Multiple sequence alignment - TraesCS2D01G342300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G342300 chr2D 100.000 9888 0 0 1 9888 437911513 437901626 0.000000e+00 18260.0
1 TraesCS2D01G342300 chr2D 92.000 125 7 2 859 980 437910691 437910567 1.320000e-38 172.0
2 TraesCS2D01G342300 chr2B 96.437 2217 64 14 3043 5251 514351458 514349249 0.000000e+00 3642.0
3 TraesCS2D01G342300 chr2B 96.116 1828 37 9 5639 7461 514348494 514346696 0.000000e+00 2952.0
4 TraesCS2D01G342300 chr2B 92.721 1786 77 21 1288 3044 514353343 514351582 0.000000e+00 2529.0
5 TraesCS2D01G342300 chr2B 93.176 1656 69 18 7576 9220 514346698 514345076 0.000000e+00 2392.0
6 TraesCS2D01G342300 chr2B 95.031 644 29 2 1 644 514370437 514369797 0.000000e+00 1009.0
7 TraesCS2D01G342300 chr2B 87.140 451 31 14 9204 9645 514345064 514344632 4.150000e-133 486.0
8 TraesCS2D01G342300 chr2B 92.776 263 8 2 5255 5510 514348858 514348600 4.360000e-98 370.0
9 TraesCS2D01G342300 chr2B 91.103 281 10 7 932 1198 514353654 514353375 5.640000e-97 366.0
10 TraesCS2D01G342300 chr2B 90.217 184 5 8 665 846 514353827 514353655 2.780000e-55 228.0
11 TraesCS2D01G342300 chr2B 85.405 185 16 9 9644 9824 514344601 514344424 2.190000e-41 182.0
12 TraesCS2D01G342300 chr2B 93.617 47 2 1 7772 7818 545770640 545770685 1.780000e-07 69.4
13 TraesCS2D01G342300 chr2A 91.645 2346 103 37 7576 9886 550870596 550872883 0.000000e+00 3160.0
14 TraesCS2D01G342300 chr2A 92.140 2023 79 33 3538 5487 550866833 550868848 0.000000e+00 2782.0
15 TraesCS2D01G342300 chr2A 95.112 1780 59 7 5685 7461 550868844 550870598 0.000000e+00 2780.0
16 TraesCS2D01G342300 chr2A 95.014 1063 45 6 1730 2788 550865000 550866058 0.000000e+00 1663.0
17 TraesCS2D01G342300 chr2A 95.143 700 25 6 2786 3478 550866138 550866835 0.000000e+00 1096.0
18 TraesCS2D01G342300 chr2A 89.610 847 39 17 932 1731 550864074 550864918 0.000000e+00 1031.0
19 TraesCS2D01G342300 chr2A 95.902 366 15 0 1 366 550860773 550861138 2.380000e-165 593.0
20 TraesCS2D01G342300 chr2A 91.809 293 21 3 353 644 550861298 550861588 1.200000e-108 405.0
21 TraesCS2D01G342300 chr2A 97.561 123 2 1 7457 7579 606523807 606523686 1.010000e-49 209.0
22 TraesCS2D01G342300 chr2A 87.654 162 4 3 685 846 550863934 550864079 3.670000e-39 174.0
23 TraesCS2D01G342300 chr2A 76.948 308 35 13 7892 8198 607916485 607916757 1.040000e-29 143.0
24 TraesCS2D01G342300 chr7A 83.937 442 46 20 7776 8208 19449903 19450328 5.560000e-107 399.0
25 TraesCS2D01G342300 chr7A 94.000 50 1 2 5897 5945 246641230 246641182 3.830000e-09 75.0
26 TraesCS2D01G342300 chr3D 83.962 424 49 13 7776 8191 558220470 558220058 1.200000e-103 388.0
27 TraesCS2D01G342300 chr3A 83.688 423 48 19 7776 8191 694095420 694095012 7.250000e-101 379.0
28 TraesCS2D01G342300 chr3A 93.284 134 5 4 7457 7588 484107153 484107284 2.820000e-45 195.0
29 TraesCS2D01G342300 chr3B 83.055 419 57 11 7776 8191 181782626 181783033 1.570000e-97 368.0
30 TraesCS2D01G342300 chr5D 81.984 383 55 12 7775 8151 547998698 547999072 7.460000e-81 313.0
31 TraesCS2D01G342300 chr5D 96.721 122 2 2 7459 7579 461071642 461071762 1.680000e-47 202.0
32 TraesCS2D01G342300 chr4A 81.818 385 55 13 7775 8152 618622762 618623138 9.650000e-80 309.0
33 TraesCS2D01G342300 chr1B 81.501 373 55 10 7832 8201 411413601 411413962 2.700000e-75 294.0
34 TraesCS2D01G342300 chr4D 96.774 124 2 2 7459 7581 367720769 367720891 1.300000e-48 206.0
35 TraesCS2D01G342300 chr4D 93.893 131 6 2 7450 7580 422502147 422502019 7.830000e-46 196.0
36 TraesCS2D01G342300 chr4D 94.531 128 6 1 7457 7584 494876032 494875906 7.830000e-46 196.0
37 TraesCS2D01G342300 chr1A 94.656 131 6 1 7457 7587 498452788 498452659 1.680000e-47 202.0
38 TraesCS2D01G342300 chr7B 95.935 123 4 1 7457 7579 589467039 589467160 2.180000e-46 198.0
39 TraesCS2D01G342300 chr7B 94.000 50 1 2 5897 5945 32806744 32806792 3.830000e-09 75.0
40 TraesCS2D01G342300 chr7B 94.000 50 1 2 5897 5945 380262506 380262554 3.830000e-09 75.0
41 TraesCS2D01G342300 chr7B 92.308 52 2 2 5895 5945 410849050 410849000 1.380000e-08 73.1
42 TraesCS2D01G342300 chr1D 94.615 130 4 3 7459 7587 470620965 470620838 2.180000e-46 198.0
43 TraesCS2D01G342300 chr6B 94.000 50 1 2 5897 5945 35297573 35297621 3.830000e-09 75.0
44 TraesCS2D01G342300 chr5A 94.000 50 1 2 5897 5945 291532320 291532368 3.830000e-09 75.0
45 TraesCS2D01G342300 chr4B 94.000 50 1 2 5897 5945 208754420 208754372 3.830000e-09 75.0
46 TraesCS2D01G342300 chr6A 92.308 52 2 2 5895 5945 82094723 82094773 1.380000e-08 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G342300 chr2D 437901626 437911513 9887 True 9216.000000 18260 96.000000 1 9888 2 chr2D.!!$R1 9887
1 TraesCS2D01G342300 chr2B 514344424 514353827 9403 True 1460.777778 3642 91.676778 665 9824 9 chr2B.!!$R2 9159
2 TraesCS2D01G342300 chr2B 514369797 514370437 640 True 1009.000000 1009 95.031000 1 644 1 chr2B.!!$R1 643
3 TraesCS2D01G342300 chr2A 550860773 550872883 12110 False 1520.444444 3160 92.669889 1 9886 9 chr2A.!!$F2 9885

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
601 776 0.035598 TTTTGATTGAGGGGTCGCGA 59.964 50.000 3.71 3.71 0.00 5.87 F
867 3361 0.178301 AAGTAAGCTCTTAGCCCCGC 59.822 55.000 0.00 0.00 43.77 6.13 F
902 3396 0.178301 AAGTAAGCTCTTAGCCCCGC 59.822 55.000 0.00 0.00 43.77 6.13 F
2080 4707 0.036732 TCATGTCTTTGCGCTTCCCT 59.963 50.000 9.73 0.00 0.00 4.20 F
3012 5732 2.224079 CGTTCAGGACACAGAATGGTTG 59.776 50.000 0.00 0.00 43.62 3.77 F
4029 6951 3.883830 TGTGGCAACTGATGTTTTTGT 57.116 38.095 0.00 0.00 33.52 2.83 F
4521 7474 1.048601 TTCGAGACCTGCATATCCCC 58.951 55.000 0.00 0.00 0.00 4.81 F
5568 8949 1.344087 GGGGGAGTACTCTTGGGATCA 60.344 57.143 21.88 0.00 0.00 2.92 F
7552 10938 0.110486 TTGAGGGACAAGCTTGGGAC 59.890 55.000 29.18 18.90 34.20 4.46 F
7570 10956 0.179040 ACAAGCTTTTTCCGGACGGA 60.179 50.000 1.83 9.76 43.52 4.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2063 4690 0.250901 ACAGGGAAGCGCAAAGACAT 60.251 50.000 11.47 0.00 0.00 3.06 R
2068 4695 2.843401 TTACTACAGGGAAGCGCAAA 57.157 45.000 11.47 0.00 0.00 3.68 R
2900 5620 3.068024 CCTGCAGTAGAAAACAAGCCAAA 59.932 43.478 13.81 0.00 32.26 3.28 R
3536 6391 2.477189 CGCCACGAGTTCTTTTTGTGTT 60.477 45.455 0.00 0.00 0.00 3.32 R
4505 7458 1.004440 GCGGGGATATGCAGGTCTC 60.004 63.158 0.00 0.00 0.00 3.36 R
5132 8092 1.291132 GACAGACGAATAAGCAGGGC 58.709 55.000 0.00 0.00 0.00 5.19 R
5627 9008 1.348036 GCCAGTAGAAGTGGAACCAGT 59.652 52.381 4.94 0.00 41.28 4.00 R
7559 10945 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13 R
8759 12163 0.038159 GTTGAGTGTGCTCGTAGGCT 60.038 55.000 0.00 0.00 44.48 4.58 R
9492 12937 0.378257 AATTACGCGGCATGCTCTTG 59.622 50.000 18.92 7.87 43.27 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 0.318441 TGGTGAGGAAGTTCTCTGCG 59.682 55.000 2.25 0.00 34.98 5.18
107 108 2.044946 AGATTTGACCAGGCGGCC 60.045 61.111 12.11 12.11 34.57 6.13
187 188 2.284699 CTCCTCCAACTCCCCCGT 60.285 66.667 0.00 0.00 0.00 5.28
391 566 1.079127 CGAGTTGCCGTCCCAGAAT 60.079 57.895 0.00 0.00 0.00 2.40
503 678 3.056313 GCTGGCTTGCACGGAATCC 62.056 63.158 0.00 0.00 0.00 3.01
519 694 3.054508 GGAATCCATCTCCATCTCCATCC 60.055 52.174 0.00 0.00 32.77 3.51
593 768 9.249457 GTTAGGTTTTTCTCTTTTTGATTGAGG 57.751 33.333 0.00 0.00 0.00 3.86
595 770 5.991606 GGTTTTTCTCTTTTTGATTGAGGGG 59.008 40.000 0.00 0.00 0.00 4.79
597 772 6.405278 TTTTCTCTTTTTGATTGAGGGGTC 57.595 37.500 0.00 0.00 0.00 4.46
599 774 2.159382 TCTTTTTGATTGAGGGGTCGC 58.841 47.619 0.00 0.00 0.00 5.19
601 776 0.035598 TTTTGATTGAGGGGTCGCGA 59.964 50.000 3.71 3.71 0.00 5.87
602 777 0.672401 TTTGATTGAGGGGTCGCGAC 60.672 55.000 30.67 30.67 0.00 5.19
616 791 4.099170 CGACTCGCGAGGTTCGGT 62.099 66.667 36.93 18.35 44.57 4.69
623 798 1.492319 CGCGAGGTTCGGTTGTTTCA 61.492 55.000 0.00 0.00 40.84 2.69
640 815 8.484799 GGTTGTTTCATTTCCGTTTTCTTTATC 58.515 33.333 0.00 0.00 0.00 1.75
676 851 1.686587 GGGTGTTTTCTTGGTTGGAGG 59.313 52.381 0.00 0.00 0.00 4.30
680 855 4.501400 GGTGTTTTCTTGGTTGGAGGAATG 60.501 45.833 0.00 0.00 0.00 2.67
681 856 4.340950 GTGTTTTCTTGGTTGGAGGAATGA 59.659 41.667 0.00 0.00 0.00 2.57
682 857 4.959210 TGTTTTCTTGGTTGGAGGAATGAA 59.041 37.500 0.00 0.00 0.00 2.57
783 3269 4.101448 CCGGCTCCACTCCCCAAG 62.101 72.222 0.00 0.00 0.00 3.61
784 3270 3.322466 CGGCTCCACTCCCCAAGT 61.322 66.667 0.00 0.00 39.44 3.16
785 3271 2.671682 GGCTCCACTCCCCAAGTC 59.328 66.667 0.00 0.00 35.45 3.01
795 3281 1.231641 CCCCAAGTCCCAAACACCA 59.768 57.895 0.00 0.00 0.00 4.17
856 3350 4.778143 CGCCGCCCCAAGTAAGCT 62.778 66.667 0.00 0.00 0.00 3.74
857 3351 2.824489 GCCGCCCCAAGTAAGCTC 60.824 66.667 0.00 0.00 0.00 4.09
858 3352 2.990479 CCGCCCCAAGTAAGCTCT 59.010 61.111 0.00 0.00 0.00 4.09
859 3353 1.299976 CCGCCCCAAGTAAGCTCTT 59.700 57.895 0.00 0.00 0.00 2.85
860 3354 0.539986 CCGCCCCAAGTAAGCTCTTA 59.460 55.000 0.00 0.00 0.00 2.10
861 3355 1.473434 CCGCCCCAAGTAAGCTCTTAG 60.473 57.143 0.00 0.00 0.00 2.18
862 3356 1.669604 GCCCCAAGTAAGCTCTTAGC 58.330 55.000 0.00 0.00 42.84 3.09
