Multiple sequence alignment - TraesCS2D01G350300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G350300 chr2D 100.000 7696 0 0 1 7696 448144543 448136848 0.000000e+00 14212.0
1 TraesCS2D01G350300 chr2D 98.441 449 7 0 81 529 540972245 540972693 0.000000e+00 791.0
2 TraesCS2D01G350300 chr2D 89.447 199 17 4 3849 4044 609761028 609760831 1.660000e-61 248.0
3 TraesCS2D01G350300 chr2D 100.000 48 0 0 1 48 540972199 540972246 1.060000e-13 89.8
4 TraesCS2D01G350300 chr2A 96.412 2787 60 16 3311 6069 592782895 592780121 0.000000e+00 4556.0
5 TraesCS2D01G350300 chr2A 94.918 1771 55 11 1569 3320 592784692 592782938 0.000000e+00 2739.0
6 TraesCS2D01G350300 chr2A 95.497 866 24 6 706 1568 592785593 592784740 0.000000e+00 1369.0
7 TraesCS2D01G350300 chr2A 97.393 652 12 3 6438 7086 592780109 592779460 0.000000e+00 1105.0
8 TraesCS2D01G350300 chr2A 88.889 207 18 5 3843 4047 388485996 388485793 4.610000e-62 250.0
9 TraesCS2D01G350300 chr2A 96.377 138 5 0 6304 6441 494946811 494946674 2.160000e-55 228.0
10 TraesCS2D01G350300 chr2A 84.375 224 30 4 7380 7601 592779258 592779038 1.680000e-51 215.0
11 TraesCS2D01G350300 chr2A 93.382 136 7 2 6068 6201 185990140 185990275 4.710000e-47 200.0
12 TraesCS2D01G350300 chr2A 89.764 127 10 1 583 709 592785796 592785673 7.990000e-35 159.0
13 TraesCS2D01G350300 chr2A 91.525 59 3 2 2986 3042 89165448 89165390 6.400000e-11 80.5
14 TraesCS2D01G350300 chr2B 95.482 2789 67 28 3311 6069 527886654 527883895 0.000000e+00 4397.0
15 TraesCS2D01G350300 chr2B 94.689 1770 61 11 1569 3320 527888451 527886697 0.000000e+00 2717.0
16 TraesCS2D01G350300 chr2B 92.798 972 39 12 603 1568 527889445 527888499 0.000000e+00 1378.0
17 TraesCS2D01G350300 chr2B 95.519 781 28 4 6438 7211 527883883 527883103 0.000000e+00 1242.0
18 TraesCS2D01G350300 chr2B 91.339 381 28 5 7316 7694 527882255 527881878 4.120000e-142 516.0
19 TraesCS2D01G350300 chr2B 95.238 42 2 0 7273 7314 527882999 527882958 4.980000e-07 67.6
20 TraesCS2D01G350300 chr7B 93.809 533 32 1 1 533 20032404 20032935 0.000000e+00 800.0
21 TraesCS2D01G350300 chr7B 74.122 541 125 15 1 533 576926427 576926960 7.830000e-50 209.0
22 TraesCS2D01G350300 chr7B 74.052 501 114 16 34 526 597456207 597455715 2.830000e-44 191.0
23 TraesCS2D01G350300 chr7B 84.672 137 13 7 2911 3042 72238825 72238692 6.270000e-26 130.0
24 TraesCS2D01G350300 chr4A 86.717 527 59 5 2 528 620938968 620938453 6.700000e-160 575.0
25 TraesCS2D01G350300 chr4A 92.647 136 8 2 6068 6201 557403926 557403791 2.190000e-45 195.0
26 TraesCS2D01G350300 chr4A 97.273 110 3 0 6197 6306 548344071 548344180 3.670000e-43 187.0
27 TraesCS2D01G350300 chr7A 85.567 388 50 6 6068 6453 646763061 646763444 1.200000e-107 401.0
28 TraesCS2D01G350300 chr7A 90.686 204 15 3 3843 4044 478160240 478160039 1.270000e-67 268.0
29 TraesCS2D01G350300 chr7A 96.403 139 5 0 6304 6442 736127401 736127539 6.010000e-56 230.0
30 TraesCS2D01G350300 chr7A 93.388 121 6 2 6191 6311 126137174 126137292 2.210000e-40 178.0
31 TraesCS2D01G350300 chr5D 91.262 206 15 3 3843 4047 322989740 322989537 2.120000e-70 278.0
32 TraesCS2D01G350300 chr5D 82.039 206 30 7 3851 4051 537752483 537752280 1.330000e-37 169.0
33 TraesCS2D01G350300 chr7D 90.640 203 13 5 3843 4044 416148681 416148484 1.650000e-66 265.0
34 TraesCS2D01G350300 chr7D 97.037 135 4 0 6304 6438 321313865 321313731 2.160000e-55 228.0
35 TraesCS2D01G350300 chr7D 95.745 141 4 2 6304 6444 137612765 137612903 7.770000e-55 226.0
36 TraesCS2D01G350300 chr7D 92.647 136 8 2 6068 6201 137612632 137612767 2.190000e-45 195.0
37 TraesCS2D01G350300 chr7D 99.065 107 1 0 6200 6306 201981103 201981209 7.880000e-45 193.0
38 TraesCS2D01G350300 chr7D 85.401 137 12 7 2911 3042 112430077 112429944 1.350000e-27 135.0
39 TraesCS2D01G350300 chr6D 89.952 209 16 4 3845 4051 27788583 27788788 1.650000e-66 265.0
40 TraesCS2D01G350300 chr6D 92.029 138 9 2 6068 6203 193622916 193623053 7.880000e-45 193.0
41 TraesCS2D01G350300 chr6D 85.417 144 20 1 3898 4041 90190144 90190286 1.730000e-31 148.0
42 TraesCS2D01G350300 chr6D 82.993 147 11 4 3898 4044 435774183 435774315 3.770000e-23 121.0
43 TraesCS2D01G350300 chr6D 82.993 147 11 4 3898 4044 435792422 435792554 3.770000e-23 121.0
44 TraesCS2D01G350300 chr6D 77.931 145 24 6 7394 7531 133289804 133289947 4.950000e-12 84.2
45 TraesCS2D01G350300 chr3D 82.253 293 52 0 236 528 157441304 157441012 3.560000e-63 254.0
46 TraesCS2D01G350300 chr3D 96.377 138 5 0 6304 6441 144330112 144330249 2.160000e-55 228.0
47 TraesCS2D01G350300 chr3D 90.000 160 13 2 3885 4044 71530906 71531062 3.640000e-48 204.0
48 TraesCS2D01G350300 chr3D 92.647 136 8 2 6068 6201 206620525 206620660 2.190000e-45 195.0
49 TraesCS2D01G350300 chr3D 87.013 77 8 1 2968 3042 469482469 469482393 1.380000e-12 86.1
50 TraesCS2D01G350300 chr3D 97.436 39 1 0 541 579 143060072 143060110 4.980000e-07 67.6
51 TraesCS2D01G350300 chr6B 89.109 202 21 1 3843 4044 111124318 111124518 4.610000e-62 250.0
52 TraesCS2D01G350300 chr6B 89.796 196 17 3 3851 4044 695950554 695950748 1.660000e-61 248.0
53 TraesCS2D01G350300 chr6B 95.690 116 4 1 6195 6309 195807169 195807054 1.320000e-42 185.0
54 TraesCS2D01G350300 chr6A 96.403 139 5 0 6304 6442 219445590 219445728 6.010000e-56 230.0
55 TraesCS2D01G350300 chr6A 90.909 132 8 4 6175 6306 535140236 535140109 2.850000e-39 174.0
56 TraesCS2D01G350300 chrUn 95.745 141 4 2 6304 6444 91678960 91679098 7.770000e-55 226.0
57 TraesCS2D01G350300 chrUn 93.382 136 7 2 6068 6201 91678827 91678962 4.710000e-47 200.0
58 TraesCS2D01G350300 chrUn 93.600 125 6 2 6197 6320 77508815 77508692 1.320000e-42 185.0
59 TraesCS2D01G350300 chr3B 96.350 137 4 1 6304 6440 525439207 525439072 2.790000e-54 224.0
60 TraesCS2D01G350300 chr3B 92.105 76 5 1 2968 3042 623827066 623826991 1.060000e-18 106.0
61 TraesCS2D01G350300 chr3A 94.118 136 6 2 6068 6201 627821282 627821417 1.010000e-48 206.0
62 TraesCS2D01G350300 chr1B 93.382 136 6 3 6068 6201 313272560 313272694 1.690000e-46 198.0
63 TraesCS2D01G350300 chr4B 93.077 130 6 3 6188 6315 78607074 78606946 3.670000e-43 187.0
64 TraesCS2D01G350300 chr4B 97.436 39 1 0 541 579 427071835 427071873 4.980000e-07 67.6
65 TraesCS2D01G350300 chr1A 89.796 147 14 1 3898 4044 548569254 548569399 3.670000e-43 187.0
66 TraesCS2D01G350300 chr1A 87.755 147 13 3 3900 4042 74430803 74430658 4.780000e-37 167.0
67 TraesCS2D01G350300 chr1A 85.256 156 21 2 3895 4049 557879342 557879188 7.990000e-35 159.0
68 TraesCS2D01G350300 chr1A 95.455 66 3 0 465 530 312771076 312771141 1.060000e-18 106.0
69 TraesCS2D01G350300 chr5B 94.872 117 6 0 6200 6316 336136505 336136389 4.740000e-42 183.0
70 TraesCS2D01G350300 chr1D 80.097 206 29 11 3843 4042 381977272 381977073 8.050000e-30 143.0
71 TraesCS2D01G350300 chr1D 94.382 89 5 0 3956 4044 29961394 29961482 3.750000e-28 137.0
72 TraesCS2D01G350300 chr4D 79.343 213 22 17 3843 4044 14575873 14575672 6.270000e-26 130.0
73 TraesCS2D01G350300 chr4D 88.235 102 5 3 3956 4051 14575825 14575925 1.750000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G350300 chr2D 448136848 448144543 7695 True 14212.0 14212 100.000000 1 7696 1 chr2D.!!$R1 7695
1 TraesCS2D01G350300 chr2A 592779038 592785796 6758 True 1690.5 4556 93.059833 583 7601 6 chr2A.!!$R4 7018
2 TraesCS2D01G350300 chr2B 527881878 527889445 7567 True 1719.6 4397 94.177500 603 7694 6 chr2B.!!$R1 7091
3 TraesCS2D01G350300 chr7B 20032404 20032935 531 False 800.0 800 93.809000 1 533 1 chr7B.!!$F1 532
4 TraesCS2D01G350300 chr7B 576926427 576926960 533 False 209.0 209 74.122000 1 533 1 chr7B.!!$F2 532
5 TraesCS2D01G350300 chr4A 620938453 620938968 515 True 575.0 575 86.717000 2 528 1 chr4A.!!$R2 526

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
904 990 0.249073 CATCCACTCGTAGCGGGAAG 60.249 60.000 0.00 0.0 32.25 3.46 F
905 991 0.395311 ATCCACTCGTAGCGGGAAGA 60.395 55.000 0.00 0.0 32.25 2.87 F
