2871 3032 3.511477 ACTAGGTATCGATGGCCTGAAT 58.489 45.455 24.69 12.51 34.07 2.57
2872 3033 3.904339 ACTAGGTATCGATGGCCTGAATT 59.096 43.478 24.69 8.45 34.07 2.17
2873 3034 3.131709 AGGTATCGATGGCCTGAATTG 57.868 47.619 18.65 0.00 0.00 2.32
2874 3035 1.537202 GGTATCGATGGCCTGAATTGC 59.463 52.381 8.54 0.00 0.00 3.56
2875 3036 2.221169 GTATCGATGGCCTGAATTGCA 58.779 47.619 8.54 0.00 0.00 4.08
2876 3037 1.315690 ATCGATGGCCTGAATTGCAG 58.684 50.000 3.32 0.00 44.49 4.41
2877 3038 0.035152 TCGATGGCCTGAATTGCAGT 60.035 50.000 3.32 0.00 43.33 4.40
2878 3039 1.209261 TCGATGGCCTGAATTGCAGTA 59.791 47.619 3.32 0.00 43.33 2.74
2879 3040 2.158769 TCGATGGCCTGAATTGCAGTAT 60.159 45.455 3.32 0.00 43.33 2.12
2880 3041 2.225019 CGATGGCCTGAATTGCAGTATC 59.775 50.000 3.32 0.00 43.33 2.24
2881 3042 1.667236 TGGCCTGAATTGCAGTATCG 58.333 50.000 3.32 0.00 43.33 2.92
2882 3043 1.065491 TGGCCTGAATTGCAGTATCGT 60.065 47.619 3.32 0.00 43.33 3.73
2883 3044 1.599542 GGCCTGAATTGCAGTATCGTC 59.400 52.381 0.00 0.00 43.33 4.20
2884 3045 1.599542 GCCTGAATTGCAGTATCGTCC 59.400 52.381 0.00 0.00 43.33 4.79
2885 3046 2.905075 CCTGAATTGCAGTATCGTCCA 58.095 47.619 0.00 0.00 43.33 4.02
2886 3047 3.270027 CCTGAATTGCAGTATCGTCCAA 58.730 45.455 0.00 0.00 43.33 3.53
2887 3048 3.063997 CCTGAATTGCAGTATCGTCCAAC 59.936 47.826 0.00 0.00 43.33 3.77
2888 3049 3.669536 TGAATTGCAGTATCGTCCAACA 58.330 40.909 0.00 0.00 0.00 3.33
2889 3050 4.068599 TGAATTGCAGTATCGTCCAACAA 58.931 39.130 0.00 0.00 0.00 2.83
2890 3051 4.699735 TGAATTGCAGTATCGTCCAACAAT 59.300 37.500 0.00 0.00 0.00 2.71
2891 3052 4.882671 ATTGCAGTATCGTCCAACAATC 57.117 40.909 0.00 0.00 0.00 2.67
2892 3053 2.267426 TGCAGTATCGTCCAACAATCG 58.733 47.619 0.00 0.00 0.00 3.34
2893 3054 1.593006 GCAGTATCGTCCAACAATCGG 59.407 52.381 0.00 0.00 0.00 4.18
2894 3055 1.593006 CAGTATCGTCCAACAATCGGC 59.407 52.381 0.00 0.00 0.00 5.54
2895 3056 1.480954 AGTATCGTCCAACAATCGGCT 59.519 47.619 0.00 0.00 0.00 5.52
2896 3057 1.593006 GTATCGTCCAACAATCGGCTG 59.407 52.381 0.00 0.00 0.00 4.85
2897 3058 0.744414 ATCGTCCAACAATCGGCTGG 60.744 55.000 0.00 0.00 0.00 4.85
2898 3059 1.375396 CGTCCAACAATCGGCTGGA 60.375 57.895 0.00 0.00 36.89 3.86
2899 3060 0.953471 CGTCCAACAATCGGCTGGAA 60.953 55.000 0.00 0.00 40.87 3.53
2900 3061 0.521735 GTCCAACAATCGGCTGGAAC 59.478 55.000 0.00 0.00 40.87 3.62
2901 3062 0.109532 TCCAACAATCGGCTGGAACA 59.890 50.000 0.00 0.00 36.30 3.18
2902 3063 1.176527 CCAACAATCGGCTGGAACAT 58.823 50.000 0.00 0.00 38.20 2.71
2903 3064 1.135315 CCAACAATCGGCTGGAACATG 60.135 52.381 0.00 0.00 38.20 3.21
2904 3065 1.541147 CAACAATCGGCTGGAACATGT 59.459 47.619 0.00 0.00 38.20 3.21
2905 3066 1.453155 ACAATCGGCTGGAACATGTC 58.547 50.000 0.00 0.00 38.20 3.06
2906 3067 0.374758 CAATCGGCTGGAACATGTCG 59.625 55.000 0.00 0.00 38.20 4.35
2907 3068 0.036388 AATCGGCTGGAACATGTCGT 60.036 50.000 0.00 0.00 38.20 4.34
2908 3069 0.740868 ATCGGCTGGAACATGTCGTG 60.741 55.000 0.00 0.00 38.20 4.35
2909 3070 1.667830 CGGCTGGAACATGTCGTGT 60.668 57.895 0.00 0.00 44.84 4.49
2910 3071 1.868997 GGCTGGAACATGTCGTGTG 59.131 57.895 0.00 0.00 41.14 3.82
2911 3072 1.207593 GCTGGAACATGTCGTGTGC 59.792 57.895 0.00 0.00 41.14 4.57
2912 3073 1.506309 GCTGGAACATGTCGTGTGCA 61.506 55.000 0.00 0.00 41.14 4.57
2913 3074 1.159285 CTGGAACATGTCGTGTGCAT 58.841 50.000 0.00 0.00 41.14 3.96
2914 3075 2.345876 CTGGAACATGTCGTGTGCATA 58.654 47.619 0.00 0.00 41.14 3.14
2915 3076 2.345876 TGGAACATGTCGTGTGCATAG 58.654 47.619 0.00 0.00 41.14 2.23
2916 3077 1.062587 GGAACATGTCGTGTGCATAGC 59.937 52.381 0.00 0.00 41.14 2.97
2917 3078 1.731709 GAACATGTCGTGTGCATAGCA 59.268 47.619 0.00 0.00 41.14 3.49
2918 3079 1.362768 ACATGTCGTGTGCATAGCAG 58.637 50.000 0.00 0.00 40.08 4.24
2919 3080 0.027194 CATGTCGTGTGCATAGCAGC 59.973 55.000 0.00 0.00 40.08 5.25
2920 3081 0.391528 ATGTCGTGTGCATAGCAGCA 60.392 50.000 0.00 0.00 40.08 4.41
2928 3089 2.019948 TGCATAGCAGCACTCTTCTG 57.980 50.000 0.00 0.00 40.11 3.02
2934 3095 5.503683 GCATAGCAGCACTCTTCTGTAATTG 60.504 44.000 0.00 0.00 34.21 2.32
2969 3201 2.478370 CCAAGTTGCAGTGTGTTGACAG 60.478 50.000 0.00 0.00 30.74 3.51
2981 3235 0.238289 GTTGACAGGCGACCAATGTG 59.762 55.000 0.00 0.00 0.00 3.21
2984 3238 1.639298 GACAGGCGACCAATGTGCTC 61.639 60.000 0.00 0.00 0.00 4.26
2985 3239 1.672030 CAGGCGACCAATGTGCTCA 60.672 57.895 0.00 0.00 0.00 4.26
2986 3240 1.028330 CAGGCGACCAATGTGCTCAT 61.028 55.000 0.00 0.00 35.59 2.90
2987 3241 0.322816 AGGCGACCAATGTGCTCATT 60.323 50.000 8.17 8.17 44.02 2.57
2988 3242 0.527565 GGCGACCAATGTGCTCATTT 59.472 50.000 11.19 0.00 41.66 2.32
2989 3243 1.468054 GGCGACCAATGTGCTCATTTC 60.468 52.381 11.19 7.10 41.66 2.17
2990 3244 1.468054 GCGACCAATGTGCTCATTTCC 60.468 52.381 11.19 3.53 41.66 3.13
2991 3245 1.133025 CGACCAATGTGCTCATTTCCC 59.867 52.381 11.19 3.22 41.66 3.97
2992 3246 1.478105 GACCAATGTGCTCATTTCCCC 59.522 52.381 11.19 0.00 41.66 4.81
2993 3247 1.077663 ACCAATGTGCTCATTTCCCCT 59.922 47.619 11.19 0.00 41.66 4.79
2994 3248 1.753073 CCAATGTGCTCATTTCCCCTC 59.247 52.381 11.19 0.00 41.66 4.30
2995 3249 1.402968 CAATGTGCTCATTTCCCCTCG 59.597 52.381 11.19 0.00 41.66 4.63
2996 3250 0.749454 ATGTGCTCATTTCCCCTCGC 60.749 55.000 0.00 0.00 0.00 5.03
2997 3251 2.115291 GTGCTCATTTCCCCTCGCC 61.115 63.158 0.00 0.00 0.00 5.54
2998 3252 2.300967 TGCTCATTTCCCCTCGCCT 61.301 57.895 0.00 0.00 0.00 5.52
2999 3253 0.980754 TGCTCATTTCCCCTCGCCTA 60.981 55.000 0.00 0.00 0.00 3.93
3000 3254 0.398318 GCTCATTTCCCCTCGCCTAT 59.602 55.000 0.00 0.00 0.00 2.57
3001 3255 1.609320 GCTCATTTCCCCTCGCCTATC 60.609 57.143 0.00 0.00 0.00 2.08
3002 3256 1.974236 CTCATTTCCCCTCGCCTATCT 59.026 52.381 0.00 0.00 0.00 1.98
3003 3257 2.370189 CTCATTTCCCCTCGCCTATCTT 59.630 50.000 0.00 0.00 0.00 2.40
3004 3258 2.368875 TCATTTCCCCTCGCCTATCTTC 59.631 50.000 0.00 0.00 0.00 2.87
3005 3259 1.129058 TTTCCCCTCGCCTATCTTCC 58.871 55.000 0.00 0.00 0.00 3.46
3006 3260 0.264955 TTCCCCTCGCCTATCTTCCT 59.735 55.000 0.00 0.00 0.00 3.36
3007 3261 1.155323 TCCCCTCGCCTATCTTCCTA 58.845 55.000 0.00 0.00 0.00 2.94
3008 3262 1.203025 TCCCCTCGCCTATCTTCCTAC 60.203 57.143 0.00 0.00 0.00 3.18
3009 3263 1.258676 CCCTCGCCTATCTTCCTACC 58.741 60.000 0.00 0.00 0.00 3.18
3010 3264 1.203075 CCCTCGCCTATCTTCCTACCT 60.203 57.143 0.00 0.00 0.00 3.08
3011 3265 2.164338 CCTCGCCTATCTTCCTACCTC 58.836 57.143 0.00 0.00 0.00 3.85
3012 3266 2.489255 CCTCGCCTATCTTCCTACCTCA 60.489 54.545 0.00 0.00 0.00 3.86
3013 3267 3.426615 CTCGCCTATCTTCCTACCTCAT 58.573 50.000 0.00 0.00 0.00 2.90
3014 3268 4.567958 CCTCGCCTATCTTCCTACCTCATA 60.568 50.000 0.00 0.00 0.00 2.15
3015 3269 4.333690 TCGCCTATCTTCCTACCTCATAC 58.666 47.826 0.00 0.00 0.00 2.39
3016 3270 3.127203 CGCCTATCTTCCTACCTCATACG 59.873 52.174 0.00 0.00 0.00 3.06
3017 3271 3.444388 GCCTATCTTCCTACCTCATACGG 59.556 52.174 0.00 0.00 0.00 4.02
