Multiple sequence alignment - TraesCS2D01G342200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G342200 chr2D 100.000 4978 0 0 1 4978 437902388 437897411 0.000000e+00 9193.0
1 TraesCS2D01G342200 chr2D 88.404 871 82 12 786 1642 437874456 437873591 0.000000e+00 1031.0
2 TraesCS2D01G342200 chr2D 82.059 340 55 4 3717 4051 437871829 437871491 8.160000e-73 285.0
3 TraesCS2D01G342200 chr2D 92.405 79 6 0 3167 3245 437872588 437872510 4.070000e-21 113.0
4 TraesCS2D01G342200 chr2D 95.455 66 2 1 1586 1650 437900338 437900273 2.450000e-18 104.0
5 TraesCS2D01G342200 chr2D 95.455 66 2 1 2051 2116 437900803 437900739 2.450000e-18 104.0
6 TraesCS2D01G342200 chr2A 93.165 1668 52 27 1 1646 550872120 550873747 0.000000e+00 2392.0
7 TraesCS2D01G342200 chr2A 91.993 1074 50 10 2998 4060 550874695 550875743 0.000000e+00 1474.0
8 TraesCS2D01G342200 chr2A 88.889 855 74 12 802 1642 550884849 550885696 0.000000e+00 1033.0
9 TraesCS2D01G342200 chr2A 83.952 673 56 23 2051 2705 550873687 550874325 9.220000e-167 597.0
10 TraesCS2D01G342200 chr2A 87.595 395 24 11 1661 2055 550874001 550874370 7.650000e-118 435.0
11 TraesCS2D01G342200 chr2A 89.118 340 27 8 4075 4408 550875726 550876061 9.970000e-112 414.0
12 TraesCS2D01G342200 chr2A 89.506 324 15 11 2705 3013 550874360 550874679 4.670000e-105 392.0
13 TraesCS2D01G342200 chr2A 81.646 316 53 3 3711 4022 550887231 550887545 1.780000e-64 257.0
14 TraesCS2D01G342200 chr2B 93.537 882 42 6 766 1645 514344044 514343176 0.000000e+00 1299.0
15 TraesCS2D01G342200 chr2B 87.234 846 80 12 804 1642 514322613 514321789 0.000000e+00 939.0
16 TraesCS2D01G342200 chr2B 90.950 663 39 7 2051 2705 514343235 514342586 0.000000e+00 872.0
17 TraesCS2D01G342200 chr2B 89.550 555 43 11 3522 4067 514341697 514341149 0.000000e+00 689.0
18 TraesCS2D01G342200 chr2B 87.140 451 31 14 79 520 514345064 514344632 2.080000e-133 486.0
19 TraesCS2D01G342200 chr2B 94.314 299 15 2 3028 3326 514342161 514341865 1.630000e-124 457.0
20 TraesCS2D01G342200 chr2B 87.313 402 35 10 1661 2055 514342933 514342541 3.540000e-121 446.0
21 TraesCS2D01G342200 chr2B 89.565 345 28 2 4078 4414 514341168 514340824 9.900000e-117 431.0
22 TraesCS2D01G342200 chr2B 89.769 303 18 8 2705 3006 514342551 514342261 4.700000e-100 375.0
23 TraesCS2D01G342200 chr2B 85.405 185 16 9 519 699 514344601 514344424 1.100000e-41 182.0
24 TraesCS2D01G342200 chr2B 90.441 136 8 2 3333 3468 514341823 514341693 1.840000e-39 174.0
25 TraesCS2D01G342200 chr2B 89.691 97 4 3 1 95 514345168 514345076 8.750000e-23 119.0
26 TraesCS2D01G342200 chr3D 88.605 588 44 14 4408 4978 418108975 418109556 0.000000e+00 693.0
27 TraesCS2D01G342200 chr3D 88.750 560 47 11 4415 4965 352358810 352358258 0.000000e+00 671.0
28 TraesCS2D01G342200 chr5D 88.562 577 53 6 4413 4978 203705619 203706193 0.000000e+00 688.0
29 TraesCS2D01G342200 chr5D 88.482 573 47 14 4415 4978 312078167 312077605 0.000000e+00 675.0
30 TraesCS2D01G342200 chr5D 87.805 574 49 12 4415 4978 216662656 216663218 0.000000e+00 652.0
31 TraesCS2D01G342200 chr6D 88.752 569 50 6 4418 4978 161455646 161455084 0.000000e+00 684.0
32 TraesCS2D01G342200 chr6D 83.333 624 102 2 1016 1638 270057149 270056527 4.320000e-160 575.0
33 TraesCS2D01G342200 chr5B 88.556 568 51 8 4415 4975 482961059 482960499 0.000000e+00 676.0
34 TraesCS2D01G342200 chr6A 88.028 568 55 6 4417 4978 55370221 55369661 0.000000e+00 660.0
35 TraesCS2D01G342200 chr4D 87.958 573 52 10 4415 4978 422997829 422997265 0.000000e+00 660.0
36 TraesCS2D01G342200 chr6B 84.135 624 97 2 1016 1638 422655547 422654925 1.980000e-168 603.0
37 TraesCS2D01G342200 chr7D 80.645 124 22 2 1136 1258 181846213 181846091 1.480000e-15 95.3
38 TraesCS2D01G342200 chr7A 80.000 130 24 2 1130 1258 190014766 190014894 1.480000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G342200 chr2D 437897411 437902388 4977 True 3133.666667 9193 96.970000 1 4978 3 chr2D.!!$R2 4977
1 TraesCS2D01G342200 chr2D 437871491 437874456 2965 True 476.333333 1031 87.622667 786 4051 3 chr2D.!!$R1 3265
2 TraesCS2D01G342200 chr2A 550872120 550876061 3941 False 950.666667 2392 89.221500 1 4408 6 chr2A.!!$F1 4407
3 TraesCS2D01G342200 chr2A 550884849 550887545 2696 False 645.000000 1033 85.267500 802 4022 2 chr2A.!!$F2 3220
4 TraesCS2D01G342200 chr2B 514321789 514322613 824 True 939.000000 939 87.234000 804 1642 1 chr2B.!!$R1 838
5 TraesCS2D01G342200 chr2B 514340824 514345168 4344 True 502.727273 1299 89.788636 1 4414 11 chr2B.!!$R2 4413
6 TraesCS2D01G342200 chr3D 418108975 418109556 581 False 693.000000 693 88.605000 4408 4978 1 chr3D.!!$F1 570
7 TraesCS2D01G342200 chr3D 352358258 352358810 552 True 671.000000 671 88.750000 4415 4965 1 chr3D.!!$R1 550
8 TraesCS2D01G342200 chr5D 203705619 203706193 574 False 688.000000 688 88.562000 4413 4978 1 chr5D.!!$F1 565
9 TraesCS2D01G342200 chr5D 312077605 312078167 562 True 675.000000 675 88.482000 4415 4978 1 chr5D.!!$R1 563
10 TraesCS2D01G342200 chr5D 216662656 216663218 562 False 652.000000 652 87.805000 4415 4978 1 chr5D.!!$F2 563
11 TraesCS2D01G342200 chr6D 161455084 161455646 562 True 684.000000 684 88.752000 4418 4978 1 chr6D.!!$R1 560
12 TraesCS2D01G342200 chr6D 270056527 270057149 622 True 575.000000 575 83.333000 1016 1638 1 chr6D.!!$R2 622
13 TraesCS2D01G342200 chr5B 482960499 482961059 560 True 676.000000 676 88.556000 4415 4975 1 chr5B.!!$R1 560
14 TraesCS2D01G342200 chr6A 55369661 55370221 560 True 660.000000 660 88.028000 4417 4978 1 chr6A.!!$R1 561
15 TraesCS2D01G342200 chr4D 422997265 422997829 564 True 660.000000 660 87.958000 4415 4978 1 chr4D.!!$R1 563
16 TraesCS2D01G342200 chr6B 422654925 422655547 622 True 603.000000 603 84.135000 1016 1638 1 chr6B.!!$R1 622

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
565 638 0.604578 GTGCTACCGGTTACCACTCA 59.395 55.0 15.04 0.00 0.00 3.41 F
1658 2072 0.108186 CTCGGCCTGTCAGTTGCATA 60.108 55.0 0.00 0.00 0.00 3.14 F
1833 2247 0.034337 TGTCAAGCCCACGGTTAGAC 59.966 55.0 0.00 0.00 32.71 2.59 F
1847 2261 0.035152 TTAGACTCGGAGGCCACGTA 60.035 55.0 17.69 5.96 0.00 3.57 F
3280 4533 0.037326 TCTTGTAGAGGGCTGTTGCG 60.037 55.0 0.00 0.00 40.82 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1814 2228 0.034337 GTCTAACCGTGGGCTTGACA 59.966 55.0 0.00 0.0 0.00 3.58 R
3398 4706 1.246737 GGAGGGCCAGCAAAGACTTG 61.247 60.0 6.18 0.0 35.49 3.16 R
3664 5055 5.127845 ACGGATGATCTGACACTGATAAGTT 59.872 40.0 8.51 0.0 0.00 2.66 R
3680 5071 6.118170 AGATTCATTCAGTTTGACGGATGAT 58.882 36.0 0.00 0.0 0.00 2.45 R