863 3357 1.747552 GCCCCAAGTAAGCTCTTAGCC 60.748 57.143 0.00 0.00 43.77 3.93
864 3358 1.134068 CCCCAAGTAAGCTCTTAGCCC 60.134 57.143 0.00 0.00 43.77 5.19
865 3359 1.134068 CCCAAGTAAGCTCTTAGCCCC 60.134 57.143 0.00 0.00 43.77 5.80
866 3360 1.473434 CCAAGTAAGCTCTTAGCCCCG 60.473 57.143 0.00 0.00 43.77 5.73
867 3361 0.178301 AAGTAAGCTCTTAGCCCCGC 59.822 55.000 0.00 0.00 43.77 6.13
868 3362 1.227586 GTAAGCTCTTAGCCCCGCC 60.228 63.158 0.00 0.00 43.77 6.13
869 3363 2.792947 TAAGCTCTTAGCCCCGCCG 61.793 63.158 0.00 0.00 43.77 6.46
891 3385 4.778143 CGCCGCCCCAAGTAAGCT 62.778 66.667 0.00 0.00 0.00 3.74
892 3386 2.824489 GCCGCCCCAAGTAAGCTC 60.824 66.667 0.00 0.00 0.00 4.09
893 3387 2.990479 CCGCCCCAAGTAAGCTCT 59.010 61.111 0.00 0.00 0.00 4.09
894 3388 1.299976 CCGCCCCAAGTAAGCTCTT 59.700 57.895 0.00 0.00 0.00 2.85
895 3389 0.539986 CCGCCCCAAGTAAGCTCTTA 59.460 55.000 0.00 0.00 0.00 2.10
896 3390 1.473434 CCGCCCCAAGTAAGCTCTTAG 60.473 57.143 0.00 0.00 0.00 2.18
897 3391 1.669604 GCCCCAAGTAAGCTCTTAGC 58.330 55.000 0.00 0.00 42.84 3.09
898 3392 1.747552 GCCCCAAGTAAGCTCTTAGCC 60.748 57.143 0.00 0.00 43.77 3.93
899 3393 1.134068 CCCCAAGTAAGCTCTTAGCCC 60.134 57.143 0.00 0.00 43.77 5.19
900 3394 1.134068 CCCAAGTAAGCTCTTAGCCCC 60.134 57.143 0.00 0.00 43.77 5.80
901 3395 1.473434 CCAAGTAAGCTCTTAGCCCCG 60.473 57.143 0.00 0.00 43.77 5.73
902 3396 0.178301 AAGTAAGCTCTTAGCCCCGC 59.822 55.000 0.00 0.00 43.77 6.13
903 3397 1.227586 GTAAGCTCTTAGCCCCGCC 60.228 63.158 0.00 0.00 43.77 6.13
904 3398 1.382695 TAAGCTCTTAGCCCCGCCT 60.383 57.895 0.00 0.00 43.77 5.52
905 3399 1.400530 TAAGCTCTTAGCCCCGCCTC 61.401 60.000 0.00 0.00 43.77 4.70
906 3400 4.243008 GCTCTTAGCCCCGCCTCC 62.243 72.222 0.00 0.00 34.48 4.30
907 3401 3.917760 CTCTTAGCCCCGCCTCCG 61.918 72.222 0.00 0.00 0.00 4.63
926 3420 4.778143 CGCCGCCCCAAGTAAGCT 62.778 66.667 0.00 0.00 0.00 3.74
927 3421 2.824489 GCCGCCCCAAGTAAGCTC 60.824 66.667 0.00 0.00 0.00 4.09
928 3422 2.990479 CCGCCCCAAGTAAGCTCT 59.010 61.111 0.00 0.00 0.00 4.09
929 3423 1.299976 CCGCCCCAAGTAAGCTCTT 59.700 57.895 0.00 0.00 0.00 2.85
930 3424 0.539986 CCGCCCCAAGTAAGCTCTTA 59.460 55.000 0.00 0.00 0.00 2.10
931 3425 1.473434 CCGCCCCAAGTAAGCTCTTAG 60.473 57.143 0.00 0.00 0.00 2.18
932 3426 1.669604 GCCCCAAGTAAGCTCTTAGC 58.330 55.000 0.00 0.00 42.84 3.09
933 3427 1.747552 GCCCCAAGTAAGCTCTTAGCC 60.748 57.143 0.00 0.00 43.77 3.93
934 3428 1.134068 CCCCAAGTAAGCTCTTAGCCC 60.134 57.143 0.00 0.00 43.77 5.19
935 3429 1.134068 CCCAAGTAAGCTCTTAGCCCC 60.134 57.143 0.00 0.00 43.77 5.80
936 3430 1.473434 CCAAGTAAGCTCTTAGCCCCG 60.473 57.143 0.00 0.00 43.77 5.73
937 3431 0.178301 AAGTAAGCTCTTAGCCCCGC 59.822 55.000 0.00 0.00 43.77 6.13
938 3432 1.227586 GTAAGCTCTTAGCCCCGCC 60.228 63.158 0.00 0.00 43.77 6.13
939 3433 1.382695 TAAGCTCTTAGCCCCGCCT 60.383 57.895 0.00 0.00 43.77 5.52
940 3434 1.400530 TAAGCTCTTAGCCCCGCCTC 61.401 60.000 0.00 0.00 43.77 4.70
941 3435 4.243008 GCTCTTAGCCCCGCCTCC 62.243 72.222 0.00 0.00 34.48 4.30
942 3436 3.917760 CTCTTAGCCCCGCCTCCG 61.918 72.222 0.00 0.00 0.00 4.63
991 3485 0.179094 TCCGCCGCGAATTGAAGTAT 60.179 50.000 15.93 0.00 0.00 2.12
993 3487 1.209128 CGCCGCGAATTGAAGTATCT 58.791 50.000 8.23 0.00 0.00 1.98
1005 3499 4.542906 TGAAGTATCTGGAGAGATGGGA 57.457 45.455 0.00 0.00 39.44 4.37
1020 3514 4.990526 AGATGGGAAAGAAGCAGAAGAAA 58.009 39.130 0.00 0.00 0.00 2.52
1196 3706 0.603172 CAGTGCTTCACTCTGCTGCT 60.603 55.000 0.00 0.00 43.43 4.24
1281 3796 9.043678 CGAAATTATGGAACGTTTGTTTAGTAC 57.956 33.333 0.46 0.00 38.78 2.73
1285 3800 9.709495 ATTATGGAACGTTTGTTTAGTACTACA 57.291 29.630 0.46 0.00 38.78 2.74
1294 3809 3.737266 TGTTTAGTACTACACGTTGCTGC 59.263 43.478 13.17 0.00 0.00 5.25
1304 3819 0.250467 ACGTTGCTGCACTTCATCCT 60.250 50.000 0.00 0.00 0.00 3.24
1324 3839 3.701542 CCTCTTTTGCTTATTTCCCCCTC 59.298 47.826 0.00 0.00 0.00 4.30
1325 3840 3.352648 TCTTTTGCTTATTTCCCCCTCG 58.647 45.455 0.00 0.00 0.00 4.63
1326 3841 1.470051 TTTGCTTATTTCCCCCTCGC 58.530 50.000 0.00 0.00 0.00 5.03
1339 3854 2.768834 CCTCGCTGGGCTTTACTTC 58.231 57.895 0.00 0.00 0.00 3.01
1449 3964 2.743928 CGGTGAGGCCTTGCAGAC 60.744 66.667 6.77 0.00 34.25 3.51
1453 3968 0.321671 GTGAGGCCTTGCAGACACTA 59.678 55.000 6.77 0.00 0.00 2.74
1485 4000 8.908786 AATGACAGTTACTGAAAGAATCTTCA 57.091 30.769 20.07 8.97 37.43 3.02
1486 4001 9.512588 AATGACAGTTACTGAAAGAATCTTCAT 57.487 29.630 20.07 10.82 37.43 2.57
1488 4003 9.645059 TGACAGTTACTGAAAGAATCTTCATAG 57.355 33.333 20.07 0.00 37.43 2.23
1504 4039 5.839262 TTCATAGTTGAAGCTGTGTAACG 57.161 39.130 0.00 0.00 36.87 3.18
1538 4073 3.503363 GCTTGTGAATCTTGTGATGGTCA 59.497 43.478 0.00 0.00 32.44 4.02
1558 4098 5.122396 GGTCATGTTAGGTGCTTAGAAGTTG 59.878 44.000 0.00 0.00 0.00 3.16
1562 4102 6.614694 TGTTAGGTGCTTAGAAGTTGGATA 57.385 37.500 0.00 0.00 0.00 2.59
1565 4105 4.844884 AGGTGCTTAGAAGTTGGATAACC 58.155 43.478 0.00 0.00 37.52 2.85
1592 4134 5.698545 GTCTCATTGTATATGAGCAAGGTCC 59.301 44.000 9.37 0.00 43.79 4.46
1605 4147 2.096013 GCAAGGTCCGCAAAATCTCTAC 59.904 50.000 0.00 0.00 0.00 2.59
1611 4153 1.471676 CCGCAAAATCTCTACGAGGCT 60.472 52.381 0.00 0.00 0.00 4.58
1619 4161 6.716934 AAATCTCTACGAGGCTATGAGAAA 57.283 37.500 10.66 0.00 37.34 2.52
1623 4165 7.113658 TCTCTACGAGGCTATGAGAAATTTT 57.886 36.000 0.00 0.00 31.80 1.82
1627 4169 8.475639 TCTACGAGGCTATGAGAAATTTTAGTT 58.524 33.333 0.00 0.00 0.00 2.24
1712 4254 1.069978 TGTGGAGTGCTTTCGACATGA 59.930 47.619 0.00 0.00 31.98 3.07
1782 4408 7.578310 ATTGCAAATGCTACACAGAAGATAT 57.422 32.000 1.71 0.00 42.66 1.63
1810 4436 5.528043 TGATTTTTCAGCCAAGCAAGTAA 57.472 34.783 0.00 0.00 0.00 2.24
1842 4468 5.572896 GGAGATTTAGTTGCCAAATTTGACG 59.427 40.000 19.86 4.95 0.00 4.35
1844 4470 5.920273 AGATTTAGTTGCCAAATTTGACGTG 59.080 36.000 19.86 3.85 0.00 4.49
1883 4509 4.273480 CAGCTTACCATAAACCCATCGAAG 59.727 45.833 0.00 0.00 0.00 3.79
1969 4595 3.689161 TCTGTAATCTGGACATTTTGCCG 59.311 43.478 0.00 0.00 0.00 5.69
2079 4706 0.449388 CTCATGTCTTTGCGCTTCCC 59.551 55.000 9.73 0.00 0.00 3.97
2080 4707 0.036732 TCATGTCTTTGCGCTTCCCT 59.963 50.000 9.73 0.00 0.00 4.20
2092 4719 5.386958 TGCGCTTCCCTGTAGTAATATAG 57.613 43.478 9.73 0.00 0.00 1.31
2158 4785 6.810182 CCTCTTGAAGGCAAATAATTTCAGTG 59.190 38.462 0.00 0.00 38.67 3.66
2180 4807 6.652481 AGTGGTGCTGAATATTGTCTATATGC 59.348 38.462 0.00 0.00 29.74 3.14
2391 5018 8.125448 GTGCTATTTCAGTCAACTGGATTTATC 58.875 37.037 10.13 0.00 43.91 1.75
2710 5342 2.548493 CCTGGGAGTTTGTTGCCATTTG 60.548 50.000 0.00 0.00 37.96 2.32
2744 5376 5.717119 ATAGAAGGCTCTTTACCATGGTT 57.283 39.130 25.38 7.42 32.70 3.67
3012 5732 2.224079 CGTTCAGGACACAGAATGGTTG 59.776 50.000 0.00 0.00 43.62 3.77
3053 5899 6.420638 ACCACTTGTTAACTATTATGGTCCC 58.579 40.000 7.22 0.00 34.02 4.46
3157 6003 9.823647 CATATTAGGTAGTTCTGTTGAATGAGT 57.176 33.333 0.00 0.00 34.40 3.41
3317 6171 7.337184 TGTGTAAACTGGTATGTGTTTCTTTCA 59.663 33.333 0.00 0.00 37.53 2.69
3391 6245 6.608002 CACTCTTAGGGAAGTGAGGTTAGTAT 59.392 42.308 0.00 0.00 34.50 2.12
3489 6344 7.779754 TGTCCTAGTTACAAGTTATGTACCA 57.220 36.000 0.00 0.00 44.11 3.25
3490 6345 7.833786 TGTCCTAGTTACAAGTTATGTACCAG 58.166 38.462 0.00 0.00 44.11 4.00
3491 6346 7.452501 TGTCCTAGTTACAAGTTATGTACCAGT 59.547 37.037 0.00 0.00 44.11 4.00
3492 6347 8.309656 GTCCTAGTTACAAGTTATGTACCAGTT 58.690 37.037 0.00 0.00 44.11 3.16
3493 6348 8.308931 TCCTAGTTACAAGTTATGTACCAGTTG 58.691 37.037 0.00 0.00 44.11 3.16
3494 6349 8.308931 CCTAGTTACAAGTTATGTACCAGTTGA 58.691 37.037 10.01 0.00 44.11 3.18
3495 6350 9.355215 CTAGTTACAAGTTATGTACCAGTTGAG 57.645 37.037 10.01 0.00 44.11 3.02
3496 6351 7.732996 AGTTACAAGTTATGTACCAGTTGAGT 58.267 34.615 10.01 0.00 44.11 3.41
3497 6352 8.863086 AGTTACAAGTTATGTACCAGTTGAGTA 58.137 33.333 10.01 0.00 44.11 2.59
3498 6353 9.136952 GTTACAAGTTATGTACCAGTTGAGTAG 57.863 37.037 10.01 0.00 44.11 2.57
3499 6354 7.299246 ACAAGTTATGTACCAGTTGAGTAGT 57.701 36.000 10.01 0.00 41.63 2.73
3500 6355 8.413309 ACAAGTTATGTACCAGTTGAGTAGTA 57.587 34.615 10.01 0.00 41.63 1.82
3501 6356 8.521176 ACAAGTTATGTACCAGTTGAGTAGTAG 58.479 37.037 10.01 0.00 41.63 2.57
3502 6357 8.521176 CAAGTTATGTACCAGTTGAGTAGTAGT 58.479 37.037 0.00 0.00 0.00 2.73
3503 6358 8.053026 AGTTATGTACCAGTTGAGTAGTAGTG 57.947 38.462 0.00 0.00 0.00 2.74
3504 6359 7.668886 AGTTATGTACCAGTTGAGTAGTAGTGT 59.331 37.037 0.00 0.00 0.00 3.55
3505 6360 8.950210 GTTATGTACCAGTTGAGTAGTAGTGTA 58.050 37.037 0.00 0.00 0.00 2.90
3506 6361 9.519191 TTATGTACCAGTTGAGTAGTAGTGTAA 57.481 33.333 0.00 0.00 0.00 2.41
3507 6362 7.206981 TGTACCAGTTGAGTAGTAGTGTAAC 57.793 40.000 0.00 0.00 0.00 2.50
3508 6363 6.772233 TGTACCAGTTGAGTAGTAGTGTAACA 59.228 38.462 0.00 0.00 41.43 2.41
3509 6364 6.328641 ACCAGTTGAGTAGTAGTGTAACAG 57.671 41.667 0.00 0.00 41.43 3.16
3510 6365 5.832060 ACCAGTTGAGTAGTAGTGTAACAGT 59.168 40.000 0.00 0.00 41.43 3.55
3511 6366 7.000472 ACCAGTTGAGTAGTAGTGTAACAGTA 59.000 38.462 0.00 0.00 41.43 2.74
3512 6367 7.668886 ACCAGTTGAGTAGTAGTGTAACAGTAT 59.331 37.037 0.00 0.00 41.43 2.12
3513 6368 8.521176 CCAGTTGAGTAGTAGTGTAACAGTATT 58.479 37.037 0.00 0.00 41.43 1.89