906 992 1.030488 TCCACTCGTAGCGGGAAGAG 61.030 60.000 0.00 0.0 36.83 2.85 F
907 993 1.433879 CACTCGTAGCGGGAAGAGG 59.566 63.158 0.00 0.0 35.22 3.69 F
908 994 1.030488 CACTCGTAGCGGGAAGAGGA 61.030 60.000 0.00 0.0 35.22 3.71 F
2852 3005 0.671251 GCGTAGAGGATAGCAGCAGT 59.329 55.000 0.00 0.0 0.00 4.40 F
4145 4375 0.933097 CATGGCAGCTGTACACGATC 59.067 55.000 16.64 0.0 0.00 3.69 F
6100 6338 0.097674 GATTGGAGTGTCATGCGCAC 59.902 55.000 14.90 0.0 37.13 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2078 2214 0.671472 GCTGGCATTTCCCAACTTGC 60.671 55.000 0.00 0.0 33.73 4.01 R
2437 2582 0.865111 CAACGCAACATTGGAGACGA 59.135 50.000 0.00 0.0 0.00 4.20 R
2585 2738 1.410882 GGATGAGGAGAGAAGGAACCG 59.589 57.143 0.00 0.0 0.00 4.44 R
2852 3005 1.459348 TCCCTGTCACCTGTCAGCA 60.459 57.895 0.00 0.0 31.40 4.41 R
3110 3263 0.036732 TGGAGCAGGCAATTCGAAGT 59.963 50.000 3.35 0.0 0.00 3.01 R
4757 4988 1.412710 TCTCACCGGCATATGAAGGAC 59.587 52.381 19.62 0.0 0.00 3.85 R
6196 6434 0.033796 TCCGAACGGAGGGAGTACAT 60.034 55.000 12.04 0.0 39.76 2.29 R
7097 7342 0.389391 ATCCGACCCAAGACATAGCG 59.611 55.000 0.00 0.0 0.00 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
121 122 2.594592 GCACAGGGCAGGTCGTTT 60.595 61.111 0.00 0.00 43.97 3.60
205 206 0.320374 AGCGGCAGTAACTACAGCAA 59.680 50.000 1.45 0.00 40.04 3.91
207 208 1.790755 CGGCAGTAACTACAGCAACA 58.209 50.000 6.59 0.00 40.04 3.33
221 222 1.302285 CAACAGAGCTGGGAGCCAT 59.698 57.895 0.00 0.00 43.77 4.40
369 370 3.739519 GCTGGAGTGTTAGCTCATGTAGG 60.740 52.174 0.00 0.00 37.24 3.18
386 387 2.035442 GGCGAACCCTGAACTCTGC 61.035 63.158 0.00 0.00 0.00 4.26
417 418 2.096980 GCTAGCCCAAATCGGTTGTAAC 59.903 50.000 2.29 0.00 35.23 2.50
418 419 2.279935 AGCCCAAATCGGTTGTAACA 57.720 45.000 0.00 0.00 35.23 2.41
477 478 3.860681 CCCAAAGTGGCTGCTTGT 58.139 55.556 0.00 0.00 35.79 3.16
573 574 5.613358 GTTCCAGACCAAACTATTCACAG 57.387 43.478 0.00 0.00 0.00 3.66
574 575 4.286297 TCCAGACCAAACTATTCACAGG 57.714 45.455 0.00 0.00 0.00 4.00
575 576 3.650942 TCCAGACCAAACTATTCACAGGT 59.349 43.478 0.00 0.00 0.00 4.00
576 577 4.104102 TCCAGACCAAACTATTCACAGGTT 59.896 41.667 0.00 0.00 0.00 3.50
577 578 4.827284 CCAGACCAAACTATTCACAGGTTT 59.173 41.667 0.00 0.00 34.10 3.27
578 579 6.001460 CCAGACCAAACTATTCACAGGTTTA 58.999 40.000 0.00 0.00 32.80 2.01
579 580 6.659242 CCAGACCAAACTATTCACAGGTTTAT 59.341 38.462 0.00 0.00 32.80 1.40
580 581 7.148239 CCAGACCAAACTATTCACAGGTTTATC 60.148 40.741 0.00 0.00 32.80 1.75
581 582 6.884836 AGACCAAACTATTCACAGGTTTATCC 59.115 38.462 0.00 0.00 32.80 2.59
654 655 9.959721 TCAATAAGCAATTAATATCCTACCTCC 57.040 33.333 0.00 0.00 0.00 4.30
665 666 3.619900 TCCTACCTCCTATCAGCATGT 57.380 47.619 0.00 0.00 37.40 3.21
744 829 3.702045 CACTGGTTTTACACCCCAAAAGA 59.298 43.478 0.00 0.00 46.68 2.52
904 990 0.249073 CATCCACTCGTAGCGGGAAG 60.249 60.000 0.00 0.00 32.25 3.46
905 991 0.395311 ATCCACTCGTAGCGGGAAGA 60.395 55.000 0.00 0.00 32.25 2.87
906 992 1.030488 TCCACTCGTAGCGGGAAGAG 61.030 60.000 0.00 0.00 36.83 2.85
907 993 1.433879 CACTCGTAGCGGGAAGAGG 59.566 63.158 0.00 0.00 35.22 3.69
908 994 1.030488 CACTCGTAGCGGGAAGAGGA 61.030 60.000 0.00 0.00 35.22 3.71
1263 1349 5.736951 TTTGGGATTTCGTCAATTTGGAT 57.263 34.783 0.00 0.00 0.00 3.41
1268 1354 3.848272 TTTCGTCAATTTGGATGAGGC 57.152 42.857 0.00 0.00 34.50 4.70
1322 1408 6.147581 TGTGGCTATAATTCGTCGATAACTC 58.852 40.000 0.00 0.00 0.00 3.01
1344 1430 7.091443 ACTCTGAGAATTAAGTAGGTTCGTTG 58.909 38.462 12.44 0.00 0.00 4.10
1373 1459 3.412386 GTGGAGATTACAAGTTGCCACT 58.588 45.455 16.43 6.52 40.73 4.00
1456 1542 7.041372 TGCTTCTTCTTGAAATGTTAGTGGTAC 60.041 37.037 0.00 0.00 33.79 3.34
1461 1547 6.001460 TCTTGAAATGTTAGTGGTACTTGGG 58.999 40.000 0.00 0.00 0.00 4.12
1483 1569 5.357878 GGGCATGTGAATAATGTTCTCAGAA 59.642 40.000 0.00 0.00 0.00 3.02
1484 1570 6.040166 GGGCATGTGAATAATGTTCTCAGAAT 59.960 38.462 0.00 0.00 0.00 2.40
1485 1571 7.229306 GGGCATGTGAATAATGTTCTCAGAATA 59.771 37.037 0.00 0.00 0.00 1.75
1486 1572 8.790718 GGCATGTGAATAATGTTCTCAGAATAT 58.209 33.333 0.00 0.00 0.00 1.28
1565 1651 5.574055 ACACGGTATATTACGCCATTATTCG 59.426 40.000 0.00 0.00 0.00 3.34
1701 1837 5.451798 CCATAGTTTTTGCACCTCACAGTTT 60.452 40.000 0.00 0.00 0.00 2.66
1702 1838 4.535526 AGTTTTTGCACCTCACAGTTTT 57.464 36.364 0.00 0.00 0.00 2.43
1716 1852 6.127897 CCTCACAGTTTTATTGATGTTCCTCC 60.128 42.308 0.00 0.00 0.00 4.30
1879 2015 8.583810 CACCTTTTGCATTTCTATTATCATGG 57.416 34.615 0.00 0.00 0.00 3.66
1880 2016 8.199449 CACCTTTTGCATTTCTATTATCATGGT 58.801 33.333 0.00 0.00 0.00 3.55
1881 2017 9.420118 ACCTTTTGCATTTCTATTATCATGGTA 57.580 29.630 0.00 0.00 0.00 3.25
1882 2018 9.683069 CCTTTTGCATTTCTATTATCATGGTAC 57.317 33.333 0.00 0.00 0.00 3.34
2078 2214 6.073058 TGCAACTAGAAAAATCAGTGCTGTAG 60.073 38.462 0.00 0.00 0.00 2.74
2192 2337 6.127786 CCCAAAGGAAGAAATCTGCTCTAAAG 60.128 42.308 0.00 0.00 33.47 1.85
2193 2338 6.656693 CCAAAGGAAGAAATCTGCTCTAAAGA 59.343 38.462 0.00 0.00 0.00 2.52
2348 2493 7.337184 TCCATTTTATAAACGCAAGGATGTACA 59.663 33.333 0.00 0.00 46.39 2.90
2364 2509 5.291128 GGATGTACACTCCTTTCACGTATTG 59.709 44.000 13.85 0.00 0.00 1.90
2372 2517 4.556233 TCCTTTCACGTATTGACAGAGTG 58.444 43.478 0.00 0.00 34.35 3.51
2437 2582 7.852263 AGTGTCCAGTATTTAGCTTGTTAGAT 58.148 34.615 0.00 0.00 0.00 1.98
2439 2584 6.978659 TGTCCAGTATTTAGCTTGTTAGATCG 59.021 38.462 0.00 0.00 0.00 3.69
2494 2647 8.599792 ACAATTGGAATCATTGAGATTTTTCCT 58.400 29.630 10.83 0.00 46.76 3.36
2559 2712 3.696281 AGAAAACGGTAACAAAACGGG 57.304 42.857 0.00 0.00 0.00 5.28
2585 2738 1.186200 GCATGTTTTCTTCCCCCTCC 58.814 55.000 0.00 0.00 0.00 4.30
2682 2835 4.771577 TGCTAGCCCAAAAATGAAATCTCA 59.228 37.500 13.29 0.00 35.56 3.27
2765 2918 9.170734 GTTTTAATTCGTAAACCCTATCTTCCT 57.829 33.333 0.00 0.00 31.22 3.36
2824 2977 2.673775 TGTTGATGGGAAAGGCAAGA 57.326 45.000 0.00 0.00 0.00 3.02
2852 3005 0.671251 GCGTAGAGGATAGCAGCAGT 59.329 55.000 0.00 0.00 0.00 4.40
2909 3062 5.127491 TGTAAAGAAACTCGACCAACCAAT 58.873 37.500 0.00 0.00 0.00 3.16
3110 3263 2.218603 GTTCGACTTCAAGCTTTCCCA 58.781 47.619 0.00 0.00 0.00 4.37
3118 3271 3.140325 TCAAGCTTTCCCACTTCGAAT 57.860 42.857 0.00 0.00 0.00 3.34
3193 3346 1.876156 CTTTCCTGCAACACTGGAGAC 59.124 52.381 0.00 0.00 46.05 3.36
3265 3419 9.743057 TGGAACTTGTTCTATTTTGTACAAATG 57.257 29.630 21.17 14.10 30.87 2.32
3287 3441 1.846439 AGCCTGGCCTTTGCTCTATTA 59.154 47.619 16.57 0.00 37.74 0.98
3383 3591 9.308000 TGTGACCCTAATTTTGACTATGAATTT 57.692 29.630 0.00 0.00 0.00 1.82
3716 3945 5.918608 ACTTAGACATAAGGTATGCTGGTG 58.081 41.667 0.57 0.00 42.38 4.17
3829 4058 4.074970 AGTTATCCTGTCACAAAGCAAGG 58.925 43.478 0.00 0.00 0.00 3.61
3839 4069 4.919754 GTCACAAAGCAAGGAATAAGCAAG 59.080 41.667 0.00 0.00 0.00 4.01
3841 4071 3.259123 ACAAAGCAAGGAATAAGCAAGGG 59.741 43.478 0.00 0.00 0.00 3.95
3858 4088 1.762370 AGGGTTTTCCACTTTGGCAAG 59.238 47.619 0.00 0.00 42.91 4.01
3864 4094 2.071778 TCCACTTTGGCAAGAAAGCT 57.928 45.000 0.00 0.00 37.47 3.74
4044 4274 2.811101 CGCAAACAAACAGGGCCA 59.189 55.556 6.18 0.00 0.00 5.36
4145 4375 0.933097 CATGGCAGCTGTACACGATC 59.067 55.000 16.64 0.00 0.00 3.69
4174 4404 6.340522 AGCTAATGCGCCTCATTTAAATTTT 58.659 32.000 4.18 0.00 42.48 1.82
4234 4464 4.914983 AGAAGGTTGCAGATTCTTCATCA 58.085 39.130 16.79 0.00 38.35 3.07
4458 4688 5.746990 ACCTGCTTATATGATGTAGGACC 57.253 43.478 12.73 0.00 37.29 4.46
4530 4760 6.594744 TCATATTAGCCATCAACTGACATGT 58.405 36.000 0.00 0.00 0.00 3.21
4531 4761 7.056006 TCATATTAGCCATCAACTGACATGTT 58.944 34.615 0.00 0.00 0.00 2.71
4532 4762 7.557358 TCATATTAGCCATCAACTGACATGTTT 59.443 33.333 0.00 0.00 0.00 2.83
4533 4763 6.594788 ATTAGCCATCAACTGACATGTTTT 57.405 33.333 0.00 0.00 0.00 2.43
4534 4764 4.942761 AGCCATCAACTGACATGTTTTT 57.057 36.364 0.00 0.00 0.00 1.94
4741 4972 6.539103 TCATATCTTAGATACAGATCCGTCCG 59.461 42.308 3.83 0.00 32.94 4.79
4757 4988 2.786578 CGTCCGTTGAACAAAAATGTGG 59.213 45.455 0.00 0.00 0.00 4.17