4934 6389 0.032217 TCCCCCGTCCGGTAATAAGT 60.032 55.0 0.00 0.0 0.00 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 7.057264 GGGAAGATAGCTTTGGTTCTAGAAAT 58.943 38.462 6.78 0.00 33.61 2.17
284 321 2.286950 TGTTCTCTGCACATGTTTTCGC 60.287 45.455 0.00 0.00 0.00 4.70
349 390 1.196808 GCATGTGTTTCGTTCCGACAT 59.803 47.619 0.00 0.00 34.89 3.06
503 544 1.398692 ACTTTCAACGCCCACACAAT 58.601 45.000 0.00 0.00 0.00 2.71
565 638 0.604578 GTGCTACCGGTTACCACTCA 59.395 55.000 15.04 0.00 0.00 3.41
659 736 2.411583 ACTGGGGAGCATGACATGATA 58.588 47.619 19.76 0.00 0.00 2.15
665 742 3.776969 GGGAGCATGACATGATATCCCTA 59.223 47.826 29.16 0.00 41.80 3.53
669 746 4.224594 AGCATGACATGATATCCCTACCTG 59.775 45.833 19.76 0.00 0.00 4.00
672 749 6.126940 GCATGACATGATATCCCTACCTGTAT 60.127 42.308 19.76 0.00 0.00 2.29
673 750 7.495901 CATGACATGATATCCCTACCTGTATC 58.504 42.308 10.03 0.00 0.00 2.24
674 751 5.958380 TGACATGATATCCCTACCTGTATCC 59.042 44.000 0.00 0.00 0.00 2.59
675 752 6.172350 ACATGATATCCCTACCTGTATCCT 57.828 41.667 0.00 0.00 0.00 3.24
742 827 4.898829 TTGAAATCCCTGCATGTATTCG 57.101 40.909 0.00 0.00 0.00 3.34
743 828 3.884895 TGAAATCCCTGCATGTATTCGT 58.115 40.909 0.00 0.00 0.00 3.85
744 829 3.876914 TGAAATCCCTGCATGTATTCGTC 59.123 43.478 0.00 0.00 0.00 4.20
745 830 3.558931 AATCCCTGCATGTATTCGTCA 57.441 42.857 0.00 0.00 0.00 4.35
746 831 3.777106 ATCCCTGCATGTATTCGTCAT 57.223 42.857 0.00 0.00 0.00 3.06
747 832 3.111853 TCCCTGCATGTATTCGTCATC 57.888 47.619 0.00 0.00 0.00 2.92
749 834 2.224378 CCCTGCATGTATTCGTCATCCT 60.224 50.000 0.00 0.00 0.00 3.24
750 835 3.062763 CCTGCATGTATTCGTCATCCTC 58.937 50.000 0.00 0.00 0.00 3.71
950 1364 4.351054 CACCTCCCCACTGCCCAC 62.351 72.222 0.00 0.00 0.00 4.61
963 1377 2.280552 GCCCACCAGTCTCACCGTA 61.281 63.158 0.00 0.00 0.00 4.02
1416 1830 2.568090 GTCAACAATGCGGGGCAG 59.432 61.111 0.00 0.00 43.65 4.85
1648 2062 3.289525 GAGTACTGCTCGGCCTGT 58.710 61.111 0.00 0.00 34.13 4.00
1649 2063 1.139947 GAGTACTGCTCGGCCTGTC 59.860 63.158 0.00 0.00 34.13 3.51
1650 2064 1.595993 GAGTACTGCTCGGCCTGTCA 61.596 60.000 0.00 0.00 34.13 3.58
1651 2065 1.153745 GTACTGCTCGGCCTGTCAG 60.154 63.158 0.00 7.32 0.00 3.51
1653 2067 1.185618 TACTGCTCGGCCTGTCAGTT 61.186 55.000 20.55 9.32 40.01 3.16
1654 2068 2.031012 TGCTCGGCCTGTCAGTTG 59.969 61.111 0.00 0.00 0.00 3.16
1655 2069 3.426568 GCTCGGCCTGTCAGTTGC 61.427 66.667 0.00 0.00 0.00 4.17
1656 2070 2.031012 CTCGGCCTGTCAGTTGCA 59.969 61.111 0.00 0.00 0.00 4.08
1657 2071 1.376424 CTCGGCCTGTCAGTTGCAT 60.376 57.895 0.00 0.00 0.00 3.96
1658 2072 0.108186 CTCGGCCTGTCAGTTGCATA 60.108 55.000 0.00 0.00 0.00 3.14
1659 2073 0.323302 TCGGCCTGTCAGTTGCATAA 59.677 50.000 0.00 0.00 0.00 1.90
1660 2074 1.065491 TCGGCCTGTCAGTTGCATAAT 60.065 47.619 0.00 0.00 0.00 1.28
1661 2075 1.745087 CGGCCTGTCAGTTGCATAATT 59.255 47.619 0.00 0.00 0.00 1.40
1662 2076 2.223340 CGGCCTGTCAGTTGCATAATTC 60.223 50.000 0.00 0.00 0.00 2.17
1663 2077 2.754552 GGCCTGTCAGTTGCATAATTCA 59.245 45.455 0.00 0.00 0.00 2.57
1664 2078 3.382546 GGCCTGTCAGTTGCATAATTCAT 59.617 43.478 0.00 0.00 0.00 2.57
1665 2079 4.498682 GGCCTGTCAGTTGCATAATTCATC 60.499 45.833 0.00 0.00 0.00 2.92
1666 2080 4.337555 GCCTGTCAGTTGCATAATTCATCT 59.662 41.667 0.00 0.00 0.00 2.90
1667 2081 5.528690 GCCTGTCAGTTGCATAATTCATCTA 59.471 40.000 0.00 0.00 0.00 1.98
1668 2082 6.038603 GCCTGTCAGTTGCATAATTCATCTAA 59.961 38.462 0.00 0.00 0.00 2.10
1669 2083 7.255381 GCCTGTCAGTTGCATAATTCATCTAAT 60.255 37.037 0.00 0.00 0.00 1.73
1670 2084 8.627403 CCTGTCAGTTGCATAATTCATCTAATT 58.373 33.333 0.00 0.00 40.87 1.40
1672 2086 9.791820 TGTCAGTTGCATAATTCATCTAATTTG 57.208 29.630 0.00 0.00 38.71 2.32
1673 2087 8.749499 GTCAGTTGCATAATTCATCTAATTTGC 58.251 33.333 0.00 0.00 39.46 3.68
1674 2088 8.689061 TCAGTTGCATAATTCATCTAATTTGCT 58.311 29.630 0.00 0.00 39.58 3.91
1675 2089 9.309516 CAGTTGCATAATTCATCTAATTTGCTT 57.690 29.630 0.00 0.00 39.58 3.91
1676 2090 9.309516 AGTTGCATAATTCATCTAATTTGCTTG 57.690 29.630 0.00 0.00 39.58 4.01
1677 2091 9.304731 GTTGCATAATTCATCTAATTTGCTTGA 57.695 29.630 0.00 0.00 39.58 3.02
1678 2092 8.861033 TGCATAATTCATCTAATTTGCTTGAC 57.139 30.769 13.50 0.00 39.58 3.18
1679 2093 8.468399 TGCATAATTCATCTAATTTGCTTGACA 58.532 29.630 13.50 0.00 39.58 3.58
1680 2094 9.472361 GCATAATTCATCTAATTTGCTTGACAT 57.528 29.630 0.00 0.00 38.71 3.06
1683 2097 8.697846 AATTCATCTAATTTGCTTGACATGTG 57.302 30.769 1.15 0.00 33.91 3.21
1684 2098 6.822667 TCATCTAATTTGCTTGACATGTGT 57.177 33.333 1.15 0.00 0.00 3.72
1685 2099 7.218228 TCATCTAATTTGCTTGACATGTGTT 57.782 32.000 1.15 0.00 0.00 3.32
1686 2100 7.307694 TCATCTAATTTGCTTGACATGTGTTC 58.692 34.615 1.15 0.00 0.00 3.18
1687 2101 6.631971 TCTAATTTGCTTGACATGTGTTCA 57.368 33.333 1.15 0.00 0.00 3.18
1688 2102 6.671190 TCTAATTTGCTTGACATGTGTTCAG 58.329 36.000 1.15 0.00 0.00 3.02
1689 2103 4.924305 ATTTGCTTGACATGTGTTCAGT 57.076 36.364 1.15 0.00 0.00 3.41
1690 2104 6.389830 AATTTGCTTGACATGTGTTCAGTA 57.610 33.333 1.15 0.00 0.00 2.74
1691 2105 4.811555 TTGCTTGACATGTGTTCAGTAC 57.188 40.909 1.15 0.00 0.00 2.73
1692 2106 4.071961 TGCTTGACATGTGTTCAGTACT 57.928 40.909 1.15 0.00 0.00 2.73
1693 2107 4.058124 TGCTTGACATGTGTTCAGTACTC 58.942 43.478 1.15 0.00 0.00 2.59
1694 2108 3.433615 GCTTGACATGTGTTCAGTACTCC 59.566 47.826 1.15 0.00 0.00 3.85
1695 2109 3.297830 TGACATGTGTTCAGTACTCCG 57.702 47.619 1.15 0.00 0.00 4.63
1696 2110 2.888414 TGACATGTGTTCAGTACTCCGA 59.112 45.455 1.15 0.00 0.00 4.55
1697 2111 3.509967 TGACATGTGTTCAGTACTCCGAT 59.490 43.478 1.15 0.00 0.00 4.18
1698 2112 4.703093 TGACATGTGTTCAGTACTCCGATA 59.297 41.667 1.15 0.00 0.00 2.92
1699 2113 5.163652 TGACATGTGTTCAGTACTCCGATAG 60.164 44.000 1.15 0.00 0.00 2.08
1700 2114 4.705507 ACATGTGTTCAGTACTCCGATAGT 59.294 41.667 0.00 0.00 42.62 2.12
1701 2115 4.696899 TGTGTTCAGTACTCCGATAGTG 57.303 45.455 0.00 0.00 39.39 2.74
1702 2116 4.077108 TGTGTTCAGTACTCCGATAGTGT 58.923 43.478 0.00 0.00 39.39 3.55
1703 2117 4.082949 TGTGTTCAGTACTCCGATAGTGTG 60.083 45.833 0.00 0.00 39.39 3.82
1704 2118 4.077108 TGTTCAGTACTCCGATAGTGTGT 58.923 43.478 0.00 0.00 39.39 3.72
1705 2119 4.155462 TGTTCAGTACTCCGATAGTGTGTC 59.845 45.833 0.00 0.00 39.39 3.67
1706 2120 3.946606 TCAGTACTCCGATAGTGTGTCA 58.053 45.455 0.00 0.00 39.39 3.58
1707 2121 3.688185 TCAGTACTCCGATAGTGTGTCAC 59.312 47.826 0.00 0.00 39.39 3.67
1708 2122 3.439129 CAGTACTCCGATAGTGTGTCACA 59.561 47.826 0.18 0.18 39.39 3.58
1709 2123 4.096532 CAGTACTCCGATAGTGTGTCACAT 59.903 45.833 9.31 1.32 39.39 3.21
1710 2124 5.296035 CAGTACTCCGATAGTGTGTCACATA 59.704 44.000 9.31 3.55 39.39 2.29
1711 2125 6.017026 CAGTACTCCGATAGTGTGTCACATAT 60.017 42.308 9.31 8.06 39.39 1.78