3018 3272 3.444388 CCTATCTTCCTACCTCATACGGC 59.556 52.174 0.00 0.00 0.00 5.68
3019 3273 2.750141 TCTTCCTACCTCATACGGCT 57.250 50.000 0.00 0.00 0.00 5.52
3020 3274 2.584236 TCTTCCTACCTCATACGGCTC 58.416 52.381 0.00 0.00 0.00 4.70
3021 3275 2.092049 TCTTCCTACCTCATACGGCTCA 60.092 50.000 0.00 0.00 0.00 4.26
3022 3276 1.982660 TCCTACCTCATACGGCTCAG 58.017 55.000 0.00 0.00 0.00 3.35
3023 3277 1.493446 TCCTACCTCATACGGCTCAGA 59.507 52.381 0.00 0.00 0.00 3.27
3024 3278 2.092049 TCCTACCTCATACGGCTCAGAA 60.092 50.000 0.00 0.00 0.00 3.02
3025 3279 2.693591 CCTACCTCATACGGCTCAGAAA 59.306 50.000 0.00 0.00 0.00 2.52
3026 3280 3.322254 CCTACCTCATACGGCTCAGAAAT 59.678 47.826 0.00 0.00 0.00 2.17
3027 3281 3.914426 ACCTCATACGGCTCAGAAATT 57.086 42.857 0.00 0.00 0.00 1.82
3028 3282 3.535561 ACCTCATACGGCTCAGAAATTG 58.464 45.455 0.00 0.00 0.00 2.32
3029 3283 2.289002 CCTCATACGGCTCAGAAATTGC 59.711 50.000 0.00 0.00 0.00 3.56
3030 3284 3.201290 CTCATACGGCTCAGAAATTGCT 58.799 45.455 0.00 0.00 0.00 3.91
3031 3285 4.371786 CTCATACGGCTCAGAAATTGCTA 58.628 43.478 0.00 0.00 0.00 3.49
3032 3286 4.960938 TCATACGGCTCAGAAATTGCTAT 58.039 39.130 0.00 0.00 0.00 2.97
3033 3287 6.096673 TCATACGGCTCAGAAATTGCTATA 57.903 37.500 0.00 0.00 0.00 1.31
3034 3288 6.701340 TCATACGGCTCAGAAATTGCTATAT 58.299 36.000 0.00 0.00 0.00 0.86
3035 3289 6.591448 TCATACGGCTCAGAAATTGCTATATG 59.409 38.462 0.00 0.00 0.00 1.78
3036 3290 4.960938 ACGGCTCAGAAATTGCTATATGA 58.039 39.130 0.00 0.00 0.00 2.15
3037 3291 5.368145 ACGGCTCAGAAATTGCTATATGAA 58.632 37.500 0.00 0.00 0.00 2.57
3038 3292 6.000219 ACGGCTCAGAAATTGCTATATGAAT 59.000 36.000 0.00 0.00 0.00 2.57
3039 3293 6.488006 ACGGCTCAGAAATTGCTATATGAATT 59.512 34.615 0.00 0.00 0.00 2.17
3040 3294 7.013655 ACGGCTCAGAAATTGCTATATGAATTT 59.986 33.333 0.00 0.00 35.06 1.82
3041 3295 7.536622 CGGCTCAGAAATTGCTATATGAATTTC 59.463 37.037 15.36 15.36 43.99 2.17
3042 3296 7.811713 GGCTCAGAAATTGCTATATGAATTTCC 59.188 37.037 17.63 8.68 44.42 3.13
3043 3297 7.811713 GCTCAGAAATTGCTATATGAATTTCCC 59.188 37.037 17.63 7.62 44.42 3.97
3044 3298 8.181904 TCAGAAATTGCTATATGAATTTCCCC 57.818 34.615 17.63 3.80 44.42 4.81
3045 3299 7.233348 TCAGAAATTGCTATATGAATTTCCCCC 59.767 37.037 17.63 3.57 44.42 5.40
3046 3300 7.234166 CAGAAATTGCTATATGAATTTCCCCCT 59.766 37.037 17.63 5.24 44.42 4.79
3047 3301 8.456124 AGAAATTGCTATATGAATTTCCCCCTA 58.544 33.333 17.63 0.00 44.42 3.53
3048 3302 9.259832 GAAATTGCTATATGAATTTCCCCCTAT 57.740 33.333 13.56 0.00 40.43 2.57
3049 3303 8.829373 AATTGCTATATGAATTTCCCCCTATC 57.171 34.615 0.00 0.00 0.00 2.08
3050 3304 7.588866 TTGCTATATGAATTTCCCCCTATCT 57.411 36.000 0.00 0.00 0.00 1.98
3051 3305 7.588866 TGCTATATGAATTTCCCCCTATCTT 57.411 36.000 0.00 0.00 0.00 2.40
3052 3306 8.694171 TGCTATATGAATTTCCCCCTATCTTA 57.306 34.615 0.00 0.00 0.00 2.10
3053 3307 9.122954 TGCTATATGAATTTCCCCCTATCTTAA 57.877 33.333 0.00 0.00 0.00 1.85
3054 3308 9.397280 GCTATATGAATTTCCCCCTATCTTAAC 57.603 37.037 0.00 0.00 0.00 2.01
3057 3311 6.901615 TGAATTTCCCCCTATCTTAACTGA 57.098 37.500 0.00 0.00 0.00 3.41
3058 3312 7.278724 TGAATTTCCCCCTATCTTAACTGAA 57.721 36.000 0.00 0.00 0.00 3.02
3059 3313 7.882755 TGAATTTCCCCCTATCTTAACTGAAT 58.117 34.615 0.00 0.00 0.00 2.57
3060 3314 8.343787 TGAATTTCCCCCTATCTTAACTGAATT 58.656 33.333 0.00 0.00 0.00 2.17
3061 3315 9.201989 GAATTTCCCCCTATCTTAACTGAATTT 57.798 33.333 0.00 0.00 0.00 1.82
3062 3316 7.954666 TTTCCCCCTATCTTAACTGAATTTG 57.045 36.000 0.00 0.00 0.00 2.32
3063 3317 6.901615 TCCCCCTATCTTAACTGAATTTGA 57.098 37.500 0.00 0.00 0.00 2.69
3064 3318 7.465900 TCCCCCTATCTTAACTGAATTTGAT 57.534 36.000 0.00 0.00 0.00 2.57
3065 3319 7.882755 TCCCCCTATCTTAACTGAATTTGATT 58.117 34.615 0.00 0.00 0.00 2.57
3066 3320 8.343787 TCCCCCTATCTTAACTGAATTTGATTT 58.656 33.333 0.00 0.00 0.00 2.17
3067 3321 9.640952 CCCCCTATCTTAACTGAATTTGATTTA 57.359 33.333 0.00 0.00 0.00 1.40
3096 3350 6.438186 AATTGATCCAATTTGTTCTTGGGT 57.562 33.333 2.48 0.00 40.60 4.51
3097 3351 5.885449 TTGATCCAATTTGTTCTTGGGTT 57.115 34.783 2.48 0.00 42.83 4.11
3098 3352 6.985653 TTGATCCAATTTGTTCTTGGGTTA 57.014 33.333 2.48 0.00 42.83 2.85
3099 3353 6.985653 TGATCCAATTTGTTCTTGGGTTAA 57.014 33.333 2.48 0.00 42.83 2.01
3100 3354 6.991938 TGATCCAATTTGTTCTTGGGTTAAG 58.008 36.000 2.48 0.00 42.83 1.85
3101 3355 5.208463 TCCAATTTGTTCTTGGGTTAAGC 57.792 39.130 0.00 0.00 42.83 3.09
3102 3356 4.651503 TCCAATTTGTTCTTGGGTTAAGCA 59.348 37.500 7.03 0.00 42.83 3.91
3103 3357 4.990426 CCAATTTGTTCTTGGGTTAAGCAG 59.010 41.667 7.03 0.00 39.62 4.24
3104 3358 5.221422 CCAATTTGTTCTTGGGTTAAGCAGA 60.221 40.000 7.03 0.00 39.62 4.26
3105 3359 6.279882 CAATTTGTTCTTGGGTTAAGCAGAA 58.720 36.000 7.03 5.26 36.31 3.02
3106 3360 5.514274 TTTGTTCTTGGGTTAAGCAGAAG 57.486 39.130 7.03 7.97 36.31 2.85
3107 3361 4.431416 TGTTCTTGGGTTAAGCAGAAGA 57.569 40.909 7.03 10.08 36.31 2.87
3108 3362 4.787551 TGTTCTTGGGTTAAGCAGAAGAA 58.212 39.130 19.39 19.39 36.31 2.52
3109 3363 5.197451 TGTTCTTGGGTTAAGCAGAAGAAA 58.803 37.500 22.57 14.72 35.12 2.52
3110 3364 5.833131 TGTTCTTGGGTTAAGCAGAAGAAAT 59.167 36.000 22.57 0.00 35.12 2.17
3111 3365 6.323739 TGTTCTTGGGTTAAGCAGAAGAAATT 59.676 34.615 22.57 0.00 35.12 1.82
3112 3366 7.504238 TGTTCTTGGGTTAAGCAGAAGAAATTA 59.496 33.333 22.57 14.27 35.12 1.40
3113 3367 8.357402 GTTCTTGGGTTAAGCAGAAGAAATTAA 58.643 33.333 22.57 7.39 35.12 1.40
3114 3368 8.650143 TCTTGGGTTAAGCAGAAGAAATTAAT 57.350 30.769 13.19 0.00 36.31 1.40
3115 3369 9.088987 TCTTGGGTTAAGCAGAAGAAATTAATT 57.911 29.630 13.19 0.00 36.31 1.40
3185 3439 5.789643 TTTTCCCACCTTGAAGAATGAAG 57.210 39.130 0.00 0.00 0.00 3.02
3186 3440 2.795329 TCCCACCTTGAAGAATGAAGC 58.205 47.619 0.00 0.00 0.00 3.86
3187 3441 2.108075 TCCCACCTTGAAGAATGAAGCA 59.892 45.455 0.00 0.00 0.00 3.91
3222 3476 1.732405 GCAGGAATAAACAACTGCGCC 60.732 52.381 4.18 0.00 45.56 6.53
3233 3487 1.296056 AACTGCGCCGTGGAATACAC 61.296 55.000 4.86 0.00 46.78 2.90
3265 3520 7.935338 TCATTCTTTTGTTTGATTGAAGAGC 57.065 32.000 0.00 0.00 0.00 4.09
3305 3560 6.918067 TCCTTATCTTCTGTGTTTCTGAGA 57.082 37.500 0.00 0.00 0.00 3.27
3378 3637 2.415893 CGGTGCCTCAACAATTCATTCC 60.416 50.000 0.00 0.00 0.00 3.01
3379 3638 2.415893 GGTGCCTCAACAATTCATTCCG 60.416 50.000 0.00 0.00 0.00 4.30
3380 3639 1.818060 TGCCTCAACAATTCATTCCGG 59.182 47.619 0.00 0.00 0.00 5.14
3381 3640 1.469767 GCCTCAACAATTCATTCCGGC 60.470 52.381 0.00 0.00 0.00 6.13
3382 3641 2.094675 CCTCAACAATTCATTCCGGCT 58.905 47.619 0.00 0.00 0.00 5.52
3383 3642 2.159338 CCTCAACAATTCATTCCGGCTG 60.159 50.000 0.00 0.00 0.00 4.85
3384 3643 1.202114 TCAACAATTCATTCCGGCTGC 59.798 47.619 0.00 0.00 0.00 5.25
3385 3644 1.067706 CAACAATTCATTCCGGCTGCA 60.068 47.619 0.50 0.00 0.00 4.41
3386 3645 1.477553 ACAATTCATTCCGGCTGCAT 58.522 45.000 0.50 0.00 0.00 3.96
3387 3646 1.826720 ACAATTCATTCCGGCTGCATT 59.173 42.857 0.50 0.00 0.00 3.56