4875 5106 6.591935 ACTGGAGTTGTGTTTCTAGATTCAA 58.408 36.000 0.00 0.00 0.00 2.69
5281 5512 7.272244 CCCAGGTTTTAAGTCAAATTTCAACT 58.728 34.615 0.00 0.00 0.00 3.16
5317 5548 8.188531 CCATGCAGGTATCATTTTAAAACTTG 57.811 34.615 1.97 0.00 0.00 3.16
5351 5582 4.766373 TGGTGATGATTTATGCACACTTGT 59.234 37.500 0.00 0.00 33.09 3.16
5569 5800 6.982852 AGTATTGATCCGGTAACATACTCAG 58.017 40.000 0.00 0.00 0.00 3.35
5734 5967 8.730680 ACTTTTATCAGTAGGCACAGTAATTTG 58.269 33.333 0.00 0.00 0.00 2.32
5738 5971 9.542462 TTATCAGTAGGCACAGTAATTTGTATC 57.458 33.333 0.00 0.00 0.00 2.24
5741 5974 5.810587 AGTAGGCACAGTAATTTGTATCACG 59.189 40.000 0.00 0.00 0.00 4.35
5796 6029 1.086696 ATTCTTCCGACATTGGCACG 58.913 50.000 0.00 0.00 0.00 5.34
5800 6033 1.225376 TTCCGACATTGGCACGTCAC 61.225 55.000 14.59 0.00 32.24 3.67
6061 6299 2.355756 CCCGTCAAGATGCCAATACTTG 59.644 50.000 0.00 0.00 41.27 3.16
6069 6307 9.440773 GTCAAGATGCCAATACTTGATCATATA 57.559 33.333 0.00 0.00 46.97 0.86
6070 6308 9.662947 TCAAGATGCCAATACTTGATCATATAG 57.337 33.333 0.00 0.00 42.91 1.31
6095 6333 9.347240 AGAAAAATATAGGATTGGAGTGTCATG 57.653 33.333 0.00 0.00 0.00 3.07
6096 6334 7.516198 AAAATATAGGATTGGAGTGTCATGC 57.484 36.000 0.00 0.00 0.00 4.06
6097 6335 2.602257 TAGGATTGGAGTGTCATGCG 57.398 50.000 0.00 0.00 0.00 4.73
6098 6336 0.745845 AGGATTGGAGTGTCATGCGC 60.746 55.000 0.00 0.00 0.00 6.09
6099 6337 1.026182 GGATTGGAGTGTCATGCGCA 61.026 55.000 14.96 14.96 0.00 6.09
6100 6338 0.097674 GATTGGAGTGTCATGCGCAC 59.902 55.000 14.90 0.00 37.13 5.34
6102 6340 0.534877 TTGGAGTGTCATGCGCACTT 60.535 50.000 14.90 0.00 45.99 3.16
6103 6341 1.229975 TGGAGTGTCATGCGCACTTG 61.230 55.000 14.90 8.85 45.99 3.16
6104 6342 0.950555 GGAGTGTCATGCGCACTTGA 60.951 55.000 14.90 11.72 45.99 3.02
6105 6343 0.867746 GAGTGTCATGCGCACTTGAA 59.132 50.000 14.90 1.99 45.99 2.69
6106 6344 1.466167 GAGTGTCATGCGCACTTGAAT 59.534 47.619 14.90 3.13 45.99 2.57
6107 6345 1.466167 AGTGTCATGCGCACTTGAATC 59.534 47.619 14.90 10.14 43.87 2.52
6108 6346 0.804364 TGTCATGCGCACTTGAATCC 59.196 50.000 14.90 2.47 32.30 3.01
6109 6347 1.089920 GTCATGCGCACTTGAATCCT 58.910 50.000 14.90 0.00 32.30 3.24
6110 6348 2.279741 GTCATGCGCACTTGAATCCTA 58.720 47.619 14.90 0.00 32.30 2.94
6111 6349 2.874701 GTCATGCGCACTTGAATCCTAT 59.125 45.455 14.90 0.00 32.30 2.57
6112 6350 4.058124 GTCATGCGCACTTGAATCCTATA 58.942 43.478 14.90 0.00 32.30 1.31
6113 6351 4.151335 GTCATGCGCACTTGAATCCTATAG 59.849 45.833 14.90 0.00 32.30 1.31
6114 6352 3.111853 TGCGCACTTGAATCCTATAGG 57.888 47.619 13.07 13.07 0.00 2.57
6129 6367 5.716979 TCCTATAGGATTAGCAAGGAGTGT 58.283 41.667 18.00 0.00 39.78 3.55
6130 6368 6.143915 TCCTATAGGATTAGCAAGGAGTGTT 58.856 40.000 18.00 0.00 39.78 3.32
6131 6369 6.615726 TCCTATAGGATTAGCAAGGAGTGTTT 59.384 38.462 18.00 0.00 39.78 2.83
6132 6370 6.708054 CCTATAGGATTAGCAAGGAGTGTTTG 59.292 42.308 14.11 0.00 37.39 2.93
6133 6371 4.640771 AGGATTAGCAAGGAGTGTTTGA 57.359 40.909 0.00 0.00 0.00 2.69
6134 6372 5.184892 AGGATTAGCAAGGAGTGTTTGAT 57.815 39.130 0.00 0.00 0.00 2.57
6135 6373 5.574188 AGGATTAGCAAGGAGTGTTTGATT 58.426 37.500 0.00 0.00 0.00 2.57
6136 6374 6.012745 AGGATTAGCAAGGAGTGTTTGATTT 58.987 36.000 0.00 0.00 0.00 2.17
6137 6375 6.151817 AGGATTAGCAAGGAGTGTTTGATTTC 59.848 38.462 0.00 0.00 0.00 2.17
6138 6376 6.071952 GGATTAGCAAGGAGTGTTTGATTTCA 60.072 38.462 0.00 0.00 0.00 2.69
6139 6377 4.574599 AGCAAGGAGTGTTTGATTTCAC 57.425 40.909 0.00 0.00 35.13 3.18
6140 6378 3.003689 AGCAAGGAGTGTTTGATTTCACG 59.996 43.478 0.00 0.00 39.25 4.35
6141 6379 3.003275 GCAAGGAGTGTTTGATTTCACGA 59.997 43.478 0.00 0.00 39.25 4.35
6142 6380 4.776743 CAAGGAGTGTTTGATTTCACGAG 58.223 43.478 0.00 0.00 39.25 4.18
6143 6381 4.336889 AGGAGTGTTTGATTTCACGAGA 57.663 40.909 0.00 0.00 39.25 4.04
6144 6382 4.703897 AGGAGTGTTTGATTTCACGAGAA 58.296 39.130 0.00 0.00 39.25 2.87
6145 6383 5.123227 AGGAGTGTTTGATTTCACGAGAAA 58.877 37.500 10.46 10.46 46.90 2.52
6146 6384 5.588648 AGGAGTGTTTGATTTCACGAGAAAA 59.411 36.000 12.02 0.00 46.06 2.29
6147 6385 5.909610 GGAGTGTTTGATTTCACGAGAAAAG 59.090 40.000 12.02 0.00 46.06 2.27
6148 6386 5.273944 AGTGTTTGATTTCACGAGAAAAGC 58.726 37.500 12.02 8.07 46.06 3.51
6149 6387 4.144731 GTGTTTGATTTCACGAGAAAAGCG 59.855 41.667 12.02 0.00 46.06 4.68
6150 6388 4.034626 TGTTTGATTTCACGAGAAAAGCGA 59.965 37.500 12.02 5.04 46.06 4.93
6151 6389 4.804608 TTGATTTCACGAGAAAAGCGAA 57.195 36.364 12.02 0.94 46.06 4.70
6152 6390 4.389664 TGATTTCACGAGAAAAGCGAAG 57.610 40.909 12.02 0.00 46.06 3.79
6153 6391 3.186409 TGATTTCACGAGAAAAGCGAAGG 59.814 43.478 12.02 0.00 46.06 3.46
6154 6392 2.519377 TTCACGAGAAAAGCGAAGGA 57.481 45.000 0.00 0.00 0.00 3.36
6155 6393 2.519377 TCACGAGAAAAGCGAAGGAA 57.481 45.000 0.00 0.00 0.00 3.36
6156 6394 3.040147 TCACGAGAAAAGCGAAGGAAT 57.960 42.857 0.00 0.00 0.00 3.01
6157 6395 3.399330 TCACGAGAAAAGCGAAGGAATT 58.601 40.909 0.00 0.00 0.00 2.17
6158 6396 3.186409 TCACGAGAAAAGCGAAGGAATTG 59.814 43.478 0.00 0.00 0.00 2.32
6159 6397 3.058914 CACGAGAAAAGCGAAGGAATTGT 60.059 43.478 0.00 0.00 0.00 2.71
6160 6398 4.151689 CACGAGAAAAGCGAAGGAATTGTA 59.848 41.667 0.00 0.00 0.00 2.41
6161 6399 4.753107 ACGAGAAAAGCGAAGGAATTGTAA 59.247 37.500 0.00 0.00 0.00 2.41
6162 6400 5.237779 ACGAGAAAAGCGAAGGAATTGTAAA 59.762 36.000 0.00 0.00 0.00 2.01
6163 6401 6.140110 CGAGAAAAGCGAAGGAATTGTAAAA 58.860 36.000 0.00 0.00 0.00 1.52
6164 6402 6.635239 CGAGAAAAGCGAAGGAATTGTAAAAA 59.365 34.615 0.00 0.00 0.00 1.94
6165 6403 7.149128 CGAGAAAAGCGAAGGAATTGTAAAAAG 60.149 37.037 0.00 0.00 0.00 2.27
6166 6404 7.489160 AGAAAAGCGAAGGAATTGTAAAAAGT 58.511 30.769 0.00 0.00 0.00 2.66
6167 6405 7.435192 AGAAAAGCGAAGGAATTGTAAAAAGTG 59.565 33.333 0.00 0.00 0.00 3.16
6168 6406 5.121221 AGCGAAGGAATTGTAAAAAGTGG 57.879 39.130 0.00 0.00 0.00 4.00
6169 6407 4.583073 AGCGAAGGAATTGTAAAAAGTGGT 59.417 37.500 0.00 0.00 0.00 4.16
6170 6408 5.068591 AGCGAAGGAATTGTAAAAAGTGGTT 59.931 36.000 0.00 0.00 0.00 3.67
6171 6409 5.174943 GCGAAGGAATTGTAAAAAGTGGTTG 59.825 40.000 0.00 0.00 0.00 3.77
6172 6410 5.689961 CGAAGGAATTGTAAAAAGTGGTTGG 59.310 40.000 0.00 0.00 0.00 3.77
6173 6411 6.460399 CGAAGGAATTGTAAAAAGTGGTTGGA 60.460 38.462 0.00 0.00 0.00 3.53
6174 6412 6.405278 AGGAATTGTAAAAAGTGGTTGGAG 57.595 37.500 0.00 0.00 0.00 3.86
6175 6413 5.897250 AGGAATTGTAAAAAGTGGTTGGAGT 59.103 36.000 0.00 0.00 0.00 3.85
6176 6414 5.983118 GGAATTGTAAAAAGTGGTTGGAGTG 59.017 40.000 0.00 0.00 0.00 3.51
6177 6415 4.993029 TTGTAAAAAGTGGTTGGAGTGG 57.007 40.909 0.00 0.00 0.00 4.00
6178 6416 4.237976 TGTAAAAAGTGGTTGGAGTGGA 57.762 40.909 0.00 0.00 0.00 4.02
6179 6417 4.204012 TGTAAAAAGTGGTTGGAGTGGAG 58.796 43.478 0.00 0.00 0.00 3.86
6180 6418 3.382083 AAAAAGTGGTTGGAGTGGAGT 57.618 42.857 0.00 0.00 0.00 3.85
6181 6419 3.382083 AAAAGTGGTTGGAGTGGAGTT 57.618 42.857 0.00 0.00 0.00 3.01
6182 6420 4.513406 AAAAGTGGTTGGAGTGGAGTTA 57.487 40.909 0.00 0.00 0.00 2.24
6183 6421 3.771577 AAGTGGTTGGAGTGGAGTTAG 57.228 47.619 0.00 0.00 0.00 2.34
6184 6422 2.972348 AGTGGTTGGAGTGGAGTTAGA 58.028 47.619 0.00 0.00 0.00 2.10
6185 6423 3.521727 AGTGGTTGGAGTGGAGTTAGAT 58.478 45.455 0.00 0.00 0.00 1.98
6186 6424 3.910627 AGTGGTTGGAGTGGAGTTAGATT 59.089 43.478 0.00 0.00 0.00 2.40
6187 6425 4.351111 AGTGGTTGGAGTGGAGTTAGATTT 59.649 41.667 0.00 0.00 0.00 2.17
6188 6426 4.695928 GTGGTTGGAGTGGAGTTAGATTTC 59.304 45.833 0.00 0.00 0.00 2.17
6189 6427 4.262617 GGTTGGAGTGGAGTTAGATTTCC 58.737 47.826 0.00 0.00 0.00 3.13
6190 6428 4.019231 GGTTGGAGTGGAGTTAGATTTCCT 60.019 45.833 0.00 0.00 34.48 3.36
6191 6429 5.189145 GGTTGGAGTGGAGTTAGATTTCCTA 59.811 44.000 0.00 0.00 34.48 2.94
6192 6430 6.126739 GGTTGGAGTGGAGTTAGATTTCCTAT 60.127 42.308 0.00 0.00 34.48 2.57
6193 6431 6.485830 TGGAGTGGAGTTAGATTTCCTATG 57.514 41.667 0.00 0.00 34.48 2.23
6194 6432 6.202331 TGGAGTGGAGTTAGATTTCCTATGA 58.798 40.000 0.00 0.00 34.48 2.15
6195 6433 6.672218 TGGAGTGGAGTTAGATTTCCTATGAA 59.328 38.462 0.00 0.00 34.48 2.57