1712 2126 7.172703 CAGTACTCCGATAGTGTGTCACATATA 59.827 40.741 9.31 6.16 39.39 0.86
1713 2127 6.954487 ACTCCGATAGTGTGTCACATATAA 57.046 37.500 9.31 0.00 36.93 0.98
1714 2128 6.971602 ACTCCGATAGTGTGTCACATATAAG 58.028 40.000 9.31 8.71 36.93 1.73
1715 2129 6.546403 ACTCCGATAGTGTGTCACATATAAGT 59.454 38.462 9.31 9.19 36.93 2.24
1716 2130 7.718314 ACTCCGATAGTGTGTCACATATAAGTA 59.282 37.037 9.31 0.00 36.93 2.24
1717 2131 8.454570 TCCGATAGTGTGTCACATATAAGTAA 57.545 34.615 9.31 0.00 36.74 2.24
1718 2132 8.565416 TCCGATAGTGTGTCACATATAAGTAAG 58.435 37.037 9.31 0.00 36.74 2.34
1719 2133 7.326305 CCGATAGTGTGTCACATATAAGTAAGC 59.674 40.741 9.31 0.00 36.74 3.09
1720 2134 8.076781 CGATAGTGTGTCACATATAAGTAAGCT 58.923 37.037 9.31 0.01 36.74 3.74
1721 2135 9.186323 GATAGTGTGTCACATATAAGTAAGCTG 57.814 37.037 9.31 0.00 36.74 4.24
1722 2136 7.170393 AGTGTGTCACATATAAGTAAGCTGA 57.830 36.000 9.31 0.00 36.74 4.26
1723 2137 7.036220 AGTGTGTCACATATAAGTAAGCTGAC 58.964 38.462 9.31 0.00 36.74 3.51
1724 2138 7.036220 GTGTGTCACATATAAGTAAGCTGACT 58.964 38.462 9.31 0.00 34.08 3.41
1725 2139 7.009631 GTGTGTCACATATAAGTAAGCTGACTG 59.990 40.741 3.88 0.00 34.08 3.51
1726 2140 7.036220 GTGTCACATATAAGTAAGCTGACTGT 58.964 38.462 3.88 0.00 0.00 3.55
1727 2141 7.545965 GTGTCACATATAAGTAAGCTGACTGTT 59.454 37.037 3.88 0.00 0.00 3.16
1728 2142 8.745590 TGTCACATATAAGTAAGCTGACTGTTA 58.254 33.333 3.88 0.03 0.00 2.41
1729 2143 9.582431 GTCACATATAAGTAAGCTGACTGTTAA 57.418 33.333 3.88 0.00 0.00 2.01
1730 2144 9.582431 TCACATATAAGTAAGCTGACTGTTAAC 57.418 33.333 3.88 0.00 0.00 2.01
1731 2145 8.818057 CACATATAAGTAAGCTGACTGTTAACC 58.182 37.037 3.88 0.00 0.00 2.85
1732 2146 7.705325 ACATATAAGTAAGCTGACTGTTAACCG 59.295 37.037 3.88 0.00 0.00 4.44
1733 2147 4.595762 AAGTAAGCTGACTGTTAACCGA 57.404 40.909 3.88 0.00 0.00 4.69
1734 2148 4.803098 AGTAAGCTGACTGTTAACCGAT 57.197 40.909 1.74 0.00 0.00 4.18
1735 2149 5.148651 AGTAAGCTGACTGTTAACCGATT 57.851 39.130 1.74 0.00 0.00 3.34
1736 2150 5.548406 AGTAAGCTGACTGTTAACCGATTT 58.452 37.500 1.74 0.00 0.00 2.17
1737 2151 5.638234 AGTAAGCTGACTGTTAACCGATTTC 59.362 40.000 1.74 0.00 0.00 2.17
1738 2152 4.002906 AGCTGACTGTTAACCGATTTCA 57.997 40.909 2.48 0.00 0.00 2.69
1739 2153 4.385825 AGCTGACTGTTAACCGATTTCAA 58.614 39.130 2.48 0.00 0.00 2.69
1740 2154 4.819630 AGCTGACTGTTAACCGATTTCAAA 59.180 37.500 2.48 0.00 0.00 2.69
1741 2155 5.473504 AGCTGACTGTTAACCGATTTCAAAT 59.526 36.000 2.48 0.00 0.00 2.32
1742 2156 6.016276 AGCTGACTGTTAACCGATTTCAAATT 60.016 34.615 2.48 0.00 0.00 1.82
1743 2157 7.174253 AGCTGACTGTTAACCGATTTCAAATTA 59.826 33.333 2.48 0.00 0.00 1.40
1744 2158 7.968405 GCTGACTGTTAACCGATTTCAAATTAT 59.032 33.333 2.48 0.00 0.00 1.28
1745 2159 9.490663 CTGACTGTTAACCGATTTCAAATTATC 57.509 33.333 2.48 0.00 0.00 1.75
1746 2160 9.226606 TGACTGTTAACCGATTTCAAATTATCT 57.773 29.630 2.48 0.00 0.00 1.98
1747 2161 9.704098 GACTGTTAACCGATTTCAAATTATCTC 57.296 33.333 2.48 0.00 0.00 2.75
1748 2162 9.449719 ACTGTTAACCGATTTCAAATTATCTCT 57.550 29.630 2.48 0.00 0.00 3.10
1754 2168 8.240883 ACCGATTTCAAATTATCTCTATACGC 57.759 34.615 0.00 0.00 0.00 4.42
1755 2169 7.870954 ACCGATTTCAAATTATCTCTATACGCA 59.129 33.333 0.00 0.00 0.00 5.24
1756 2170 8.873830 CCGATTTCAAATTATCTCTATACGCAT 58.126 33.333 0.00 0.00 0.00 4.73
1762 2176 9.154847 TCAAATTATCTCTATACGCATTCATGG 57.845 33.333 0.00 0.00 0.00 3.66
1763 2177 8.939929 CAAATTATCTCTATACGCATTCATGGT 58.060 33.333 0.00 0.00 0.00 3.55
1766 2180 9.755804 ATTATCTCTATACGCATTCATGGTATG 57.244 33.333 0.00 0.00 31.39 2.39
1767 2181 6.590234 TCTCTATACGCATTCATGGTATGT 57.410 37.500 9.49 0.00 31.39 2.29
1768 2182 7.696992 TCTCTATACGCATTCATGGTATGTA 57.303 36.000 9.49 1.04 31.39 2.29
1769 2183 8.293699 TCTCTATACGCATTCATGGTATGTAT 57.706 34.615 9.49 7.01 31.39 2.29
1770 2184 8.749354 TCTCTATACGCATTCATGGTATGTATT 58.251 33.333 9.49 0.27 31.39 1.89
1775 2189 7.377766 ACGCATTCATGGTATGTATTATTCC 57.622 36.000 9.49 0.00 0.00 3.01
1776 2190 6.939730 ACGCATTCATGGTATGTATTATTCCA 59.060 34.615 9.49 0.00 0.00 3.53
1777 2191 7.611467 ACGCATTCATGGTATGTATTATTCCAT 59.389 33.333 9.49 0.00 39.14 3.41
1778 2192 9.108284 CGCATTCATGGTATGTATTATTCCATA 57.892 33.333 9.49 0.00 37.16 2.74
1795 2209 7.986553 ATTCCATATTTTGTCCCATTAACCA 57.013 32.000 0.00 0.00 0.00 3.67
1796 2210 6.783708 TCCATATTTTGTCCCATTAACCAC 57.216 37.500 0.00 0.00 0.00 4.16
1797 2211 6.498538 TCCATATTTTGTCCCATTAACCACT 58.501 36.000 0.00 0.00 0.00 4.00
1798 2212 6.957020 TCCATATTTTGTCCCATTAACCACTT 59.043 34.615 0.00 0.00 0.00 3.16
1799 2213 7.456269 TCCATATTTTGTCCCATTAACCACTTT 59.544 33.333 0.00 0.00 0.00 2.66
1800 2214 8.100164 CCATATTTTGTCCCATTAACCACTTTT 58.900 33.333 0.00 0.00 0.00 2.27
1801 2215 9.150348 CATATTTTGTCCCATTAACCACTTTTC 57.850 33.333 0.00 0.00 0.00 2.29
1802 2216 6.800072 TTTTGTCCCATTAACCACTTTTCT 57.200 33.333 0.00 0.00 0.00 2.52
1803 2217 6.399639 TTTGTCCCATTAACCACTTTTCTC 57.600 37.500 0.00 0.00 0.00 2.87
1804 2218 5.319043 TGTCCCATTAACCACTTTTCTCT 57.681 39.130 0.00 0.00 0.00 3.10
1805 2219 5.313712 TGTCCCATTAACCACTTTTCTCTC 58.686 41.667 0.00 0.00 0.00 3.20
1806 2220 5.073144 TGTCCCATTAACCACTTTTCTCTCT 59.927 40.000 0.00 0.00 0.00 3.10
1807 2221 5.644206 GTCCCATTAACCACTTTTCTCTCTC 59.356 44.000 0.00 0.00 0.00 3.20
1808 2222 4.944317 CCCATTAACCACTTTTCTCTCTCC 59.056 45.833 0.00 0.00 0.00 3.71
1809 2223 5.280727 CCCATTAACCACTTTTCTCTCTCCT 60.281 44.000 0.00 0.00 0.00 3.69
1810 2224 5.645497 CCATTAACCACTTTTCTCTCTCCTG 59.355 44.000 0.00 0.00 0.00 3.86
1811 2225 6.467677 CATTAACCACTTTTCTCTCTCCTGA 58.532 40.000 0.00 0.00 0.00 3.86
1812 2226 4.344359 AACCACTTTTCTCTCTCCTGAC 57.656 45.455 0.00 0.00 0.00 3.51
1813 2227 3.309296 ACCACTTTTCTCTCTCCTGACA 58.691 45.455 0.00 0.00 0.00 3.58
1814 2228 3.906846 ACCACTTTTCTCTCTCCTGACAT 59.093 43.478 0.00 0.00 0.00 3.06
1815 2229 4.252073 CCACTTTTCTCTCTCCTGACATG 58.748 47.826 0.00 0.00 0.00 3.21
1816 2230 4.262808 CCACTTTTCTCTCTCCTGACATGT 60.263 45.833 0.00 0.00 0.00 3.21
1817 2231 4.928615 CACTTTTCTCTCTCCTGACATGTC 59.071 45.833 19.27 19.27 0.00 3.06
1818 2232 4.590647 ACTTTTCTCTCTCCTGACATGTCA 59.409 41.667 26.33 26.33 38.06 3.58
1819 2233 5.070981 ACTTTTCTCTCTCCTGACATGTCAA 59.929 40.000 27.63 14.32 39.39 3.18
1820 2234 4.797800 TTCTCTCTCCTGACATGTCAAG 57.202 45.455 27.63 22.27 39.39 3.02
1821 2235 2.495270 TCTCTCTCCTGACATGTCAAGC 59.505 50.000 27.63 2.50 39.39 4.01
1822 2236 1.552337 TCTCTCCTGACATGTCAAGCC 59.448 52.381 27.63 2.10 39.39 4.35
1823 2237 0.615331 TCTCCTGACATGTCAAGCCC 59.385 55.000 27.63 1.33 39.39 5.19
1824 2238 0.325933 CTCCTGACATGTCAAGCCCA 59.674 55.000 27.63 7.03 39.39 5.36