3388 3647 2.234414 ACAATTCATTCCGGCTGCATTT 59.766 40.909 0.50 0.00 0.00 2.32
3389 3648 3.264104 CAATTCATTCCGGCTGCATTTT 58.736 40.909 0.50 0.00 0.00 1.82
3390 3649 2.652941 TTCATTCCGGCTGCATTTTC 57.347 45.000 0.50 0.00 0.00 2.29
3391 3650 0.817013 TCATTCCGGCTGCATTTTCC 59.183 50.000 0.50 0.00 0.00 3.13
3392 3651 0.531657 CATTCCGGCTGCATTTTCCA 59.468 50.000 0.50 0.00 0.00 3.53
3393 3652 1.067000 CATTCCGGCTGCATTTTCCAA 60.067 47.619 0.50 0.00 0.00 3.53
3394 3653 0.316841 TTCCGGCTGCATTTTCCAAC 59.683 50.000 0.50 0.00 0.00 3.77
3395 3654 0.539438 TCCGGCTGCATTTTCCAACT 60.539 50.000 0.50 0.00 0.00 3.16
3396 3655 0.388907 CCGGCTGCATTTTCCAACTG 60.389 55.000 0.50 0.00 0.00 3.16
3397 3656 0.597568 CGGCTGCATTTTCCAACTGA 59.402 50.000 0.50 0.00 0.00 3.41
3398 3657 1.000385 CGGCTGCATTTTCCAACTGAA 60.000 47.619 0.50 0.00 0.00 3.02
3399 3658 2.545532 CGGCTGCATTTTCCAACTGAAA 60.546 45.455 0.50 0.00 41.18 2.69
3400 3659 3.667360 GGCTGCATTTTCCAACTGAAAT 58.333 40.909 0.50 0.00 42.38 2.17
3401 3660 3.434299 GGCTGCATTTTCCAACTGAAATG 59.566 43.478 0.50 4.84 42.38 2.32
3402 3661 3.434299 GCTGCATTTTCCAACTGAAATGG 59.566 43.478 9.90 0.00 42.38 3.16
3403 3662 4.800249 GCTGCATTTTCCAACTGAAATGGA 60.800 41.667 9.90 6.83 45.09 3.41
3409 3668 2.238521 TCCAACTGAAATGGAAGGTGC 58.761 47.619 0.00 0.00 43.84 5.01
3410 3669 1.273327 CCAACTGAAATGGAAGGTGCC 59.727 52.381 0.00 0.00 40.56 5.01
3411 3670 1.962807 CAACTGAAATGGAAGGTGCCA 59.037 47.619 0.00 0.00 43.23 4.92
3412 3671 1.915141 ACTGAAATGGAAGGTGCCAG 58.085 50.000 0.00 0.00 42.15 4.85
3413 3672 1.145738 ACTGAAATGGAAGGTGCCAGT 59.854 47.619 0.00 0.00 42.15 4.00
3414 3673 1.542915 CTGAAATGGAAGGTGCCAGTG 59.457 52.381 0.00 0.00 42.15 3.66
3415 3674 0.244721 GAAATGGAAGGTGCCAGTGC 59.755 55.000 0.00 0.00 42.15 4.40
3416 3675 1.187567 AAATGGAAGGTGCCAGTGCC 61.188 55.000 0.00 0.00 42.15 5.01
3417 3676 3.925630 ATGGAAGGTGCCAGTGCCG 62.926 63.158 0.00 0.00 42.15 5.69
3431 3690 4.148825 GCCGGCCTCGTGAGTCAT 62.149 66.667 18.11 0.00 33.95 3.06
3432 3691 2.579201 CCGGCCTCGTGAGTCATT 59.421 61.111 0.00 0.00 33.95 2.57
3433 3692 1.519455 CCGGCCTCGTGAGTCATTC 60.519 63.158 0.00 0.00 33.95 2.67
3434 3693 1.215382 CGGCCTCGTGAGTCATTCA 59.785 57.895 0.00 0.00 0.00 2.57
3435 3694 0.389817 CGGCCTCGTGAGTCATTCAA 60.390 55.000 0.00 0.00 37.61 2.69
3436 3695 1.363744 GGCCTCGTGAGTCATTCAAG 58.636 55.000 0.00 0.00 37.61 3.02
3437 3696 1.363744 GCCTCGTGAGTCATTCAAGG 58.636 55.000 0.00 2.57 37.61 3.61
3438 3697 1.338200 GCCTCGTGAGTCATTCAAGGT 60.338 52.381 0.00 0.00 36.54 3.50
3439 3698 2.094182 GCCTCGTGAGTCATTCAAGGTA 60.094 50.000 0.00 0.00 36.54 3.08
3440 3699 3.775202 CCTCGTGAGTCATTCAAGGTAG 58.225 50.000 0.00 0.00 37.61 3.18
3441 3700 3.193691 CCTCGTGAGTCATTCAAGGTAGT 59.806 47.826 0.00 0.00 37.61 2.73
3442 3701 4.398358 CCTCGTGAGTCATTCAAGGTAGTA 59.602 45.833 0.00 0.00 37.61 1.82
3443 3702 5.105877 CCTCGTGAGTCATTCAAGGTAGTAA 60.106 44.000 0.00 0.00 37.61 2.24
3444 3703 5.706916 TCGTGAGTCATTCAAGGTAGTAAC 58.293 41.667 0.00 0.00 37.61 2.50
3445 3704 5.242171 TCGTGAGTCATTCAAGGTAGTAACA 59.758 40.000 0.00 0.00 37.61 2.41
3446 3705 6.071560 TCGTGAGTCATTCAAGGTAGTAACAT 60.072 38.462 0.00 0.00 37.61 2.71
3447 3706 6.590292 CGTGAGTCATTCAAGGTAGTAACATT 59.410 38.462 0.00 0.00 37.61 2.71
3448 3707 7.117812 CGTGAGTCATTCAAGGTAGTAACATTT 59.882 37.037 0.00 0.00 37.61 2.32
3449 3708 8.784043 GTGAGTCATTCAAGGTAGTAACATTTT 58.216 33.333 0.00 0.00 37.61 1.82
3450 3709 8.783093 TGAGTCATTCAAGGTAGTAACATTTTG 58.217 33.333 0.00 0.00 31.34 2.44
3451 3710 8.918202 AGTCATTCAAGGTAGTAACATTTTGA 57.082 30.769 0.00 0.00 0.00 2.69
3452 3711 8.784043 AGTCATTCAAGGTAGTAACATTTTGAC 58.216 33.333 0.00 0.00 34.57 3.18
3453 3712 8.564574 GTCATTCAAGGTAGTAACATTTTGACA 58.435 33.333 0.00 0.00 34.54 3.58
3454 3713 9.126151 TCATTCAAGGTAGTAACATTTTGACAA 57.874 29.630 0.00 0.00 0.00 3.18
3455 3714 9.743057 CATTCAAGGTAGTAACATTTTGACAAA 57.257 29.630 0.00 0.00 0.00 2.83
3457 3716 9.575783 TTCAAGGTAGTAACATTTTGACAAAAC 57.424 29.630 15.36 3.72 32.37 2.43
3458 3717 8.962679 TCAAGGTAGTAACATTTTGACAAAACT 58.037 29.630 15.36 10.78 32.37 2.66
3459 3718 9.019764 CAAGGTAGTAACATTTTGACAAAACTG 57.980 33.333 15.36 15.47 33.41 3.16
3460 3719 8.514330 AGGTAGTAACATTTTGACAAAACTGA 57.486 30.769 15.36 0.00 32.03 3.41
3461 3720 8.621286 AGGTAGTAACATTTTGACAAAACTGAG 58.379 33.333 15.36 8.63 32.03 3.35
3462 3721 7.860872 GGTAGTAACATTTTGACAAAACTGAGG 59.139 37.037 15.36 6.14 32.03 3.86
3463 3722 7.404671 AGTAACATTTTGACAAAACTGAGGT 57.595 32.000 15.36 7.56 32.03 3.85
3464 3723 7.836842 AGTAACATTTTGACAAAACTGAGGTT 58.163 30.769 15.36 15.09 37.24 3.50
3465 3724 7.973944 AGTAACATTTTGACAAAACTGAGGTTC 59.026 33.333 15.36 3.83 34.14 3.62
3466 3725 5.339990 ACATTTTGACAAAACTGAGGTTCG 58.660 37.500 15.36 0.03 34.14 3.95
3467 3726 5.105917 ACATTTTGACAAAACTGAGGTTCGT 60.106 36.000 15.36 0.00 34.14 3.85
3468 3727 5.379732 TTTTGACAAAACTGAGGTTCGTT 57.620 34.783 9.30 0.00 34.14 3.85
3469 3728 4.609691 TTGACAAAACTGAGGTTCGTTC 57.390 40.909 0.00 0.00 34.14 3.95
3470 3729 2.605818 TGACAAAACTGAGGTTCGTTCG 59.394 45.455 0.00 0.00 34.14 3.95
3471 3730 2.606272 GACAAAACTGAGGTTCGTTCGT 59.394 45.455 0.00 0.00 34.14 3.85
3472 3731 2.350498 ACAAAACTGAGGTTCGTTCGTG 59.650 45.455 0.00 0.00 34.14 4.35
3473 3732 0.935196 AAACTGAGGTTCGTTCGTGC 59.065 50.000 0.00 0.00 34.14 5.34
3474 3733 1.213094 AACTGAGGTTCGTTCGTGCG 61.213 55.000 0.00 0.00 0.00 5.34
3475 3734 1.660575 CTGAGGTTCGTTCGTGCGT 60.661 57.895 1.99 0.00 0.00 5.24
3476 3735 1.876453 CTGAGGTTCGTTCGTGCGTG 61.876 60.000 1.99 0.00 0.00 5.34
3477 3736 1.947642 GAGGTTCGTTCGTGCGTGT 60.948 57.895 1.99 0.00 0.00 4.49
3478 3737 2.142418 GAGGTTCGTTCGTGCGTGTG 62.142 60.000 1.99 0.00 0.00 3.82
3479 3738 2.423039 GTTCGTTCGTGCGTGTGC 60.423 61.111 1.99 0.00 43.20 4.57
3492 3751 2.357954 CGTGTGCGCATCTAATCTTG 57.642 50.000 15.91 0.00 0.00 3.02
3493 3752 1.004610 CGTGTGCGCATCTAATCTTGG 60.005 52.381 15.91 0.00 0.00 3.61
3494 3753 1.016627 TGTGCGCATCTAATCTTGGC 58.983 50.000 15.91 0.00 0.00 4.52
3500 3759 4.530094 CGCATCTAATCTTGGCGTAAAA 57.470 40.909 0.00 0.00 42.51 1.52
3501 3760 4.904116 CGCATCTAATCTTGGCGTAAAAA 58.096 39.130 0.00 0.00 42.51 1.94
3502 3761 4.963953 CGCATCTAATCTTGGCGTAAAAAG 59.036 41.667 0.00 0.00 42.51 2.27
3503 3762 5.447279 CGCATCTAATCTTGGCGTAAAAAGT 60.447 40.000 0.00 0.00 42.51 2.66
3504 3763 6.237996 CGCATCTAATCTTGGCGTAAAAAGTA 60.238 38.462 0.00 0.00 42.51 2.24
3505 3764 7.469260 GCATCTAATCTTGGCGTAAAAAGTAA 58.531 34.615 0.00 0.00 0.00 2.24
3506 3765 7.966204 GCATCTAATCTTGGCGTAAAAAGTAAA 59.034 33.333 0.00 0.00 0.00 2.01
3507 3766 9.834628 CATCTAATCTTGGCGTAAAAAGTAAAA 57.165 29.630 0.00 0.00 0.00 1.52
3509 3768 9.275398 TCTAATCTTGGCGTAAAAAGTAAAAGA 57.725 29.630 0.00 0.00 0.00 2.52
3510 3769 9.543018 CTAATCTTGGCGTAAAAAGTAAAAGAG 57.457 33.333 0.00 0.00 0.00 2.85