6196 6434 7.182026 TGGAGTGGAGTTAGATTTCCTATGAAA 59.818 37.037 0.00 0.00 44.22 2.69
6208 6446 5.888982 TTCCTATGAAATGTACTCCCTCC 57.111 43.478 0.00 0.00 0.00 4.30
6209 6447 3.895656 TCCTATGAAATGTACTCCCTCCG 59.104 47.826 0.00 0.00 0.00 4.63
6210 6448 3.641906 CCTATGAAATGTACTCCCTCCGT 59.358 47.826 0.00 0.00 0.00 4.69
6211 6449 4.101119 CCTATGAAATGTACTCCCTCCGTT 59.899 45.833 0.00 0.00 0.00 4.44
6212 6450 3.604875 TGAAATGTACTCCCTCCGTTC 57.395 47.619 0.00 0.00 0.00 3.95
6213 6451 2.094390 TGAAATGTACTCCCTCCGTTCG 60.094 50.000 0.00 0.00 0.00 3.95
6214 6452 0.822164 AATGTACTCCCTCCGTTCGG 59.178 55.000 4.74 4.74 0.00 4.30
6215 6453 0.033796 ATGTACTCCCTCCGTTCGGA 60.034 55.000 13.34 13.34 0.00 4.55
6216 6454 0.251297 TGTACTCCCTCCGTTCGGAA 60.251 55.000 14.79 0.04 33.41 4.30
6217 6455 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
6218 6456 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
6219 6457 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
6220 6458 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
6221 6459 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
6222 6460 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
6223 6461 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
6224 6462 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
6225 6463 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
6226 6464 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
6227 6465 1.060122 CCGTTCGGAATTACTTGTCGC 59.940 52.381 5.19 0.00 0.00 5.19
6228 6466 1.266211 CGTTCGGAATTACTTGTCGCG 60.266 52.381 0.00 0.00 0.00 5.87
6229 6467 1.987770 GTTCGGAATTACTTGTCGCGA 59.012 47.619 3.71 3.71 0.00 5.87
6230 6468 2.350899 TCGGAATTACTTGTCGCGAA 57.649 45.000 12.06 0.00 0.00 4.70
6231 6469 2.674954 TCGGAATTACTTGTCGCGAAA 58.325 42.857 12.06 0.54 0.00 3.46
6232 6470 3.058450 TCGGAATTACTTGTCGCGAAAA 58.942 40.909 12.06 12.01 0.00 2.29
6233 6471 3.680937 TCGGAATTACTTGTCGCGAAAAT 59.319 39.130 13.05 5.74 0.00 1.82
6234 6472 4.152759 TCGGAATTACTTGTCGCGAAAATT 59.847 37.500 13.05 9.80 0.00 1.82
6235 6473 4.259734 CGGAATTACTTGTCGCGAAAATTG 59.740 41.667 13.05 4.35 0.00 2.32
6236 6474 5.387279 GGAATTACTTGTCGCGAAAATTGA 58.613 37.500 13.05 4.07 0.00 2.57
6237 6475 6.027749 GGAATTACTTGTCGCGAAAATTGAT 58.972 36.000 13.05 6.50 0.00 2.57
6238 6476 6.021468 GGAATTACTTGTCGCGAAAATTGATG 60.021 38.462 13.05 2.76 0.00 3.07
6239 6477 3.896648 ACTTGTCGCGAAAATTGATGT 57.103 38.095 13.05 3.46 0.00 3.06
6240 6478 6.469139 TTACTTGTCGCGAAAATTGATGTA 57.531 33.333 13.05 8.01 0.00 2.29
6241 6479 5.545658 ACTTGTCGCGAAAATTGATGTAT 57.454 34.783 13.05 0.00 0.00 2.29
6242 6480 5.560148 ACTTGTCGCGAAAATTGATGTATC 58.440 37.500 13.05 0.00 0.00 2.24
6243 6481 5.351465 ACTTGTCGCGAAAATTGATGTATCT 59.649 36.000 13.05 0.00 0.00 1.98
6244 6482 6.533723 ACTTGTCGCGAAAATTGATGTATCTA 59.466 34.615 13.05 0.00 0.00 1.98
6245 6483 6.510746 TGTCGCGAAAATTGATGTATCTAG 57.489 37.500 12.06 0.00 0.00 2.43
6246 6484 6.270064 TGTCGCGAAAATTGATGTATCTAGA 58.730 36.000 12.06 0.00 0.00 2.43
6247 6485 6.754675 TGTCGCGAAAATTGATGTATCTAGAA 59.245 34.615 12.06 0.00 0.00 2.10
6248 6486 7.058005 GTCGCGAAAATTGATGTATCTAGAAC 58.942 38.462 12.06 0.00 0.00 3.01
6249 6487 6.978659 TCGCGAAAATTGATGTATCTAGAACT 59.021 34.615 6.20 0.00 0.00 3.01
6250 6488 8.132995 TCGCGAAAATTGATGTATCTAGAACTA 58.867 33.333 6.20 0.00 0.00 2.24
6251 6489 8.752254 CGCGAAAATTGATGTATCTAGAACTAA 58.248 33.333 0.00 0.00 0.00 2.24
6278 6516 9.664332 AATACATCTAGATACATCCATTTCTGC 57.336 33.333 4.54 0.00 0.00 4.26
6279 6517 6.162079 ACATCTAGATACATCCATTTCTGCG 58.838 40.000 4.54 0.00 0.00 5.18
6280 6518 6.015095 ACATCTAGATACATCCATTTCTGCGA 60.015 38.462 4.54 0.00 0.00 5.10
6281 6519 5.773575 TCTAGATACATCCATTTCTGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
6282 6520 3.384668 AGATACATCCATTTCTGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
6283 6521 2.951457 TACATCCATTTCTGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
6284 6522 1.645034 ACATCCATTTCTGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
6285 6523 1.066858 ACATCCATTTCTGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
6286 6524 2.165641 ACATCCATTTCTGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
6287 6525 3.186909 CATCCATTTCTGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
6288 6526 3.520290 TCCATTTCTGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
6289 6527 3.857052 TCCATTTCTGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
6290 6528 3.863424 TCCATTTCTGCGACGAGTAATTC 59.137 43.478 0.00 0.00 0.00 2.17
6291 6529 3.001330 CCATTTCTGCGACGAGTAATTCC 59.999 47.826 0.00 0.00 0.00 3.01
6292 6530 1.904144 TTCTGCGACGAGTAATTCCG 58.096 50.000 0.00 0.00 0.00 4.30
6293 6531 1.089112 TCTGCGACGAGTAATTCCGA 58.911 50.000 0.00 0.00 0.00 4.55
6294 6532 1.469703 TCTGCGACGAGTAATTCCGAA 59.530 47.619 0.00 0.00 0.00 4.30
6295 6533 1.582502 CTGCGACGAGTAATTCCGAAC 59.417 52.381 0.00 0.00 0.00 3.95
6296 6534 0.564767 GCGACGAGTAATTCCGAACG 59.435 55.000 0.00 0.00 34.66 3.95
6297 6535 1.186030 CGACGAGTAATTCCGAACGG 58.814 55.000 6.94 6.94 0.00 4.44
6298 6536 1.202065 CGACGAGTAATTCCGAACGGA 60.202 52.381 12.04 12.04 43.52 4.69
6299 6537 2.448219 GACGAGTAATTCCGAACGGAG 58.552 52.381 15.34 5.60 46.06 4.63
6300 6538 1.133790 ACGAGTAATTCCGAACGGAGG 59.866 52.381 15.34 4.28 46.06 4.30
6301 6539 1.535437 CGAGTAATTCCGAACGGAGGG 60.535 57.143 15.34 0.00 46.06 4.30
6302 6540 1.753073 GAGTAATTCCGAACGGAGGGA 59.247 52.381 15.34 2.49 46.06 4.20
6303 6541 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
6304 6542 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
6305 6543 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
6306 6544 1.400737 ATTCCGAACGGAGGGAGTAG 58.599 55.000 15.34 0.00 46.06 2.57
6307 6545 0.038744 TTCCGAACGGAGGGAGTAGT 59.961 55.000 15.34 0.00 46.06 2.73
6308 6546 0.911769 TCCGAACGGAGGGAGTAGTA 59.088 55.000 12.04 0.00 39.76 1.82
6309 6547 1.020437 CCGAACGGAGGGAGTAGTAC 58.980 60.000 7.53 0.00 37.50 2.73
6310 6548 1.679944 CCGAACGGAGGGAGTAGTACA 60.680 57.143 7.53 0.00 37.50 2.90
6311 6549 2.086869 CGAACGGAGGGAGTAGTACAA 58.913 52.381 2.52 0.00 0.00 2.41
6312 6550 2.489329 CGAACGGAGGGAGTAGTACAAA 59.511 50.000 2.52 0.00 0.00 2.83
6313 6551 3.057315 CGAACGGAGGGAGTAGTACAAAA 60.057 47.826 2.52 0.00 0.00 2.44
6314 6552 4.492611 GAACGGAGGGAGTAGTACAAAAG 58.507 47.826 2.52 0.00 0.00 2.27
6315 6553 3.771216 ACGGAGGGAGTAGTACAAAAGA 58.229 45.455 2.52 0.00 0.00 2.52
6316 6554 4.351127 ACGGAGGGAGTAGTACAAAAGAT 58.649 43.478 2.52 0.00 0.00 2.40
6317 6555 4.776308 ACGGAGGGAGTAGTACAAAAGATT 59.224 41.667 2.52 0.00 0.00 2.40
6318 6556 5.105432 ACGGAGGGAGTAGTACAAAAGATTC 60.105 44.000 2.52 0.00 0.00 2.52
6319 6557 5.672503 GGAGGGAGTAGTACAAAAGATTCC 58.327 45.833 2.52 0.00 0.00 3.01
6320 6558 5.189145 GGAGGGAGTAGTACAAAAGATTCCA 59.811 44.000 2.52 0.00 0.00 3.53
6321 6559 6.126739 GGAGGGAGTAGTACAAAAGATTCCAT 60.127 42.308 2.52 0.00 0.00 3.41
6322 6560 7.272144 AGGGAGTAGTACAAAAGATTCCATT 57.728 36.000 2.52 0.00 0.00 3.16
6323 6561 7.112779 AGGGAGTAGTACAAAAGATTCCATTG 58.887 38.462 2.52 0.00 0.00 2.82
6324 6562 6.318900 GGGAGTAGTACAAAAGATTCCATTGG 59.681 42.308 2.52 0.00 0.00 3.16
6325 6563 7.110155 GGAGTAGTACAAAAGATTCCATTGGA 58.890 38.462 0.00 0.00 0.00 3.53
6326 6564 7.610305 GGAGTAGTACAAAAGATTCCATTGGAA 59.390 37.037 20.09 20.09 46.39 3.53
6327 6565 8.934023 AGTAGTACAAAAGATTCCATTGGAAA 57.066 30.769 21.52 6.17 45.41 3.13
6328 6566 9.362151 AGTAGTACAAAAGATTCCATTGGAAAA 57.638 29.630 21.52 0.44 45.41 2.29
6329 6567 9.974980 GTAGTACAAAAGATTCCATTGGAAAAA 57.025 29.630 21.52 0.00 45.41 1.94
6333 6571 8.394971 ACAAAAGATTCCATTGGAAAAATTCC 57.605 30.769 21.52 2.12 45.41 3.01
6348 6586 7.445121 GGAAAAATTCCTATGGGATTCAATCC 58.555 38.462 8.06 8.06 46.57 3.01
6349 6587 7.290948 GGAAAAATTCCTATGGGATTCAATCCT 59.709 37.037 16.37 0.00 46.41 3.24
6365 6603 8.827832 ATTCAATCCTATGAATCAAAGGACAA 57.172 30.769 0.00 0.00 44.64 3.18