1825 2239 0.036732 TCCTGACATGTCAAGCCCAC 59.963 55.000 27.63 0.00 39.39 4.61
1826 2240 1.300971 CCTGACATGTCAAGCCCACG 61.301 60.000 27.63 14.72 39.39 4.94
1827 2241 1.300971 CTGACATGTCAAGCCCACGG 61.301 60.000 27.63 11.05 39.39 4.94
1828 2242 1.302511 GACATGTCAAGCCCACGGT 60.303 57.895 21.07 0.00 0.00 4.83
1829 2243 0.889186 GACATGTCAAGCCCACGGTT 60.889 55.000 21.07 0.00 0.00 4.44
1830 2244 0.398696 ACATGTCAAGCCCACGGTTA 59.601 50.000 0.00 0.00 0.00 2.85
1831 2245 1.086696 CATGTCAAGCCCACGGTTAG 58.913 55.000 0.00 0.00 0.00 2.34
1832 2246 0.981183 ATGTCAAGCCCACGGTTAGA 59.019 50.000 0.00 0.00 0.00 2.10
1833 2247 0.034337 TGTCAAGCCCACGGTTAGAC 59.966 55.000 0.00 0.00 32.71 2.59
1834 2248 0.320697 GTCAAGCCCACGGTTAGACT 59.679 55.000 0.00 0.00 31.04 3.24
1835 2249 0.606604 TCAAGCCCACGGTTAGACTC 59.393 55.000 0.00 0.00 0.00 3.36
1836 2250 0.736325 CAAGCCCACGGTTAGACTCG 60.736 60.000 0.00 0.00 0.00 4.18
1837 2251 1.885163 AAGCCCACGGTTAGACTCGG 61.885 60.000 0.00 0.00 0.00 4.63
1838 2252 2.345760 GCCCACGGTTAGACTCGGA 61.346 63.158 0.00 0.00 0.00 4.55
1839 2253 1.807886 CCCACGGTTAGACTCGGAG 59.192 63.158 2.83 2.83 0.00 4.63
1840 2254 1.664321 CCCACGGTTAGACTCGGAGG 61.664 65.000 10.23 0.00 0.00 4.30
1841 2255 1.139095 CACGGTTAGACTCGGAGGC 59.861 63.158 10.23 6.31 0.00 4.70
1842 2256 2.050934 ACGGTTAGACTCGGAGGCC 61.051 63.158 7.38 0.00 0.00 5.19
1843 2257 2.050350 CGGTTAGACTCGGAGGCCA 61.050 63.158 7.38 0.00 0.00 5.36
1844 2258 1.516423 GGTTAGACTCGGAGGCCAC 59.484 63.158 7.38 4.69 0.00 5.01
1845 2259 1.139095 GTTAGACTCGGAGGCCACG 59.861 63.158 7.38 9.92 0.00 4.94
1846 2260 1.303888 TTAGACTCGGAGGCCACGT 60.304 57.895 17.69 0.00 0.00 4.49
1847 2261 0.035152 TTAGACTCGGAGGCCACGTA 60.035 55.000 17.69 5.96 0.00 3.57
1848 2262 0.035152 TAGACTCGGAGGCCACGTAA 60.035 55.000 17.69 1.09 0.00 3.18
1849 2263 1.153881 GACTCGGAGGCCACGTAAC 60.154 63.158 17.69 8.00 0.00 2.50
1850 2264 1.593296 GACTCGGAGGCCACGTAACT 61.593 60.000 17.69 1.54 0.00 2.24
1851 2265 1.183676 ACTCGGAGGCCACGTAACTT 61.184 55.000 17.69 0.00 0.00 2.66
1852 2266 0.813184 CTCGGAGGCCACGTAACTTA 59.187 55.000 17.69 0.00 0.00 2.24
1853 2267 1.407979 CTCGGAGGCCACGTAACTTAT 59.592 52.381 17.69 0.00 0.00 1.73
1854 2268 2.620115 CTCGGAGGCCACGTAACTTATA 59.380 50.000 17.69 0.00 0.00 0.98
1855 2269 3.225104 TCGGAGGCCACGTAACTTATAT 58.775 45.455 17.69 0.00 0.00 0.86
1856 2270 3.638160 TCGGAGGCCACGTAACTTATATT 59.362 43.478 17.69 0.00 0.00 1.28
1857 2271 3.739300 CGGAGGCCACGTAACTTATATTG 59.261 47.826 5.01 0.00 0.00 1.90
1858 2272 4.062991 GGAGGCCACGTAACTTATATTGG 58.937 47.826 5.01 0.00 0.00 3.16
1859 2273 4.202284 GGAGGCCACGTAACTTATATTGGA 60.202 45.833 5.01 0.00 0.00 3.53
1860 2274 5.362105 AGGCCACGTAACTTATATTGGAA 57.638 39.130 5.01 0.00 0.00 3.53
1861 2275 5.747342 AGGCCACGTAACTTATATTGGAAA 58.253 37.500 5.01 0.00 0.00 3.13
1862 2276 6.181908 AGGCCACGTAACTTATATTGGAAAA 58.818 36.000 5.01 0.00 0.00 2.29
1863 2277 6.831868 AGGCCACGTAACTTATATTGGAAAAT 59.168 34.615 5.01 0.00 0.00 1.82
1864 2278 7.994334 AGGCCACGTAACTTATATTGGAAAATA 59.006 33.333 5.01 0.00 0.00 1.40
1865 2279 8.623030 GGCCACGTAACTTATATTGGAAAATAA 58.377 33.333 0.00 0.00 0.00 1.40
1921 2335 9.927081 ATATCTCACCAATTTTATCTCCAAACT 57.073 29.630 0.00 0.00 0.00 2.66
1922 2336 8.655935 ATCTCACCAATTTTATCTCCAAACTT 57.344 30.769 0.00 0.00 0.00 2.66
1923 2337 8.477419 TCTCACCAATTTTATCTCCAAACTTT 57.523 30.769 0.00 0.00 0.00 2.66
1924 2338 8.923270 TCTCACCAATTTTATCTCCAAACTTTT 58.077 29.630 0.00 0.00 0.00 2.27
1925 2339 9.196552 CTCACCAATTTTATCTCCAAACTTTTC 57.803 33.333 0.00 0.00 0.00 2.29
1926 2340 8.923270 TCACCAATTTTATCTCCAAACTTTTCT 58.077 29.630 0.00 0.00 0.00 2.52
1927 2341 8.981647 CACCAATTTTATCTCCAAACTTTTCTG 58.018 33.333 0.00 0.00 0.00 3.02
1928 2342 8.704668 ACCAATTTTATCTCCAAACTTTTCTGT 58.295 29.630 0.00 0.00 0.00 3.41
1932 2346 9.914131 ATTTTATCTCCAAACTTTTCTGTAAGC 57.086 29.630 0.00 0.00 0.00 3.09
1933 2347 8.458573 TTTATCTCCAAACTTTTCTGTAAGCA 57.541 30.769 0.00 0.00 0.00 3.91
1934 2348 8.635765 TTATCTCCAAACTTTTCTGTAAGCAT 57.364 30.769 0.00 0.00 0.00 3.79
1935 2349 9.733556 TTATCTCCAAACTTTTCTGTAAGCATA 57.266 29.630 0.00 0.00 0.00 3.14
1936 2350 8.635765 ATCTCCAAACTTTTCTGTAAGCATAA 57.364 30.769 0.00 0.00 0.00 1.90
1937 2351 8.635765 TCTCCAAACTTTTCTGTAAGCATAAT 57.364 30.769 0.00 0.00 0.00 1.28
1938 2352 8.514594 TCTCCAAACTTTTCTGTAAGCATAATG 58.485 33.333 0.00 0.00 0.00 1.90
1939 2353 8.177119 TCCAAACTTTTCTGTAAGCATAATGT 57.823 30.769 0.00 0.00 0.00 2.71
1940 2354 9.290988 TCCAAACTTTTCTGTAAGCATAATGTA 57.709 29.630 0.00 0.00 0.00 2.29
1941 2355 9.906660 CCAAACTTTTCTGTAAGCATAATGTAA 57.093 29.630 0.00 0.00 0.00 2.41
1945 2359 9.893305 ACTTTTCTGTAAGCATAATGTAAACAC 57.107 29.630 0.00 0.00 0.00 3.32
1946 2360 9.891828 CTTTTCTGTAAGCATAATGTAAACACA 57.108 29.630 0.00 0.00 0.00 3.72
1950 2364 9.884636 TCTGTAAGCATAATGTAAACACATACT 57.115 29.630 0.00 0.00 0.00 2.12
1995 2409 9.638239 TTGTTTTCATTCTAAATAAGGCACATC 57.362 29.630 0.00 0.00 0.00 3.06
1996 2410 9.023962 TGTTTTCATTCTAAATAAGGCACATCT 57.976 29.630 0.00 0.00 0.00 2.90
1997 2411 9.508567 GTTTTCATTCTAAATAAGGCACATCTC 57.491 33.333 0.00 0.00 0.00 2.75
1998 2412 8.806429 TTTCATTCTAAATAAGGCACATCTCA 57.194 30.769 0.00 0.00 0.00 3.27
1999 2413 8.442632 TTCATTCTAAATAAGGCACATCTCAG 57.557 34.615 0.00 0.00 0.00 3.35
2000 2414 6.994496 TCATTCTAAATAAGGCACATCTCAGG 59.006 38.462 0.00 0.00 0.00 3.86
2001 2415 5.296151 TCTAAATAAGGCACATCTCAGGG 57.704 43.478 0.00 0.00 0.00 4.45
2002 2416 3.303351 AAATAAGGCACATCTCAGGGG 57.697 47.619 0.00 0.00 0.00 4.79
2003 2417 1.898863 ATAAGGCACATCTCAGGGGT 58.101 50.000 0.00 0.00 0.00 4.95
2004 2418 2.561209 TAAGGCACATCTCAGGGGTA 57.439 50.000 0.00 0.00 0.00 3.69
2005 2419 1.668826 AAGGCACATCTCAGGGGTAA 58.331 50.000 0.00 0.00 0.00 2.85
2006 2420 1.207791 AGGCACATCTCAGGGGTAAG 58.792 55.000 0.00 0.00 0.00 2.34
2007 2421 1.204146 GGCACATCTCAGGGGTAAGA 58.796 55.000 0.00 0.00 0.00 2.10
2008 2422 1.559682 GGCACATCTCAGGGGTAAGAA 59.440 52.381 0.00 0.00 0.00 2.52
2009 2423 2.026262 GGCACATCTCAGGGGTAAGAAA 60.026 50.000 0.00 0.00 0.00 2.52
2010 2424 3.274288 GCACATCTCAGGGGTAAGAAAG 58.726 50.000 0.00 0.00 0.00 2.62
2011 2425 3.055094 GCACATCTCAGGGGTAAGAAAGA 60.055 47.826 0.00 0.00 0.00 2.52
2012 2426 4.384647 GCACATCTCAGGGGTAAGAAAGAT 60.385 45.833 0.00 0.00 0.00 2.40
2013 2427 5.121811 CACATCTCAGGGGTAAGAAAGATG 58.878 45.833 8.25 8.25 43.54 2.90
2014 2428 4.164988 ACATCTCAGGGGTAAGAAAGATGG 59.835 45.833 13.07 0.00 42.68 3.51
2015 2429 4.074799 TCTCAGGGGTAAGAAAGATGGA 57.925 45.455 0.00 0.00 0.00 3.41
2016 2430 4.635473 TCTCAGGGGTAAGAAAGATGGAT 58.365 43.478 0.00 0.00 0.00 3.41