3511 3770 5.754778 TCTTGGCGTAAAAAGTAAAAGAGC 58.245 37.500 0.00 0.00 0.00 4.09
3512 3771 4.136517 TGGCGTAAAAAGTAAAAGAGCG 57.863 40.909 0.00 0.00 0.00 5.03
3513 3772 3.058777 TGGCGTAAAAAGTAAAAGAGCGG 60.059 43.478 0.00 0.00 0.00 5.52
3514 3773 2.906776 GCGTAAAAAGTAAAAGAGCGGC 59.093 45.455 0.00 0.00 0.00 6.53
3515 3774 3.607542 GCGTAAAAAGTAAAAGAGCGGCA 60.608 43.478 1.45 0.00 0.00 5.69
3516 3775 4.529446 CGTAAAAAGTAAAAGAGCGGCAA 58.471 39.130 1.45 0.00 0.00 4.52
3517 3776 4.377738 CGTAAAAAGTAAAAGAGCGGCAAC 59.622 41.667 1.45 0.00 0.00 4.17
3518 3777 3.364889 AAAAGTAAAAGAGCGGCAACC 57.635 42.857 1.45 0.00 0.00 3.77
3519 3778 1.975660 AAGTAAAAGAGCGGCAACCA 58.024 45.000 1.45 0.00 0.00 3.67
3520 3779 1.975660 AGTAAAAGAGCGGCAACCAA 58.024 45.000 1.45 0.00 0.00 3.67
3521 3780 2.514803 AGTAAAAGAGCGGCAACCAAT 58.485 42.857 1.45 0.00 0.00 3.16
3522 3781 2.890945 AGTAAAAGAGCGGCAACCAATT 59.109 40.909 1.45 0.00 0.00 2.32
3523 3782 2.908688 AAAAGAGCGGCAACCAATTT 57.091 40.000 1.45 0.00 0.00 1.82
3524 3783 2.153366 AAAGAGCGGCAACCAATTTG 57.847 45.000 1.45 0.00 38.37 2.32
3525 3784 1.039856 AAGAGCGGCAACCAATTTGT 58.960 45.000 1.45 0.00 37.54 2.83
3526 3785 1.039856 AGAGCGGCAACCAATTTGTT 58.960 45.000 1.45 0.00 37.54 2.83
3527 3786 1.139163 GAGCGGCAACCAATTTGTTG 58.861 50.000 16.10 16.10 46.59 3.33
3528 3787 0.463620 AGCGGCAACCAATTTGTTGT 59.536 45.000 20.03 1.76 45.80 3.32
3529 3788 1.134551 AGCGGCAACCAATTTGTTGTT 60.135 42.857 20.03 5.15 45.80 2.83
3530 3789 1.004079 GCGGCAACCAATTTGTTGTTG 60.004 47.619 20.03 14.61 45.80 3.33
3531 3790 1.004079 CGGCAACCAATTTGTTGTTGC 60.004 47.619 23.89 23.89 45.80 4.17
3532 3791 2.365820 GCAACCAATTTGTTGTTGCG 57.634 45.000 20.03 0.00 45.80 4.85
3533 3792 1.663135 GCAACCAATTTGTTGTTGCGT 59.337 42.857 20.03 0.00 45.80 5.24
3534 3793 2.860735 GCAACCAATTTGTTGTTGCGTA 59.139 40.909 20.03 0.00 45.80 4.42
3535 3794 3.492756 GCAACCAATTTGTTGTTGCGTAT 59.507 39.130 20.03 0.00 45.80 3.06
3536 3795 4.375908 GCAACCAATTTGTTGTTGCGTATC 60.376 41.667 20.03 1.70 45.80 2.24
3537 3796 4.846779 ACCAATTTGTTGTTGCGTATCT 57.153 36.364 0.00 0.00 0.00 1.98
3538 3797 5.950758 ACCAATTTGTTGTTGCGTATCTA 57.049 34.783 0.00 0.00 0.00 1.98
3539 3798 6.320494 ACCAATTTGTTGTTGCGTATCTAA 57.680 33.333 0.00 0.00 0.00 2.10
3540 3799 6.919721 ACCAATTTGTTGTTGCGTATCTAAT 58.080 32.000 0.00 0.00 0.00 1.73
3541 3800 7.027161 ACCAATTTGTTGTTGCGTATCTAATC 58.973 34.615 0.00 0.00 0.00 1.75
3542 3801 7.094377 ACCAATTTGTTGTTGCGTATCTAATCT 60.094 33.333 0.00 0.00 0.00 2.40
3543 3802 7.754924 CCAATTTGTTGTTGCGTATCTAATCTT 59.245 33.333 0.00 0.00 0.00 2.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 2.279517 GTGCGCCGGGTCTAGATG 60.280 66.667 4.18 0.00 0.00 2.90
7 8 3.537874 GGTGCGCCGGGTCTAGAT 61.538 66.667 4.18 0.00 0.00 1.98
291 301 0.323816 ACAGATCTCGAGCACTCCCA 60.324 55.000 7.81 0.00 0.00 4.37
297 307 1.657751 CCCGACACAGATCTCGAGCA 61.658 60.000 7.81 0.00 31.24 4.26
432 442 2.430248 TCCACAGACTACCGCAGATA 57.570 50.000 0.00 0.00 0.00 1.98
477 497 2.504367 AGGAAAACAACTACAGCGCAT 58.496 42.857 11.47 0.00 0.00 4.73
492 512 7.466185 CGCACATAATCATACGGTAAAAGGAAA 60.466 37.037 0.00 0.00 0.00 3.13
493 513 6.018588 CGCACATAATCATACGGTAAAAGGAA 60.019 38.462 0.00 0.00 0.00 3.36
582 608 2.991250 ACAAGGCATAGCTCAACGAAT 58.009 42.857 0.00 0.00 0.00 3.34
586 612 3.812053 CCATCTACAAGGCATAGCTCAAC 59.188 47.826 0.00 0.00 0.00 3.18
798 842 3.624326 ATTCAACCACGAACATGTGTG 57.376 42.857 0.00 4.02 38.20 3.82
822 868 7.170965 ACATAACAGGCCTAGAATCATATTGG 58.829 38.462 3.98 0.00 0.00 3.16
832 878 4.099573 GCTGTAGAACATAACAGGCCTAGA 59.900 45.833 3.98 0.00 42.72 2.43
833 879 4.141937 TGCTGTAGAACATAACAGGCCTAG 60.142 45.833 3.98 2.19 42.72 3.02
834 880 3.772572 TGCTGTAGAACATAACAGGCCTA 59.227 43.478 3.98 0.00 42.72 3.93
835 881 2.571653 TGCTGTAGAACATAACAGGCCT 59.428 45.455 0.00 0.00 42.72 5.19
839 885 4.870426 ACGGAATGCTGTAGAACATAACAG 59.130 41.667 0.00 0.00 44.79 3.16
849 895 0.811616 GCAGGGACGGAATGCTGTAG 60.812 60.000 0.00 0.00 37.00 2.74
850 896 1.220749 GCAGGGACGGAATGCTGTA 59.779 57.895 0.00 0.00 37.00 2.74
851 897 2.045926 GCAGGGACGGAATGCTGT 60.046 61.111 0.00 0.00 37.00 4.40
854 900 2.045926 ACAGCAGGGACGGAATGC 60.046 61.111 0.00 0.00 40.29 3.56
856 902 1.194781 AGTCACAGCAGGGACGGAAT 61.195 55.000 5.79 0.00 39.01 3.01
857 903 0.541063 TAGTCACAGCAGGGACGGAA 60.541 55.000 5.79 0.00 39.01 4.30
858 904 0.324368 ATAGTCACAGCAGGGACGGA 60.324 55.000 5.79 0.00 39.01 4.69
859 905 0.537188 AATAGTCACAGCAGGGACGG 59.463 55.000 5.79 0.00 39.01 4.79
860 906 2.688446 TCTAATAGTCACAGCAGGGACG 59.312 50.000 5.79 0.00 39.01 4.79
861 907 4.737855 TTCTAATAGTCACAGCAGGGAC 57.262 45.455 2.74 2.74 0.00 4.46
863 909 5.543507 AGATTCTAATAGTCACAGCAGGG 57.456 43.478 0.00 0.00 0.00 4.45
864 910 7.039434 TGGATAGATTCTAATAGTCACAGCAGG 60.039 40.741 0.00 0.00 0.00 4.85
865 911 7.890515 TGGATAGATTCTAATAGTCACAGCAG 58.109 38.462 0.00 0.00 0.00 4.24
867 913 8.526978 TCATGGATAGATTCTAATAGTCACAGC 58.473 37.037 0.00 0.00 0.00 4.40
877 923 9.466497 AGCAAAACTTTCATGGATAGATTCTAA 57.534 29.630 0.00 0.00 0.00 2.10
880 926 9.113838 TCTAGCAAAACTTTCATGGATAGATTC 57.886 33.333 0.00 0.00 0.00 2.52
884 930 9.118300 AGATTCTAGCAAAACTTTCATGGATAG 57.882 33.333 0.00 0.00 0.00 2.08
886 932 7.395489 ACAGATTCTAGCAAAACTTTCATGGAT 59.605 33.333 0.00 0.00 0.00 3.41
887 933 6.716628 ACAGATTCTAGCAAAACTTTCATGGA 59.283 34.615 0.00 0.00 0.00 3.41
888 934 6.917533 ACAGATTCTAGCAAAACTTTCATGG 58.082 36.000 0.00 0.00 0.00 3.66
889 935 7.864379 ACAACAGATTCTAGCAAAACTTTCATG 59.136 33.333 0.00 0.00 0.00 3.07
890 936 7.945134 ACAACAGATTCTAGCAAAACTTTCAT 58.055 30.769 0.00 0.00 0.00 2.57
891 937 7.283127 AGACAACAGATTCTAGCAAAACTTTCA 59.717 33.333 0.00 0.00 0.00 2.69
892 938 7.643579 AGACAACAGATTCTAGCAAAACTTTC 58.356 34.615 0.00 0.00 0.00 2.62
894 940 8.560374 GTTAGACAACAGATTCTAGCAAAACTT 58.440 33.333 0.00 0.00 34.60 2.66
1092 1170 4.950050 AGTGAGACTCGTGTTTGAGAATT 58.050 39.130 0.00 0.00 39.35 2.17
1094 1172 4.098044 AGAAGTGAGACTCGTGTTTGAGAA 59.902 41.667 0.00 0.00 39.35 2.87
1095 1173 3.632604 AGAAGTGAGACTCGTGTTTGAGA 59.367 43.478 0.00 0.00 39.35 3.27
1097 1175 3.130516 ACAGAAGTGAGACTCGTGTTTGA 59.869 43.478 0.00 0.00 0.00 2.69
1102 1180 4.912766 GTCTAAACAGAAGTGAGACTCGTG 59.087 45.833 0.00 0.00 38.01 4.35
1103 1181 4.579340 TGTCTAAACAGAAGTGAGACTCGT 59.421 41.667 0.00 0.00 40.04 4.18
1121 1202 8.677300 GCAACAAATCTGGAGATAAAATGTCTA 58.323 33.333 0.00 0.00 33.73 2.59
1318 1459 1.894978 GCAGAGAGGAACAGAGGGAGT 60.895 57.143 0.00 0.00 0.00 3.85
1385 1527 1.821258 GTAGCCCTCGAACCCGATT 59.179 57.895 0.00 0.00 44.62 3.34
1439 1581 1.303309 CATGAGGGTCGGCAAAGATC 58.697 55.000 0.00 0.00 0.00 2.75
1577 1719 5.273674 TCTGAGAATAGATGAACAGGCTG 57.726 43.478 14.16 14.16 0.00 4.85