3518 6373 9.730705 TGAGTAGTAGTGTAACAGTATTACAGT 57.269 33.333 6.85 6.85 41.43 3.55
3524 6379 9.850628 GTAGTGTAACAGTATTACAGTTGATCA 57.149 33.333 6.95 0.00 41.43 2.92
3526 6381 9.587772 AGTGTAACAGTATTACAGTTGATCATC 57.412 33.333 13.16 0.00 41.43 2.92
3527 6382 8.532341 GTGTAACAGTATTACAGTTGATCATCG 58.468 37.037 13.16 0.00 35.77 3.84
3528 6383 8.463607 TGTAACAGTATTACAGTTGATCATCGA 58.536 33.333 13.16 0.00 30.38 3.59
3529 6384 9.297586 GTAACAGTATTACAGTTGATCATCGAA 57.702 33.333 13.16 0.00 30.38 3.71
3530 6385 7.757097 ACAGTATTACAGTTGATCATCGAAC 57.243 36.000 0.00 0.00 0.00 3.95
3531 6386 7.320399 ACAGTATTACAGTTGATCATCGAACA 58.680 34.615 0.00 0.00 0.00 3.18
3532 6387 7.817478 ACAGTATTACAGTTGATCATCGAACAA 59.183 33.333 0.00 0.00 0.00 2.83
3533 6388 8.655970 CAGTATTACAGTTGATCATCGAACAAA 58.344 33.333 0.00 0.00 0.00 2.83
3534 6389 8.873830 AGTATTACAGTTGATCATCGAACAAAG 58.126 33.333 0.00 0.00 0.00 2.77
3535 6390 7.905604 ATTACAGTTGATCATCGAACAAAGA 57.094 32.000 0.00 0.00 0.00 2.52
3536 6391 7.722795 TTACAGTTGATCATCGAACAAAGAA 57.277 32.000 0.00 0.00 0.00 2.52
3552 6469 6.927933 ACAAAGAAACACAAAAAGAACTCG 57.072 33.333 0.00 0.00 0.00 4.18
4000 6922 6.767902 GGGAGTGCTCTTGTTATGATTGATAA 59.232 38.462 0.00 0.00 0.00 1.75
4029 6951 3.883830 TGTGGCAACTGATGTTTTTGT 57.116 38.095 0.00 0.00 33.52 2.83
4040 6962 5.587043 ACTGATGTTTTTGTCGTAACAAGGA 59.413 36.000 0.00 0.00 45.72 3.36
4100 7022 8.534496 TGATATGGTGATAGATTGATGTACTGG 58.466 37.037 0.00 0.00 0.00 4.00
4205 7128 6.894682 TCAATAAGTGTGGCATAATACCTGA 58.105 36.000 0.00 0.00 0.00 3.86
4505 7458 9.579610 CTTGCCAATGTTTTAAGTTTTTATTCG 57.420 29.630 0.00 0.00 0.00 3.34
4521 7474 1.048601 TTCGAGACCTGCATATCCCC 58.951 55.000 0.00 0.00 0.00 4.81
4563 7516 3.094484 ACTTGTTTCCCACTTGAACCA 57.906 42.857 0.00 0.00 0.00 3.67
4834 7787 6.149142 AGCTGCTTCAAATCTTCAAACTCTAG 59.851 38.462 0.00 0.00 0.00 2.43
4920 7879 3.044235 TGAGCATGTTCATGAACGAGT 57.956 42.857 28.55 16.94 43.94 4.18
4961 7920 3.572255 ACAATCACCGTTGGTATGCTTTT 59.428 39.130 0.00 0.00 32.11 2.27
5144 8106 5.990120 ATTATTCATGGCCCTGCTTATTC 57.010 39.130 0.00 0.00 0.00 1.75
5248 8210 4.708726 ATTCATAGTCCTGCTTGTTTGC 57.291 40.909 0.00 0.00 0.00 3.68
5301 8650 2.352388 GTCCGGCAAATTACTGTAGCA 58.648 47.619 0.00 0.00 0.00 3.49
5349 8705 3.306989 GCAGCAGTCAGGCATACCATATA 60.307 47.826 0.00 0.00 39.06 0.86
5350 8706 4.624843 GCAGCAGTCAGGCATACCATATAT 60.625 45.833 0.00 0.00 39.06 0.86
5351 8707 5.395657 GCAGCAGTCAGGCATACCATATATA 60.396 44.000 0.00 0.00 39.06 0.86
5352 8708 6.687393 GCAGCAGTCAGGCATACCATATATAT 60.687 42.308 0.00 0.00 39.06 0.86
5510 8866 5.653255 ATTCCCTCTGTGCCATAATACTT 57.347 39.130 0.00 0.00 0.00 2.24
5511 8867 4.422073 TCCCTCTGTGCCATAATACTTG 57.578 45.455 0.00 0.00 0.00 3.16
5512 8868 3.780294 TCCCTCTGTGCCATAATACTTGT 59.220 43.478 0.00 0.00 0.00 3.16
5513 8869 4.130118 CCCTCTGTGCCATAATACTTGTC 58.870 47.826 0.00 0.00 0.00 3.18
5514 8870 3.804325 CCTCTGTGCCATAATACTTGTCG 59.196 47.826 0.00 0.00 0.00 4.35
5515 8871 4.433615 CTCTGTGCCATAATACTTGTCGT 58.566 43.478 0.00 0.00 0.00 4.34
5517 8873 3.266636 TGTGCCATAATACTTGTCGTGG 58.733 45.455 0.00 0.00 0.00 4.94
5518 8874 3.267483 GTGCCATAATACTTGTCGTGGT 58.733 45.455 0.00 0.00 0.00 4.16
5519 8875 3.687698 GTGCCATAATACTTGTCGTGGTT 59.312 43.478 0.00 0.00 0.00 3.67
5520 8876 4.155280 GTGCCATAATACTTGTCGTGGTTT 59.845 41.667 0.00 0.00 0.00 3.27
5521 8877 4.762765 TGCCATAATACTTGTCGTGGTTTT 59.237 37.500 0.00 0.00 0.00 2.43
5525 8881 7.808856 GCCATAATACTTGTCGTGGTTTTAAAA 59.191 33.333 0.00 0.00 0.00 1.52
5526 8882 9.120422 CCATAATACTTGTCGTGGTTTTAAAAC 57.880 33.333 20.58 20.58 38.17 2.43
5544 8925 9.504708 TTTTAAAACCACGAGAAGTATTATGGA 57.495 29.630 0.00 0.00 0.00 3.41
5549 8930 4.049186 CACGAGAAGTATTATGGAACGGG 58.951 47.826 0.00 0.00 0.00 5.28
5566 8947 3.656869 GGGGGAGTACTCTTGGGAT 57.343 57.895 21.88 0.00 0.00 3.85
5567 8948 1.425694 GGGGGAGTACTCTTGGGATC 58.574 60.000 21.88 3.81 0.00 3.36
5568 8949 1.344087 GGGGGAGTACTCTTGGGATCA 60.344 57.143 21.88 0.00 0.00 2.92
5569 8950 1.763545 GGGGAGTACTCTTGGGATCAC 59.236 57.143 21.88 1.22 0.00 3.06
5571 8952 3.108376 GGGAGTACTCTTGGGATCACTT 58.892 50.000 21.88 0.00 0.00 3.16
5572 8953 3.519913 GGGAGTACTCTTGGGATCACTTT 59.480 47.826 21.88 0.00 0.00 2.66
5574 8955 5.189145 GGGAGTACTCTTGGGATCACTTTTA 59.811 44.000 21.88 0.00 0.00 1.52
5575 8956 6.296259 GGGAGTACTCTTGGGATCACTTTTAA 60.296 42.308 21.88 0.00 0.00 1.52
5577 8958 7.829706 GGAGTACTCTTGGGATCACTTTTAATT 59.170 37.037 21.88 0.00 0.00 1.40
5581 8962 8.753497 ACTCTTGGGATCACTTTTAATTATCC 57.247 34.615 0.00 0.00 36.23 2.59
5584 8965 9.189156 TCTTGGGATCACTTTTAATTATCCAAG 57.811 33.333 0.00 0.00 38.28 3.61
5585 8966 7.346751 TGGGATCACTTTTAATTATCCAAGC 57.653 36.000 0.00 0.00 38.28 4.01
5586 8967 6.894654 TGGGATCACTTTTAATTATCCAAGCA 59.105 34.615 0.00 0.00 38.28 3.91
5587 8968 7.564660 TGGGATCACTTTTAATTATCCAAGCAT 59.435 33.333 0.00 0.00 38.28 3.79
5588 8969 9.077885 GGGATCACTTTTAATTATCCAAGCATA 57.922 33.333 0.00 0.00 38.28 3.14
5591 8972 9.918630 ATCACTTTTAATTATCCAAGCATATGC 57.081 29.630 20.36 20.36 42.49 3.14
5607 8988 6.657836 GCATATGCTTTGCTTTTCAAGAAT 57.342 33.333 20.64 0.00 37.14 2.40
5608 8989 7.068692 GCATATGCTTTGCTTTTCAAGAATT 57.931 32.000 20.64 0.00 37.14 2.17
5609 8990 6.959311 GCATATGCTTTGCTTTTCAAGAATTG 59.041 34.615 20.64 0.00 41.37 2.32
5610 8991 7.360607 GCATATGCTTTGCTTTTCAAGAATTGT 60.361 33.333 20.64 0.00 41.06 2.71
5621 9002 3.976793 CAAGAATTGTGCAGTGACAGT 57.023 42.857 0.00 0.00 42.34 3.55
5622 9003 3.881795 CAAGAATTGTGCAGTGACAGTC 58.118 45.455 0.00 0.00 42.34 3.51
5623 9004 3.482156 AGAATTGTGCAGTGACAGTCT 57.518 42.857 1.31 0.63 0.00 3.24
5624 9005 4.607293 AGAATTGTGCAGTGACAGTCTA 57.393 40.909 1.31 0.00 0.00 2.59
5625 9006 4.960938 AGAATTGTGCAGTGACAGTCTAA 58.039 39.130 1.31 0.00 0.00 2.10
5626 9007 4.752101 AGAATTGTGCAGTGACAGTCTAAC 59.248 41.667 1.31 0.00 0.00 2.34
5627 9008 3.535280 TTGTGCAGTGACAGTCTAACA 57.465 42.857 1.31 0.00 0.00 2.41
5628 9009 2.821546 TGTGCAGTGACAGTCTAACAC 58.178 47.619 1.31 5.97 35.15 3.32
5629 9010 2.430694 TGTGCAGTGACAGTCTAACACT 59.569 45.455 1.31 0.00 44.15 3.55
5918 9299 2.606826 GTGGTCGGACCCTTCCCT 60.607 66.667 23.81 0.00 38.99 4.20
5919 9300 2.606519 TGGTCGGACCCTTCCCTG 60.607 66.667 23.81 0.00 38.99 4.45
6047 9429 3.868619 TTTGTGGTATGGGGTATAGCC 57.131 47.619 12.79 12.79 38.66 3.93
6273 9655 3.040477 TGATGATACCATGGACTGCTCA 58.960 45.455 21.47 12.37 32.09 4.26
6789 10171 2.294512 CAGAACTCACCTTTGCTTTCCC 59.705 50.000 0.00 0.00 0.00 3.97
6993 10375 1.353022 CCCACTTGGTTTACCCTGCTA 59.647 52.381 0.00 0.00 34.29 3.49
7041 10423 1.873698 TGCTAAGTTTGACGTGGGTC 58.126 50.000 0.00 0.00 43.71 4.46
7212 10597 9.589111 TTTCAAGAATACACGTTAGTATATGCA 57.411 29.630 0.00 0.00 33.73 3.96
7314 10700 3.932822 TGTTTTAAGAGCGTCATAGGCA 58.067 40.909 0.00 0.00 0.00 4.75
7383 10769 0.253160 TGGAACTACAGAGGCCCCAT 60.253 55.000 0.00 0.00 0.00 4.00
7448 10834 1.995376 AGTTGGGCTGTTGGTAAAGG 58.005 50.000 0.00 0.00 0.00 3.11
7458 10844 4.559153 CTGTTGGTAAAGGGCTCATTTTG 58.441 43.478 0.00 0.00 0.00 2.44
7459 10845 3.964031 TGTTGGTAAAGGGCTCATTTTGT 59.036 39.130 0.00 0.00 0.00 2.83
7460 10846 5.141182 TGTTGGTAAAGGGCTCATTTTGTA 58.859 37.500 0.00 0.00 0.00 2.41
7461 10847 5.010213 TGTTGGTAAAGGGCTCATTTTGTAC 59.990 40.000 0.00 0.00 0.00 2.90
7462 10848 4.993028 TGGTAAAGGGCTCATTTTGTACT 58.007 39.130 0.00 0.00 0.00 2.73
7463 10849 5.007682 TGGTAAAGGGCTCATTTTGTACTC 58.992 41.667 0.00 0.00 0.00 2.59
7464 10850 4.398358 GGTAAAGGGCTCATTTTGTACTCC 59.602 45.833 0.00 0.00 0.00 3.85
7465 10851 2.808906 AGGGCTCATTTTGTACTCCC 57.191 50.000 0.00 0.00 0.00 4.30
7466 10852 2.279173 AGGGCTCATTTTGTACTCCCT 58.721 47.619 0.00 0.00 37.77 4.20
7467 10853 2.239907 AGGGCTCATTTTGTACTCCCTC 59.760 50.000 0.00 0.00 38.13 4.30
7468 10854 2.644676 GGCTCATTTTGTACTCCCTCC 58.355 52.381 0.00 0.00 0.00 4.30
7469 10855 2.280628 GCTCATTTTGTACTCCCTCCG 58.719 52.381 0.00 0.00 0.00 4.63
7470 10856 2.354805 GCTCATTTTGTACTCCCTCCGT 60.355 50.000 0.00 0.00 0.00 4.69
7471 10857 3.522553 CTCATTTTGTACTCCCTCCGTC 58.477 50.000 0.00 0.00 0.00 4.79
7472 10858 2.235402 TCATTTTGTACTCCCTCCGTCC 59.765 50.000 0.00 0.00 0.00 4.79
7473 10859 0.604578 TTTTGTACTCCCTCCGTCCG 59.395 55.000 0.00 0.00 0.00 4.79
7474 10860 0.251297 TTTGTACTCCCTCCGTCCGA 60.251 55.000 0.00 0.00 0.00 4.55
7475 10861 0.251297 TTGTACTCCCTCCGTCCGAA 60.251 55.000 0.00 0.00 0.00 4.30
7476 10862 0.251297 TGTACTCCCTCCGTCCGAAA 60.251 55.000 0.00 0.00 0.00 3.46
7477 10863 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
7478 10864 1.273327 GTACTCCCTCCGTCCGAAAAA 59.727 52.381 0.00 0.00 0.00 1.94
7479 10865 0.320697 ACTCCCTCCGTCCGAAAAAG 59.679 55.000 0.00 0.00 0.00 2.27
7480 10866 1.004200 TCCCTCCGTCCGAAAAAGC 60.004 57.895 0.00 0.00 0.00 3.51
7481 10867 1.003718 CCCTCCGTCCGAAAAAGCT 60.004 57.895 0.00 0.00 0.00 3.74
7482 10868 0.605589 CCCTCCGTCCGAAAAAGCTT 60.606 55.000 0.00 0.00 0.00 3.74
7483 10869 0.517316 CCTCCGTCCGAAAAAGCTTG 59.483 55.000 0.00 0.00 0.00 4.01