6366 6604 8.648698 TTCAATCCTATGAATCAAAGGACAAA 57.351 30.769 0.00 0.00 42.08 2.83
6367 6605 8.055279 TCAATCCTATGAATCAAAGGACAAAC 57.945 34.615 0.00 0.00 42.08 2.93
6368 6606 6.683974 ATCCTATGAATCAAAGGACAAACG 57.316 37.500 0.00 0.00 42.08 3.60
6369 6607 5.556915 TCCTATGAATCAAAGGACAAACGT 58.443 37.500 0.00 0.00 34.46 3.99
6370 6608 6.703319 TCCTATGAATCAAAGGACAAACGTA 58.297 36.000 0.00 0.00 34.46 3.57
6371 6609 6.816640 TCCTATGAATCAAAGGACAAACGTAG 59.183 38.462 0.00 0.00 34.46 3.51
6372 6610 5.880054 ATGAATCAAAGGACAAACGTAGG 57.120 39.130 0.00 0.00 0.00 3.18
6373 6611 4.963373 TGAATCAAAGGACAAACGTAGGA 58.037 39.130 0.00 0.00 0.00 2.94
6374 6612 5.369833 TGAATCAAAGGACAAACGTAGGAA 58.630 37.500 0.00 0.00 0.00 3.36
6375 6613 5.823570 TGAATCAAAGGACAAACGTAGGAAA 59.176 36.000 0.00 0.00 0.00 3.13
6376 6614 6.319152 TGAATCAAAGGACAAACGTAGGAAAA 59.681 34.615 0.00 0.00 0.00 2.29
6377 6615 6.702716 ATCAAAGGACAAACGTAGGAAAAA 57.297 33.333 0.00 0.00 0.00 1.94
6378 6616 6.702716 TCAAAGGACAAACGTAGGAAAAAT 57.297 33.333 0.00 0.00 0.00 1.82
6379 6617 7.102847 TCAAAGGACAAACGTAGGAAAAATT 57.897 32.000 0.00 0.00 0.00 1.82
6380 6618 7.197703 TCAAAGGACAAACGTAGGAAAAATTC 58.802 34.615 0.00 0.00 0.00 2.17
6414 6652 9.989296 TTTCAATCCTCCAAAAATCCTATAGAA 57.011 29.630 0.00 0.00 0.00 2.10
6418 6656 9.593565 AATCCTCCAAAAATCCTATAGAATTCC 57.406 33.333 0.00 0.00 0.00 3.01
6419 6657 8.350180 TCCTCCAAAAATCCTATAGAATTCCT 57.650 34.615 0.00 0.00 0.00 3.36
6420 6658 8.791749 TCCTCCAAAAATCCTATAGAATTCCTT 58.208 33.333 0.00 0.00 0.00 3.36
6421 6659 9.426534 CCTCCAAAAATCCTATAGAATTCCTTT 57.573 33.333 0.00 0.00 0.00 3.11
6423 6661 9.989296 TCCAAAAATCCTATAGAATTCCTTTGA 57.011 29.630 9.31 0.00 0.00 2.69
6457 6695 8.322906 AGCCCTTAATTTGCATAAAGTTTTTC 57.677 30.769 0.00 0.00 0.00 2.29
6465 6703 5.356882 TGCATAAAGTTTTTCGTCTCCAG 57.643 39.130 0.00 0.00 0.00 3.86
7102 7347 7.931407 TGGTTGATGTAATGTCTAATTCGCTAT 59.069 33.333 0.00 0.00 0.00 2.97
7125 7370 6.097915 TGTCTTGGGTCGGATATCTTTATC 57.902 41.667 2.05 0.00 34.59 1.75
7144 7389 2.799017 TCTGATGCTCAAGTTTGCCAT 58.201 42.857 0.00 0.00 0.00 4.40
7148 7393 1.079612 GCTCAAGTTTGCCATGCCC 60.080 57.895 0.00 0.00 0.00 5.36
7215 7461 6.314896 GCTACTGTATGACTTCAGATGCTTTT 59.685 38.462 0.00 0.00 35.84 2.27
7237 7483 5.906113 TTTGGTCACTTACTTGCTCAAAA 57.094 34.783 0.00 0.00 0.00 2.44
7243 7489 5.626955 GTCACTTACTTGCTCAAAAGAATGC 59.373 40.000 2.19 0.00 0.00 3.56
7280 7606 7.759433 ACAATTTAGCGAAAAATGGTAATGGAG 59.241 33.333 11.28 0.00 32.38 3.86
7282 7608 4.965119 AGCGAAAAATGGTAATGGAGTC 57.035 40.909 0.00 0.00 0.00 3.36
7314 7640 6.801539 AATGCGGTATTTATACATCACAGG 57.198 37.500 2.61 0.00 34.98 4.00
7349 8376 9.305925 CTTAAACCAATCAGCCTCATATTTTTC 57.694 33.333 0.00 0.00 0.00 2.29
7358 8385 8.442632 TCAGCCTCATATTTTTCTGTAGAATG 57.557 34.615 0.00 0.00 33.54 2.67
7433 8466 1.876497 TTGCTTCTGCCCGCCATTTC 61.876 55.000 0.00 0.00 38.71 2.17
7593 8627 9.474920 TTTTGGCATTTCTTGACTATTTAACTG 57.525 29.630 0.00 0.00 32.91 3.16
7630 8664 5.418310 AAACTAGTGTTCCGTTTCACATG 57.582 39.130 0.00 0.00 37.07 3.21
7641 8675 5.518812 TCCGTTTCACATGAAATTTGTCAG 58.481 37.500 10.11 0.00 44.69 3.51
7646 8680 5.605564 TCACATGAAATTTGTCAGGTACG 57.394 39.130 0.00 0.00 40.37 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
205 206 1.614525 TGATGGCTCCCAGCTCTGT 60.615 57.895 0.95 0.00 41.01 3.41
207 208 2.071262 CCTGATGGCTCCCAGCTCT 61.071 63.158 0.95 0.00 41.01 4.09
221 222 1.070786 GTCTCAAACGCCACCCTGA 59.929 57.895 0.00 0.00 0.00 3.86
342 343 1.352083 AGCTAACACTCCAGCTGGAA 58.648 50.000 34.30 19.40 46.21 3.53
369 370 1.004440 AGCAGAGTTCAGGGTTCGC 60.004 57.895 0.00 0.00 0.00 4.70
386 387 2.971413 GGGCTAGCTCATGCGCAG 60.971 66.667 18.32 8.46 45.42 5.18
417 418 2.284150 CACACACGTGTTTGGTAGACTG 59.716 50.000 23.91 9.98 42.83 3.51
418 419 2.546778 CACACACGTGTTTGGTAGACT 58.453 47.619 23.91 0.00 42.83 3.24
451 452 0.451783 GCCACTTTGGGCGATACAAG 59.548 55.000 0.00 0.00 45.40 3.16
497 498 6.623743 GCAAAGCTTTATAGATTAACGACGTG 59.376 38.462 12.25 0.00 27.98 4.49
551 552 4.455877 CCTGTGAATAGTTTGGTCTGGAAC 59.544 45.833 0.00 0.00 0.00 3.62
552 553 4.104102 ACCTGTGAATAGTTTGGTCTGGAA 59.896 41.667 0.00 0.00 0.00 3.53
553 554 3.650942 ACCTGTGAATAGTTTGGTCTGGA 59.349 43.478 0.00 0.00 0.00 3.86
554 555 4.021102 ACCTGTGAATAGTTTGGTCTGG 57.979 45.455 0.00 0.00 0.00 3.86
555 556 7.148239 GGATAAACCTGTGAATAGTTTGGTCTG 60.148 40.741 0.00 0.00 35.45 3.51
556 557 6.884836 GGATAAACCTGTGAATAGTTTGGTCT 59.115 38.462 0.00 0.00 35.45 3.85
557 558 6.657541 TGGATAAACCTGTGAATAGTTTGGTC 59.342 38.462 0.00 0.00 39.86 4.02
558 559 6.433093 GTGGATAAACCTGTGAATAGTTTGGT 59.567 38.462 0.00 0.00 39.86 3.67
559 560 6.403200 CGTGGATAAACCTGTGAATAGTTTGG 60.403 42.308 0.00 0.00 39.86 3.28
560 561 6.403200 CCGTGGATAAACCTGTGAATAGTTTG 60.403 42.308 0.00 0.00 39.86 2.93
561 562 5.646360 CCGTGGATAAACCTGTGAATAGTTT 59.354 40.000 0.00 0.00 39.86 2.66
562 563 5.046159 TCCGTGGATAAACCTGTGAATAGTT 60.046 40.000 0.00 0.00 39.86 2.24
563 564 4.468510 TCCGTGGATAAACCTGTGAATAGT 59.531 41.667 0.00 0.00 39.86 2.12
564 565 5.018539 TCCGTGGATAAACCTGTGAATAG 57.981 43.478 0.00 0.00 39.86 1.73
565 566 4.682320 GCTCCGTGGATAAACCTGTGAATA 60.682 45.833 0.00 0.00 39.86 1.75
566 567 3.873910 CTCCGTGGATAAACCTGTGAAT 58.126 45.455 0.00 0.00 39.86 2.57
567 568 2.614481 GCTCCGTGGATAAACCTGTGAA 60.614 50.000 0.00 0.00 39.86 3.18
568 569 1.066430 GCTCCGTGGATAAACCTGTGA 60.066 52.381 0.00 0.00 39.86 3.58
569 570 1.338674 TGCTCCGTGGATAAACCTGTG 60.339 52.381 0.00 0.00 39.86 3.66
570 571 0.981183 TGCTCCGTGGATAAACCTGT 59.019 50.000 0.00 0.00 39.86 4.00
571 572 2.213499 GATGCTCCGTGGATAAACCTG 58.787 52.381 0.00 0.00 39.86 4.00
572 573 1.837439 TGATGCTCCGTGGATAAACCT 59.163 47.619 0.00 0.00 39.86 3.50
573 574 2.325583 TGATGCTCCGTGGATAAACC 57.674 50.000 0.00 0.00 39.54 3.27
574 575 6.560253 AATTATGATGCTCCGTGGATAAAC 57.440 37.500 0.00 0.00 0.00 2.01
575 576 8.862325 ATTAATTATGATGCTCCGTGGATAAA 57.138 30.769 0.00 0.00 0.00 1.40
579 580 9.764363 GATATATTAATTATGATGCTCCGTGGA 57.236 33.333 0.00 0.00 0.00 4.02
580 581 9.546428 TGATATATTAATTATGATGCTCCGTGG 57.454 33.333 0.00 0.00 0.00 4.94
634 635 8.917414 TGATAGGAGGTAGGATATTAATTGCT 57.083 34.615 0.00 0.00 0.00 3.91
650 651 8.321353 TGGTATTAATTACATGCTGATAGGAGG 58.679 37.037 0.00 0.00 31.99 4.30
678 679 7.544566 CGGATAAAATGCGTATTGATACTAGGT 59.455 37.037 0.00 0.00 39.38 3.08
744 829 3.189010 CTTTGCGGAAAACCGGCGT 62.189 57.895 6.01 0.00 43.21 5.68
904 990 1.750682 GCTCCTGTCTCTCCTCTCCTC 60.751 61.905 0.00 0.00 0.00 3.71
905 991 0.258774 GCTCCTGTCTCTCCTCTCCT 59.741 60.000 0.00 0.00 0.00 3.69
906 992 0.258774 AGCTCCTGTCTCTCCTCTCC 59.741 60.000 0.00 0.00 0.00 3.71
907 993 1.680338 GAGCTCCTGTCTCTCCTCTC 58.320 60.000 0.87 0.00 0.00 3.20
908 994 0.258774 GGAGCTCCTGTCTCTCCTCT 59.741 60.000 26.25 0.00 42.31 3.69
963 1049 2.422803 CGAATATTTTGGCTCCCTGGGA 60.423 50.000 16.13 16.13 0.00 4.37
1263 1349 1.415672 AACTCAAACCCTCCGCCTCA 61.416 55.000 0.00 0.00 0.00 3.86
1268 1354 3.679824 AGTAAGAACTCAAACCCTCCG 57.320 47.619 0.00 0.00 0.00 4.63
1322 1408 6.866770 TGACAACGAACCTACTTAATTCTCAG 59.133 38.462 0.00 0.00 0.00 3.35
1344 1430 6.183360 GCAACTTGTAATCTCCACTACATGAC 60.183 42.308 0.00 0.00 31.21 3.06
1373 1459 0.473694 TCTGAACCCAGAAGGAGGCA 60.474 55.000 0.00 0.00 45.74 4.75
1456 1542 5.125900 TGAGAACATTATTCACATGCCCAAG 59.874 40.000 0.00 0.00 0.00 3.61
1539 1625 4.325028 AATGGCGTAATATACCGTGTGA 57.675 40.909 0.00 0.00 0.00 3.58
1701 1837 8.000709 AGAGCAAATATGGAGGAACATCAATAA 58.999 33.333 0.00 0.00 32.39 1.40
1702 1838 7.520798 AGAGCAAATATGGAGGAACATCAATA 58.479 34.615 0.00 0.00 32.39 1.90
1716 1852 5.938710 AGATGCATACCTGAGAGCAAATATG 59.061 40.000 0.00 0.00 40.76 1.78
1773 1909 4.646492 ACTGTTTTCTCTGGCAACTTCATT 59.354 37.500 0.00 0.00 37.61 2.57
1939 2075 6.659824 TCTTTTACCACTCTCCTTTTTCTGT 58.340 36.000 0.00 0.00 0.00 3.41