1592 1734 6.013898 AGGTCTTGATCACAATCTTCTGAGAA 60.014 38.462 0.00 0.00 35.07 2.87
1697 1839 6.188344 GATGAACATCCCACGAGAGTACTTG 61.188 48.000 0.00 0.00 35.49 3.16
2009 2151 6.013553 CCATCTCAGGGATAATGTCAGAGATT 60.014 42.308 0.00 0.00 38.41 2.40
2021 2163 2.520120 ACAGACCTCCATCTCAGGGATA 59.480 50.000 0.00 0.00 35.01 2.59
2294 2436 1.142748 GCAGTCGTATGCCTCAGCT 59.857 57.895 3.64 0.00 40.43 4.24
2546 2699 3.112709 GACGGAACAGCGACAGCC 61.113 66.667 0.00 0.00 46.67 4.85
2570 2724 6.345920 ACGACAAACTTAGTCAGAACAAAG 57.654 37.500 0.00 0.00 35.77 2.77
2583 2737 4.696402 TCACAGTAACCAAACGACAAACTT 59.304 37.500 0.00 0.00 0.00 2.66
2613 2772 0.469917 GAGTAGCAATAGCCTGGCCA 59.530 55.000 16.57 4.71 43.56 5.36
2629 2788 7.724951 ACCTAGAGCTAATAGTTTATTCGGAGT 59.275 37.037 0.00 0.00 0.00 3.85
2633 2792 7.659186 ACCACCTAGAGCTAATAGTTTATTCG 58.341 38.462 0.00 0.00 0.00 3.34
2695 2855 9.548208 GCTTATTTATCAGTTTGAGACAACTTC 57.452 33.333 0.00 0.00 0.00 3.01
2754 2915 9.599866 AGTTTCGATTACAGAACATGAATATGA 57.400 29.630 0.00 0.00 37.73 2.15
2758 2919 9.436957 AAGTAGTTTCGATTACAGAACATGAAT 57.563 29.630 0.00 0.00 0.00 2.57
2759 2920 8.827177 AAGTAGTTTCGATTACAGAACATGAA 57.173 30.769 0.00 0.00 0.00 2.57
2760 2921 8.085909 TGAAGTAGTTTCGATTACAGAACATGA 58.914 33.333 0.00 0.00 38.71 3.07
2761 2922 8.162880 GTGAAGTAGTTTCGATTACAGAACATG 58.837 37.037 0.00 0.00 38.71 3.21
2762 2923 7.870954 TGTGAAGTAGTTTCGATTACAGAACAT 59.129 33.333 0.00 0.00 38.71 2.71
2763 2924 7.204604 TGTGAAGTAGTTTCGATTACAGAACA 58.795 34.615 0.00 0.00 38.71 3.18
2764 2925 7.619571 GCTGTGAAGTAGTTTCGATTACAGAAC 60.620 40.741 8.52 0.00 37.88 3.01
2765 2926 6.365247 GCTGTGAAGTAGTTTCGATTACAGAA 59.635 38.462 8.52 0.00 37.88 3.02
2766 2927 5.862323 GCTGTGAAGTAGTTTCGATTACAGA 59.138 40.000 8.52 0.00 37.88 3.41
2767 2928 5.062308 GGCTGTGAAGTAGTTTCGATTACAG 59.938 44.000 0.00 0.00 38.32 2.74
2768 2929 4.927425 GGCTGTGAAGTAGTTTCGATTACA 59.073 41.667 0.00 0.00 38.71 2.41
2769 2930 4.031426 CGGCTGTGAAGTAGTTTCGATTAC 59.969 45.833 0.00 0.00 38.71 1.89
2770 2931 4.082625 TCGGCTGTGAAGTAGTTTCGATTA 60.083 41.667 0.00 0.00 38.71 1.75
2771 2932 2.993899 CGGCTGTGAAGTAGTTTCGATT 59.006 45.455 0.00 0.00 38.71 3.34
2772 2933 2.230508 TCGGCTGTGAAGTAGTTTCGAT 59.769 45.455 0.00 0.00 38.71 3.59
2773 2934 1.610038 TCGGCTGTGAAGTAGTTTCGA 59.390 47.619 0.00 0.00 38.71 3.71
2774 2935 2.060326 TCGGCTGTGAAGTAGTTTCG 57.940 50.000 0.00 0.00 38.71 3.46
2775 2936 3.552294 GCTATCGGCTGTGAAGTAGTTTC 59.448 47.826 0.00 0.00 38.06 2.78
2776 2937 3.522553 GCTATCGGCTGTGAAGTAGTTT 58.477 45.455 0.00 0.00 38.06 2.66
2777 2938 3.166489 GCTATCGGCTGTGAAGTAGTT 57.834 47.619 0.00 0.00 38.06 2.24
2778 2939 2.873133 GCTATCGGCTGTGAAGTAGT 57.127 50.000 0.00 0.00 38.06 2.73
2789 2950 0.249489 ATCGTCCAACAGCTATCGGC 60.249 55.000 0.00 0.00 42.19 5.54
2790 2951 2.128035 GAATCGTCCAACAGCTATCGG 58.872 52.381 0.00 0.00 0.00 4.18
2791 2952 2.809446 TGAATCGTCCAACAGCTATCG 58.191 47.619 0.00 0.00 0.00 2.92
2792 2953 3.001736 GCTTGAATCGTCCAACAGCTATC 59.998 47.826 0.00 0.00 0.00 2.08
2793 2954 2.939103 GCTTGAATCGTCCAACAGCTAT 59.061 45.455 0.00 0.00 0.00 2.97
2794 2955 2.289382 TGCTTGAATCGTCCAACAGCTA 60.289 45.455 0.00 0.00 0.00 3.32
2795 2956 1.160137 GCTTGAATCGTCCAACAGCT 58.840 50.000 0.00 0.00 0.00 4.24
2796 2957 0.874390 TGCTTGAATCGTCCAACAGC 59.126 50.000 0.00 0.00 0.00 4.40
2797 2958 1.136252 CGTGCTTGAATCGTCCAACAG 60.136 52.381 0.00 0.00 0.00 3.16
2798 2959 0.865111 CGTGCTTGAATCGTCCAACA 59.135 50.000 0.00 0.00 0.00 3.33
2799 2960 1.144969 TCGTGCTTGAATCGTCCAAC 58.855 50.000 0.00 0.00 0.00 3.77
2800 2961 2.093306 ATCGTGCTTGAATCGTCCAA 57.907 45.000 0.00 0.00 0.00 3.53
2801 2962 1.999735 GAATCGTGCTTGAATCGTCCA 59.000 47.619 0.00 0.00 0.00 4.02
2802 2963 2.271800 AGAATCGTGCTTGAATCGTCC 58.728 47.619 0.00 0.00 0.00 4.79
2803 2964 3.999229 AAGAATCGTGCTTGAATCGTC 57.001 42.857 0.00 0.00 0.00 4.20
2804 2965 5.812642 AGATTAAGAATCGTGCTTGAATCGT 59.187 36.000 0.00 0.00 42.75 3.73
2805 2966 6.279227 AGATTAAGAATCGTGCTTGAATCG 57.721 37.500 0.00 0.00 42.75 3.34
2806 2967 8.272176 CACTAGATTAAGAATCGTGCTTGAATC 58.728 37.037 0.00 0.00 42.75 2.52
2807 2968 7.225538 CCACTAGATTAAGAATCGTGCTTGAAT 59.774 37.037 0.00 0.00 42.75 2.57
2808 2969 6.535150 CCACTAGATTAAGAATCGTGCTTGAA 59.465 38.462 0.00 0.00 42.75 2.69
2809 2970 6.042777 CCACTAGATTAAGAATCGTGCTTGA 58.957 40.000 0.00 0.00 42.75 3.02
2810 2971 5.277058 GCCACTAGATTAAGAATCGTGCTTG 60.277 44.000 0.00 0.00 42.75 4.01
2811 2972 4.811557 GCCACTAGATTAAGAATCGTGCTT 59.188 41.667 0.00 0.00 42.75 3.91
2812 2973 4.100189 AGCCACTAGATTAAGAATCGTGCT 59.900 41.667 0.00 0.00 42.75 4.40
2813 2974 4.210120 CAGCCACTAGATTAAGAATCGTGC 59.790 45.833 0.00 0.00 42.75 5.34
2814 2975 5.233050 CACAGCCACTAGATTAAGAATCGTG 59.767 44.000 0.00 0.00 42.75 4.35
2815 2976 5.105310 ACACAGCCACTAGATTAAGAATCGT 60.105 40.000 0.00 0.00 42.75 3.73
2816 2977 5.352284 ACACAGCCACTAGATTAAGAATCG 58.648 41.667 0.00 0.00 42.75 3.34
2817 2978 6.457528 GCAACACAGCCACTAGATTAAGAATC 60.458 42.308 0.00 0.00 38.20 2.52
2818 2979 5.355350 GCAACACAGCCACTAGATTAAGAAT 59.645 40.000 0.00 0.00 0.00 2.40
2819 2980 4.695455 GCAACACAGCCACTAGATTAAGAA 59.305 41.667 0.00 0.00 0.00 2.52
2820 2981 4.253685 GCAACACAGCCACTAGATTAAGA 58.746 43.478 0.00 0.00 0.00 2.10
2821 2982 4.002982 TGCAACACAGCCACTAGATTAAG 58.997 43.478 0.00 0.00 0.00 1.85
2822 2983 3.751175 GTGCAACACAGCCACTAGATTAA 59.249 43.478 0.00 0.00 36.32 1.40
2823 2984 3.334691 GTGCAACACAGCCACTAGATTA 58.665 45.455 0.00 0.00 36.32 1.75
2824 2985 2.154462 GTGCAACACAGCCACTAGATT 58.846 47.619 0.00 0.00 36.32 2.40
2825 2986 1.611673 GGTGCAACACAGCCACTAGAT 60.612 52.381 0.00 0.00 41.06 1.98
2826 2987 0.250295 GGTGCAACACAGCCACTAGA 60.250 55.000 0.00 0.00 41.06 2.43
2827 2988 2.247790 GGTGCAACACAGCCACTAG 58.752 57.895 0.00 0.00 41.06 2.57
2828 2989 4.473643 GGTGCAACACAGCCACTA 57.526 55.556 0.00 0.00 41.06 2.74
2833 2994 3.676324 CCTAGTACTAGGTGCAACACAGC 60.676 52.174 32.81 0.00 45.93 4.40
2834 2995 4.111375 CCTAGTACTAGGTGCAACACAG 57.889 50.000 32.81 10.15 45.93 3.66
2845 3006 4.636648 CAGGCCATCGATACCTAGTACTAG 59.363 50.000 21.11 21.11 30.84 2.57
2846 3007 4.287845 TCAGGCCATCGATACCTAGTACTA 59.712 45.833 16.57 1.89 30.84 1.82
2847 3008 3.074094 TCAGGCCATCGATACCTAGTACT 59.926 47.826 16.57 0.00 30.84 2.73
2848 3009 3.418995 TCAGGCCATCGATACCTAGTAC 58.581 50.000 16.57 0.00 30.84 2.73
2849 3010 3.801307 TCAGGCCATCGATACCTAGTA 57.199 47.619 16.57 5.49 30.84 1.82
2850 3011 2.677542 TCAGGCCATCGATACCTAGT 57.322 50.000 16.57 0.00 30.84 2.57
2851 3012 4.248859 CAATTCAGGCCATCGATACCTAG 58.751 47.826 16.57 11.98 30.84 3.02
2852 3013 3.557054 GCAATTCAGGCCATCGATACCTA 60.557 47.826 16.57 5.46 30.84 3.08
2853 3014 2.811873 GCAATTCAGGCCATCGATACCT 60.812 50.000 5.01 12.32 0.00 3.08
2854 3015 1.537202 GCAATTCAGGCCATCGATACC 59.463 52.381 5.01 2.66 0.00 2.73