2017 2431 5.788430 TCTCAGGGGTAAGAAAGATGGATA 58.212 41.667 0.00 0.00 0.00 2.59
2018 2432 6.209774 TCTCAGGGGTAAGAAAGATGGATAA 58.790 40.000 0.00 0.00 0.00 1.75
2019 2433 6.676632 TCTCAGGGGTAAGAAAGATGGATAAA 59.323 38.462 0.00 0.00 0.00 1.40
2020 2434 7.350921 TCTCAGGGGTAAGAAAGATGGATAAAT 59.649 37.037 0.00 0.00 0.00 1.40
2021 2435 7.882755 TCAGGGGTAAGAAAGATGGATAAATT 58.117 34.615 0.00 0.00 0.00 1.82
2022 2436 7.998964 TCAGGGGTAAGAAAGATGGATAAATTC 59.001 37.037 0.00 0.00 0.00 2.17
2023 2437 8.001292 CAGGGGTAAGAAAGATGGATAAATTCT 58.999 37.037 0.00 0.00 31.98 2.40
2024 2438 9.237706 AGGGGTAAGAAAGATGGATAAATTCTA 57.762 33.333 0.00 0.00 30.56 2.10
2025 2439 9.862149 GGGGTAAGAAAGATGGATAAATTCTAA 57.138 33.333 0.00 0.00 30.56 2.10
2045 2459 9.807649 ATTCTAAAATTGAGTATTCATTGGCAC 57.192 29.630 0.00 0.00 32.27 5.01
2046 2460 8.579850 TCTAAAATTGAGTATTCATTGGCACT 57.420 30.769 0.00 0.00 32.27 4.40
2047 2461 9.023962 TCTAAAATTGAGTATTCATTGGCACTT 57.976 29.630 0.00 0.00 32.27 3.16
2048 2462 9.643693 CTAAAATTGAGTATTCATTGGCACTTT 57.356 29.630 0.00 0.00 32.27 2.66
2049 2463 7.894376 AAATTGAGTATTCATTGGCACTTTG 57.106 32.000 0.00 0.00 32.27 2.77
2050 2464 6.839124 ATTGAGTATTCATTGGCACTTTGA 57.161 33.333 0.00 0.00 32.27 2.69
2051 2465 6.839124 TTGAGTATTCATTGGCACTTTGAT 57.161 33.333 0.00 0.00 32.27 2.57
2052 2466 6.198650 TGAGTATTCATTGGCACTTTGATG 57.801 37.500 0.00 0.00 0.00 3.07
2053 2467 5.002464 AGTATTCATTGGCACTTTGATGC 57.998 39.130 0.00 0.00 45.34 3.91
2059 2473 3.667087 GCACTTTGATGCCGTCCA 58.333 55.556 0.00 0.00 39.86 4.02
2060 2474 1.210155 GCACTTTGATGCCGTCCAC 59.790 57.895 0.00 0.00 39.86 4.02
2061 2475 1.875963 CACTTTGATGCCGTCCACC 59.124 57.895 0.00 0.00 0.00 4.61
2062 2476 1.303317 ACTTTGATGCCGTCCACCC 60.303 57.895 0.00 0.00 0.00 4.61
2063 2477 2.034999 TTTGATGCCGTCCACCCC 59.965 61.111 0.00 0.00 0.00 4.95
2064 2478 3.910914 TTTGATGCCGTCCACCCCG 62.911 63.158 0.00 0.00 0.00 5.73
2070 2484 3.834799 CCGTCCACCCCGCTCTAC 61.835 72.222 0.00 0.00 0.00 2.59
2071 2485 3.066190 CGTCCACCCCGCTCTACA 61.066 66.667 0.00 0.00 0.00 2.74
2072 2486 2.577593 GTCCACCCCGCTCTACAC 59.422 66.667 0.00 0.00 0.00 2.90
2073 2487 1.982938 GTCCACCCCGCTCTACACT 60.983 63.158 0.00 0.00 0.00 3.55
2074 2488 1.982395 TCCACCCCGCTCTACACTG 60.982 63.158 0.00 0.00 0.00 3.66
2075 2489 2.283529 CCACCCCGCTCTACACTGT 61.284 63.158 0.00 0.00 0.00 3.55
2076 2490 1.215647 CACCCCGCTCTACACTGTC 59.784 63.158 0.00 0.00 0.00 3.51
2077 2491 1.076906 ACCCCGCTCTACACTGTCT 59.923 57.895 0.00 0.00 0.00 3.41
2078 2492 0.330604 ACCCCGCTCTACACTGTCTA 59.669 55.000 0.00 0.00 0.00 2.59
2079 2493 0.739561 CCCCGCTCTACACTGTCTAC 59.260 60.000 0.00 0.00 0.00 2.59
2080 2494 0.377554 CCCGCTCTACACTGTCTACG 59.622 60.000 0.00 0.00 0.00 3.51
2081 2495 0.248134 CCGCTCTACACTGTCTACGC 60.248 60.000 0.00 0.00 0.00 4.42
2082 2496 0.248134 CGCTCTACACTGTCTACGCC 60.248 60.000 0.00 0.00 0.00 5.68
2083 2497 0.248134 GCTCTACACTGTCTACGCCG 60.248 60.000 0.00 0.00 0.00 6.46
2084 2498 0.248134 CTCTACACTGTCTACGCCGC 60.248 60.000 0.00 0.00 0.00 6.53
2085 2499 1.226603 CTACACTGTCTACGCCGCC 60.227 63.158 0.00 0.00 0.00 6.13
2086 2500 1.929806 CTACACTGTCTACGCCGCCA 61.930 60.000 0.00 0.00 0.00 5.69
2087 2501 2.203972 TACACTGTCTACGCCGCCAC 62.204 60.000 0.00 0.00 0.00 5.01
2088 2502 4.065281 ACTGTCTACGCCGCCACC 62.065 66.667 0.00 0.00 0.00 4.61
2089 2503 4.063967 CTGTCTACGCCGCCACCA 62.064 66.667 0.00 0.00 0.00 4.17
2090 2504 3.583276 CTGTCTACGCCGCCACCAA 62.583 63.158 0.00 0.00 0.00 3.67
2091 2505 2.813908 GTCTACGCCGCCACCAAG 60.814 66.667 0.00 0.00 0.00 3.61
2092 2506 4.077184 TCTACGCCGCCACCAAGG 62.077 66.667 0.00 0.00 41.84 3.61
2101 2515 4.278956 CCACCAAGGCGTGAGTAC 57.721 61.111 0.76 0.00 35.68 2.73
2102 2516 1.375523 CCACCAAGGCGTGAGTACC 60.376 63.158 0.76 0.00 35.68 3.34
2103 2517 1.736645 CACCAAGGCGTGAGTACCG 60.737 63.158 0.76 0.00 35.68 4.02
2113 2527 4.208686 GAGTACCGCTCGGCCCTG 62.209 72.222 8.41 0.00 39.32 4.45
2115 2529 4.509737 GTACCGCTCGGCCCTGTC 62.510 72.222 8.41 0.00 39.32 3.51
2128 2542 1.897560 CCCTGTCCTTGAACCACTTC 58.102 55.000 0.00 0.00 0.00 3.01
2156 2570 9.601217 GAAGTTAGTTTCATTCTTGCTATAGGA 57.399 33.333 1.04 0.00 0.00 2.94
2160 2574 9.959721 TTAGTTTCATTCTTGCTATAGGAGTTT 57.040 29.630 1.04 0.00 0.00 2.66
2230 2649 5.869350 CGAAGTGATTCGCCTAAGAAAAAT 58.131 37.500 0.00 0.00 37.65 1.82
2292 2713 5.296035 ACTCGTTCTAGGTTTTTGTTCCTTG 59.704 40.000 0.00 0.00 35.51 3.61
2342 2770 7.158243 CGTAAGTAGGAACCGACATTTATTC 57.842 40.000 6.84 0.00 0.00 1.75
2386 2821 5.648960 TCTGATTTGCTTGATATGTGCTCAA 59.351 36.000 0.00 0.00 0.00 3.02
2617 3134 6.208599 TGTCTCACCAATTTTATCTCCAAACC 59.791 38.462 0.00 0.00 0.00 3.27
2664 3184 8.408601 ACACATGCTGAATTTCCTCATATTTAC 58.591 33.333 0.00 0.00 0.00 2.01
2691 3623 4.448210 TCCGTTCTAAATAAGGCACATCC 58.552 43.478 0.00 0.00 0.00 3.51
2693 3625 4.451900 CGTTCTAAATAAGGCACATCCCT 58.548 43.478 0.00 0.00 36.58 4.20
2713 3680 3.270877 CTGGGGTAAGAAACTTCGATGG 58.729 50.000 3.12 0.00 0.00 3.51
2811 3783 2.845019 TGCTCAAATCTGCAGACCG 58.155 52.632 20.97 10.56 34.84 4.79
2813 3785 1.275010 TGCTCAAATCTGCAGACCGTA 59.725 47.619 20.97 4.49 34.84 4.02
2907 3888 5.950544 AATTGCACACACTAGGATAGGTA 57.049 39.130 0.00 0.00 44.97 3.08
2908 3889 5.537300 ATTGCACACACTAGGATAGGTAG 57.463 43.478 0.00 0.00 44.97 3.18
2909 3890 3.977312 TGCACACACTAGGATAGGTAGT 58.023 45.455 0.00 0.00 44.97 2.73
3053 4151 1.530720 CAAGAAGTATGTGTGCGTGCA 59.469 47.619 0.00 0.00 0.00 4.57
3084 4182 6.128634 GGAAGAAAGTTACATAACCACTCGTG 60.129 42.308 0.00 0.00 36.88 4.35
3157 4256 8.784043 AGAACAGGTAATGAAACTAATGTGTTC 58.216 33.333 0.00 0.00 40.08 3.18
3245 4344 1.672881 GATGTGCAATGCCAGGTACTC 59.327 52.381 1.53 0.00 34.60 2.59
3246 4345 0.322456 TGTGCAATGCCAGGTACTCC 60.322 55.000 1.53 0.00 34.60 3.85
3280 4533 0.037326 TCTTGTAGAGGGCTGTTGCG 60.037 55.000 0.00 0.00 40.82 4.85
3285 4538 0.685097 TAGAGGGCTGTTGCGTTTCT 59.315 50.000 0.00 0.00 40.82 2.52
3326 4590 1.001860 TGTCAGGCATCGTGATGTTCA 59.998 47.619 11.23 2.35 40.80 3.18
3327 4591 1.394917 GTCAGGCATCGTGATGTTCAC 59.605 52.381 11.23 0.00 43.65 3.18
3398 4706 1.648116 TCTACCACCCCACCAGTTAC 58.352 55.000 0.00 0.00 0.00 2.50
3449 4806 4.468510 ACATGGATTTTCTCATTGTGGCAT 59.531 37.500 0.00 0.00 0.00 4.40
3643 5034 2.696775 TCCTACTGTTTGGTCCAAGGA 58.303 47.619 4.09 3.99 0.00 3.36
3659 5050 5.760743 GTCCAAGGAAGTAATAATCAGGAGC 59.239 44.000 0.00 0.00 0.00 4.70
3664 5055 8.370940 CAAGGAAGTAATAATCAGGAGCTATGA 58.629 37.037 3.73 3.73 0.00 2.15
3680 5071 6.183360 GGAGCTATGAACTTATCAGTGTCAGA 60.183 42.308 0.00 0.00 42.53 3.27