2078 2214 0.671472 GCTGGCATTTCCCAACTTGC 60.671 55.000 0.00 0.00 33.73 4.01
2108 2244 3.983344 CACTCAAACTTGCCAAACTATGC 59.017 43.478 0.00 0.00 0.00 3.14
2223 2368 5.856126 TTCCAACGCATAATCGAATATCC 57.144 39.130 0.00 0.00 0.00 2.59
2348 2493 4.281182 ACTCTGTCAATACGTGAAAGGAGT 59.719 41.667 0.00 0.61 41.46 3.85
2364 2509 1.069204 TGTTCTGCCTCACACTCTGTC 59.931 52.381 0.00 0.00 0.00 3.51
2372 2517 4.836125 TCAGAAAAATGTTCTGCCTCAC 57.164 40.909 8.28 0.00 44.08 3.51
2410 2555 8.809066 TCTAACAAGCTAAATACTGGACACTAA 58.191 33.333 0.00 0.00 0.00 2.24
2437 2582 0.865111 CAACGCAACATTGGAGACGA 59.135 50.000 0.00 0.00 0.00 4.20
2439 2584 3.064207 TCTACAACGCAACATTGGAGAC 58.936 45.455 0.00 0.00 41.24 3.36
2559 2712 2.428530 GGGAAGAAAACATGCCTGGATC 59.571 50.000 0.00 0.00 0.00 3.36
2585 2738 1.410882 GGATGAGGAGAGAAGGAACCG 59.589 57.143 0.00 0.00 0.00 4.44
2630 2783 2.114670 CCATCGCTTGCGGTGGATT 61.115 57.895 35.31 4.00 33.53 3.01
2631 2784 2.514592 CCATCGCTTGCGGTGGAT 60.515 61.111 35.31 10.87 33.53 3.41
2682 2835 2.272146 CCACCGGTGGCTAGCATT 59.728 61.111 39.44 0.00 44.73 3.56
2756 2909 4.808414 TGTTGGTGACAGAGGAAGATAG 57.192 45.455 0.00 0.00 44.54 2.08
2765 2918 1.955778 CTTGCCATTGTTGGTGACAGA 59.044 47.619 0.00 0.00 45.57 3.41
2824 2977 3.442273 GCTATCCTCTACGCTGCTATTCT 59.558 47.826 0.00 0.00 0.00 2.40
2852 3005 1.459348 TCCCTGTCACCTGTCAGCA 60.459 57.895 0.00 0.00 31.40 4.41
3110 3263 0.036732 TGGAGCAGGCAATTCGAAGT 59.963 50.000 3.35 0.00 0.00 3.01
3118 3271 2.804986 TCATACAATGGAGCAGGCAA 57.195 45.000 0.00 0.00 0.00 4.52
3193 3346 2.489971 TGAGTTTGTGGCTTAAGACCG 58.510 47.619 5.69 0.00 0.00 4.79
3201 3355 1.985473 TCAAGCATGAGTTTGTGGCT 58.015 45.000 0.00 0.00 37.27 4.75
3202 3356 2.294233 TCTTCAAGCATGAGTTTGTGGC 59.706 45.455 0.00 0.00 37.27 5.01
3250 3404 6.265577 GCCAGGCTACATTTGTACAAAATAG 58.734 40.000 23.97 24.62 33.56 1.73
3252 3406 4.081697 GGCCAGGCTACATTTGTACAAAAT 60.082 41.667 23.97 17.15 33.56 1.82
3265 3419 0.541863 TAGAGCAAAGGCCAGGCTAC 59.458 55.000 12.43 9.32 42.56 3.58
3287 3441 5.581350 ATGGGATGTTTGGGTTGAAAATT 57.419 34.783 0.00 0.00 0.00 1.82
3353 3560 5.880054 AGTCAAAATTAGGGTCACATTCG 57.120 39.130 0.00 0.00 0.00 3.34
3383 3591 9.155785 AGTTATAGGCTATAAAAGTTAGGCTCA 57.844 33.333 24.58 0.00 46.26 4.26
3457 3684 8.910351 AATAATGGAGCAGAAAGATTAGTACC 57.090 34.615 0.00 0.00 0.00 3.34
3538 3765 1.149401 GCAGGACCTAGGAATGGCC 59.851 63.158 17.98 8.41 0.00 5.36
3566 3793 1.000107 TATGGTGCCAGCAATGCCA 60.000 52.632 0.00 3.25 0.00 4.92
3631 3858 2.231716 GGAGGCCCCAACAGTAAATT 57.768 50.000 0.00 0.00 34.14 1.82
3716 3945 8.810652 TCCAAACATAAAAATGCACTTAACTC 57.189 30.769 0.00 0.00 0.00 3.01
3829 4058 5.468540 AAGTGGAAAACCCTTGCTTATTC 57.531 39.130 0.00 0.00 35.38 1.75
3839 4069 1.760029 TCTTGCCAAAGTGGAAAACCC 59.240 47.619 0.00 0.00 40.96 4.11
3841 4071 3.309682 GCTTTCTTGCCAAAGTGGAAAAC 59.690 43.478 0.00 0.00 40.96 2.43
3864 4094 4.788679 GCCCCTATTTAGGAGCTTTTGTA 58.211 43.478 5.16 0.00 46.63 2.41
4044 4274 5.189180 GGCAGTGGAGAATGAAAAGACTAT 58.811 41.667 0.00 0.00 0.00 2.12
4145 4375 1.869774 TGAGGCGCATTAGCTACATG 58.130 50.000 10.83 2.37 39.10 3.21
4174 4404 5.121142 GCGGCTGTCAGTTACAAGTTTATTA 59.879 40.000 0.93 0.00 37.74 0.98
4458 4688 5.422666 TTTATTGCATATCAGCAGAACCG 57.577 39.130 0.00 0.00 46.54 4.44
4569 4799 9.439500 GGTGTTAATTGTAGAGTATAACCAACA 57.561 33.333 0.00 0.00 0.00 3.33
4570 4800 9.439500 TGGTGTTAATTGTAGAGTATAACCAAC 57.561 33.333 0.00 0.00 30.25 3.77
4737 4968 3.776340 ACCACATTTTTGTTCAACGGAC 58.224 40.909 0.00 0.00 0.00 4.79
4741 4972 5.415221 TGAAGGACCACATTTTTGTTCAAC 58.585 37.500 0.00 0.00 0.00 3.18
4757 4988 1.412710 TCTCACCGGCATATGAAGGAC 59.587 52.381 19.62 0.00 0.00 3.85
5072 5303 6.054941 TCAGAAGGATAATGCGAGCAATAAA 58.945 36.000 0.57 0.00 0.00 1.40
5110 5341 8.089625 TGGGAGATAAATCACTCTTGAACATA 57.910 34.615 0.00 0.00 34.61 2.29
5281 5512 0.611618 CCTGCATGGTGCCAAGGTTA 60.612 55.000 0.00 0.00 44.23 2.85
5317 5548 9.455847 GCATAAATCATCACCAAAATAGTCTTC 57.544 33.333 0.00 0.00 0.00 2.87
5569 5800 9.548208 GAATGAAAGCATACTCTTTTAACACTC 57.452 33.333 0.00 0.00 36.50 3.51
5638 5869 4.495349 GCTTGAACTGATGTCATGGATTCG 60.495 45.833 0.00 0.00 0.00 3.34
5734 5967 6.619801 ATTTATCCTTTCCTTGCGTGATAC 57.380 37.500 0.00 0.00 0.00 2.24
5738 5971 5.925969 ACAAAATTTATCCTTTCCTTGCGTG 59.074 36.000 0.00 0.00 0.00 5.34
5741 5974 8.607441 AAAGACAAAATTTATCCTTTCCTTGC 57.393 30.769 0.00 0.00 0.00 4.01
5777 6010 1.086696 CGTGCCAATGTCGGAAGAAT 58.913 50.000 0.00 0.00 45.01 2.40
5800 6033 7.832503 TTCATCTACTGTGAACACACATATG 57.167 36.000 0.00 0.00 42.45 1.78
5914 6150 5.501156 CAAGAAACTGACCTTATAGGCCTT 58.499 41.667 12.58 0.81 39.63 4.35
6069 6307 9.347240 CATGACACTCCAATCCTATATTTTTCT 57.653 33.333 0.00 0.00 0.00 2.52
6070 6308 8.078596 GCATGACACTCCAATCCTATATTTTTC 58.921 37.037 0.00 0.00 0.00 2.29
6073 6311 5.702670 CGCATGACACTCCAATCCTATATTT 59.297 40.000 0.00 0.00 0.00 1.40
6074 6312 5.240891 CGCATGACACTCCAATCCTATATT 58.759 41.667 0.00 0.00 0.00 1.28
6075 6313 4.825422 CGCATGACACTCCAATCCTATAT 58.175 43.478 0.00 0.00 0.00 0.86
6076 6314 3.554960 GCGCATGACACTCCAATCCTATA 60.555 47.826 0.30 0.00 0.00 1.31
6077 6315 2.808202 GCGCATGACACTCCAATCCTAT 60.808 50.000 0.30 0.00 0.00 2.57
6078 6316 1.473257 GCGCATGACACTCCAATCCTA 60.473 52.381 0.30 0.00 0.00 2.94
6079 6317 0.745845 GCGCATGACACTCCAATCCT 60.746 55.000 0.30 0.00 0.00 3.24
6080 6318 1.026182 TGCGCATGACACTCCAATCC 61.026 55.000 5.66 0.00 0.00 3.01
6081 6319 0.097674 GTGCGCATGACACTCCAATC 59.902 55.000 15.91 0.00 35.12 2.67
6082 6320 0.321919 AGTGCGCATGACACTCCAAT 60.322 50.000 15.91 0.00 45.06 3.16
6083 6321 1.071299 AGTGCGCATGACACTCCAA 59.929 52.632 15.91 0.00 45.06 3.53
6084 6322 2.743060 AGTGCGCATGACACTCCA 59.257 55.556 15.91 0.00 45.06 3.86
6088 6326 1.466360 GGATTCAAGTGCGCATGACAC 60.466 52.381 15.91 10.35 38.35 3.67
6089 6327 0.804364 GGATTCAAGTGCGCATGACA 59.196 50.000 15.91 5.89 0.00 3.58
6090 6328 1.089920 AGGATTCAAGTGCGCATGAC 58.910 50.000 15.91 0.00 0.00 3.06
6091 6329 2.689553 TAGGATTCAAGTGCGCATGA 57.310 45.000 15.91 12.23 0.00 3.07
6092 6330 3.434641 CCTATAGGATTCAAGTGCGCATG 59.565 47.826 15.91 9.46 37.39 4.06
6093 6331 3.324846 TCCTATAGGATTCAAGTGCGCAT 59.675 43.478 18.00 0.00 39.78 4.73
6094 6332 2.698274 TCCTATAGGATTCAAGTGCGCA 59.302 45.455 18.00 5.66 39.78 6.09
6095 6333 3.386768 TCCTATAGGATTCAAGTGCGC 57.613 47.619 18.00 0.00 39.78 6.09
6107 6345 6.426646 AACACTCCTTGCTAATCCTATAGG 57.573 41.667 13.07 13.07 0.00 2.57
6108 6346 7.500992 TCAAACACTCCTTGCTAATCCTATAG 58.499 38.462 0.00 0.00 0.00 1.31
6109 6347 7.432148 TCAAACACTCCTTGCTAATCCTATA 57.568 36.000 0.00 0.00 0.00 1.31
6110 6348 6.313519 TCAAACACTCCTTGCTAATCCTAT 57.686 37.500 0.00 0.00 0.00 2.57
6111 6349 5.755409 TCAAACACTCCTTGCTAATCCTA 57.245 39.130 0.00 0.00 0.00 2.94
6112 6350 4.640771 TCAAACACTCCTTGCTAATCCT 57.359 40.909 0.00 0.00 0.00 3.24
6113 6351 5.904362 AATCAAACACTCCTTGCTAATCC 57.096 39.130 0.00 0.00 0.00 3.01
6114 6352 6.803807 GTGAAATCAAACACTCCTTGCTAATC 59.196 38.462 0.00 0.00 34.65 1.75
6115 6353 6.568462 CGTGAAATCAAACACTCCTTGCTAAT 60.568 38.462 0.00 0.00 35.23 1.73
6116 6354 5.277779 CGTGAAATCAAACACTCCTTGCTAA 60.278 40.000 0.00 0.00 35.23 3.09
6117 6355 4.213270 CGTGAAATCAAACACTCCTTGCTA 59.787 41.667 0.00 0.00 35.23 3.49
6118 6356 3.003689 CGTGAAATCAAACACTCCTTGCT 59.996 43.478 0.00 0.00 35.23 3.91
6119 6357 3.003275 TCGTGAAATCAAACACTCCTTGC 59.997 43.478 0.00 0.00 35.23 4.01
6120 6358 4.511454 TCTCGTGAAATCAAACACTCCTTG 59.489 41.667 0.00 0.00 35.23 3.61
6121 6359 4.703897 TCTCGTGAAATCAAACACTCCTT 58.296 39.130 0.00 0.00 35.23 3.36
6122 6360 4.336889 TCTCGTGAAATCAAACACTCCT 57.663 40.909 0.00 0.00 35.23 3.69
6123 6361 5.418310 TTTCTCGTGAAATCAAACACTCC 57.582 39.130 8.50 0.00 37.27 3.85
6124 6362 5.396654 GCTTTTCTCGTGAAATCAAACACTC 59.603 40.000 12.95 0.00 41.24 3.51
6125 6363 5.273944 GCTTTTCTCGTGAAATCAAACACT 58.726 37.500 12.95 0.00 41.24 3.55