2855 3016 2.221169 TGCAATTCAGGCCATCGATAC 58.779 47.619 5.01 0.00 0.00 2.24
2856 3017 2.497138 CTGCAATTCAGGCCATCGATA 58.503 47.619 5.01 0.00 39.15 2.92
2857 3018 1.315690 CTGCAATTCAGGCCATCGAT 58.684 50.000 5.01 0.00 39.15 3.59
2858 3019 2.784547 CTGCAATTCAGGCCATCGA 58.215 52.632 5.01 0.00 39.15 3.59
2867 3028 3.669536 TGTTGGACGATACTGCAATTCA 58.330 40.909 0.00 0.00 0.00 2.57
2868 3029 4.678509 TTGTTGGACGATACTGCAATTC 57.321 40.909 0.00 0.00 0.00 2.17
2869 3030 4.201812 CGATTGTTGGACGATACTGCAATT 60.202 41.667 0.00 0.00 0.00 2.32
2870 3031 3.309682 CGATTGTTGGACGATACTGCAAT 59.690 43.478 0.00 0.00 0.00 3.56
2871 3032 2.670905 CGATTGTTGGACGATACTGCAA 59.329 45.455 0.00 0.00 0.00 4.08
2872 3033 2.267426 CGATTGTTGGACGATACTGCA 58.733 47.619 0.00 0.00 0.00 4.41
2873 3034 1.593006 CCGATTGTTGGACGATACTGC 59.407 52.381 0.00 0.00 0.00 4.40
2874 3035 1.593006 GCCGATTGTTGGACGATACTG 59.407 52.381 0.00 0.00 0.00 2.74
2875 3036 1.480954 AGCCGATTGTTGGACGATACT 59.519 47.619 0.00 0.00 0.00 2.12
2876 3037 1.593006 CAGCCGATTGTTGGACGATAC 59.407 52.381 0.00 0.00 0.00 2.24
2877 3038 1.934589 CAGCCGATTGTTGGACGATA 58.065 50.000 0.00 0.00 0.00 2.92
2878 3039 2.767536 CAGCCGATTGTTGGACGAT 58.232 52.632 0.00 0.00 0.00 3.73
2879 3040 4.277239 CAGCCGATTGTTGGACGA 57.723 55.556 0.00 0.00 0.00 4.20
2883 3044 1.135315 CATGTTCCAGCCGATTGTTGG 60.135 52.381 0.00 0.00 46.16 3.77
2884 3045 1.541147 ACATGTTCCAGCCGATTGTTG 59.459 47.619 0.00 0.00 0.00 3.33
2885 3046 1.812571 GACATGTTCCAGCCGATTGTT 59.187 47.619 0.00 0.00 0.00 2.83
2886 3047 1.453155 GACATGTTCCAGCCGATTGT 58.547 50.000 0.00 0.00 0.00 2.71
2887 3048 0.374758 CGACATGTTCCAGCCGATTG 59.625 55.000 0.00 0.00 0.00 2.67
2888 3049 0.036388 ACGACATGTTCCAGCCGATT 60.036 50.000 0.00 0.00 0.00 3.34
2889 3050 0.740868 CACGACATGTTCCAGCCGAT 60.741 55.000 0.00 0.00 0.00 4.18
2890 3051 1.374125 CACGACATGTTCCAGCCGA 60.374 57.895 0.00 0.00 0.00 5.54
2891 3052 1.667830 ACACGACATGTTCCAGCCG 60.668 57.895 0.00 0.00 38.98 5.52
2892 3053 1.868997 CACACGACATGTTCCAGCC 59.131 57.895 0.00 0.00 40.64 4.85
2893 3054 1.207593 GCACACGACATGTTCCAGC 59.792 57.895 0.00 0.00 40.64 4.85
2894 3055 1.159285 ATGCACACGACATGTTCCAG 58.841 50.000 0.00 0.00 40.64 3.86
2895 3056 2.345876 CTATGCACACGACATGTTCCA 58.654 47.619 0.00 0.00 40.64 3.53
2896 3057 1.062587 GCTATGCACACGACATGTTCC 59.937 52.381 0.00 0.00 40.64 3.62
2897 3058 1.731709 TGCTATGCACACGACATGTTC 59.268 47.619 0.00 0.00 40.64 3.18
2898 3059 1.733912 CTGCTATGCACACGACATGTT 59.266 47.619 0.00 0.00 40.64 2.71
2899 3060 1.362768 CTGCTATGCACACGACATGT 58.637 50.000 0.00 0.00 44.81 3.21
2900 3061 0.027194 GCTGCTATGCACACGACATG 59.973 55.000 0.00 0.00 33.79 3.21
2901 3062 0.391528 TGCTGCTATGCACACGACAT 60.392 50.000 0.00 0.00 38.12 3.06
2902 3063 1.005156 TGCTGCTATGCACACGACA 60.005 52.632 0.00 0.00 38.12 4.35
2903 3064 3.874873 TGCTGCTATGCACACGAC 58.125 55.556 0.00 0.00 38.12 4.34
2909 3070 1.277273 ACAGAAGAGTGCTGCTATGCA 59.723 47.619 0.00 0.00 41.05 3.96
2910 3071 2.021355 ACAGAAGAGTGCTGCTATGC 57.979 50.000 0.00 0.00 36.86 3.14
2911 3072 5.007430 CCAATTACAGAAGAGTGCTGCTATG 59.993 44.000 0.00 0.00 36.86 2.23
2912 3073 5.121811 CCAATTACAGAAGAGTGCTGCTAT 58.878 41.667 0.00 0.00 36.86 2.97
2913 3074 4.020218 ACCAATTACAGAAGAGTGCTGCTA 60.020 41.667 0.00 0.00 36.86 3.49
2914 3075 3.244700 ACCAATTACAGAAGAGTGCTGCT 60.245 43.478 0.00 0.00 36.86 4.24
2915 3076 3.077359 ACCAATTACAGAAGAGTGCTGC 58.923 45.455 0.00 0.00 36.86 5.25
2916 3077 4.067896 ACACCAATTACAGAAGAGTGCTG 58.932 43.478 0.00 0.00 39.26 4.41
2917 3078 4.357918 ACACCAATTACAGAAGAGTGCT 57.642 40.909 0.00 0.00 0.00 4.40
2918 3079 5.701290 AGTAACACCAATTACAGAAGAGTGC 59.299 40.000 0.00 0.00 37.49 4.40
2919 3080 7.116948 CAGAGTAACACCAATTACAGAAGAGTG 59.883 40.741 0.00 0.00 37.49 3.51
2920 3081 7.155328 CAGAGTAACACCAATTACAGAAGAGT 58.845 38.462 0.00 0.00 37.49 3.24
2921 3082 7.116948 CACAGAGTAACACCAATTACAGAAGAG 59.883 40.741 0.00 0.00 37.49 2.85
2922 3083 6.929049 CACAGAGTAACACCAATTACAGAAGA 59.071 38.462 0.00 0.00 37.49 2.87
2923 3084 6.347725 GCACAGAGTAACACCAATTACAGAAG 60.348 42.308 0.00 0.00 37.49 2.85
2924 3085 5.468746 GCACAGAGTAACACCAATTACAGAA 59.531 40.000 0.00 0.00 37.49 3.02
2925 3086 4.994852 GCACAGAGTAACACCAATTACAGA 59.005 41.667 0.00 0.00 37.49 3.41
2926 3087 4.154195 GGCACAGAGTAACACCAATTACAG 59.846 45.833 0.00 0.00 37.49 2.74
2927 3088 4.069304 GGCACAGAGTAACACCAATTACA 58.931 43.478 0.00 0.00 37.49 2.41
2928 3089 4.069304 TGGCACAGAGTAACACCAATTAC 58.931 43.478 0.00 0.00 35.62 1.89
2934 3095 2.256117 ACTTGGCACAGAGTAACACC 57.744 50.000 0.00 0.00 42.39 4.16
2981 3235 0.398318 ATAGGCGAGGGGAAATGAGC 59.602 55.000 0.00 0.00 0.00 4.26
2984 3238 2.551071 GGAAGATAGGCGAGGGGAAATG 60.551 54.545 0.00 0.00 0.00 2.32
2985 3239 1.700186 GGAAGATAGGCGAGGGGAAAT 59.300 52.381 0.00 0.00 0.00 2.17
2986 3240 1.129058 GGAAGATAGGCGAGGGGAAA 58.871 55.000 0.00 0.00 0.00 3.13
2987 3241 0.264955 AGGAAGATAGGCGAGGGGAA 59.735 55.000 0.00 0.00 0.00 3.97
2988 3242 1.155323 TAGGAAGATAGGCGAGGGGA 58.845 55.000 0.00 0.00 0.00 4.81
2989 3243 1.258676 GTAGGAAGATAGGCGAGGGG 58.741 60.000 0.00 0.00 0.00 4.79
2990 3244 1.203075 AGGTAGGAAGATAGGCGAGGG 60.203 57.143 0.00 0.00 0.00 4.30
2991 3245 2.164338 GAGGTAGGAAGATAGGCGAGG 58.836 57.143 0.00 0.00 0.00 4.63
2992 3246 2.865079 TGAGGTAGGAAGATAGGCGAG 58.135 52.381 0.00 0.00 0.00 5.03
2993 3247 3.527507 ATGAGGTAGGAAGATAGGCGA 57.472 47.619 0.00 0.00 0.00 5.54
2994 3248 3.127203 CGTATGAGGTAGGAAGATAGGCG 59.873 52.174 0.00 0.00 0.00 5.52
2995 3249 3.444388 CCGTATGAGGTAGGAAGATAGGC 59.556 52.174 0.00 0.00 0.00 3.93
2996 3250 3.444388 GCCGTATGAGGTAGGAAGATAGG 59.556 52.174 0.00 0.00 0.00 2.57
2997 3251 4.337145 AGCCGTATGAGGTAGGAAGATAG 58.663 47.826 0.00 0.00 0.00 2.08
2998 3252 4.202535 TGAGCCGTATGAGGTAGGAAGATA 60.203 45.833 0.00 0.00 0.00 1.98
2999 3253 3.158676 GAGCCGTATGAGGTAGGAAGAT 58.841 50.000 0.00 0.00 0.00 2.40
3000 3254 2.092049 TGAGCCGTATGAGGTAGGAAGA 60.092 50.000 0.00 0.00 0.00 2.87
3001 3255 2.294791 CTGAGCCGTATGAGGTAGGAAG 59.705 54.545 0.00 0.00 0.00 3.46
3002 3256 2.092049 TCTGAGCCGTATGAGGTAGGAA 60.092 50.000 0.00 0.00 0.00 3.36
3003 3257 1.493446 TCTGAGCCGTATGAGGTAGGA 59.507 52.381 0.00 0.00 0.00 2.94
3004 3258 1.982660 TCTGAGCCGTATGAGGTAGG 58.017 55.000 0.00 0.00 0.00 3.18
3005 3259 4.592485 ATTTCTGAGCCGTATGAGGTAG 57.408 45.455 0.00 0.00 0.00 3.18
3006 3260 4.693283 CAATTTCTGAGCCGTATGAGGTA 58.307 43.478 0.00 0.00 0.00 3.08
3007 3261 3.535561 CAATTTCTGAGCCGTATGAGGT 58.464 45.455 0.00 0.00 0.00 3.85
3008 3262 2.289002 GCAATTTCTGAGCCGTATGAGG 59.711 50.000 0.00 0.00 0.00 3.86
3009 3263 3.201290 AGCAATTTCTGAGCCGTATGAG 58.799 45.455 0.00 0.00 0.00 2.90
3010 3264 3.266510 AGCAATTTCTGAGCCGTATGA 57.733 42.857 0.00 0.00 0.00 2.15