3708 5116 4.331168 CCGTCAAACTGAATGAATCTCTCC 59.669 45.833 0.00 0.00 0.00 3.71
3878 5286 2.534990 CTCCTGTGGTTCCTCTTCTCT 58.465 52.381 0.00 0.00 0.00 3.10
4009 5420 0.949105 AAGAAAGGGCACGTACGCTG 60.949 55.000 16.72 13.72 32.43 5.18
4034 5445 6.319658 GGCAAAGATGGACTCAGATGAAAATA 59.680 38.462 0.00 0.00 0.00 1.40
4036 5447 7.861372 GCAAAGATGGACTCAGATGAAAATATG 59.139 37.037 0.00 0.00 0.00 1.78
4057 5468 9.448438 AATATGTGTGTTAATTCTACAGCTTCA 57.552 29.630 0.00 0.00 0.00 3.02
4058 5469 7.928307 ATGTGTGTTAATTCTACAGCTTCAT 57.072 32.000 0.00 0.00 0.00 2.57
4059 5470 7.132694 TGTGTGTTAATTCTACAGCTTCATG 57.867 36.000 0.00 0.00 0.00 3.07
4060 5471 6.710295 TGTGTGTTAATTCTACAGCTTCATGT 59.290 34.615 0.00 0.00 37.19 3.21
4061 5472 7.875554 TGTGTGTTAATTCTACAGCTTCATGTA 59.124 33.333 0.00 0.00 34.56 2.29
4062 5473 8.169268 GTGTGTTAATTCTACAGCTTCATGTAC 58.831 37.037 0.00 0.00 34.56 2.90
4063 5474 8.094548 TGTGTTAATTCTACAGCTTCATGTACT 58.905 33.333 0.00 0.00 34.56 2.73
4064 5475 8.596380 GTGTTAATTCTACAGCTTCATGTACTC 58.404 37.037 0.00 0.00 34.56 2.59
4065 5476 8.311109 TGTTAATTCTACAGCTTCATGTACTCA 58.689 33.333 0.00 0.00 34.56 3.41
4066 5477 9.151471 GTTAATTCTACAGCTTCATGTACTCAA 57.849 33.333 0.00 0.00 34.56 3.02
4067 5478 9.719355 TTAATTCTACAGCTTCATGTACTCAAA 57.281 29.630 0.00 0.00 34.56 2.69
4068 5479 8.621532 AATTCTACAGCTTCATGTACTCAAAA 57.378 30.769 0.00 0.00 34.56 2.44
4069 5480 8.621532 ATTCTACAGCTTCATGTACTCAAAAA 57.378 30.769 0.00 0.00 34.56 1.94
4124 5535 0.781787 CGACGAACGACTGAATGCAA 59.218 50.000 0.14 0.00 45.77 4.08
4158 5577 7.841729 TCCCCTTCCAAGCAATTTTATTGTATA 59.158 33.333 0.00 0.00 0.00 1.47
4315 5735 2.113774 CAACACTGGCTGCCCTCA 59.886 61.111 17.53 0.00 0.00 3.86
4327 5747 0.555769 TGCCCTCAAAAAGTCCAGGT 59.444 50.000 0.00 0.00 0.00 4.00
4340 5760 0.044092 TCCAGGTGCCTCCTTCCATA 59.956 55.000 0.00 0.00 45.67 2.74
4357 5777 6.428159 CCTTCCATAACTTTATCCCAATCTCG 59.572 42.308 0.00 0.00 0.00 4.04
4381 5805 2.481185 GGCAAGAAAATTGCATGGTGTG 59.519 45.455 13.94 0.00 46.58 3.82
4388 5812 4.420522 AAATTGCATGGTGTGAAGGTTT 57.579 36.364 0.00 0.00 0.00 3.27
4411 5835 9.994432 GTTTTTACTCAATGATCAGAAATCGAT 57.006 29.630 0.09 0.00 0.00 3.59
4433 5857 4.081322 AGTGTTGGGAAACGTAGAATGT 57.919 40.909 0.00 0.00 0.00 2.71
4498 5922 0.975556 TGCATAGCAACGAGAGGGGA 60.976 55.000 0.00 0.00 34.76 4.81
4508 5933 0.969894 CGAGAGGGGAAGAGTGTGTT 59.030 55.000 0.00 0.00 0.00 3.32
4568 5994 0.997196 GCGGTTGATGTAGTCGAACC 59.003 55.000 0.00 0.00 35.98 3.62
4584 6010 2.226912 CGAACCTCTTCTCGTTCTGACT 59.773 50.000 0.00 0.00 36.94 3.41
4595 6021 2.297315 TCGTTCTGACTGATCAAGCACT 59.703 45.455 0.00 0.00 33.30 4.40
4614 6040 1.154150 GAACGTACGACACCTCCGG 60.154 63.158 24.41 0.00 0.00 5.14
4643 6069 1.322637 CACGTTCAGCTCGATGACATG 59.677 52.381 0.00 0.00 0.00 3.21
4806 6247 2.542824 GCACACGGCTAACAATTGTTGT 60.543 45.455 29.72 17.78 42.44 3.32
4923 6378 1.345715 CCTAGTCCAATTCGCCCCCT 61.346 60.000 0.00 0.00 0.00 4.79
4934 6389 2.698406 GCCCCCTCCCCCACATTA 60.698 66.667 0.00 0.00 0.00 1.90
4947 6402 4.383173 CCCCACATTACTTATTACCGGAC 58.617 47.826 9.46 0.00 0.00 4.79
4959 6422 2.745255 TACCGGACGGGGGAAAAGGA 62.745 60.000 9.46 0.00 41.60 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 1.000896 GGAGCAAAGCTAAGCCCCA 60.001 57.895 6.06 0.00 39.88 4.96
125 156 3.316588 GGTCTCACTCTTCTGATCGCATA 59.683 47.826 0.00 0.00 0.00 3.14
126 157 2.100584 GGTCTCACTCTTCTGATCGCAT 59.899 50.000 0.00 0.00 0.00 4.73
127 158 1.474478 GGTCTCACTCTTCTGATCGCA 59.526 52.381 0.00 0.00 0.00 5.10
128 159 1.202359 GGGTCTCACTCTTCTGATCGC 60.202 57.143 0.00 0.00 0.00 4.58
129 160 2.374184 AGGGTCTCACTCTTCTGATCG 58.626 52.381 0.00 0.00 0.00 3.69
130 161 3.766591 TCAAGGGTCTCACTCTTCTGATC 59.233 47.826 0.00 0.00 36.63 2.92
131 162 3.784178 TCAAGGGTCTCACTCTTCTGAT 58.216 45.455 0.00 0.00 36.63 2.90
132 163 3.244887 TCAAGGGTCTCACTCTTCTGA 57.755 47.619 0.00 0.00 36.63 3.27
134 165 3.831911 CTCTTCAAGGGTCTCACTCTTCT 59.168 47.826 0.00 0.00 36.63 2.85
264 301 2.286950 TGCGAAAACATGTGCAGAGAAC 60.287 45.455 0.00 0.00 32.73 3.01
284 321 5.106948 CCAGTACATAATCGCCAAGCTATTG 60.107 44.000 0.00 0.00 36.09 1.90
367 408 0.378257 AATTACGCGGCATGCTCTTG 59.622 50.000 18.92 7.87 43.27 3.02
529 602 6.975197 CGGTAGCACATTATCCATGTATCTAG 59.025 42.308 0.00 0.00 45.06 2.43
669 746 6.146837 GTGATCATCAGCACATTGTAGGATAC 59.853 42.308 0.00 0.00 37.24 2.24
672 749 4.162888 AGTGATCATCAGCACATTGTAGGA 59.837 41.667 0.00 0.00 37.48 2.94
673 750 4.449131 AGTGATCATCAGCACATTGTAGG 58.551 43.478 0.00 0.00 37.48 3.18
674 751 5.816258 AGAAGTGATCATCAGCACATTGTAG 59.184 40.000 0.00 0.00 37.48 2.74
675 752 5.583457 CAGAAGTGATCATCAGCACATTGTA 59.417 40.000 0.00 0.00 37.48 2.41
810 1207 3.818787 CCCATGCTGGAACGCTGC 61.819 66.667 4.00 0.00 40.96 5.25
950 1364 2.490217 CCGCTACGGTGAGACTGG 59.510 66.667 0.00 0.00 42.73 4.00
1647 2061 8.749499 GCAAATTAGATGAATTATGCAACTGAC 58.251 33.333 0.00 0.00 39.17 3.51
1648 2062 8.689061 AGCAAATTAGATGAATTATGCAACTGA 58.311 29.630 0.00 0.00 40.37 3.41
1649 2063 8.867112 AGCAAATTAGATGAATTATGCAACTG 57.133 30.769 0.00 0.00 40.37 3.16
1650 2064 9.309516 CAAGCAAATTAGATGAATTATGCAACT 57.690 29.630 0.00 0.00 40.37 3.16
1651 2065 9.304731 TCAAGCAAATTAGATGAATTATGCAAC 57.695 29.630 0.00 0.00 40.37 4.17
1653 2067 8.468399 TGTCAAGCAAATTAGATGAATTATGCA 58.532 29.630 14.06 0.00 40.37 3.96
1654 2068 8.861033 TGTCAAGCAAATTAGATGAATTATGC 57.139 30.769 0.00 0.00 36.71 3.14
1657 2071 9.791820 CACATGTCAAGCAAATTAGATGAATTA 57.208 29.630 0.00 0.00 36.71 1.40
1658 2072 8.308931 ACACATGTCAAGCAAATTAGATGAATT 58.691 29.630 0.00 0.00 39.56 2.17
1659 2073 7.833786 ACACATGTCAAGCAAATTAGATGAAT 58.166 30.769 0.00 0.00 0.00 2.57
1660 2074 7.218228 ACACATGTCAAGCAAATTAGATGAA 57.782 32.000 0.00 0.00 0.00 2.57
1661 2075 6.822667 ACACATGTCAAGCAAATTAGATGA 57.177 33.333 0.00 0.00 0.00 2.92
1662 2076 7.085746 TGAACACATGTCAAGCAAATTAGATG 58.914 34.615 0.00 0.00 0.00 2.90
1663 2077 7.040201 ACTGAACACATGTCAAGCAAATTAGAT 60.040 33.333 0.00 0.00 0.00 1.98
1664 2078 6.262944 ACTGAACACATGTCAAGCAAATTAGA 59.737 34.615 0.00 0.00 0.00 2.10
1665 2079 6.441274 ACTGAACACATGTCAAGCAAATTAG 58.559 36.000 0.00 0.00 0.00 1.73
1666 2080 6.389830 ACTGAACACATGTCAAGCAAATTA 57.610 33.333 0.00 0.00 0.00 1.40
1667 2081 5.266733 ACTGAACACATGTCAAGCAAATT 57.733 34.783 0.00 0.00 0.00 1.82
1668 2082 4.924305 ACTGAACACATGTCAAGCAAAT 57.076 36.364 0.00 0.00 0.00 2.32
1669 2083 4.881273 AGTACTGAACACATGTCAAGCAAA 59.119 37.500 0.00 0.00 0.00 3.68
1670 2084 4.450976 AGTACTGAACACATGTCAAGCAA 58.549 39.130 0.00 0.00 0.00 3.91