6126 6364 4.144731 CGCTTTTCTCGTGAAATCAAACAC 59.855 41.667 12.95 0.00 41.24 3.32
6127 6365 4.034626 TCGCTTTTCTCGTGAAATCAAACA 59.965 37.500 12.95 0.00 41.24 2.83
6128 6366 4.523813 TCGCTTTTCTCGTGAAATCAAAC 58.476 39.130 12.95 2.05 41.24 2.93
6129 6367 4.804608 TCGCTTTTCTCGTGAAATCAAA 57.195 36.364 12.95 0.00 41.24 2.69
6130 6368 4.319477 CCTTCGCTTTTCTCGTGAAATCAA 60.319 41.667 12.95 0.00 41.24 2.57
6131 6369 3.186409 CCTTCGCTTTTCTCGTGAAATCA 59.814 43.478 12.95 0.00 41.24 2.57
6132 6370 3.432252 TCCTTCGCTTTTCTCGTGAAATC 59.568 43.478 12.95 7.76 41.24 2.17
6133 6371 3.399330 TCCTTCGCTTTTCTCGTGAAAT 58.601 40.909 12.95 0.00 41.24 2.17
6134 6372 2.828877 TCCTTCGCTTTTCTCGTGAAA 58.171 42.857 8.50 8.50 40.08 2.69
6135 6373 2.519377 TCCTTCGCTTTTCTCGTGAA 57.481 45.000 0.00 0.00 0.00 3.18
6136 6374 2.519377 TTCCTTCGCTTTTCTCGTGA 57.481 45.000 0.00 0.00 0.00 4.35
6137 6375 3.058914 ACAATTCCTTCGCTTTTCTCGTG 60.059 43.478 0.00 0.00 0.00 4.35
6138 6376 3.139077 ACAATTCCTTCGCTTTTCTCGT 58.861 40.909 0.00 0.00 0.00 4.18
6139 6377 3.813529 ACAATTCCTTCGCTTTTCTCG 57.186 42.857 0.00 0.00 0.00 4.04
6140 6378 7.648112 ACTTTTTACAATTCCTTCGCTTTTCTC 59.352 33.333 0.00 0.00 0.00 2.87
6141 6379 7.435192 CACTTTTTACAATTCCTTCGCTTTTCT 59.565 33.333 0.00 0.00 0.00 2.52
6142 6380 7.306574 CCACTTTTTACAATTCCTTCGCTTTTC 60.307 37.037 0.00 0.00 0.00 2.29
6143 6381 6.478673 CCACTTTTTACAATTCCTTCGCTTTT 59.521 34.615 0.00 0.00 0.00 2.27
6144 6382 5.983118 CCACTTTTTACAATTCCTTCGCTTT 59.017 36.000 0.00 0.00 0.00 3.51
6145 6383 5.068591 ACCACTTTTTACAATTCCTTCGCTT 59.931 36.000 0.00 0.00 0.00 4.68
6146 6384 4.583073 ACCACTTTTTACAATTCCTTCGCT 59.417 37.500 0.00 0.00 0.00 4.93
6147 6385 4.866921 ACCACTTTTTACAATTCCTTCGC 58.133 39.130 0.00 0.00 0.00 4.70
6148 6386 5.689961 CCAACCACTTTTTACAATTCCTTCG 59.310 40.000 0.00 0.00 0.00 3.79
6149 6387 6.811954 TCCAACCACTTTTTACAATTCCTTC 58.188 36.000 0.00 0.00 0.00 3.46
6150 6388 6.382859 ACTCCAACCACTTTTTACAATTCCTT 59.617 34.615 0.00 0.00 0.00 3.36
6151 6389 5.897250 ACTCCAACCACTTTTTACAATTCCT 59.103 36.000 0.00 0.00 0.00 3.36
6152 6390 5.983118 CACTCCAACCACTTTTTACAATTCC 59.017 40.000 0.00 0.00 0.00 3.01
6153 6391 5.983118 CCACTCCAACCACTTTTTACAATTC 59.017 40.000 0.00 0.00 0.00 2.17
6154 6392 5.659079 TCCACTCCAACCACTTTTTACAATT 59.341 36.000 0.00 0.00 0.00 2.32
6155 6393 5.205056 TCCACTCCAACCACTTTTTACAAT 58.795 37.500 0.00 0.00 0.00 2.71
6156 6394 4.601084 TCCACTCCAACCACTTTTTACAA 58.399 39.130 0.00 0.00 0.00 2.41
6157 6395 4.204012 CTCCACTCCAACCACTTTTTACA 58.796 43.478 0.00 0.00 0.00 2.41
6158 6396 4.204799 ACTCCACTCCAACCACTTTTTAC 58.795 43.478 0.00 0.00 0.00 2.01
6159 6397 4.513406 ACTCCACTCCAACCACTTTTTA 57.487 40.909 0.00 0.00 0.00 1.52
6160 6398 3.382083 ACTCCACTCCAACCACTTTTT 57.618 42.857 0.00 0.00 0.00 1.94
6161 6399 3.382083 AACTCCACTCCAACCACTTTT 57.618 42.857 0.00 0.00 0.00 2.27
6162 6400 3.714798 TCTAACTCCACTCCAACCACTTT 59.285 43.478 0.00 0.00 0.00 2.66
6163 6401 3.314693 TCTAACTCCACTCCAACCACTT 58.685 45.455 0.00 0.00 0.00 3.16
6164 6402 2.972348 TCTAACTCCACTCCAACCACT 58.028 47.619 0.00 0.00 0.00 4.00
6165 6403 3.983044 ATCTAACTCCACTCCAACCAC 57.017 47.619 0.00 0.00 0.00 4.16
6166 6404 4.263331 GGAAATCTAACTCCACTCCAACCA 60.263 45.833 0.00 0.00 0.00 3.67
6167 6405 4.019231 AGGAAATCTAACTCCACTCCAACC 60.019 45.833 0.00 0.00 33.83 3.77
6168 6406 5.167303 AGGAAATCTAACTCCACTCCAAC 57.833 43.478 0.00 0.00 33.83 3.77
6169 6407 6.672218 TCATAGGAAATCTAACTCCACTCCAA 59.328 38.462 0.00 0.00 33.83 3.53
6170 6408 6.202331 TCATAGGAAATCTAACTCCACTCCA 58.798 40.000 0.00 0.00 33.83 3.86
6171 6409 6.732896 TCATAGGAAATCTAACTCCACTCC 57.267 41.667 0.00 0.00 33.83 3.85
6185 6423 5.163343 CGGAGGGAGTACATTTCATAGGAAA 60.163 44.000 4.85 4.85 46.36 3.13
6186 6424 4.344102 CGGAGGGAGTACATTTCATAGGAA 59.656 45.833 0.00 0.00 0.00 3.36
6187 6425 3.895656 CGGAGGGAGTACATTTCATAGGA 59.104 47.826 0.00 0.00 0.00 2.94
6188 6426 3.641906 ACGGAGGGAGTACATTTCATAGG 59.358 47.826 0.00 0.00 0.00 2.57
6189 6427 4.939052 ACGGAGGGAGTACATTTCATAG 57.061 45.455 0.00 0.00 0.00 2.23
6190 6428 4.202080 CGAACGGAGGGAGTACATTTCATA 60.202 45.833 0.00 0.00 0.00 2.15
6191 6429 3.430374 CGAACGGAGGGAGTACATTTCAT 60.430 47.826 0.00 0.00 0.00 2.57
6192 6430 2.094390 CGAACGGAGGGAGTACATTTCA 60.094 50.000 0.00 0.00 0.00 2.69
6193 6431 2.537401 CGAACGGAGGGAGTACATTTC 58.463 52.381 0.00 0.00 0.00 2.17
6194 6432 1.206371 CCGAACGGAGGGAGTACATTT 59.794 52.381 7.53 0.00 37.50 2.32
6195 6433 0.822164 CCGAACGGAGGGAGTACATT 59.178 55.000 7.53 0.00 37.50 2.71
6196 6434 0.033796 TCCGAACGGAGGGAGTACAT 60.034 55.000 12.04 0.00 39.76 2.29
6197 6435 0.251297 TTCCGAACGGAGGGAGTACA 60.251 55.000 15.34 0.00 46.06 2.90
6198 6436 1.109609 ATTCCGAACGGAGGGAGTAC 58.890 55.000 15.34 0.00 46.06 2.73
6199 6437 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
6200 6438 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
6201 6439 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
6202 6440 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
6203 6441 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
6204 6442 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
6205 6443 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
6206 6444 2.598589 CGACAAGTAATTCCGAACGGA 58.401 47.619 12.04 12.04 43.52 4.69
6207 6445 1.060122 GCGACAAGTAATTCCGAACGG 59.940 52.381 6.94 6.94 0.00 4.44
6208 6446 1.266211 CGCGACAAGTAATTCCGAACG 60.266 52.381 0.00 0.00 0.00 3.95
6209 6447 1.987770 TCGCGACAAGTAATTCCGAAC 59.012 47.619 3.71 0.00 0.00 3.95
6210 6448 2.350899 TCGCGACAAGTAATTCCGAA 57.649 45.000 3.71 0.00 0.00 4.30
6211 6449 2.350899 TTCGCGACAAGTAATTCCGA 57.649 45.000 9.15 0.00 0.00 4.55
6212 6450 3.443054 TTTTCGCGACAAGTAATTCCG 57.557 42.857 9.15 0.00 0.00 4.30
6213 6451 5.387279 TCAATTTTCGCGACAAGTAATTCC 58.613 37.500 9.15 0.00 0.00 3.01
6214 6452 6.523201 ACATCAATTTTCGCGACAAGTAATTC 59.477 34.615 9.15 0.00 0.00 2.17
6215 6453 6.378582 ACATCAATTTTCGCGACAAGTAATT 58.621 32.000 9.15 7.35 0.00 1.40
6216 6454 5.938322 ACATCAATTTTCGCGACAAGTAAT 58.062 33.333 9.15 0.00 0.00 1.89
6217 6455 5.351233 ACATCAATTTTCGCGACAAGTAA 57.649 34.783 9.15 0.00 0.00 2.24
6218 6456 6.533723 AGATACATCAATTTTCGCGACAAGTA 59.466 34.615 9.15 7.41 0.00 2.24
6219 6457 3.896648 ACATCAATTTTCGCGACAAGT 57.103 38.095 9.15 4.83 0.00 3.16
6220 6458 5.799960 AGATACATCAATTTTCGCGACAAG 58.200 37.500 9.15 0.00 0.00 3.16
6221 6459 5.794687 AGATACATCAATTTTCGCGACAA 57.205 34.783 9.15 9.93 0.00 3.18
6222 6460 6.270064 TCTAGATACATCAATTTTCGCGACA 58.730 36.000 9.15 0.00 0.00 4.35
6223 6461 6.749216 TCTAGATACATCAATTTTCGCGAC 57.251 37.500 9.15 0.00 0.00 5.19
6224 6462 6.978659 AGTTCTAGATACATCAATTTTCGCGA 59.021 34.615 3.71 3.71 0.00 5.87
6225 6463 7.166628 AGTTCTAGATACATCAATTTTCGCG 57.833 36.000 0.00 0.00 0.00 5.87
6252 6490 9.664332 GCAGAAATGGATGTATCTAGATGTATT 57.336 33.333 15.79 4.32 0.00 1.89
6253 6491 7.978414 CGCAGAAATGGATGTATCTAGATGTAT 59.022 37.037 15.79 9.11 0.00 2.29
6254 6492 7.176690 TCGCAGAAATGGATGTATCTAGATGTA 59.823 37.037 15.79 4.44 0.00 2.29
6255 6493 6.015095 TCGCAGAAATGGATGTATCTAGATGT 60.015 38.462 15.79 1.25 0.00 3.06
6256 6494 6.309980 GTCGCAGAAATGGATGTATCTAGATG 59.690 42.308 15.79 0.00 39.69 2.90
6257 6495 6.393990 GTCGCAGAAATGGATGTATCTAGAT 58.606 40.000 10.73 10.73 39.69 1.98
6258 6496 5.562890 CGTCGCAGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 39.69 2.43
6259 6497 4.618912 CGTCGCAGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 39.69 2.43
6260 6498 4.277423 TCGTCGCAGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 39.69 1.98
6261 6499 3.068165 TCGTCGCAGAAATGGATGTATCT 59.932 43.478 0.00 0.00 39.69 1.98
6262 6500 3.381045 TCGTCGCAGAAATGGATGTATC 58.619 45.455 0.00 0.00 39.69 2.24
6263 6501 3.181475 ACTCGTCGCAGAAATGGATGTAT 60.181 43.478 0.00 0.00 39.69 2.29
6264 6502 2.165641 ACTCGTCGCAGAAATGGATGTA 59.834 45.455 0.00 0.00 39.69 2.29