3011 3265 6.591448 TCATATAGCAATTTCTGAGCCGTATG 59.409 38.462 0.00 0.00 32.23 2.39
3012 3266 6.701340 TCATATAGCAATTTCTGAGCCGTAT 58.299 36.000 0.00 0.00 0.00 3.06
3013 3267 6.096673 TCATATAGCAATTTCTGAGCCGTA 57.903 37.500 0.00 0.00 0.00 4.02
3014 3268 4.960938 TCATATAGCAATTTCTGAGCCGT 58.039 39.130 0.00 0.00 0.00 5.68
3015 3269 5.929697 TTCATATAGCAATTTCTGAGCCG 57.070 39.130 0.00 0.00 0.00 5.52
3016 3270 7.811713 GGAAATTCATATAGCAATTTCTGAGCC 59.188 37.037 20.71 9.41 43.82 4.70
3017 3271 7.811713 GGGAAATTCATATAGCAATTTCTGAGC 59.188 37.037 20.71 11.12 43.82 4.26
3018 3272 8.302438 GGGGAAATTCATATAGCAATTTCTGAG 58.698 37.037 20.71 0.00 43.82 3.35
3019 3273 7.233348 GGGGGAAATTCATATAGCAATTTCTGA 59.767 37.037 20.71 0.00 43.82 3.27
3020 3274 7.234166 AGGGGGAAATTCATATAGCAATTTCTG 59.766 37.037 20.71 0.00 43.82 3.02
3021 3275 7.308320 AGGGGGAAATTCATATAGCAATTTCT 58.692 34.615 20.71 7.87 43.82 2.52
3022 3276 7.544804 AGGGGGAAATTCATATAGCAATTTC 57.455 36.000 16.68 16.68 43.69 2.17
3023 3277 9.259832 GATAGGGGGAAATTCATATAGCAATTT 57.740 33.333 0.00 4.74 35.38 1.82
3024 3278 8.627377 AGATAGGGGGAAATTCATATAGCAATT 58.373 33.333 0.00 0.00 0.00 2.32
3025 3279 8.179888 AGATAGGGGGAAATTCATATAGCAAT 57.820 34.615 0.00 0.00 0.00 3.56
3026 3280 7.588866 AGATAGGGGGAAATTCATATAGCAA 57.411 36.000 0.00 0.00 0.00 3.91
3027 3281 7.588866 AAGATAGGGGGAAATTCATATAGCA 57.411 36.000 0.00 0.00 0.00 3.49
3028 3282 9.397280 GTTAAGATAGGGGGAAATTCATATAGC 57.603 37.037 0.00 0.00 0.00 2.97
3031 3285 9.182642 TCAGTTAAGATAGGGGGAAATTCATAT 57.817 33.333 0.00 0.00 0.00 1.78
3032 3286 8.575736 TCAGTTAAGATAGGGGGAAATTCATA 57.424 34.615 0.00 0.00 0.00 2.15
3033 3287 7.465900 TCAGTTAAGATAGGGGGAAATTCAT 57.534 36.000 0.00 0.00 0.00 2.57
3034 3288 6.901615 TCAGTTAAGATAGGGGGAAATTCA 57.098 37.500 0.00 0.00 0.00 2.57
3035 3289 8.768501 AATTCAGTTAAGATAGGGGGAAATTC 57.231 34.615 0.00 0.00 0.00 2.17
3036 3290 8.981659 CAAATTCAGTTAAGATAGGGGGAAATT 58.018 33.333 0.00 0.00 0.00 1.82
3037 3291 8.343787 TCAAATTCAGTTAAGATAGGGGGAAAT 58.656 33.333 0.00 0.00 0.00 2.17
3038 3292 7.704727 TCAAATTCAGTTAAGATAGGGGGAAA 58.295 34.615 0.00 0.00 0.00 3.13
3039 3293 7.278724 TCAAATTCAGTTAAGATAGGGGGAA 57.721 36.000 0.00 0.00 0.00 3.97
3040 3294 6.901615 TCAAATTCAGTTAAGATAGGGGGA 57.098 37.500 0.00 0.00 0.00 4.81
3041 3295 8.539117 AAATCAAATTCAGTTAAGATAGGGGG 57.461 34.615 0.00 0.00 0.00 5.40
3080 3334 4.954875 TGCTTAACCCAAGAACAAATTGG 58.045 39.130 0.00 0.00 45.68 3.16
3081 3335 5.841810 TCTGCTTAACCCAAGAACAAATTG 58.158 37.500 0.00 0.00 36.22 2.32
3082 3336 6.323739 TCTTCTGCTTAACCCAAGAACAAATT 59.676 34.615 0.00 0.00 36.22 1.82
3083 3337 5.833131 TCTTCTGCTTAACCCAAGAACAAAT 59.167 36.000 0.00 0.00 36.22 2.32
3084 3338 5.197451 TCTTCTGCTTAACCCAAGAACAAA 58.803 37.500 0.00 0.00 36.22 2.83
3085 3339 4.787551 TCTTCTGCTTAACCCAAGAACAA 58.212 39.130 0.00 0.00 36.22 2.83
3086 3340 4.431416 TCTTCTGCTTAACCCAAGAACA 57.569 40.909 0.00 0.00 36.22 3.18
3087 3341 5.767816 TTTCTTCTGCTTAACCCAAGAAC 57.232 39.130 0.00 0.00 36.22 3.01
3088 3342 6.976934 AATTTCTTCTGCTTAACCCAAGAA 57.023 33.333 0.00 0.00 36.22 2.52
3089 3343 8.650143 ATTAATTTCTTCTGCTTAACCCAAGA 57.350 30.769 0.00 0.00 36.22 3.02
3162 3416 5.453198 GCTTCATTCTTCAAGGTGGGAAAAA 60.453 40.000 0.00 0.00 0.00 1.94
3163 3417 4.039124 GCTTCATTCTTCAAGGTGGGAAAA 59.961 41.667 0.00 0.00 0.00 2.29
3164 3418 3.573967 GCTTCATTCTTCAAGGTGGGAAA 59.426 43.478 0.00 0.00 0.00 3.13
3165 3419 3.157087 GCTTCATTCTTCAAGGTGGGAA 58.843 45.455 0.00 0.00 0.00 3.97
3166 3420 2.108075 TGCTTCATTCTTCAAGGTGGGA 59.892 45.455 0.00 0.00 0.00 4.37
3167 3421 2.517959 TGCTTCATTCTTCAAGGTGGG 58.482 47.619 0.00 0.00 0.00 4.61
3168 3422 4.219070 TGATTGCTTCATTCTTCAAGGTGG 59.781 41.667 0.00 0.00 0.00 4.61
3169 3423 5.381174 TGATTGCTTCATTCTTCAAGGTG 57.619 39.130 0.00 0.00 0.00 4.00
3170 3424 5.950549 AGATGATTGCTTCATTCTTCAAGGT 59.049 36.000 4.54 0.00 45.29 3.50
3171 3425 6.452494 AGATGATTGCTTCATTCTTCAAGG 57.548 37.500 4.54 0.00 45.29 3.61
3172 3426 6.183360 ACGAGATGATTGCTTCATTCTTCAAG 60.183 38.462 4.54 0.00 45.29 3.02
3173 3427 5.645067 ACGAGATGATTGCTTCATTCTTCAA 59.355 36.000 4.54 0.00 45.29 2.69
3174 3428 5.181009 ACGAGATGATTGCTTCATTCTTCA 58.819 37.500 4.54 0.00 45.29 3.02
3175 3429 5.731599 ACGAGATGATTGCTTCATTCTTC 57.268 39.130 4.54 3.58 45.29 2.87
3176 3430 5.233050 CGTACGAGATGATTGCTTCATTCTT 59.767 40.000 10.44 2.46 45.29 2.52
3177 3431 4.742167 CGTACGAGATGATTGCTTCATTCT 59.258 41.667 10.44 4.03 45.29 2.40
3178 3432 4.607114 GCGTACGAGATGATTGCTTCATTC 60.607 45.833 21.65 0.00 45.29 2.67
3179 3433 3.246226 GCGTACGAGATGATTGCTTCATT 59.754 43.478 21.65 0.00 45.29 2.57
3180 3434 4.634746 CGCGTACGAGATGATTGCTTCAT 61.635 47.826 21.65 2.84 44.76 2.57
3181 3435 2.193447 GCGTACGAGATGATTGCTTCA 58.807 47.619 21.65 0.00 39.12 3.02
3182 3436 1.188138 CGCGTACGAGATGATTGCTTC 59.812 52.381 21.65 0.00 43.93 3.86
3183 3437 1.200483 CGCGTACGAGATGATTGCTT 58.800 50.000 21.65 0.00 43.93 3.91
3184 3438 1.209275 GCGCGTACGAGATGATTGCT 61.209 55.000 23.53 0.00 43.93 3.91
3185 3439 1.199370 GCGCGTACGAGATGATTGC 59.801 57.895 23.53 6.78 43.93 3.56
3186 3440 0.500178 CTGCGCGTACGAGATGATTG 59.500 55.000 23.53 1.60 43.93 2.67
3187 3441 0.595053 CCTGCGCGTACGAGATGATT 60.595 55.000 23.53 0.00 43.93 2.57
3233 3487 5.146460 TCAAACAAAAGAATGATTCGAGCG 58.854 37.500 0.00 0.00 34.02 5.03
3265 3520 9.804977 AAGATAAGGATGAAGAATCAAATAGGG 57.195 33.333 0.00 0.00 39.49 3.53
3305 3560 7.637229 CACGAATCAGAAATGCAGAAGATAAT 58.363 34.615 0.00 0.00 0.00 1.28
3368 3627 2.589798 AATGCAGCCGGAATGAATTG 57.410 45.000 5.05 0.00 0.00 2.32
3378 3637 0.597568 TCAGTTGGAAAATGCAGCCG 59.402 50.000 0.00 0.00 42.52 5.52
3379 3638 2.818130 TTCAGTTGGAAAATGCAGCC 57.182 45.000 0.00 0.00 42.52 4.85
3389 3648 2.238521 GCACCTTCCATTTCAGTTGGA 58.761 47.619 0.00 0.00 41.50 3.53
3390 3649 1.273327 GGCACCTTCCATTTCAGTTGG 59.727 52.381 0.00 0.00 35.45 3.77
3391 3650 1.962807 TGGCACCTTCCATTTCAGTTG 59.037 47.619 0.00 0.00 0.00 3.16
3392 3651 2.242043 CTGGCACCTTCCATTTCAGTT 58.758 47.619 0.00 0.00 35.22 3.16
3393 3652 1.145738 ACTGGCACCTTCCATTTCAGT 59.854 47.619 0.00 0.00 35.22 3.41
3394 3653 1.542915 CACTGGCACCTTCCATTTCAG 59.457 52.381 0.00 0.00 35.22 3.02
3395 3654 1.619654 CACTGGCACCTTCCATTTCA 58.380 50.000 0.00 0.00 35.22 2.69
3396 3655 0.244721 GCACTGGCACCTTCCATTTC 59.755 55.000 0.00 0.00 40.72 2.17
3397 3656 1.187567 GGCACTGGCACCTTCCATTT 61.188 55.000 0.00 0.00 43.71 2.32
3398 3657 1.607467 GGCACTGGCACCTTCCATT 60.607 57.895 0.00 0.00 43.71 3.16
3399 3658 2.036256 GGCACTGGCACCTTCCAT 59.964 61.111 0.00 0.00 43.71 3.41
3400 3659 4.641645 CGGCACTGGCACCTTCCA 62.642 66.667 3.16 0.00 43.71 3.53
3414 3673 3.665675 AATGACTCACGAGGCCGGC 62.666 63.158 21.18 21.18 40.78 6.13
3415 3674 1.519455 GAATGACTCACGAGGCCGG 60.519 63.158 0.00 0.00 40.78 6.13