7484 10870 1.226746 CTCCGTCCGAAAAAGCTTGT 58.773 50.000 0.00 0.00 0.00 3.16
7485 10871 1.194772 CTCCGTCCGAAAAAGCTTGTC 59.805 52.381 0.00 0.00 0.00 3.18
7486 10872 0.237498 CCGTCCGAAAAAGCTTGTCC 59.763 55.000 0.00 0.00 0.00 4.02
7487 10873 0.237498 CGTCCGAAAAAGCTTGTCCC 59.763 55.000 0.00 0.00 0.00 4.46
7488 10874 1.605753 GTCCGAAAAAGCTTGTCCCT 58.394 50.000 0.00 0.00 0.00 4.20
7489 10875 1.535896 GTCCGAAAAAGCTTGTCCCTC 59.464 52.381 0.00 0.00 0.00 4.30
7490 10876 1.142060 TCCGAAAAAGCTTGTCCCTCA 59.858 47.619 0.00 0.00 0.00 3.86
7491 10877 1.953686 CCGAAAAAGCTTGTCCCTCAA 59.046 47.619 0.00 0.00 34.61 3.02
7492 10878 2.360801 CCGAAAAAGCTTGTCCCTCAAA 59.639 45.455 0.00 0.00 35.48 2.69
7493 10879 3.005791 CCGAAAAAGCTTGTCCCTCAAAT 59.994 43.478 0.00 0.00 35.48 2.32
7494 10880 3.983344 CGAAAAAGCTTGTCCCTCAAATG 59.017 43.478 0.00 0.00 35.48 2.32
7495 10881 4.309933 GAAAAAGCTTGTCCCTCAAATGG 58.690 43.478 0.00 0.00 35.48 3.16
7496 10882 2.978156 AAGCTTGTCCCTCAAATGGA 57.022 45.000 0.00 0.00 35.48 3.41
7497 10883 3.463048 AAGCTTGTCCCTCAAATGGAT 57.537 42.857 0.00 0.00 35.48 3.41
7498 10884 2.731572 AGCTTGTCCCTCAAATGGATG 58.268 47.619 0.00 0.00 35.48 3.51
7499 10885 2.042162 AGCTTGTCCCTCAAATGGATGT 59.958 45.455 0.00 0.00 35.48 3.06
7500 10886 3.266772 AGCTTGTCCCTCAAATGGATGTA 59.733 43.478 0.00 0.00 35.48 2.29
7501 10887 4.079558 AGCTTGTCCCTCAAATGGATGTAT 60.080 41.667 0.00 0.00 35.48 2.29
7502 10888 4.276926 GCTTGTCCCTCAAATGGATGTATC 59.723 45.833 0.00 0.00 35.48 2.24
7503 10889 5.688807 CTTGTCCCTCAAATGGATGTATCT 58.311 41.667 0.00 0.00 35.48 1.98
7504 10890 6.688922 GCTTGTCCCTCAAATGGATGTATCTA 60.689 42.308 0.00 0.00 35.48 1.98
7505 10891 6.425210 TGTCCCTCAAATGGATGTATCTAG 57.575 41.667 0.00 0.00 33.65 2.43
7506 10892 5.221722 TGTCCCTCAAATGGATGTATCTAGC 60.222 44.000 0.00 0.00 33.65 3.42
7507 10893 4.021104 TCCCTCAAATGGATGTATCTAGCG 60.021 45.833 0.00 0.00 0.00 4.26
7508 10894 3.681897 CCTCAAATGGATGTATCTAGCGC 59.318 47.826 0.00 0.00 0.00 5.92
7509 10895 3.664107 TCAAATGGATGTATCTAGCGCC 58.336 45.455 2.29 0.00 0.00 6.53
7510 10896 3.070878 TCAAATGGATGTATCTAGCGCCA 59.929 43.478 2.29 0.00 0.00 5.69
7511 10897 3.769739 AATGGATGTATCTAGCGCCAA 57.230 42.857 2.29 0.00 0.00 4.52
7512 10898 2.820059 TGGATGTATCTAGCGCCAAG 57.180 50.000 2.29 1.50 0.00 3.61
7513 10899 2.039418 TGGATGTATCTAGCGCCAAGT 58.961 47.619 2.29 0.00 0.00 3.16
7514 10900 2.434336 TGGATGTATCTAGCGCCAAGTT 59.566 45.455 2.29 0.00 0.00 2.66
7515 10901 3.639561 TGGATGTATCTAGCGCCAAGTTA 59.360 43.478 2.29 0.00 0.00 2.24
7516 10902 4.238514 GGATGTATCTAGCGCCAAGTTAG 58.761 47.826 2.29 0.00 35.31 2.34
7517 10903 4.262079 GGATGTATCTAGCGCCAAGTTAGT 60.262 45.833 2.29 0.00 35.48 2.24
7518 10904 4.041740 TGTATCTAGCGCCAAGTTAGTG 57.958 45.455 2.29 0.00 35.48 2.74
7519 10905 1.941325 ATCTAGCGCCAAGTTAGTGC 58.059 50.000 2.29 0.00 41.08 4.40
7523 10909 3.436001 GCGCCAAGTTAGTGCTAGA 57.564 52.632 0.00 0.00 37.75 2.43
7524 10910 1.941325 GCGCCAAGTTAGTGCTAGAT 58.059 50.000 0.00 0.00 37.75 1.98
7525 10911 3.093717 GCGCCAAGTTAGTGCTAGATA 57.906 47.619 0.00 0.00 37.75 1.98
7526 10912 2.795470 GCGCCAAGTTAGTGCTAGATAC 59.205 50.000 0.00 0.00 37.75 2.24
7527 10913 3.737047 GCGCCAAGTTAGTGCTAGATACA 60.737 47.826 0.00 0.00 37.75 2.29
7528 10914 4.621991 CGCCAAGTTAGTGCTAGATACAT 58.378 43.478 0.00 0.00 0.00 2.29
7529 10915 4.681942 CGCCAAGTTAGTGCTAGATACATC 59.318 45.833 0.00 0.00 0.00 3.06
7530 10916 4.991687 GCCAAGTTAGTGCTAGATACATCC 59.008 45.833 0.00 0.00 0.00 3.51
7531 10917 5.453339 GCCAAGTTAGTGCTAGATACATCCA 60.453 44.000 0.00 0.00 0.00 3.41
7532 10918 6.742644 GCCAAGTTAGTGCTAGATACATCCAT 60.743 42.308 0.00 0.00 0.00 3.41
7533 10919 7.220030 CCAAGTTAGTGCTAGATACATCCATT 58.780 38.462 0.00 0.00 0.00 3.16
7534 10920 7.716998 CCAAGTTAGTGCTAGATACATCCATTT 59.283 37.037 0.00 0.00 0.00 2.32
7535 10921 8.554528 CAAGTTAGTGCTAGATACATCCATTTG 58.445 37.037 0.00 0.00 0.00 2.32
7536 10922 8.023021 AGTTAGTGCTAGATACATCCATTTGA 57.977 34.615 0.00 0.00 0.00 2.69
7537 10923 8.147058 AGTTAGTGCTAGATACATCCATTTGAG 58.853 37.037 0.00 0.00 0.00 3.02
7538 10924 5.862845 AGTGCTAGATACATCCATTTGAGG 58.137 41.667 0.00 0.00 0.00 3.86
7539 10925 4.999950 GTGCTAGATACATCCATTTGAGGG 59.000 45.833 0.00 0.00 0.00 4.30
7540 10926 4.907269 TGCTAGATACATCCATTTGAGGGA 59.093 41.667 0.00 0.00 39.14 4.20
7541 10927 5.221722 TGCTAGATACATCCATTTGAGGGAC 60.222 44.000 0.00 0.00 37.23 4.46
7542 10928 5.221722 GCTAGATACATCCATTTGAGGGACA 60.222 44.000 0.00 0.00 37.23 4.02
7543 10929 5.715439 AGATACATCCATTTGAGGGACAA 57.285 39.130 0.00 0.00 37.23 3.18
7544 10930 5.688807 AGATACATCCATTTGAGGGACAAG 58.311 41.667 0.00 0.00 39.77 3.16
7545 10931 2.450476 ACATCCATTTGAGGGACAAGC 58.550 47.619 0.00 0.00 39.77 4.01
7546 10932 2.042162 ACATCCATTTGAGGGACAAGCT 59.958 45.455 0.00 0.00 39.77 3.74
7547 10933 2.978156 TCCATTTGAGGGACAAGCTT 57.022 45.000 0.00 0.00 39.77 3.74
7548 10934 2.517959 TCCATTTGAGGGACAAGCTTG 58.482 47.619 24.84 24.84 39.77 4.01
7549 10935 1.547372 CCATTTGAGGGACAAGCTTGG 59.453 52.381 29.18 12.28 39.77 3.61
7550 10936 1.547372 CATTTGAGGGACAAGCTTGGG 59.453 52.381 29.18 6.83 39.77 4.12
7551 10937 0.850100 TTTGAGGGACAAGCTTGGGA 59.150 50.000 29.18 4.51 39.77 4.37
7552 10938 0.110486 TTGAGGGACAAGCTTGGGAC 59.890 55.000 29.18 18.90 34.20 4.46
7553 10939 1.059584 TGAGGGACAAGCTTGGGACA 61.060 55.000 29.18 17.71 0.00 4.02
7554 10940 4.092026 TTGAGGGACAAGCTTGGGACAA 62.092 50.000 29.18 21.59 37.48 3.18
7555 10941 5.893518 TTGAGGGACAAGCTTGGGACAAG 62.894 52.174 29.18 3.71 37.48 3.16
7565 10951 2.727103 TGGGACAAGCTTTTTCCGG 58.273 52.632 14.98 0.00 31.92 5.14
7566 10952 0.183971 TGGGACAAGCTTTTTCCGGA 59.816 50.000 14.98 0.00 31.92 5.14
7567 10953 0.596577 GGGACAAGCTTTTTCCGGAC 59.403 55.000 1.83 0.00 0.00 4.79
7568 10954 0.237498 GGACAAGCTTTTTCCGGACG 59.763 55.000 1.83 0.00 0.00 4.79
7569 10955 0.237498 GACAAGCTTTTTCCGGACGG 59.763 55.000 1.83 3.96 0.00 4.79
7570 10956 0.179040 ACAAGCTTTTTCCGGACGGA 60.179 50.000 1.83 9.76 43.52 4.69
7571 10957 0.517316 CAAGCTTTTTCCGGACGGAG 59.483 55.000 13.64 2.86 46.06 4.63
7572 10958 0.605589 AAGCTTTTTCCGGACGGAGG 60.606 55.000 13.64 7.05 46.06 4.30
7573 10959 2.038837 GCTTTTTCCGGACGGAGGG 61.039 63.158 13.64 6.74 46.06 4.30
7574 10960 1.675219 CTTTTTCCGGACGGAGGGA 59.325 57.895 13.64 1.83 46.06 4.20
7734 11120 7.442969 ACAGGAAATTGTAAGTCGTTGATAACA 59.557 33.333 0.00 0.00 0.00 2.41
7744 11130 4.082679 AGTCGTTGATAACACCAGAGTCTC 60.083 45.833 0.00 0.00 0.00 3.36
7745 11131 4.079970 TCGTTGATAACACCAGAGTCTCT 58.920 43.478 0.00 0.00 0.00 3.10
7993 11379 2.472695 ATGGTGAACAGTACACGCAT 57.527 45.000 0.00 0.00 38.90 4.73
8011 11397 8.226543 ACACGCATTGTTCACTATTAAAAATG 57.773 30.769 0.00 0.00 33.09 2.32
8062 11456 7.984617 TCACCATAATGTATTTCATCGTCAGAA 59.015 33.333 0.00 0.00 35.48 3.02
8097 11491 7.067532 TGTAAAACACATCCATATGAACGTC 57.932 36.000 3.65 0.00 36.54 4.34
8415 11818 0.539051 CTGTGGCTCTACTGAAGGGG 59.461 60.000 0.00 0.00 0.00 4.79
8570 11973 0.770499 TTGTGGATCTGTTCCTGGCA 59.230 50.000 6.35 0.00 45.68 4.92
8644 12047 0.606401 GCCAGCTGCTTGTTACCTGA 60.606 55.000 8.66 0.00 36.87 3.86
8710 12113 4.221703 TCTTTTTGTGTTTGAAGCCAGGAA 59.778 37.500 0.00 0.00 0.00 3.36
8711 12114 3.518634 TTTGTGTTTGAAGCCAGGAAC 57.481 42.857 0.00 0.00 0.00 3.62
8759 12163 4.465660 ACAAATATGTACTGGCAAATGGCA 59.534 37.500 9.44 9.44 42.66 4.92
8941 12345 6.248569 ACCCATACTCGATGAGGTATTTTT 57.751 37.500 0.00 0.00 37.35 1.94
8964 12368 4.405116 TTTTTCATGCCTGTCTTTTGCT 57.595 36.364 0.00 0.00 0.00 3.91
8965 12369 3.374220 TTTCATGCCTGTCTTTTGCTG 57.626 42.857 0.00 0.00 0.00 4.41
8972 12376 1.202927 CCTGTCTTTTGCTGGAAGGGA 60.203 52.381 0.00 0.00 0.00 4.20
8973 12377 2.586425 CTGTCTTTTGCTGGAAGGGAA 58.414 47.619 0.00 0.00 0.00 3.97
8990 12394 6.554605 GGAAGGGAAATTCCAATATCCATGAA 59.445 38.462 14.68 0.00 46.77 2.57
8995 12399 8.212995 GGGAAATTCCAATATCCATGAACAATT 58.787 33.333 14.68 0.00 38.64 2.32
8996 12400 9.264719 GGAAATTCCAATATCCATGAACAATTC 57.735 33.333 7.23 0.00 36.28 2.17
9124 12529 2.358322 AAGACCCGAAGAAAGGCAAA 57.642 45.000 0.00 0.00 0.00 3.68
9161 12566 7.057264 GGGAAGATAGCTTTGGTTCTAGAAAT 58.943 38.462 6.78 0.00 33.61 2.17
9409 12850 2.286950 TGTTCTCTGCACATGTTTTCGC 60.287 45.455 0.00 0.00 0.00 4.70
9474 12919 1.196808 GCATGTGTTTCGTTCCGACAT 59.803 47.619 0.00 0.00 34.89 3.06
9628 13073 1.398692 ACTTTCAACGCCCACACAAT 58.601 45.000 0.00 0.00 0.00 2.71
9690 13167 0.604578 GTGCTACCGGTTACCACTCA 59.395 55.000 15.04 0.00 0.00 3.41
9784 13265 2.411583 ACTGGGGAGCATGACATGATA 58.588 47.619 19.76 0.00 0.00 2.15
9790 13271 3.776969 GGGAGCATGACATGATATCCCTA 59.223 47.826 29.16 0.00 41.80 3.53
9794 13275 4.224594 AGCATGACATGATATCCCTACCTG 59.775 45.833 19.76 0.00 0.00 4.00
9797 13278 6.126940 GCATGACATGATATCCCTACCTGTAT 60.127 42.308 19.76 0.00 0.00 2.29
9798 13279 7.495901 CATGACATGATATCCCTACCTGTATC 58.504 42.308 10.03 0.00 0.00 2.24
9799 13280 5.958380 TGACATGATATCCCTACCTGTATCC 59.042 44.000 0.00 0.00 0.00 2.59