6265 6503 1.066858 ACTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06
6266 6504 1.645034 ACTCGTCGCAGAAATGGATG 58.355 50.000 0.00 0.00 39.69 3.51
6267 6505 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
6268 6506 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
6269 6507 3.001330 GGAATTACTCGTCGCAGAAATGG 59.999 47.826 0.00 0.00 39.69 3.16
6270 6508 3.301835 CGGAATTACTCGTCGCAGAAATG 60.302 47.826 0.00 0.00 39.69 2.32
6271 6509 2.858344 CGGAATTACTCGTCGCAGAAAT 59.142 45.455 0.00 0.00 39.69 2.17
6272 6510 2.095110 TCGGAATTACTCGTCGCAGAAA 60.095 45.455 0.00 0.00 39.69 2.52
6273 6511 1.469703 TCGGAATTACTCGTCGCAGAA 59.530 47.619 0.00 0.00 39.69 3.02
6274 6512 1.089112 TCGGAATTACTCGTCGCAGA 58.911 50.000 0.00 0.00 0.00 4.26
6275 6513 1.582502 GTTCGGAATTACTCGTCGCAG 59.417 52.381 0.00 0.00 0.00 5.18
6276 6514 1.621107 GTTCGGAATTACTCGTCGCA 58.379 50.000 0.00 0.00 0.00 5.10
6277 6515 0.564767 CGTTCGGAATTACTCGTCGC 59.435 55.000 0.00 0.00 0.00 5.19
6278 6516 1.186030 CCGTTCGGAATTACTCGTCG 58.814 55.000 5.19 0.00 0.00 5.12
6279 6517 2.448219 CTCCGTTCGGAATTACTCGTC 58.552 52.381 14.79 0.00 33.41 4.20
6280 6518 1.133790 CCTCCGTTCGGAATTACTCGT 59.866 52.381 14.79 0.00 33.41 4.18
6281 6519 1.535437 CCCTCCGTTCGGAATTACTCG 60.535 57.143 14.79 1.97 33.41 4.18
6282 6520 1.753073 TCCCTCCGTTCGGAATTACTC 59.247 52.381 14.79 0.00 33.41 2.59
6283 6521 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
6284 6522 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
6285 6523 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
6286 6524 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
6287 6525 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
6288 6526 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
6289 6527 0.911769 TACTACTCCCTCCGTTCGGA 59.088 55.000 13.34 13.34 0.00 4.55
6290 6528 1.020437 GTACTACTCCCTCCGTTCGG 58.980 60.000 4.74 4.74 0.00 4.30
6291 6529 1.742761 TGTACTACTCCCTCCGTTCG 58.257 55.000 0.00 0.00 0.00 3.95
6292 6530 4.219288 TCTTTTGTACTACTCCCTCCGTTC 59.781 45.833 0.00 0.00 0.00 3.95
6293 6531 4.154942 TCTTTTGTACTACTCCCTCCGTT 58.845 43.478 0.00 0.00 0.00 4.44
6294 6532 3.771216 TCTTTTGTACTACTCCCTCCGT 58.229 45.455 0.00 0.00 0.00 4.69
6295 6533 5.340439 AATCTTTTGTACTACTCCCTCCG 57.660 43.478 0.00 0.00 0.00 4.63
6296 6534 5.189145 TGGAATCTTTTGTACTACTCCCTCC 59.811 44.000 0.00 0.00 0.00 4.30
6297 6535 6.295719 TGGAATCTTTTGTACTACTCCCTC 57.704 41.667 0.00 0.00 0.00 4.30
6298 6536 6.893020 ATGGAATCTTTTGTACTACTCCCT 57.107 37.500 0.00 0.00 0.00 4.20
6299 6537 6.318900 CCAATGGAATCTTTTGTACTACTCCC 59.681 42.308 0.00 0.00 0.00 4.30
6300 6538 7.110155 TCCAATGGAATCTTTTGTACTACTCC 58.890 38.462 0.00 0.00 0.00 3.85
6301 6539 8.561738 TTCCAATGGAATCTTTTGTACTACTC 57.438 34.615 11.23 0.00 36.71 2.59
6302 6540 8.934023 TTTCCAATGGAATCTTTTGTACTACT 57.066 30.769 16.30 0.00 41.71 2.57
6303 6541 9.974980 TTTTTCCAATGGAATCTTTTGTACTAC 57.025 29.630 16.30 0.00 41.71 2.73
6340 6578 8.827832 TTGTCCTTTGATTCATAGGATTGAAT 57.172 30.769 23.34 0.00 46.39 2.57
6341 6579 8.522830 GTTTGTCCTTTGATTCATAGGATTGAA 58.477 33.333 23.34 16.51 41.93 2.69
6342 6580 7.148255 CGTTTGTCCTTTGATTCATAGGATTGA 60.148 37.037 23.34 12.78 41.93 2.57
6343 6581 6.968904 CGTTTGTCCTTTGATTCATAGGATTG 59.031 38.462 23.34 11.50 41.93 2.67
6344 6582 6.659242 ACGTTTGTCCTTTGATTCATAGGATT 59.341 34.615 23.34 6.76 41.93 3.01
6345 6583 6.180472 ACGTTTGTCCTTTGATTCATAGGAT 58.820 36.000 23.34 8.45 41.93 3.24
6346 6584 5.556915 ACGTTTGTCCTTTGATTCATAGGA 58.443 37.500 18.57 18.57 38.81 2.94
6347 6585 5.880054 ACGTTTGTCCTTTGATTCATAGG 57.120 39.130 14.95 14.95 34.61 2.57
6348 6586 6.816640 TCCTACGTTTGTCCTTTGATTCATAG 59.183 38.462 0.00 0.00 0.00 2.23
6349 6587 6.703319 TCCTACGTTTGTCCTTTGATTCATA 58.297 36.000 0.00 0.00 0.00 2.15
6350 6588 5.556915 TCCTACGTTTGTCCTTTGATTCAT 58.443 37.500 0.00 0.00 0.00 2.57
6351 6589 4.963373 TCCTACGTTTGTCCTTTGATTCA 58.037 39.130 0.00 0.00 0.00 2.57
6352 6590 5.934935 TTCCTACGTTTGTCCTTTGATTC 57.065 39.130 0.00 0.00 0.00 2.52
6353 6591 6.702716 TTTTCCTACGTTTGTCCTTTGATT 57.297 33.333 0.00 0.00 0.00 2.57
6354 6592 6.702716 TTTTTCCTACGTTTGTCCTTTGAT 57.297 33.333 0.00 0.00 0.00 2.57
6355 6593 6.702716 ATTTTTCCTACGTTTGTCCTTTGA 57.297 33.333 0.00 0.00 0.00 2.69
6356 6594 6.419710 GGAATTTTTCCTACGTTTGTCCTTTG 59.580 38.462 0.00 0.00 46.57 2.77
6357 6595 6.509656 GGAATTTTTCCTACGTTTGTCCTTT 58.490 36.000 0.00 0.00 46.57 3.11
6358 6596 6.080648 GGAATTTTTCCTACGTTTGTCCTT 57.919 37.500 0.00 0.00 46.57 3.36
6359 6597 5.700722 GGAATTTTTCCTACGTTTGTCCT 57.299 39.130 0.00 0.00 46.57 3.85
6371 6609 7.525688 GATTGAAATCCTTCGGAATTTTTCC 57.474 36.000 13.19 0.00 46.62 3.13
6388 6626 9.989296 TTCTATAGGATTTTTGGAGGATTGAAA 57.011 29.630 0.00 0.00 0.00 2.69
6392 6630 9.593565 GGAATTCTATAGGATTTTTGGAGGATT 57.406 33.333 7.72 0.00 0.00 3.01
6393 6631 8.964351 AGGAATTCTATAGGATTTTTGGAGGAT 58.036 33.333 7.72 0.00 0.00 3.24
6394 6632 8.350180 AGGAATTCTATAGGATTTTTGGAGGA 57.650 34.615 7.72 0.00 0.00 3.71
6395 6633 9.426534 AAAGGAATTCTATAGGATTTTTGGAGG 57.573 33.333 7.72 0.00 0.00 4.30
6397 6635 9.989296 TCAAAGGAATTCTATAGGATTTTTGGA 57.011 29.630 20.90 13.66 0.00 3.53
6419 6657 6.933514 AATTAAGGGCTCCTTTGATTCAAA 57.066 33.333 11.19 11.19 41.69 2.69
6420 6658 6.700352 CAAATTAAGGGCTCCTTTGATTCAA 58.300 36.000 11.15 0.00 41.69 2.69
6421 6659 5.337491 GCAAATTAAGGGCTCCTTTGATTCA 60.337 40.000 11.15 0.00 41.69 2.57
6422 6660 5.111989 GCAAATTAAGGGCTCCTTTGATTC 58.888 41.667 11.15 1.22 41.69 2.52
6423 6661 4.531732 TGCAAATTAAGGGCTCCTTTGATT 59.468 37.500 11.15 9.44 41.69 2.57
6424 6662 4.095946 TGCAAATTAAGGGCTCCTTTGAT 58.904 39.130 11.15 4.82 41.69 2.57
6425 6663 3.505386 TGCAAATTAAGGGCTCCTTTGA 58.495 40.909 11.15 2.95 41.69 2.69
6426 6664 3.959535 TGCAAATTAAGGGCTCCTTTG 57.040 42.857 11.15 5.67 41.69 2.77
6427 6665 6.213397 ACTTTATGCAAATTAAGGGCTCCTTT 59.787 34.615 11.15 0.00 41.69 3.11
6428 6666 5.721480 ACTTTATGCAAATTAAGGGCTCCTT 59.279 36.000 10.76 10.76 46.63 3.36
6429 6667 5.272402 ACTTTATGCAAATTAAGGGCTCCT 58.728 37.500 0.00 0.00 33.87 3.69
6430 6668 5.598416 ACTTTATGCAAATTAAGGGCTCC 57.402 39.130 0.00 0.00 0.00 4.70
6431 6669 7.905604 AAAACTTTATGCAAATTAAGGGCTC 57.094 32.000 0.00 0.00 0.00 4.70
6432 6670 7.117667 CGAAAAACTTTATGCAAATTAAGGGCT 59.882 33.333 0.00 0.00 0.00 5.19
6433 6671 7.095397 ACGAAAAACTTTATGCAAATTAAGGGC 60.095 33.333 0.00 0.00 0.00 5.19
6457 6695 4.993029 AGAATCCTTAACTCTGGAGACG 57.007 45.455 4.49 0.00 35.63 4.18
7097 7342 0.389391 ATCCGACCCAAGACATAGCG 59.611 55.000 0.00 0.00 0.00 4.26
7102 7347 5.839063 AGATAAAGATATCCGACCCAAGACA 59.161 40.000 0.00 0.00 39.02 3.41
7144 7389 1.202879 CCATTTTATCTAGCCCGGGCA 60.203 52.381 45.13 29.46 44.88 5.36
7148 7393 5.313712 ACCATAACCATTTTATCTAGCCCG 58.686 41.667 0.00 0.00 0.00 6.13
7215 7461 5.650266 TCTTTTGAGCAAGTAAGTGACCAAA 59.350 36.000 0.00 0.00 0.00 3.28
7220 7466 5.532406 AGCATTCTTTTGAGCAAGTAAGTGA 59.468 36.000 0.00 0.00 0.00 3.41
7223 7469 7.369803 TCTAGCATTCTTTTGAGCAAGTAAG 57.630 36.000 0.00 0.00 0.00 2.34
7243 7489 3.345714 CGCTAAATTGTGCGCTTTCTAG 58.654 45.455 9.73 3.34 45.50 2.43
7280 7606 0.462403 TACCGCATTTTAGCCCGGAC 60.462 55.000 0.73 0.00 43.20 4.79
7282 7608 1.314730 AATACCGCATTTTAGCCCGG 58.685 50.000 0.00 0.00 45.80 5.73
7314 7640 6.547510 AGGCTGATTGGTTTAAGGTCAATATC 59.452 38.462 0.00 0.00 32.05 1.63
7349 8376 4.994852 TGAACGGAGGAAAACATTCTACAG 59.005 41.667 0.00 0.00 0.00 2.74
7358 8385 4.406001 GTTCAGATGAACGGAGGAAAAC 57.594 45.455 9.76 0.00 43.97 2.43
7386 8419 1.328680 CCAGAGCCGAATTGAATGTCG 59.671 52.381 0.00 3.79 37.01 4.35
7601 8635 2.963498 GGAACACTAGTTTCGCCAAC 57.037 50.000 0.00 0.00 38.30 3.77
7614 8648 5.518487 ACAAATTTCATGTGAAACGGAACAC 59.482 36.000 10.11 0.00 45.55 3.32
7630 8664 4.023536 TCCAAAGCGTACCTGACAAATTTC 60.024 41.667 0.00 0.00 0.00 2.17
7641 8675 2.758009 TGTTAGTGTCCAAAGCGTACC 58.242 47.619 0.00 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.