1671 2085 4.058124 GAGTACTGAACACATGTCAAGCA 58.942 43.478 0.00 0.00 0.00 3.91
1672 2086 3.433615 GGAGTACTGAACACATGTCAAGC 59.566 47.826 0.00 0.00 0.00 4.01
1673 2087 3.675225 CGGAGTACTGAACACATGTCAAG 59.325 47.826 0.00 0.00 0.00 3.02
1674 2088 3.319689 TCGGAGTACTGAACACATGTCAA 59.680 43.478 0.00 0.00 0.00 3.18
1675 2089 2.888414 TCGGAGTACTGAACACATGTCA 59.112 45.455 0.00 0.00 0.00 3.58
1676 2090 3.570926 TCGGAGTACTGAACACATGTC 57.429 47.619 0.00 0.00 0.00 3.06
1677 2091 4.705507 ACTATCGGAGTACTGAACACATGT 59.294 41.667 0.00 0.00 36.27 3.21
1678 2092 5.037385 CACTATCGGAGTACTGAACACATG 58.963 45.833 0.00 0.00 35.64 3.21
1679 2093 4.705507 ACACTATCGGAGTACTGAACACAT 59.294 41.667 0.00 0.00 35.64 3.21
1680 2094 4.077108 ACACTATCGGAGTACTGAACACA 58.923 43.478 0.00 0.00 35.64 3.72
1681 2095 4.082895 ACACACTATCGGAGTACTGAACAC 60.083 45.833 0.00 0.00 35.64 3.32
1682 2096 4.077108 ACACACTATCGGAGTACTGAACA 58.923 43.478 0.00 0.00 35.64 3.18
1683 2097 4.155462 TGACACACTATCGGAGTACTGAAC 59.845 45.833 0.00 0.00 35.64 3.18
1684 2098 4.155462 GTGACACACTATCGGAGTACTGAA 59.845 45.833 0.00 0.00 35.64 3.02
1685 2099 3.688185 GTGACACACTATCGGAGTACTGA 59.312 47.826 0.00 0.00 35.64 3.41
1686 2100 3.439129 TGTGACACACTATCGGAGTACTG 59.561 47.826 3.56 0.00 35.64 2.74
1687 2101 3.682696 TGTGACACACTATCGGAGTACT 58.317 45.455 3.56 0.00 35.64 2.73
1688 2102 4.634184 ATGTGACACACTATCGGAGTAC 57.366 45.455 11.22 0.00 35.64 2.73
1689 2103 7.718314 ACTTATATGTGACACACTATCGGAGTA 59.282 37.037 11.22 0.00 35.64 2.59
1690 2104 6.546403 ACTTATATGTGACACACTATCGGAGT 59.454 38.462 11.22 11.08 39.82 3.85
1691 2105 6.971602 ACTTATATGTGACACACTATCGGAG 58.028 40.000 11.22 10.60 35.11 4.63
1692 2106 6.954487 ACTTATATGTGACACACTATCGGA 57.046 37.500 11.22 1.20 35.11 4.55
1693 2107 7.326305 GCTTACTTATATGTGACACACTATCGG 59.674 40.741 11.22 8.69 35.11 4.18
1694 2108 8.076781 AGCTTACTTATATGTGACACACTATCG 58.923 37.037 11.22 2.63 35.11 2.92
1695 2109 9.186323 CAGCTTACTTATATGTGACACACTATC 57.814 37.037 11.22 0.00 35.11 2.08
1696 2110 8.914011 TCAGCTTACTTATATGTGACACACTAT 58.086 33.333 11.22 11.91 35.11 2.12
1697 2111 8.188799 GTCAGCTTACTTATATGTGACACACTA 58.811 37.037 11.22 3.01 35.11 2.74
1698 2112 7.036220 GTCAGCTTACTTATATGTGACACACT 58.964 38.462 11.22 4.05 35.11 3.55
1699 2113 7.009631 CAGTCAGCTTACTTATATGTGACACAC 59.990 40.741 11.22 1.42 36.19 3.82
1700 2114 7.035612 CAGTCAGCTTACTTATATGTGACACA 58.964 38.462 11.41 11.41 36.19 3.72
1701 2115 7.036220 ACAGTCAGCTTACTTATATGTGACAC 58.964 38.462 0.00 0.00 36.19 3.67
1702 2116 7.170393 ACAGTCAGCTTACTTATATGTGACA 57.830 36.000 0.00 0.00 36.19 3.58
1703 2117 9.582431 TTAACAGTCAGCTTACTTATATGTGAC 57.418 33.333 0.00 0.00 34.36 3.67
1704 2118 9.582431 GTTAACAGTCAGCTTACTTATATGTGA 57.418 33.333 0.00 0.00 0.00 3.58
1705 2119 8.818057 GGTTAACAGTCAGCTTACTTATATGTG 58.182 37.037 8.10 0.00 0.00 3.21
1706 2120 7.705325 CGGTTAACAGTCAGCTTACTTATATGT 59.295 37.037 8.10 0.00 0.00 2.29
1707 2121 7.919091 TCGGTTAACAGTCAGCTTACTTATATG 59.081 37.037 8.10 0.00 0.00 1.78
1708 2122 8.004087 TCGGTTAACAGTCAGCTTACTTATAT 57.996 34.615 8.10 0.00 0.00 0.86
1709 2123 7.395190 TCGGTTAACAGTCAGCTTACTTATA 57.605 36.000 8.10 0.00 0.00 0.98
1710 2124 6.276832 TCGGTTAACAGTCAGCTTACTTAT 57.723 37.500 8.10 0.00 0.00 1.73
1711 2125 5.710513 TCGGTTAACAGTCAGCTTACTTA 57.289 39.130 8.10 0.00 0.00 2.24
1712 2126 4.595762 TCGGTTAACAGTCAGCTTACTT 57.404 40.909 8.10 0.00 0.00 2.24
1713 2127 4.803098 ATCGGTTAACAGTCAGCTTACT 57.197 40.909 8.10 0.00 0.00 2.24
1714 2128 5.407387 TGAAATCGGTTAACAGTCAGCTTAC 59.593 40.000 8.10 0.00 0.00 2.34
1715 2129 5.543714 TGAAATCGGTTAACAGTCAGCTTA 58.456 37.500 8.10 0.00 0.00 3.09
1716 2130 4.385825 TGAAATCGGTTAACAGTCAGCTT 58.614 39.130 8.10 0.00 0.00 3.74
1717 2131 4.002906 TGAAATCGGTTAACAGTCAGCT 57.997 40.909 8.10 0.00 0.00 4.24
1718 2132 4.742438 TTGAAATCGGTTAACAGTCAGC 57.258 40.909 8.10 0.00 0.00 4.26
1719 2133 9.490663 GATAATTTGAAATCGGTTAACAGTCAG 57.509 33.333 8.10 0.00 0.00 3.51
1720 2134 9.226606 AGATAATTTGAAATCGGTTAACAGTCA 57.773 29.630 8.10 0.84 0.00 3.41
1721 2135 9.704098 GAGATAATTTGAAATCGGTTAACAGTC 57.296 33.333 8.10 0.00 0.00 3.51
1722 2136 9.449719 AGAGATAATTTGAAATCGGTTAACAGT 57.550 29.630 8.10 0.00 0.00 3.55
1728 2142 8.709646 GCGTATAGAGATAATTTGAAATCGGTT 58.290 33.333 0.00 0.00 0.00 4.44
1729 2143 7.870954 TGCGTATAGAGATAATTTGAAATCGGT 59.129 33.333 0.00 0.00 0.00 4.69
1730 2144 8.239681 TGCGTATAGAGATAATTTGAAATCGG 57.760 34.615 0.00 0.00 0.00 4.18
1736 2150 9.154847 CCATGAATGCGTATAGAGATAATTTGA 57.845 33.333 0.00 0.00 0.00 2.69
1737 2151 8.939929 ACCATGAATGCGTATAGAGATAATTTG 58.060 33.333 0.00 0.00 0.00 2.32
1740 2154 9.755804 CATACCATGAATGCGTATAGAGATAAT 57.244 33.333 0.00 0.00 0.00 1.28
1741 2155 8.749354 ACATACCATGAATGCGTATAGAGATAA 58.251 33.333 0.00 0.00 0.00 1.75
1742 2156 8.293699 ACATACCATGAATGCGTATAGAGATA 57.706 34.615 0.00 0.00 0.00 1.98
1743 2157 7.175347 ACATACCATGAATGCGTATAGAGAT 57.825 36.000 0.00 0.00 0.00 2.75
1744 2158 6.590234 ACATACCATGAATGCGTATAGAGA 57.410 37.500 0.00 0.00 0.00 3.10
1745 2159 8.932945 AATACATACCATGAATGCGTATAGAG 57.067 34.615 0.00 0.00 0.00 2.43
1749 2163 9.109393 GGAATAATACATACCATGAATGCGTAT 57.891 33.333 0.00 0.00 0.00 3.06
1750 2164 8.097662 TGGAATAATACATACCATGAATGCGTA 58.902 33.333 0.00 0.00 0.00 4.42
1751 2165 6.939730 TGGAATAATACATACCATGAATGCGT 59.060 34.615 0.00 0.00 0.00 5.24
1752 2166 7.376435 TGGAATAATACATACCATGAATGCG 57.624 36.000 0.00 0.00 0.00 4.73
1783 2197 5.561679 AGAGAGAAAAGTGGTTAATGGGAC 58.438 41.667 0.00 0.00 0.00 4.46
1784 2198 5.280521 GGAGAGAGAAAAGTGGTTAATGGGA 60.281 44.000 0.00 0.00 0.00 4.37
1785 2199 4.944317 GGAGAGAGAAAAGTGGTTAATGGG 59.056 45.833 0.00 0.00 0.00 4.00
1786 2200 5.645497 CAGGAGAGAGAAAAGTGGTTAATGG 59.355 44.000 0.00 0.00 0.00 3.16
1787 2201 6.370166 GTCAGGAGAGAGAAAAGTGGTTAATG 59.630 42.308 0.00 0.00 0.00 1.90
1788 2202 6.043243 TGTCAGGAGAGAGAAAAGTGGTTAAT 59.957 38.462 0.00 0.00 0.00 1.40
1789 2203 5.365605 TGTCAGGAGAGAGAAAAGTGGTTAA 59.634 40.000 0.00 0.00 0.00 2.01
1790 2204 4.899457 TGTCAGGAGAGAGAAAAGTGGTTA 59.101 41.667 0.00 0.00 0.00 2.85
1791 2205 3.711704 TGTCAGGAGAGAGAAAAGTGGTT 59.288 43.478 0.00 0.00 0.00 3.67
1792 2206 3.309296 TGTCAGGAGAGAGAAAAGTGGT 58.691 45.455 0.00 0.00 0.00 4.16
1793 2207 4.252073 CATGTCAGGAGAGAGAAAAGTGG 58.748 47.826 0.00 0.00 0.00 4.00
1794 2208 4.892433 ACATGTCAGGAGAGAGAAAAGTG 58.108 43.478 0.00 0.00 0.00 3.16
1795 2209 4.590647 TGACATGTCAGGAGAGAGAAAAGT 59.409 41.667 24.56 0.00 34.14 2.66
1796 2210 5.144692 TGACATGTCAGGAGAGAGAAAAG 57.855 43.478 24.56 0.00 34.14 2.27
1797 2211 5.545588 CTTGACATGTCAGGAGAGAGAAAA 58.454 41.667 28.78 9.78 41.13 2.29