9800 13281 6.172350 ACATGATATCCCTACCTGTATCCT 57.828 41.667 0.00 0.00 0.00 3.24
9867 13356 4.898829 TTGAAATCCCTGCATGTATTCG 57.101 40.909 0.00 0.00 0.00 3.34
9868 13357 3.884895 TGAAATCCCTGCATGTATTCGT 58.115 40.909 0.00 0.00 0.00 3.85
9869 13358 3.876914 TGAAATCCCTGCATGTATTCGTC 59.123 43.478 0.00 0.00 0.00 4.20
9870 13359 3.558931 AATCCCTGCATGTATTCGTCA 57.441 42.857 0.00 0.00 0.00 4.35
9871 13360 3.777106 ATCCCTGCATGTATTCGTCAT 57.223 42.857 0.00 0.00 0.00 3.06
9872 13361 3.111853 TCCCTGCATGTATTCGTCATC 57.888 47.619 0.00 0.00 0.00 2.92
9874 13363 2.224378 CCCTGCATGTATTCGTCATCCT 60.224 50.000 0.00 0.00 0.00 3.24
9875 13364 3.062763 CCTGCATGTATTCGTCATCCTC 58.937 50.000 0.00 0.00 0.00 3.71
9876 13365 3.062763 CTGCATGTATTCGTCATCCTCC 58.937 50.000 0.00 0.00 0.00 4.30
9877 13366 2.224281 TGCATGTATTCGTCATCCTCCC 60.224 50.000 0.00 0.00 0.00 4.30
9878 13367 2.677199 CATGTATTCGTCATCCTCCCG 58.323 52.381 0.00 0.00 0.00 5.14
9879 13368 2.061509 TGTATTCGTCATCCTCCCGA 57.938 50.000 0.00 0.00 0.00 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.519930 GAGGACGCCGTCTCCCTC 61.520 72.222 17.76 12.26 38.47 4.30
187 188 3.705289 TTGCTAGCTGGCAGCCGA 61.705 61.111 34.33 22.09 43.77 5.54
343 344 4.704833 GCGAGTTGCTGGAGGCCA 62.705 66.667 5.01 0.00 41.73 5.36
503 678 2.041824 AGGGGATGGAGATGGAGATG 57.958 55.000 0.00 0.00 0.00 2.90
599 774 3.606065 AACCGAACCTCGCGAGTCG 62.606 63.158 30.96 30.96 38.82 4.18
601 776 2.049433 CAACCGAACCTCGCGAGT 60.049 61.111 32.41 17.19 38.82 4.18
602 777 1.219522 AAACAACCGAACCTCGCGAG 61.220 55.000 29.06 29.06 38.82 5.03
616 791 9.810545 AAGATAAAGAAAACGGAAATGAAACAA 57.189 25.926 0.00 0.00 0.00 2.83
653 828 1.412343 CCAACCAAGAAAACACCCCTG 59.588 52.381 0.00 0.00 0.00 4.45
656 831 1.686587 CCTCCAACCAAGAAAACACCC 59.313 52.381 0.00 0.00 0.00 4.61
659 834 4.541705 TCATTCCTCCAACCAAGAAAACA 58.458 39.130 0.00 0.00 0.00 2.83
676 851 2.115343 AACGGAGGCCTTCTTCATTC 57.885 50.000 6.77 0.00 0.00 2.67
680 855 2.457080 CGAAACGGAGGCCTTCTTC 58.543 57.895 6.77 4.62 0.00 2.87
681 856 4.695560 CGAAACGGAGGCCTTCTT 57.304 55.556 6.77 0.00 0.00 2.52
781 3267 3.498661 GGAGAGAATGGTGTTTGGGACTT 60.499 47.826 0.00 0.00 0.00 3.01
783 3269 2.437413 GGAGAGAATGGTGTTTGGGAC 58.563 52.381 0.00 0.00 0.00 4.46
784 3270 1.354368 GGGAGAGAATGGTGTTTGGGA 59.646 52.381 0.00 0.00 0.00 4.37
785 3271 1.616994 GGGGAGAGAATGGTGTTTGGG 60.617 57.143 0.00 0.00 0.00 4.12
795 3281 0.399233 CGGGGAGAAGGGGAGAGAAT 60.399 60.000 0.00 0.00 0.00 2.40
846 3340 1.473434 CGGGGCTAAGAGCTTACTTGG 60.473 57.143 0.00 0.00 41.99 3.61
848 3342 0.178301 GCGGGGCTAAGAGCTTACTT 59.822 55.000 0.00 0.00 41.99 2.24
849 3343 1.687297 GGCGGGGCTAAGAGCTTACT 61.687 60.000 0.00 0.00 41.99 2.24
850 3344 1.227586 GGCGGGGCTAAGAGCTTAC 60.228 63.158 0.00 0.00 41.99 2.34
851 3345 2.792947 CGGCGGGGCTAAGAGCTTA 61.793 63.158 0.00 0.00 41.99 3.09
852 3346 4.162690 CGGCGGGGCTAAGAGCTT 62.163 66.667 0.00 0.00 41.99 3.74
874 3368 4.778143 AGCTTACTTGGGGCGGCG 62.778 66.667 0.51 0.51 0.00 6.46
875 3369 2.821679 AAGAGCTTACTTGGGGCGGC 62.822 60.000 0.00 0.00 0.00 6.53
876 3370 0.539986 TAAGAGCTTACTTGGGGCGG 59.460 55.000 0.00 0.00 0.00 6.13
877 3371 1.941325 CTAAGAGCTTACTTGGGGCG 58.059 55.000 0.00 0.00 0.00 6.13
878 3372 1.669604 GCTAAGAGCTTACTTGGGGC 58.330 55.000 0.00 0.00 38.45 5.80
879 3373 1.134068 GGGCTAAGAGCTTACTTGGGG 60.134 57.143 0.00 0.00 41.99 4.96
880 3374 1.134068 GGGGCTAAGAGCTTACTTGGG 60.134 57.143 0.00 0.00 41.99 4.12
881 3375 1.473434 CGGGGCTAAGAGCTTACTTGG 60.473 57.143 0.00 0.00 41.99 3.61
882 3376 1.941325 CGGGGCTAAGAGCTTACTTG 58.059 55.000 0.00 0.00 41.99 3.16
883 3377 0.178301 GCGGGGCTAAGAGCTTACTT 59.822 55.000 0.00 0.00 41.99 2.24
884 3378 1.687297 GGCGGGGCTAAGAGCTTACT 61.687 60.000 0.00 0.00 41.99 2.24
885 3379 1.227586 GGCGGGGCTAAGAGCTTAC 60.228 63.158 0.00 0.00 41.99 2.34
886 3380 1.382695 AGGCGGGGCTAAGAGCTTA 60.383 57.895 0.00 0.00 41.99 3.09
887 3381 2.689034 AGGCGGGGCTAAGAGCTT 60.689 61.111 0.00 0.00 41.99 3.74
888 3382 3.157949 GAGGCGGGGCTAAGAGCT 61.158 66.667 0.00 0.00 41.99 4.09
889 3383 4.243008 GGAGGCGGGGCTAAGAGC 62.243 72.222 0.00 0.00 41.46 4.09
890 3384 3.917760 CGGAGGCGGGGCTAAGAG 61.918 72.222 0.00 0.00 0.00 2.85
909 3403 4.778143 AGCTTACTTGGGGCGGCG 62.778 66.667 0.51 0.51 0.00 6.46
910 3404 2.821679 AAGAGCTTACTTGGGGCGGC 62.822 60.000 0.00 0.00 0.00 6.53
911 3405 0.539986 TAAGAGCTTACTTGGGGCGG 59.460 55.000 0.00 0.00 0.00 6.13
912 3406 1.941325 CTAAGAGCTTACTTGGGGCG 58.059 55.000 0.00 0.00 0.00 6.13
913 3407 1.669604 GCTAAGAGCTTACTTGGGGC 58.330 55.000 0.00 0.00 38.45 5.80
914 3408 1.134068 GGGCTAAGAGCTTACTTGGGG 60.134 57.143 0.00 0.00 41.99 4.96
915 3409 1.134068 GGGGCTAAGAGCTTACTTGGG 60.134 57.143 0.00 0.00 41.99 4.12
916 3410 1.473434 CGGGGCTAAGAGCTTACTTGG 60.473 57.143 0.00 0.00 41.99 3.61
917 3411 1.941325 CGGGGCTAAGAGCTTACTTG 58.059 55.000 0.00 0.00 41.99 3.16
918 3412 0.178301 GCGGGGCTAAGAGCTTACTT 59.822 55.000 0.00 0.00 41.99 2.24
919 3413 1.687297 GGCGGGGCTAAGAGCTTACT 61.687 60.000 0.00 0.00 41.99 2.24
920 3414 1.227586 GGCGGGGCTAAGAGCTTAC 60.228 63.158 0.00 0.00 41.99 2.34
921 3415 1.382695 AGGCGGGGCTAAGAGCTTA 60.383 57.895 0.00 0.00 41.99 3.09
922 3416 2.689034 AGGCGGGGCTAAGAGCTT 60.689 61.111 0.00 0.00 41.99 3.74
923 3417 3.157949 GAGGCGGGGCTAAGAGCT 61.158 66.667 0.00 0.00 41.99 4.09
924 3418 4.243008 GGAGGCGGGGCTAAGAGC 62.243 72.222 0.00 0.00 41.46 4.09
925 3419 3.917760 CGGAGGCGGGGCTAAGAG 61.918 72.222 0.00 0.00 0.00 2.85
937 3431 3.764466 ACTTCTCTGCGGCGGAGG 61.764 66.667 32.31 21.95 37.46 4.30
938 3432 2.507992 CACTTCTCTGCGGCGGAG 60.508 66.667 28.83 28.83 38.15 4.63
939 3433 2.989253 TCACTTCTCTGCGGCGGA 60.989 61.111 11.64 11.64 0.00 5.54
940 3434 2.507992 CTCACTTCTCTGCGGCGG 60.508 66.667 9.78 1.35 0.00 6.13
941 3435 2.507992 CCTCACTTCTCTGCGGCG 60.508 66.667 0.51 0.51 0.00 6.46
942 3436 1.446966 GACCTCACTTCTCTGCGGC 60.447 63.158 0.00 0.00 0.00 6.53
943 3437 0.605589 AAGACCTCACTTCTCTGCGG 59.394 55.000 0.00 0.00 0.00 5.69
944 3438 2.733858 GCTAAGACCTCACTTCTCTGCG 60.734 54.545 0.00 0.00 0.00 5.18
945 3439 2.418060 GGCTAAGACCTCACTTCTCTGC 60.418 54.545 0.00 0.00 0.00 4.26
983 3477 4.883759 TCCCATCTCTCCAGATACTTCAA 58.116 43.478 0.00 0.00 37.25 2.69
991 3485 2.503356 GCTTCTTTCCCATCTCTCCAGA 59.497 50.000 0.00 0.00 0.00 3.86
993 3487 2.238144 CTGCTTCTTTCCCATCTCTCCA 59.762 50.000 0.00 0.00 0.00 3.86
1005 3499 2.230660 CCCGGTTTCTTCTGCTTCTTT 58.769 47.619 0.00 0.00 0.00 2.52
1020 3514 3.945064 CTCCTTCCCCTTCCCCGGT 62.945 68.421 0.00 0.00 0.00 5.28
1196 3706 1.356270 CAGAACGCAACAAGCAGCA 59.644 52.632 0.00 0.00 46.13 4.41
1273 3788 3.737266 TGCAGCAACGTGTAGTACTAAAC 59.263 43.478 12.58 12.58 0.00 2.01
1281 3796 1.217001 TGAAGTGCAGCAACGTGTAG 58.783 50.000 0.00 0.00 0.00 2.74
1282 3797 1.798223 GATGAAGTGCAGCAACGTGTA 59.202 47.619 0.00 0.00 31.86 2.90
1283 3798 0.588252 GATGAAGTGCAGCAACGTGT 59.412 50.000 0.00 0.00 31.86 4.49
1284 3799 0.110056 GGATGAAGTGCAGCAACGTG 60.110 55.000 0.00 0.00 33.64 4.49
1285 3800 0.250467 AGGATGAAGTGCAGCAACGT 60.250 50.000 0.00 0.00 33.64 3.99
1294 3809 7.031975 GGAAATAAGCAAAAGAGGATGAAGTG 58.968 38.462 0.00 0.00 0.00 3.16
1304 3819 3.352648 CGAGGGGGAAATAAGCAAAAGA 58.647 45.455 0.00 0.00 0.00 2.52
1324 3839 0.798776 CAGTGAAGTAAAGCCCAGCG 59.201 55.000 0.00 0.00 0.00 5.18
1325 3840 0.523519 GCAGTGAAGTAAAGCCCAGC 59.476 55.000 0.00 0.00 0.00 4.85
1326 3841 1.808945 CTGCAGTGAAGTAAAGCCCAG 59.191 52.381 5.25 0.00 0.00 4.45
1339 3854 4.391216 CCTTCTGTATGTTCTTCTGCAGTG 59.609 45.833 14.67 8.33 0.00 3.66
1484 3999 5.591643 AACGTTACACAGCTTCAACTATG 57.408 39.130 0.00 0.00 0.00 2.23
1485 4000 7.900782 ATTAACGTTACACAGCTTCAACTAT 57.099 32.000 7.70 0.00 0.00 2.12
1486 4001 7.718272 AATTAACGTTACACAGCTTCAACTA 57.282 32.000 7.70 0.00 0.00 2.24
1487 4002 6.613755 AATTAACGTTACACAGCTTCAACT 57.386 33.333 7.70 0.00 0.00 3.16
1488 4003 7.130269 AGAAATTAACGTTACACAGCTTCAAC 58.870 34.615 7.70 0.00 0.00 3.18
1490 4005 6.854496 AGAAATTAACGTTACACAGCTTCA 57.146 33.333 7.70 0.00 0.00 3.02
1491 4006 7.425595 GCATAGAAATTAACGTTACACAGCTTC 59.574 37.037 7.70 5.10 0.00 3.86
1493 4008 6.594159 AGCATAGAAATTAACGTTACACAGCT 59.406 34.615 7.70 6.93 0.00 4.24
1494 4009 6.772078 AGCATAGAAATTAACGTTACACAGC 58.228 36.000 7.70 4.83 0.00 4.40
1504 4039 9.846248 ACAAGATTCACAAGCATAGAAATTAAC 57.154 29.630 0.00 0.00 0.00 2.01
1538 4073 5.499004 TCCAACTTCTAAGCACCTAACAT 57.501 39.130 0.00 0.00 0.00 2.71
1558 4098 7.907389 TCATATACAATGAGACTGGGTTATCC 58.093 38.462 0.00 0.00 0.00 2.59
1562 4102 5.130975 TGCTCATATACAATGAGACTGGGTT 59.869 40.000 17.04 0.00 46.25 4.11
1565 4105 5.699915 CCTTGCTCATATACAATGAGACTGG 59.300 44.000 17.04 10.96 46.25 4.00
1605 4147 7.539712 TCAACTAAAATTTCTCATAGCCTCG 57.460 36.000 0.00 0.00 0.00 4.63
1639 4181 7.924412 GCTCAATGGTGTAATGATCATCATTTT 59.076 33.333 18.11 2.76 44.03 1.82
1647 4189 6.148480 GGACATAGCTCAATGGTGTAATGATC 59.852 42.308 0.00 0.00 0.00 2.92
1655 4197 6.698008 TTATTTGGACATAGCTCAATGGTG 57.302 37.500 0.00 0.00 0.00 4.17
1658 4200 9.294030 GAACTTTTATTTGGACATAGCTCAATG 57.706 33.333 0.00 0.00 0.00 2.82