3416 3675 0.389817 TTGAATGACTCACGAGGCCG 60.390 55.000 0.00 0.00 42.50 6.13
3417 3676 1.363744 CTTGAATGACTCACGAGGCC 58.636 55.000 0.00 0.00 34.90 5.19
3418 3677 1.338200 ACCTTGAATGACTCACGAGGC 60.338 52.381 0.00 0.00 36.01 4.70
3419 3678 2.751166 ACCTTGAATGACTCACGAGG 57.249 50.000 0.00 0.00 37.86 4.63
3420 3679 4.442375 ACTACCTTGAATGACTCACGAG 57.558 45.455 0.00 0.00 32.21 4.18
3421 3680 5.242171 TGTTACTACCTTGAATGACTCACGA 59.758 40.000 0.00 0.00 32.21 4.35
3422 3681 5.466819 TGTTACTACCTTGAATGACTCACG 58.533 41.667 0.00 0.00 32.21 4.35
3423 3682 7.907214 AATGTTACTACCTTGAATGACTCAC 57.093 36.000 0.00 0.00 32.21 3.51
3424 3683 8.783093 CAAAATGTTACTACCTTGAATGACTCA 58.217 33.333 0.00 0.00 0.00 3.41
3425 3684 8.999431 TCAAAATGTTACTACCTTGAATGACTC 58.001 33.333 0.00 0.00 0.00 3.36
3426 3685 8.784043 GTCAAAATGTTACTACCTTGAATGACT 58.216 33.333 0.00 0.00 0.00 3.41
3427 3686 8.564574 TGTCAAAATGTTACTACCTTGAATGAC 58.435 33.333 0.00 0.00 33.44 3.06
3428 3687 8.684386 TGTCAAAATGTTACTACCTTGAATGA 57.316 30.769 0.00 0.00 0.00 2.57
3429 3688 9.743057 TTTGTCAAAATGTTACTACCTTGAATG 57.257 29.630 0.00 0.00 0.00 2.67
3431 3690 9.575783 GTTTTGTCAAAATGTTACTACCTTGAA 57.424 29.630 13.65 0.00 32.22 2.69
3432 3691 8.962679 AGTTTTGTCAAAATGTTACTACCTTGA 58.037 29.630 13.65 0.00 32.22 3.02
3433 3692 9.019764 CAGTTTTGTCAAAATGTTACTACCTTG 57.980 33.333 13.65 0.00 34.03 3.61
3434 3693 8.962679 TCAGTTTTGTCAAAATGTTACTACCTT 58.037 29.630 13.65 0.00 38.76 3.50
3435 3694 8.514330 TCAGTTTTGTCAAAATGTTACTACCT 57.486 30.769 13.65 0.87 38.76 3.08
3436 3695 7.860872 CCTCAGTTTTGTCAAAATGTTACTACC 59.139 37.037 13.65 0.00 38.76 3.18
3437 3696 8.403236 ACCTCAGTTTTGTCAAAATGTTACTAC 58.597 33.333 13.65 0.00 38.76 2.73
3438 3697 8.514330 ACCTCAGTTTTGTCAAAATGTTACTA 57.486 30.769 13.65 0.00 38.76 1.82
3439 3698 7.404671 ACCTCAGTTTTGTCAAAATGTTACT 57.595 32.000 13.65 4.13 38.76 2.24
3440 3699 7.044314 CGAACCTCAGTTTTGTCAAAATGTTAC 60.044 37.037 13.65 1.85 38.76 2.50
3441 3700 6.970043 CGAACCTCAGTTTTGTCAAAATGTTA 59.030 34.615 13.65 0.78 38.76 2.41
3442 3701 5.804979 CGAACCTCAGTTTTGTCAAAATGTT 59.195 36.000 13.65 11.50 38.76 2.71
3443 3702 5.105917 ACGAACCTCAGTTTTGTCAAAATGT 60.106 36.000 13.65 2.49 38.76 2.71
3444 3703 5.339990 ACGAACCTCAGTTTTGTCAAAATG 58.660 37.500 13.65 12.22 38.97 2.32
3445 3704 5.576447 ACGAACCTCAGTTTTGTCAAAAT 57.424 34.783 13.65 1.40 35.94 1.82
3446 3705 5.379732 AACGAACCTCAGTTTTGTCAAAA 57.620 34.783 6.65 6.65 35.94 2.44
3447 3706 4.436317 CGAACGAACCTCAGTTTTGTCAAA 60.436 41.667 0.00 0.00 35.94 2.69
3448 3707 3.062909 CGAACGAACCTCAGTTTTGTCAA 59.937 43.478 0.00 0.00 35.94 3.18
3449 3708 2.605818 CGAACGAACCTCAGTTTTGTCA 59.394 45.455 0.00 0.00 35.94 3.58
3450 3709 2.606272 ACGAACGAACCTCAGTTTTGTC 59.394 45.455 0.14 0.00 35.94 3.18
3451 3710 2.350498 CACGAACGAACCTCAGTTTTGT 59.650 45.455 0.14 0.00 35.94 2.83
3452 3711 2.849502 GCACGAACGAACCTCAGTTTTG 60.850 50.000 0.14 0.00 35.94 2.44
3453 3712 1.329599 GCACGAACGAACCTCAGTTTT 59.670 47.619 0.14 0.00 35.94 2.43
3454 3713 0.935196 GCACGAACGAACCTCAGTTT 59.065 50.000 0.14 0.00 35.94 2.66
3455 3714 1.213094 CGCACGAACGAACCTCAGTT 61.213 55.000 0.14 0.00 39.54 3.16
3456 3715 1.660575 CGCACGAACGAACCTCAGT 60.661 57.895 0.14 0.00 34.06 3.41
3457 3716 1.660575 ACGCACGAACGAACCTCAG 60.661 57.895 8.71 0.00 36.70 3.35
3458 3717 1.947146 CACGCACGAACGAACCTCA 60.947 57.895 8.71 0.00 36.70 3.86
3459 3718 1.947642 ACACGCACGAACGAACCTC 60.948 57.895 8.71 0.00 36.70 3.85
3460 3719 2.105528 ACACGCACGAACGAACCT 59.894 55.556 8.71 0.00 36.70 3.50
3461 3720 2.244382 CACACGCACGAACGAACC 59.756 61.111 8.71 0.00 36.70 3.62
3462 3721 2.423039 GCACACGCACGAACGAAC 60.423 61.111 8.71 0.00 38.36 3.95
3463 3722 3.978764 CGCACACGCACGAACGAA 61.979 61.111 8.71 0.00 38.40 3.85
3473 3732 1.004610 CCAAGATTAGATGCGCACACG 60.005 52.381 14.90 0.00 44.07 4.49
3474 3733 1.268234 GCCAAGATTAGATGCGCACAC 60.268 52.381 14.90 10.70 0.00 3.82
3475 3734 1.016627 GCCAAGATTAGATGCGCACA 58.983 50.000 14.90 0.00 0.00 4.57
3476 3735 0.041839 CGCCAAGATTAGATGCGCAC 60.042 55.000 14.90 7.11 38.69 5.34
3477 3736 2.310309 CGCCAAGATTAGATGCGCA 58.690 52.632 14.96 14.96 38.69 6.09
3480 3739 5.880341 ACTTTTTACGCCAAGATTAGATGC 58.120 37.500 0.00 0.00 0.00 3.91
3481 3740 9.834628 TTTTACTTTTTACGCCAAGATTAGATG 57.165 29.630 0.00 0.00 0.00 2.90
3483 3742 9.275398 TCTTTTACTTTTTACGCCAAGATTAGA 57.725 29.630 0.00 0.00 0.00 2.10
3484 3743 9.543018 CTCTTTTACTTTTTACGCCAAGATTAG 57.457 33.333 0.00 0.00 0.00 1.73
3485 3744 8.019094 GCTCTTTTACTTTTTACGCCAAGATTA 58.981 33.333 0.00 0.00 0.00 1.75
3486 3745 6.861572 GCTCTTTTACTTTTTACGCCAAGATT 59.138 34.615 0.00 0.00 0.00 2.40
3487 3746 6.379386 GCTCTTTTACTTTTTACGCCAAGAT 58.621 36.000 0.00 0.00 0.00 2.40
3488 3747 5.559417 CGCTCTTTTACTTTTTACGCCAAGA 60.559 40.000 0.00 0.00 0.00 3.02
3489 3748 4.611366 CGCTCTTTTACTTTTTACGCCAAG 59.389 41.667 0.00 0.00 0.00 3.61
3490 3749 4.529446 CGCTCTTTTACTTTTTACGCCAA 58.471 39.130 0.00 0.00 0.00 4.52
3491 3750 3.058777 CCGCTCTTTTACTTTTTACGCCA 60.059 43.478 0.00 0.00 0.00 5.69
3492 3751 3.485633 CCGCTCTTTTACTTTTTACGCC 58.514 45.455 0.00 0.00 0.00 5.68
3493 3752 2.906776 GCCGCTCTTTTACTTTTTACGC 59.093 45.455 0.00 0.00 0.00 4.42
3494 3753 4.136517 TGCCGCTCTTTTACTTTTTACG 57.863 40.909 0.00 0.00 0.00 3.18
3495 3754 4.678287 GGTTGCCGCTCTTTTACTTTTTAC 59.322 41.667 0.00 0.00 0.00 2.01
3496 3755 4.338682 TGGTTGCCGCTCTTTTACTTTTTA 59.661 37.500 0.00 0.00 0.00 1.52
3497 3756 3.131400 TGGTTGCCGCTCTTTTACTTTTT 59.869 39.130 0.00 0.00 0.00 1.94
3498 3757 2.691011 TGGTTGCCGCTCTTTTACTTTT 59.309 40.909 0.00 0.00 0.00 2.27
3499 3758 2.303175 TGGTTGCCGCTCTTTTACTTT 58.697 42.857 0.00 0.00 0.00 2.66
3500 3759 1.975660 TGGTTGCCGCTCTTTTACTT 58.024 45.000 0.00 0.00 0.00 2.24
3501 3760 1.975660 TTGGTTGCCGCTCTTTTACT 58.024 45.000 0.00 0.00 0.00 2.24
3502 3761 3.297830 AATTGGTTGCCGCTCTTTTAC 57.702 42.857 0.00 0.00 0.00 2.01
3503 3762 3.068873 ACAAATTGGTTGCCGCTCTTTTA 59.931 39.130 0.00 0.00 41.31 1.52
3504 3763 2.158971 ACAAATTGGTTGCCGCTCTTTT 60.159 40.909 0.00 0.00 41.31 2.27
3505 3764 1.412343 ACAAATTGGTTGCCGCTCTTT 59.588 42.857 0.00 0.00 41.31 2.52
3506 3765 1.039856 ACAAATTGGTTGCCGCTCTT 58.960 45.000 0.00 0.00 41.31 2.85
3507 3766 1.039856 AACAAATTGGTTGCCGCTCT 58.960 45.000 0.00 0.00 41.31 4.09
3508 3767 1.139163 CAACAAATTGGTTGCCGCTC 58.861 50.000 12.70 0.00 41.37 5.03
3509 3768 3.287482 CAACAAATTGGTTGCCGCT 57.713 47.368 12.70 0.00 41.37 5.52
3515 3774 5.195001 AGATACGCAACAACAAATTGGTT 57.805 34.783 0.00 0.00 40.42 3.67
3516 3775 4.846779 AGATACGCAACAACAAATTGGT 57.153 36.364 0.00 0.00 40.42 3.67
3517 3776 7.250569 AGATTAGATACGCAACAACAAATTGG 58.749 34.615 0.00 0.00 40.42 3.16
3518 3777 8.673626 AAGATTAGATACGCAACAACAAATTG 57.326 30.769 0.00 0.00 41.98 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.