1782 4408 6.772360 TGCTTGGCTGAAAAATCATATACA 57.228 33.333 0.00 0.00 0.00 2.29
1791 4417 7.622893 AAAATTTACTTGCTTGGCTGAAAAA 57.377 28.000 0.00 0.00 0.00 1.94
1827 4453 4.298332 AGAATCACGTCAAATTTGGCAAC 58.702 39.130 21.85 10.44 31.86 4.17
1835 4461 7.066163 TGCATATGAGAAAGAATCACGTCAAAT 59.934 33.333 6.97 0.00 0.00 2.32
1842 4468 6.374565 AAGCTGCATATGAGAAAGAATCAC 57.625 37.500 6.97 0.00 0.00 3.06
1844 4470 6.484643 TGGTAAGCTGCATATGAGAAAGAATC 59.515 38.462 6.97 0.00 0.00 2.52
2004 4631 4.811969 ATGAAAGAGCATGGCAAAATCA 57.188 36.364 0.00 0.00 0.00 2.57
2063 4690 0.250901 ACAGGGAAGCGCAAAGACAT 60.251 50.000 11.47 0.00 0.00 3.06
2068 4695 2.843401 TTACTACAGGGAAGCGCAAA 57.157 45.000 11.47 0.00 0.00 3.68
2092 4719 6.045955 TCAAGGAAAAACATTAAGCAACCAC 58.954 36.000 0.00 0.00 0.00 4.16
2158 4785 7.605691 AGAAGCATATAGACAATATTCAGCACC 59.394 37.037 0.00 0.00 0.00 5.01
2180 4807 4.520492 ACCATAAACAAAGGTCTGCAGAAG 59.480 41.667 20.19 8.77 0.00 2.85
2340 4967 7.338703 ACCTTTACTCGTAGAATGTACTCATGA 59.661 37.037 0.00 0.00 34.09 3.07
2347 4974 5.909621 AGCACCTTTACTCGTAGAATGTA 57.090 39.130 0.00 0.00 34.09 2.29
2391 5018 8.981647 CCACCTGAAACATCAATAAAAAGAAAG 58.018 33.333 0.00 0.00 0.00 2.62
2646 5278 9.760660 GACATTTCAACACATACTTTCATAGAC 57.239 33.333 0.00 0.00 0.00 2.59
2710 5342 8.512966 AAAGAGCCTTCTATTCCTTGATTTAC 57.487 34.615 0.00 0.00 31.96 2.01
2744 5376 4.155826 CACATCCAAATAAAAGACAGGCGA 59.844 41.667 0.00 0.00 0.00 5.54
2808 5528 9.773328 TGATGTTAAATCAGAAAGAAATAAGCG 57.227 29.630 0.00 0.00 0.00 4.68
2813 5533 7.675619 ACCCCTGATGTTAAATCAGAAAGAAAT 59.324 33.333 13.62 0.00 46.25 2.17
2900 5620 3.068024 CCTGCAGTAGAAAACAAGCCAAA 59.932 43.478 13.81 0.00 32.26 3.28
3012 5732 5.767816 AGTGGTTTCAACATAAAGACACC 57.232 39.130 0.00 0.00 35.63 4.16
3047 5893 4.376225 AAGATTAAGGAAAACGGGACCA 57.624 40.909 0.00 0.00 0.00 4.02
3053 5899 7.873739 AATGCAGAAAAGATTAAGGAAAACG 57.126 32.000 0.00 0.00 0.00 3.60
3156 6002 5.681639 AGGCACTAGGTTGTCCAAATATAC 58.318 41.667 0.00 0.00 36.02 1.47
3157 6003 5.968676 AGGCACTAGGTTGTCCAAATATA 57.031 39.130 0.00 0.00 36.02 0.86
3391 6245 6.952773 AATAACTTCACCACAAGCTAAACA 57.047 33.333 0.00 0.00 0.00 2.83
3475 6330 7.299246 ACTACTCAACTGGTACATAACTTGT 57.701 36.000 0.00 0.00 42.62 3.16
3476 6331 8.521176 ACTACTACTCAACTGGTACATAACTTG 58.479 37.037 0.00 0.00 38.20 3.16
3477 6332 8.521176 CACTACTACTCAACTGGTACATAACTT 58.479 37.037 0.00 0.00 38.20 2.66
3478 6333 7.668886 ACACTACTACTCAACTGGTACATAACT 59.331 37.037 0.00 0.00 38.20 2.24
3479 6334 7.824672 ACACTACTACTCAACTGGTACATAAC 58.175 38.462 0.00 0.00 38.20 1.89
3480 6335 9.519191 TTACACTACTACTCAACTGGTACATAA 57.481 33.333 0.00 0.00 38.20 1.90
3481 6336 8.950210 GTTACACTACTACTCAACTGGTACATA 58.050 37.037 0.00 0.00 38.20 2.29
3482 6337 7.449395 TGTTACACTACTACTCAACTGGTACAT 59.551 37.037 0.00 0.00 38.20 2.29
3483 6338 6.772233 TGTTACACTACTACTCAACTGGTACA 59.228 38.462 0.00 0.00 0.00 2.90
3484 6339 7.040823 ACTGTTACACTACTACTCAACTGGTAC 60.041 40.741 0.00 0.00 0.00 3.34
3485 6340 7.000472 ACTGTTACACTACTACTCAACTGGTA 59.000 38.462 0.00 0.00 0.00 3.25
3486 6341 5.832060 ACTGTTACACTACTACTCAACTGGT 59.168 40.000 0.00 0.00 0.00 4.00
3487 6342 6.328641 ACTGTTACACTACTACTCAACTGG 57.671 41.667 0.00 0.00 0.00 4.00
3492 6347 9.730705 ACTGTAATACTGTTACACTACTACTCA 57.269 33.333 0.00 0.00 32.16 3.41
3498 6353 9.850628 TGATCAACTGTAATACTGTTACACTAC 57.149 33.333 13.89 5.64 38.03 2.73
3500 6355 9.587772 GATGATCAACTGTAATACTGTTACACT 57.412 33.333 13.89 1.94 38.03 3.55
3501 6356 8.532341 CGATGATCAACTGTAATACTGTTACAC 58.468 37.037 13.89 9.32 38.03 2.90
3502 6357 8.463607 TCGATGATCAACTGTAATACTGTTACA 58.536 33.333 13.89 13.82 38.03 2.41
3503 6358 8.851960 TCGATGATCAACTGTAATACTGTTAC 57.148 34.615 13.89 9.85 38.03 2.50
3504 6359 9.297586 GTTCGATGATCAACTGTAATACTGTTA 57.702 33.333 13.89 1.58 38.03 2.41
3505 6360 7.817478 TGTTCGATGATCAACTGTAATACTGTT 59.183 33.333 9.43 9.43 40.22 3.16
3506 6361 7.320399 TGTTCGATGATCAACTGTAATACTGT 58.680 34.615 0.00 0.00 0.00 3.55
3507 6362 7.755582 TGTTCGATGATCAACTGTAATACTG 57.244 36.000 0.00 0.00 0.00 2.74
3508 6363 8.771920 TTTGTTCGATGATCAACTGTAATACT 57.228 30.769 0.00 0.00 0.00 2.12
3509 6364 8.869897 TCTTTGTTCGATGATCAACTGTAATAC 58.130 33.333 0.00 0.00 0.00 1.89
3510 6365 8.996024 TCTTTGTTCGATGATCAACTGTAATA 57.004 30.769 0.00 0.00 0.00 0.98
3511 6366 7.905604 TCTTTGTTCGATGATCAACTGTAAT 57.094 32.000 0.00 0.00 0.00 1.89
3512 6367 7.722795 TTCTTTGTTCGATGATCAACTGTAA 57.277 32.000 0.00 0.00 0.00 2.41
3513 6368 7.225734 TGTTTCTTTGTTCGATGATCAACTGTA 59.774 33.333 0.00 0.00 0.00 2.74
3514 6369 6.038161 TGTTTCTTTGTTCGATGATCAACTGT 59.962 34.615 0.00 0.00 0.00 3.55
3515 6370 6.358030 GTGTTTCTTTGTTCGATGATCAACTG 59.642 38.462 0.00 0.00 0.00 3.16
3516 6371 6.038161 TGTGTTTCTTTGTTCGATGATCAACT 59.962 34.615 0.00 0.00 0.00 3.16
3517 6372 6.198687 TGTGTTTCTTTGTTCGATGATCAAC 58.801 36.000 0.00 0.00 0.00 3.18
3518 6373 6.370433 TGTGTTTCTTTGTTCGATGATCAA 57.630 33.333 0.00 0.00 0.00 2.57
3519 6374 6.370433 TTGTGTTTCTTTGTTCGATGATCA 57.630 33.333 0.00 0.00 0.00 2.92
3520 6375 7.678194 TTTTGTGTTTCTTTGTTCGATGATC 57.322 32.000 0.00 0.00 0.00 2.92
3521 6376 7.973388 TCTTTTTGTGTTTCTTTGTTCGATGAT 59.027 29.630 0.00 0.00 0.00 2.45
3522 6377 7.309177 TCTTTTTGTGTTTCTTTGTTCGATGA 58.691 30.769 0.00 0.00 0.00 2.92
3523 6378 7.504922 TCTTTTTGTGTTTCTTTGTTCGATG 57.495 32.000 0.00 0.00 0.00 3.84
3524 6379 7.812669 AGTTCTTTTTGTGTTTCTTTGTTCGAT 59.187 29.630 0.00 0.00 0.00 3.59
3525 6380 7.142680 AGTTCTTTTTGTGTTTCTTTGTTCGA 58.857 30.769 0.00 0.00 0.00 3.71
3526 6381 7.333288 AGTTCTTTTTGTGTTTCTTTGTTCG 57.667 32.000 0.00 0.00 0.00 3.95
3527 6382 7.114388 ACGAGTTCTTTTTGTGTTTCTTTGTTC 59.886 33.333 0.00 0.00 0.00 3.18
3528 6383 6.921307 ACGAGTTCTTTTTGTGTTTCTTTGTT 59.079 30.769 0.00 0.00 0.00 2.83
3529 6384 6.362283 CACGAGTTCTTTTTGTGTTTCTTTGT 59.638 34.615 0.00 0.00 0.00 2.83
3530 6385 6.183359 CCACGAGTTCTTTTTGTGTTTCTTTG 60.183 38.462 0.00 0.00 0.00 2.77
3531 6386 5.861787 CCACGAGTTCTTTTTGTGTTTCTTT 59.138 36.000 0.00 0.00 0.00 2.52
3532 6387 5.399013 CCACGAGTTCTTTTTGTGTTTCTT 58.601 37.500 0.00 0.00 0.00 2.52
3533 6388 4.674362 GCCACGAGTTCTTTTTGTGTTTCT 60.674 41.667 0.00 0.00 0.00 2.52
3534 6389 3.546271 GCCACGAGTTCTTTTTGTGTTTC 59.454 43.478 0.00 0.00 0.00 2.78
3535 6390 3.507786 GCCACGAGTTCTTTTTGTGTTT 58.492 40.909 0.00 0.00 0.00 2.83
3536 6391 2.477189 CGCCACGAGTTCTTTTTGTGTT 60.477 45.455 0.00 0.00 0.00 3.32
3552 6469 3.226346 TCACAACATACTCTACGCCAC 57.774 47.619 0.00 0.00 0.00 5.01
3762 6679 5.413213 TCCCACTAAAACACCAACATTATCG 59.587 40.000 0.00 0.00 0.00 2.92
4000 6922 6.594788 ACATCAGTTGCCACATAAGAAAAT 57.405 33.333 0.00 0.00 0.00 1.82
4029 6951 7.223260 TCTTTCTTATGACTCCTTGTTACGA 57.777 36.000 0.00 0.00 0.00 3.43
4205 7128 4.826733 TCAGCATAACAGGTCACATTTTGT 59.173 37.500 0.00 0.00 0.00 2.83
4505 7458 1.004440 GCGGGGATATGCAGGTCTC 60.004 63.158 0.00 0.00 0.00 3.36
4521 7474 2.624316 ACATTGCAAGACATTCAGCG 57.376 45.000 4.94 0.00 0.00 5.18
4563 7516 7.512992 CATCCCAGTCTTCTTAACCTATCAAT 58.487 38.462 0.00 0.00 0.00 2.57
4747 7700 7.309133 CCAAAAAGATGAAACATAGTGCACCTA 60.309 37.037 14.63 5.85 0.00 3.08
4749 7702 5.634859 CCAAAAAGATGAAACATAGTGCACC 59.365 40.000 14.63 0.00 0.00 5.01
4834 7787 4.098914 TCACAGCATATGGAAATACCCC 57.901 45.455 4.56 0.00 38.00 4.95
5132 8092 1.291132 GACAGACGAATAAGCAGGGC 58.709 55.000 0.00 0.00 0.00 5.19
5144 8106 2.742053 CCACCAACCTTAATGACAGACG 59.258 50.000 0.00 0.00 0.00 4.18
5234 8196 3.942130 AAATAGGCAAACAAGCAGGAC 57.058 42.857 0.00 0.00 35.83 3.85
5330 8679 6.586344 ACATATATATGGTATGCCTGACTGC 58.414 40.000 23.44 0.00 38.00 4.40
5349 8705 3.834231 AGTTGGCCAAGAGCAAAACATAT 59.166 39.130 21.21 0.00 46.50 1.78
5350 8706 3.230134 AGTTGGCCAAGAGCAAAACATA 58.770 40.909 21.21 0.00 46.50 2.29
5351 8707 2.041701 AGTTGGCCAAGAGCAAAACAT 58.958 42.857 21.21 0.00 46.50 2.71
5352 8708 1.484038 AGTTGGCCAAGAGCAAAACA 58.516 45.000 21.21 0.00 46.50 2.83
5475 8831 7.885399 GGCACAGAGGGAATACTATATGATTTT 59.115 37.037 0.00 0.00 0.00 1.82
5480 8836 5.745312 TGGCACAGAGGGAATACTATATG 57.255 43.478 0.00 0.00 0.00 1.78
5499 8855 4.957759 AAACCACGACAAGTATTATGGC 57.042 40.909 0.00 0.00 0.00 4.40
5517 8873 9.550811 CCATAATACTTCTCGTGGTTTTAAAAC 57.449 33.333 20.58 20.58 38.17 2.43
5518 8874 9.504708 TCCATAATACTTCTCGTGGTTTTAAAA 57.495 29.630 0.00 0.00 0.00 1.52
5519 8875 9.504708 TTCCATAATACTTCTCGTGGTTTTAAA 57.495 29.630 0.00 0.00 0.00 1.52
5520 8876 8.938906 GTTCCATAATACTTCTCGTGGTTTTAA 58.061 33.333 0.00 0.00 0.00 1.52
5521 8877 7.276218 CGTTCCATAATACTTCTCGTGGTTTTA 59.724 37.037 0.00 0.00 0.00 1.52
5525 8881 4.441079 CCGTTCCATAATACTTCTCGTGGT 60.441 45.833 0.00 0.00 0.00 4.16
5526 8882 4.049186 CCGTTCCATAATACTTCTCGTGG 58.951 47.826 0.00 0.00 0.00 4.94
5527 8883 4.049186 CCCGTTCCATAATACTTCTCGTG 58.951 47.826 0.00 0.00 0.00 4.35
5528 8884 3.069158 CCCCGTTCCATAATACTTCTCGT 59.931 47.826 0.00 0.00 0.00 4.18
5529 8885 3.554337 CCCCCGTTCCATAATACTTCTCG 60.554 52.174 0.00 0.00 0.00 4.04
5549 8930 1.763545 GTGATCCCAAGAGTACTCCCC 59.236 57.143 19.38 0.00 0.00 4.81
5559 8940 7.922811 GCTTGGATAATTAAAAGTGATCCCAAG 59.077 37.037 0.00 0.00 36.08 3.61
5560 8941 7.398618 TGCTTGGATAATTAAAAGTGATCCCAA 59.601 33.333 0.00 0.00 36.08 4.12
5562 8943 7.346751 TGCTTGGATAATTAAAAGTGATCCC 57.653 36.000 0.00 0.00 36.08 3.85
5565 8946 9.918630 GCATATGCTTGGATAATTAAAAGTGAT 57.081 29.630 20.64 0.00 38.21 3.06
5584 8965 6.657836 ATTCTTGAAAAGCAAAGCATATGC 57.342 33.333 20.36 20.36 45.70 3.14
5585 8966 7.955324 CACAATTCTTGAAAAGCAAAGCATATG 59.045 33.333 0.00 0.00 45.70 1.78
5586 8967 7.360607 GCACAATTCTTGAAAAGCAAAGCATAT 60.361 33.333 0.00 0.00 45.70 1.78
5587 8968 6.073657 GCACAATTCTTGAAAAGCAAAGCATA 60.074 34.615 0.00 0.00 45.70 3.14
5588 8969 5.277634 GCACAATTCTTGAAAAGCAAAGCAT 60.278 36.000 0.00 0.00 45.70 3.79
5589 8970 4.034279 GCACAATTCTTGAAAAGCAAAGCA 59.966 37.500 0.00 0.00 45.70 3.91
5590 8971 4.034279 TGCACAATTCTTGAAAAGCAAAGC 59.966 37.500 0.00 0.00 45.70 3.51
5591 8972 5.292589 ACTGCACAATTCTTGAAAAGCAAAG 59.707 36.000 0.00 0.00 45.70 2.77
5592 8973 5.063691 CACTGCACAATTCTTGAAAAGCAAA 59.936 36.000 0.00 0.00 45.70 3.68
5593 8974 4.567558 CACTGCACAATTCTTGAAAAGCAA 59.432 37.500 0.00 0.00 45.70 3.91
5594 8975 4.114073 CACTGCACAATTCTTGAAAAGCA 58.886 39.130 0.00 0.00 45.70 3.91
5595 8976 4.207841 GTCACTGCACAATTCTTGAAAAGC 59.792 41.667 0.00 0.00 45.70 3.51
5597 8978 5.105797 ACTGTCACTGCACAATTCTTGAAAA 60.106 36.000 0.00 0.00 0.00 2.29
5598 8979 4.398988 ACTGTCACTGCACAATTCTTGAAA 59.601 37.500 0.00 0.00 0.00 2.69
5599 8980 3.947196 ACTGTCACTGCACAATTCTTGAA 59.053 39.130 0.00 0.00 0.00 2.69
5600 8981 3.544684 ACTGTCACTGCACAATTCTTGA 58.455 40.909 0.00 0.00 0.00 3.02
5601 8982 3.562973 AGACTGTCACTGCACAATTCTTG 59.437 43.478 10.88 0.00 0.00 3.02
5602 8983 3.813443 AGACTGTCACTGCACAATTCTT 58.187 40.909 10.88 0.00 0.00 2.52
5603 8984 3.482156 AGACTGTCACTGCACAATTCT 57.518 42.857 10.88 0.00 0.00 2.40
5604 8985 4.511454 TGTTAGACTGTCACTGCACAATTC 59.489 41.667 10.88 0.00 0.00 2.17
5605 8986 4.273480 GTGTTAGACTGTCACTGCACAATT 59.727 41.667 10.88 0.00 0.00 2.32
5606 8987 3.809832 GTGTTAGACTGTCACTGCACAAT 59.190 43.478 10.88 0.00 0.00 2.71
5607 8988 3.118775 AGTGTTAGACTGTCACTGCACAA 60.119 43.478 10.88 0.00 40.29 3.33
5608 8989 2.430694 AGTGTTAGACTGTCACTGCACA 59.569 45.455 10.88 2.47 40.29 4.57
5609 8990 3.099267 AGTGTTAGACTGTCACTGCAC 57.901 47.619 10.88 12.29 40.29 4.57
5619 9000 3.967987 AGAAGTGGAACCAGTGTTAGACT 59.032 43.478 1.70 0.00 37.80 3.24
5620 9001 4.338379 AGAAGTGGAACCAGTGTTAGAC 57.662 45.455 1.70 0.00 37.80 2.59
5621 9002 5.010719 CAGTAGAAGTGGAACCAGTGTTAGA 59.989 44.000 1.70 0.00 37.80 2.10
5622 9003 5.230942 CAGTAGAAGTGGAACCAGTGTTAG 58.769 45.833 1.70 0.00 37.80 2.34
5623 9004 4.039973 CCAGTAGAAGTGGAACCAGTGTTA 59.960 45.833 1.70 0.00 41.28 2.41
5624 9005 3.181454 CCAGTAGAAGTGGAACCAGTGTT 60.181 47.826 1.70 0.00 41.28 3.32
5625 9006 2.368875 CCAGTAGAAGTGGAACCAGTGT 59.631 50.000 1.70 0.00 41.28 3.55
5626 9007 2.872038 GCCAGTAGAAGTGGAACCAGTG 60.872 54.545 4.94 0.00 41.28 3.66
5627 9008 1.348036 GCCAGTAGAAGTGGAACCAGT 59.652 52.381 4.94 0.00 41.28 4.00
5628 9009 1.625818 AGCCAGTAGAAGTGGAACCAG 59.374 52.381 4.94 0.00 41.28 4.00
5629 9010 1.729586 AGCCAGTAGAAGTGGAACCA 58.270 50.000 4.94 0.00 41.28 3.67
5630 9011 2.861147 AAGCCAGTAGAAGTGGAACC 57.139 50.000 4.94 0.00 41.28 3.62
5631 9012 4.246458 CTGTAAGCCAGTAGAAGTGGAAC 58.754 47.826 4.94 0.83 41.28 3.62
5632 9013 4.537135 CTGTAAGCCAGTAGAAGTGGAA 57.463 45.455 4.94 0.00 41.28 3.53
5918 9299 2.662596 CTGCTTGCGTAGGGTCCA 59.337 61.111 0.00 0.00 0.00 4.02
5919 9300 2.125106 CCTGCTTGCGTAGGGTCC 60.125 66.667 0.00 0.00 39.15 4.46
6006 9388 7.959651 CACAAAATTAGCTGTCTATCTCACAAC 59.040 37.037 0.00 0.00 0.00 3.32
6273 9655 6.817641 CAGATTGAACATCAGTAGCTTCTTCT 59.182 38.462 0.00 0.00 0.00 2.85
6718 10100 6.381801 ACAACTAGCAGATAATTTGTTGCAC 58.618 36.000 0.00 0.00 38.97 4.57
6719 10101 6.573664 ACAACTAGCAGATAATTTGTTGCA 57.426 33.333 0.00 0.00 38.97 4.08
6763 10145 6.823689 GGAAAGCAAAGGTGAGTTCTGATATA 59.176 38.462 0.00 0.00 0.00 0.86
6789 10171 3.374220 TTCAGATGCCTGCACAAAAAG 57.626 42.857 0.00 0.00 40.20 2.27
6985 10367 2.427453 CGAGTATGACTGTTAGCAGGGT 59.573 50.000 11.56 0.00 46.62 4.34
6993 10375 9.924650 ATTTTAAGAAGTACGAGTATGACTGTT 57.075 29.630 0.00 0.00 0.00 3.16
7041 10423 6.364706 GGCTAGAATCAGATTAATCAGTCACG 59.635 42.308 17.56 3.66 0.00 4.35
7212 10597 9.007901 GTCTATCATGCAGAATTTTAGCCTAAT 57.992 33.333 0.00 0.00 0.00 1.73
7255 10640 1.748493 GTGGAAAGTGTTGCTGGAACA 59.252 47.619 10.84 10.84 42.55 3.18
7262 10647 2.297701 TCCTCAAGTGGAAAGTGTTGC 58.702 47.619 0.00 0.00 32.39 4.17
7314 10700 6.855763 TGTTGGATCTATGGAAAAATGCTT 57.144 33.333 0.00 0.00 0.00 3.91
7383 10769 9.562408 TGACAACATATACCAACAAACTAAGAA 57.438 29.630 0.00 0.00 0.00 2.52
7448 10834 2.644676 GGAGGGAGTACAAAATGAGCC 58.355 52.381 0.00 0.00 0.00 4.70
7458 10844 0.890683 TTTTCGGACGGAGGGAGTAC 59.109 55.000 0.00 0.00 0.00 2.73
7459 10845 1.547372 CTTTTTCGGACGGAGGGAGTA 59.453 52.381 0.00 0.00 0.00 2.59
7460 10846 0.320697 CTTTTTCGGACGGAGGGAGT 59.679 55.000 0.00 0.00 0.00 3.85
7461 10847 1.019805 GCTTTTTCGGACGGAGGGAG 61.020 60.000 0.00 0.00 0.00 4.30
7462 10848 1.004200 GCTTTTTCGGACGGAGGGA 60.004 57.895 0.00 0.00 0.00 4.20
7463 10849 0.605589 AAGCTTTTTCGGACGGAGGG 60.606 55.000 0.00 0.00 0.00 4.30
7464 10850 0.517316 CAAGCTTTTTCGGACGGAGG 59.483 55.000 0.00 0.00 0.00 4.30
7465 10851 1.194772 GACAAGCTTTTTCGGACGGAG 59.805 52.381 0.00 0.00 0.00 4.63
7466 10852 1.223187 GACAAGCTTTTTCGGACGGA 58.777 50.000 0.00 0.00 0.00 4.69
7467 10853 0.237498 GGACAAGCTTTTTCGGACGG 59.763 55.000 0.00 0.00 0.00 4.79
7468 10854 0.237498 GGGACAAGCTTTTTCGGACG 59.763 55.000 0.00 0.00 0.00 4.79
7469 10855 1.535896 GAGGGACAAGCTTTTTCGGAC 59.464 52.381 0.00 0.00 0.00 4.79
7470 10856 1.142060 TGAGGGACAAGCTTTTTCGGA 59.858 47.619 0.00 0.00 0.00 4.55
7471 10857 1.604604 TGAGGGACAAGCTTTTTCGG 58.395 50.000 0.00 0.00 0.00 4.30
7472 10858 3.708563 TTTGAGGGACAAGCTTTTTCG 57.291 42.857 0.00 0.00 39.77 3.46
7473 10859 4.039124 TCCATTTGAGGGACAAGCTTTTTC 59.961 41.667 0.00 0.00 39.77 2.29
7474 10860 3.966665 TCCATTTGAGGGACAAGCTTTTT 59.033 39.130 0.00 0.00 39.77 1.94
7475 10861 3.575805 TCCATTTGAGGGACAAGCTTTT 58.424 40.909 0.00 0.00 39.77 2.27
7476 10862 3.243359 TCCATTTGAGGGACAAGCTTT 57.757 42.857 0.00 0.00 39.77 3.51
7477 10863 2.978156 TCCATTTGAGGGACAAGCTT 57.022 45.000 0.00 0.00 39.77 3.74
7478 10864 2.042162 ACATCCATTTGAGGGACAAGCT 59.958 45.455 0.00 0.00 39.77 3.74
7479 10865 2.450476 ACATCCATTTGAGGGACAAGC 58.550 47.619 0.00 0.00 39.77 4.01
7480 10866 5.688807 AGATACATCCATTTGAGGGACAAG 58.311 41.667 0.00 0.00 39.77 3.16
7481 10867 5.715439 AGATACATCCATTTGAGGGACAA 57.285 39.130 0.00 0.00 37.23 3.18
7482 10868 5.221722 GCTAGATACATCCATTTGAGGGACA 60.222 44.000 0.00 0.00 37.23 4.02
7483 10869 5.241662 GCTAGATACATCCATTTGAGGGAC 58.758 45.833 0.00 0.00 37.23 4.46
7484 10870 4.021104 CGCTAGATACATCCATTTGAGGGA 60.021 45.833 0.00 0.00 39.14 4.20
7485 10871 4.248859 CGCTAGATACATCCATTTGAGGG 58.751 47.826 0.00 0.00 0.00 4.30
7486 10872 3.681897 GCGCTAGATACATCCATTTGAGG 59.318 47.826 0.00 0.00 0.00 3.86
7487 10873 3.681897 GGCGCTAGATACATCCATTTGAG 59.318 47.826 7.64 0.00 0.00 3.02
7488 10874 3.070878 TGGCGCTAGATACATCCATTTGA 59.929 43.478 7.64 0.00 0.00 2.69
7489 10875 3.402110 TGGCGCTAGATACATCCATTTG 58.598 45.455 7.64 0.00 0.00 2.32
7490 10876 3.769739 TGGCGCTAGATACATCCATTT 57.230 42.857 7.64 0.00 0.00 2.32
7491 10877 3.071602 ACTTGGCGCTAGATACATCCATT 59.928 43.478 7.64 0.00 0.00 3.16
7492 10878 2.634940 ACTTGGCGCTAGATACATCCAT 59.365 45.455 7.64 0.00 0.00 3.41
7493 10879 2.039418 ACTTGGCGCTAGATACATCCA 58.961 47.619 7.64 0.00 0.00 3.41
7494 10880 2.821991 ACTTGGCGCTAGATACATCC 57.178 50.000 7.64 0.00 0.00 3.51
7495 10881 4.681942 CACTAACTTGGCGCTAGATACATC 59.318 45.833 7.64 0.00 0.00 3.06
7496 10882 4.621991 CACTAACTTGGCGCTAGATACAT 58.378 43.478 7.64 0.00 0.00 2.29
7497 10883 3.737047 GCACTAACTTGGCGCTAGATACA 60.737 47.826 7.64 0.00 0.00 2.29
7498 10884 2.795470 GCACTAACTTGGCGCTAGATAC 59.205 50.000 7.64 0.00 0.00 2.24
7499 10885 2.693591 AGCACTAACTTGGCGCTAGATA 59.306 45.455 7.64 3.72 0.00 1.98
7500 10886 1.482593 AGCACTAACTTGGCGCTAGAT 59.517 47.619 7.64 2.60 0.00 1.98
7501 10887 0.895530 AGCACTAACTTGGCGCTAGA 59.104 50.000 7.64 0.00 0.00 2.43
7502 10888 2.464865 CTAGCACTAACTTGGCGCTAG 58.535 52.381 7.64 8.02 44.29 3.42
7503 10889 2.097036 TCTAGCACTAACTTGGCGCTA 58.903 47.619 7.64 0.00 34.18 4.26
7504 10890 0.895530 TCTAGCACTAACTTGGCGCT 59.104 50.000 7.64 0.00 36.72 5.92
7505 10891 1.941325 ATCTAGCACTAACTTGGCGC 58.059 50.000 0.00 0.00 0.00 6.53
7506 10892 4.041740 TGTATCTAGCACTAACTTGGCG 57.958 45.455 0.00 0.00 0.00 5.69
7507 10893 4.991687 GGATGTATCTAGCACTAACTTGGC 59.008 45.833 0.00 0.00 0.00 4.52
7508 10894 6.161855 TGGATGTATCTAGCACTAACTTGG 57.838 41.667 0.00 0.00 0.00 3.61
7509 10895 8.554528 CAAATGGATGTATCTAGCACTAACTTG 58.445 37.037 0.00 0.00 0.00 3.16
7510 10896 8.486210 TCAAATGGATGTATCTAGCACTAACTT 58.514 33.333 0.00 0.00 0.00 2.66
7511 10897 8.023021 TCAAATGGATGTATCTAGCACTAACT 57.977 34.615 0.00 0.00 0.00 2.24
7512 10898 7.386299 CCTCAAATGGATGTATCTAGCACTAAC 59.614 40.741 0.00 0.00 0.00 2.34
7513 10899 7.445121 CCTCAAATGGATGTATCTAGCACTAA 58.555 38.462 0.00 0.00 0.00 2.24
7514 10900 6.014242 CCCTCAAATGGATGTATCTAGCACTA 60.014 42.308 0.00 0.00 0.00 2.74
7515 10901 5.221803 CCCTCAAATGGATGTATCTAGCACT 60.222 44.000 0.00 0.00 0.00 4.40
7516 10902 4.999950 CCCTCAAATGGATGTATCTAGCAC 59.000 45.833 0.00 0.00 0.00 4.40
7517 10903 4.907269 TCCCTCAAATGGATGTATCTAGCA 59.093 41.667 0.00 0.00 0.00 3.49
7518 10904 5.221722 TGTCCCTCAAATGGATGTATCTAGC 60.222 44.000 0.00 0.00 33.65 3.42
7519 10905 6.425210 TGTCCCTCAAATGGATGTATCTAG 57.575 41.667 0.00 0.00 33.65 2.43
7520 10906 6.688922 GCTTGTCCCTCAAATGGATGTATCTA 60.689 42.308 0.00 0.00 35.48 1.98
7521 10907 5.688807 CTTGTCCCTCAAATGGATGTATCT 58.311 41.667 0.00 0.00 35.48 1.98
7522 10908 4.276926 GCTTGTCCCTCAAATGGATGTATC 59.723 45.833 0.00 0.00 35.48 2.24
7523 10909 4.079558 AGCTTGTCCCTCAAATGGATGTAT 60.080 41.667 0.00 0.00 35.48 2.29
7524 10910 3.266772 AGCTTGTCCCTCAAATGGATGTA 59.733 43.478 0.00 0.00 35.48 2.29
7525 10911 2.042162 AGCTTGTCCCTCAAATGGATGT 59.958 45.455 0.00 0.00 35.48 3.06
7526 10912 2.731572 AGCTTGTCCCTCAAATGGATG 58.268 47.619 0.00 0.00 35.48 3.51
7527 10913 3.094572 CAAGCTTGTCCCTCAAATGGAT 58.905 45.455 18.65 0.00 35.48 3.41
7528 10914 2.517959 CAAGCTTGTCCCTCAAATGGA 58.482 47.619 18.65 0.00 35.48 3.41
7529 10915 1.547372 CCAAGCTTGTCCCTCAAATGG 59.453 52.381 24.35 1.81 35.48 3.16
7530 10916 1.547372 CCCAAGCTTGTCCCTCAAATG 59.453 52.381 24.35 5.47 35.48 2.32
7531 10917 1.428912 TCCCAAGCTTGTCCCTCAAAT 59.571 47.619 24.35 0.00 35.48 2.32
7532 10918 0.850100 TCCCAAGCTTGTCCCTCAAA 59.150 50.000 24.35 0.00 35.48 2.69
7533 10919 0.110486 GTCCCAAGCTTGTCCCTCAA 59.890 55.000 24.35 0.00 34.61 3.02
7534 10920 1.059584 TGTCCCAAGCTTGTCCCTCA 61.060 55.000 24.35 12.85 0.00 3.86
7535 10921 0.110486 TTGTCCCAAGCTTGTCCCTC 59.890 55.000 24.35 10.65 0.00 4.30
7536 10922 0.111253 CTTGTCCCAAGCTTGTCCCT 59.889 55.000 24.35 0.00 0.00 4.20
7537 10923 1.527433 GCTTGTCCCAAGCTTGTCCC 61.527 60.000 24.35 11.81 40.01 4.46
7538 10924 1.959848 GCTTGTCCCAAGCTTGTCC 59.040 57.895 24.35 12.15 40.01 4.02
7544 10930 1.602920 CGGAAAAAGCTTGTCCCAAGC 60.603 52.381 18.69 18.69 43.31 4.01
7545 10931 1.000274 CCGGAAAAAGCTTGTCCCAAG 60.000 52.381 19.11 8.93 0.00 3.61
7546 10932 1.036707 CCGGAAAAAGCTTGTCCCAA 58.963 50.000 19.11 0.00 0.00 4.12
7547 10933 0.183971 TCCGGAAAAAGCTTGTCCCA 59.816 50.000 19.11 7.46 0.00 4.37
7548 10934 0.596577 GTCCGGAAAAAGCTTGTCCC 59.403 55.000 19.11 2.83 0.00 4.46
7549 10935 0.237498 CGTCCGGAAAAAGCTTGTCC 59.763 55.000 5.23 16.30 0.00 4.02
7550 10936 0.237498 CCGTCCGGAAAAAGCTTGTC 59.763 55.000 5.23 0.10 37.50 3.18
7551 10937 0.179040 TCCGTCCGGAAAAAGCTTGT 60.179 50.000 5.23 0.00 42.05 3.16
7552 10938 0.517316 CTCCGTCCGGAAAAAGCTTG 59.483 55.000 5.23 0.00 44.66 4.01
7553 10939 0.605589 CCTCCGTCCGGAAAAAGCTT 60.606 55.000 5.23 0.00 44.66 3.74
7554 10940 1.003718 CCTCCGTCCGGAAAAAGCT 60.004 57.895 5.23 0.00 44.66 3.74
7555 10941 2.038837 CCCTCCGTCCGGAAAAAGC 61.039 63.158 5.23 0.00 44.66 3.51
7556 10942 0.391263 CTCCCTCCGTCCGGAAAAAG 60.391 60.000 5.23 3.18 44.66 2.27
7557 10943 1.123246 ACTCCCTCCGTCCGGAAAAA 61.123 55.000 5.23 0.00 44.66 1.94
7558 10944 0.251742 TACTCCCTCCGTCCGGAAAA 60.252 55.000 5.23 0.00 44.66 2.29
7559 10945 0.032813 ATACTCCCTCCGTCCGGAAA 60.033 55.000 5.23 0.00 44.66 3.13
7560 10946 0.032813 AATACTCCCTCCGTCCGGAA 60.033 55.000 5.23 0.00 44.66 4.30
7561 10947 0.754217 CAATACTCCCTCCGTCCGGA 60.754 60.000 0.00 0.00 42.90 5.14
7562 10948 0.754217 TCAATACTCCCTCCGTCCGG 60.754 60.000 0.00 0.00 0.00 5.14
7563 10949 0.384669 GTCAATACTCCCTCCGTCCG 59.615 60.000 0.00 0.00 0.00 4.79
7564 10950 1.777941 AGTCAATACTCCCTCCGTCC 58.222 55.000 0.00 0.00 0.00 4.79
7565 10951 4.796618 GCAATAGTCAATACTCCCTCCGTC 60.797 50.000 0.00 0.00 37.15 4.79
7566 10952 3.069729 GCAATAGTCAATACTCCCTCCGT 59.930 47.826 0.00 0.00 37.15 4.69
7567 10953 3.069586 TGCAATAGTCAATACTCCCTCCG 59.930 47.826 0.00 0.00 37.15 4.63
7568 10954 4.101741 AGTGCAATAGTCAATACTCCCTCC 59.898 45.833 0.00 0.00 37.15 4.30
7569 10955 5.163405 TGAGTGCAATAGTCAATACTCCCTC 60.163 44.000 0.00 0.00 35.82 4.30
7570 10956 4.716784 TGAGTGCAATAGTCAATACTCCCT 59.283 41.667 0.00 0.00 35.82 4.20
7571 10957 5.023533 TGAGTGCAATAGTCAATACTCCC 57.976 43.478 0.00 0.00 35.82 4.30
7572 10958 5.053145 CCTGAGTGCAATAGTCAATACTCC 58.947 45.833 0.00 0.00 38.25 3.85
7573 10959 5.053145 CCCTGAGTGCAATAGTCAATACTC 58.947 45.833 0.00 0.00 38.25 2.59
7574 10960 4.471386 ACCCTGAGTGCAATAGTCAATACT 59.529 41.667 0.00 0.00 38.25 2.12
7767 11153 8.708742 GTCCTCCATTTAGCATTTTTGTAAAAC 58.291 33.333 0.00 0.00 0.00 2.43
7771 11157 5.941058 TCGTCCTCCATTTAGCATTTTTGTA 59.059 36.000 0.00 0.00 0.00 2.41
7824 11210 9.820725 TGAAACTTCAGAATGTGATTTTGAATT 57.179 25.926 0.00 0.00 40.93 2.17
7825 11211 9.820725 TTGAAACTTCAGAATGTGATTTTGAAT 57.179 25.926 0.00 0.00 40.93 2.57
7867 11253 3.937814 ACATCCGTATGAACATGTGTGT 58.062 40.909 0.00 0.00 37.02 3.72
7993 11379 9.755804 TCATGCAACATTTTTAATAGTGAACAA 57.244 25.926 0.00 0.00 0.00 2.83
8164 11563 0.537188 GAAGGACGAGCTCCATGGAA 59.463 55.000 17.00 0.00 42.46 3.53
8216 11615 3.975168 AACCATGCGTACCTACTTCTT 57.025 42.857 0.00 0.00 0.00 2.52
8217 11616 4.021916 ACTAACCATGCGTACCTACTTCT 58.978 43.478 0.00 0.00 0.00 2.85
8218 11617 4.357996 GACTAACCATGCGTACCTACTTC 58.642 47.826 0.00 0.00 0.00 3.01
8415 11818 2.158841 TCTGCGCAATTTCTTACGTTCC 59.841 45.455 13.05 0.00 0.00 3.62
8570 11973 1.494721 ACTTCAGACACCACACCCATT 59.505 47.619 0.00 0.00 0.00 3.16
8644 12047 5.796424 ATGATTTGGTTTTCAGTCTGCTT 57.204 34.783 0.00 0.00 0.00 3.91
8710 12113 6.945435 TCTCTTGTAGAAATCTCTCAGTGAGT 59.055 38.462 19.53 0.00 43.13 3.41
8711 12114 7.389803 TCTCTTGTAGAAATCTCTCAGTGAG 57.610 40.000 14.36 14.36 43.96 3.51
8759 12163 0.038159 GTTGAGTGTGCTCGTAGGCT 60.038 55.000 0.00 0.00 44.48 4.58
8882 12286 4.997905 TCGAGTTTCAGCAAGATCAAAG 57.002 40.909 0.00 0.00 0.00 2.77
8946 12350 1.614903 CCAGCAAAAGACAGGCATGAA 59.385 47.619 4.84 0.00 0.00 2.57
8947 12351 1.202915 TCCAGCAAAAGACAGGCATGA 60.203 47.619 4.84 0.00 0.00 3.07
8948 12352 1.250328 TCCAGCAAAAGACAGGCATG 58.750 50.000 0.00 0.00 0.00 4.06
8949 12353 1.891150 CTTCCAGCAAAAGACAGGCAT 59.109 47.619 0.00 0.00 0.00 4.40
8950 12354 1.321474 CTTCCAGCAAAAGACAGGCA 58.679 50.000 0.00 0.00 0.00 4.75
8951 12355 0.600057 CCTTCCAGCAAAAGACAGGC 59.400 55.000 0.00 0.00 0.00 4.85
8952 12356 1.202927 TCCCTTCCAGCAAAAGACAGG 60.203 52.381 0.00 0.00 0.00 4.00
8953 12357 2.276732 TCCCTTCCAGCAAAAGACAG 57.723 50.000 0.00 0.00 0.00 3.51
8954 12358 2.746279 TTCCCTTCCAGCAAAAGACA 57.254 45.000 0.00 0.00 0.00 3.41
8957 12361 3.930336 GGAATTTCCCTTCCAGCAAAAG 58.070 45.455 3.89 0.00 43.56 2.27
8965 12369 6.077322 TCATGGATATTGGAATTTCCCTTCC 58.923 40.000 12.90 12.72 44.23 3.46
9001 12406 8.464404 CAGGATGAGTTGACACATAATTTCATT 58.536 33.333 0.00 0.00 39.69 2.57
9007 12412 4.637534 GCACAGGATGAGTTGACACATAAT 59.362 41.667 0.00 0.00 39.69 1.28
9012 12417 0.792640 CGCACAGGATGAGTTGACAC 59.207 55.000 0.00 0.00 39.69 3.67
9024 12429 0.731514 CAGCTGAAAATGCGCACAGG 60.732 55.000 22.53 7.50 35.28 4.00
9124 12529 1.608717 ATCTTCCCGCGCTCTTCTGT 61.609 55.000 5.56 0.00 0.00 3.41
9161 12566 1.000896 GGAGCAAAGCTAAGCCCCA 60.001 57.895 6.06 0.00 39.88 4.96
9250 12685 3.316588 GGTCTCACTCTTCTGATCGCATA 59.683 47.826 0.00 0.00 0.00 3.14
9251 12686 2.100584 GGTCTCACTCTTCTGATCGCAT 59.899 50.000 0.00 0.00 0.00 4.73
9252 12687 1.474478 GGTCTCACTCTTCTGATCGCA 59.526 52.381 0.00 0.00 0.00 5.10
9253 12688 1.202359 GGGTCTCACTCTTCTGATCGC 60.202 57.143 0.00 0.00 0.00 4.58
9254 12689 2.374184 AGGGTCTCACTCTTCTGATCG 58.626 52.381 0.00 0.00 0.00 3.69
9255 12690 3.766591 TCAAGGGTCTCACTCTTCTGATC 59.233 47.826 0.00 0.00 36.63 2.92
9256 12691 3.784178 TCAAGGGTCTCACTCTTCTGAT 58.216 45.455 0.00 0.00 36.63 2.90
9257 12692 3.244887 TCAAGGGTCTCACTCTTCTGA 57.755 47.619 0.00 0.00 36.63 3.27
9259 12694 3.831911 CTCTTCAAGGGTCTCACTCTTCT 59.168 47.826 0.00 0.00 36.63 2.85
9389 12830 2.286950 TGCGAAAACATGTGCAGAGAAC 60.287 45.455 0.00 0.00 32.73 3.01
9409 12850 5.106948 CCAGTACATAATCGCCAAGCTATTG 60.107 44.000 0.00 0.00 36.09 1.90
9492 12937 0.378257 AATTACGCGGCATGCTCTTG 59.622 50.000 18.92 7.87 43.27 3.02
9654 13131 6.975197 CGGTAGCACATTATCCATGTATCTAG 59.025 42.308 0.00 0.00 45.06 2.43
9794 13275 6.146837 GTGATCATCAGCACATTGTAGGATAC 59.853 42.308 0.00 0.00 37.24 2.24
9797 13278 4.162888 AGTGATCATCAGCACATTGTAGGA 59.837 41.667 0.00 0.00 37.48 2.94
9798 13279 4.449131 AGTGATCATCAGCACATTGTAGG 58.551 43.478 0.00 0.00 37.48 3.18
9799 13280 5.816258 AGAAGTGATCATCAGCACATTGTAG 59.184 40.000 0.00 0.00 37.48 2.74
9800 13281 5.583457 CAGAAGTGATCATCAGCACATTGTA 59.417 40.000 0.00 0.00 37.48 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.