1798 2212 4.562347 GCTTGACATGTCAGGAGAGAGAAA 60.562 45.833 34.61 14.30 41.13 2.52
1799 2213 3.056250 GCTTGACATGTCAGGAGAGAGAA 60.056 47.826 34.61 14.97 41.13 2.87
1800 2214 2.495270 GCTTGACATGTCAGGAGAGAGA 59.505 50.000 34.61 15.63 41.13 3.10
1801 2215 2.418471 GGCTTGACATGTCAGGAGAGAG 60.418 54.545 34.61 24.84 41.13 3.20
1802 2216 1.552337 GGCTTGACATGTCAGGAGAGA 59.448 52.381 34.61 16.97 41.13 3.10
1803 2217 1.406614 GGGCTTGACATGTCAGGAGAG 60.407 57.143 34.61 25.78 41.13 3.20
1804 2218 0.615331 GGGCTTGACATGTCAGGAGA 59.385 55.000 34.61 17.98 41.13 3.71
1805 2219 0.325933 TGGGCTTGACATGTCAGGAG 59.674 55.000 34.61 26.72 41.13 3.69
1806 2220 0.036732 GTGGGCTTGACATGTCAGGA 59.963 55.000 34.61 18.99 41.13 3.86
1807 2221 1.300971 CGTGGGCTTGACATGTCAGG 61.301 60.000 28.44 28.44 41.13 3.86
1808 2222 1.300971 CCGTGGGCTTGACATGTCAG 61.301 60.000 26.48 20.75 41.13 3.51
1809 2223 1.302431 CCGTGGGCTTGACATGTCA 60.302 57.895 24.56 24.56 37.91 3.58
1810 2224 0.889186 AACCGTGGGCTTGACATGTC 60.889 55.000 19.27 19.27 0.00 3.06
1811 2225 0.398696 TAACCGTGGGCTTGACATGT 59.601 50.000 0.00 0.00 0.00 3.21
1812 2226 1.086696 CTAACCGTGGGCTTGACATG 58.913 55.000 0.00 0.00 0.00 3.21
1813 2227 0.981183 TCTAACCGTGGGCTTGACAT 59.019 50.000 0.00 0.00 0.00 3.06
1814 2228 0.034337 GTCTAACCGTGGGCTTGACA 59.966 55.000 0.00 0.00 0.00 3.58
1815 2229 0.320697 AGTCTAACCGTGGGCTTGAC 59.679 55.000 0.00 0.00 0.00 3.18
1816 2230 0.606604 GAGTCTAACCGTGGGCTTGA 59.393 55.000 0.00 0.00 0.00 3.02
1817 2231 0.736325 CGAGTCTAACCGTGGGCTTG 60.736 60.000 0.00 0.00 0.00 4.01
1818 2232 1.590147 CGAGTCTAACCGTGGGCTT 59.410 57.895 0.00 0.00 0.00 4.35
1819 2233 2.348888 CCGAGTCTAACCGTGGGCT 61.349 63.158 0.00 0.00 0.00 5.19
1820 2234 2.183555 CCGAGTCTAACCGTGGGC 59.816 66.667 0.00 0.00 0.00 5.36
1821 2235 1.664321 CCTCCGAGTCTAACCGTGGG 61.664 65.000 0.00 0.00 0.00 4.61
1822 2236 1.807886 CCTCCGAGTCTAACCGTGG 59.192 63.158 0.00 0.00 0.00 4.94
1823 2237 1.139095 GCCTCCGAGTCTAACCGTG 59.861 63.158 0.00 0.00 0.00 4.94
1824 2238 2.050934 GGCCTCCGAGTCTAACCGT 61.051 63.158 0.00 0.00 0.00 4.83
1825 2239 2.050350 TGGCCTCCGAGTCTAACCG 61.050 63.158 3.32 0.00 0.00 4.44
1826 2240 1.516423 GTGGCCTCCGAGTCTAACC 59.484 63.158 3.32 0.00 0.00 2.85
1827 2241 1.139095 CGTGGCCTCCGAGTCTAAC 59.861 63.158 3.32 0.00 0.00 2.34
1828 2242 0.035152 TACGTGGCCTCCGAGTCTAA 60.035 55.000 19.96 0.00 0.00 2.10
1829 2243 0.035152 TTACGTGGCCTCCGAGTCTA 60.035 55.000 19.96 1.72 0.00 2.59
1830 2244 1.303888 TTACGTGGCCTCCGAGTCT 60.304 57.895 19.96 2.60 0.00 3.24
1831 2245 1.153881 GTTACGTGGCCTCCGAGTC 60.154 63.158 19.96 7.31 0.00 3.36
1832 2246 1.183676 AAGTTACGTGGCCTCCGAGT 61.184 55.000 19.96 5.83 0.00 4.18
1833 2247 0.813184 TAAGTTACGTGGCCTCCGAG 59.187 55.000 19.96 0.00 0.00 4.63
1834 2248 1.477553 ATAAGTTACGTGGCCTCCGA 58.522 50.000 19.96 3.57 0.00 4.55
1835 2249 3.655276 ATATAAGTTACGTGGCCTCCG 57.345 47.619 3.32 9.27 0.00 4.63
1836 2250 4.062991 CCAATATAAGTTACGTGGCCTCC 58.937 47.826 3.32 0.00 0.00 4.30
1837 2251 4.952460 TCCAATATAAGTTACGTGGCCTC 58.048 43.478 3.32 0.00 0.00 4.70
1838 2252 5.362105 TTCCAATATAAGTTACGTGGCCT 57.638 39.130 3.32 0.00 0.00 5.19
1839 2253 6.439675 TTTTCCAATATAAGTTACGTGGCC 57.560 37.500 0.00 0.00 0.00 5.36
1895 2309 9.927081 AGTTTGGAGATAAAATTGGTGAGATAT 57.073 29.630 0.00 0.00 0.00 1.63
1896 2310 9.753674 AAGTTTGGAGATAAAATTGGTGAGATA 57.246 29.630 0.00 0.00 0.00 1.98
1897 2311 8.655935 AAGTTTGGAGATAAAATTGGTGAGAT 57.344 30.769 0.00 0.00 0.00 2.75
1898 2312 8.477419 AAAGTTTGGAGATAAAATTGGTGAGA 57.523 30.769 0.00 0.00 29.49 3.27
1899 2313 9.196552 GAAAAGTTTGGAGATAAAATTGGTGAG 57.803 33.333 0.00 0.00 29.49 3.51
1900 2314 8.923270 AGAAAAGTTTGGAGATAAAATTGGTGA 58.077 29.630 0.00 0.00 29.49 4.02
1901 2315 8.981647 CAGAAAAGTTTGGAGATAAAATTGGTG 58.018 33.333 0.00 0.00 29.49 4.17
1902 2316 8.704668 ACAGAAAAGTTTGGAGATAAAATTGGT 58.295 29.630 0.00 0.00 29.49 3.67
1906 2320 9.914131 GCTTACAGAAAAGTTTGGAGATAAAAT 57.086 29.630 0.00 0.00 0.00 1.82
1907 2321 8.908903 TGCTTACAGAAAAGTTTGGAGATAAAA 58.091 29.630 0.00 0.00 0.00 1.52
1908 2322 8.458573 TGCTTACAGAAAAGTTTGGAGATAAA 57.541 30.769 0.00 0.00 0.00 1.40
1909 2323 8.635765 ATGCTTACAGAAAAGTTTGGAGATAA 57.364 30.769 0.00 0.00 0.00 1.75
1910 2324 9.733556 TTATGCTTACAGAAAAGTTTGGAGATA 57.266 29.630 0.00 0.00 0.00 1.98
1911 2325 8.635765 TTATGCTTACAGAAAAGTTTGGAGAT 57.364 30.769 0.00 0.00 0.00 2.75
1912 2326 8.514594 CATTATGCTTACAGAAAAGTTTGGAGA 58.485 33.333 0.00 0.00 29.31 3.71
1913 2327 8.299570 ACATTATGCTTACAGAAAAGTTTGGAG 58.700 33.333 0.00 0.00 29.31 3.86
1914 2328 8.177119 ACATTATGCTTACAGAAAAGTTTGGA 57.823 30.769 0.00 0.00 29.31 3.53
1915 2329 9.906660 TTACATTATGCTTACAGAAAAGTTTGG 57.093 29.630 0.00 0.00 29.31 3.28
1919 2333 9.893305 GTGTTTACATTATGCTTACAGAAAAGT 57.107 29.630 0.00 0.00 29.31 2.66
1920 2334 9.891828 TGTGTTTACATTATGCTTACAGAAAAG 57.108 29.630 0.00 0.00 29.31 2.27
1924 2338 9.884636 AGTATGTGTTTACATTATGCTTACAGA 57.115 29.630 0.00 0.00 45.01 3.41
1969 2383 9.638239 GATGTGCCTTATTTAGAATGAAAACAA 57.362 29.630 0.00 0.00 0.00 2.83
1970 2384 9.023962 AGATGTGCCTTATTTAGAATGAAAACA 57.976 29.630 0.00 0.00 0.00 2.83
1971 2385 9.508567 GAGATGTGCCTTATTTAGAATGAAAAC 57.491 33.333 0.00 0.00 0.00 2.43
1972 2386 9.241919 TGAGATGTGCCTTATTTAGAATGAAAA 57.758 29.630 0.00 0.00 0.00 2.29
1973 2387 8.806429 TGAGATGTGCCTTATTTAGAATGAAA 57.194 30.769 0.00 0.00 0.00 2.69
1974 2388 7.500227 CCTGAGATGTGCCTTATTTAGAATGAA 59.500 37.037 0.00 0.00 0.00 2.57
1975 2389 6.994496 CCTGAGATGTGCCTTATTTAGAATGA 59.006 38.462 0.00 0.00 0.00 2.57
1976 2390 6.206243 CCCTGAGATGTGCCTTATTTAGAATG 59.794 42.308 0.00 0.00 0.00 2.67
1977 2391 6.302269 CCCTGAGATGTGCCTTATTTAGAAT 58.698 40.000 0.00 0.00 0.00 2.40
1978 2392 5.397899 CCCCTGAGATGTGCCTTATTTAGAA 60.398 44.000 0.00 0.00 0.00 2.10
1979 2393 4.103153 CCCCTGAGATGTGCCTTATTTAGA 59.897 45.833 0.00 0.00 0.00 2.10
1980 2394 4.141390 ACCCCTGAGATGTGCCTTATTTAG 60.141 45.833 0.00 0.00 0.00 1.85
1981 2395 3.785887 ACCCCTGAGATGTGCCTTATTTA 59.214 43.478 0.00 0.00 0.00 1.40
1982 2396 2.582636 ACCCCTGAGATGTGCCTTATTT 59.417 45.455 0.00 0.00 0.00 1.40
1983 2397 2.208872 ACCCCTGAGATGTGCCTTATT 58.791 47.619 0.00 0.00 0.00 1.40
1984 2398 1.898863 ACCCCTGAGATGTGCCTTAT 58.101 50.000 0.00 0.00 0.00 1.73
1985 2399 2.561209 TACCCCTGAGATGTGCCTTA 57.439 50.000 0.00 0.00 0.00 2.69
1986 2400 1.561542 CTTACCCCTGAGATGTGCCTT 59.438 52.381 0.00 0.00 0.00 4.35
1987 2401 1.207791 CTTACCCCTGAGATGTGCCT 58.792 55.000 0.00 0.00 0.00 4.75
1988 2402 1.204146 TCTTACCCCTGAGATGTGCC 58.796 55.000 0.00 0.00 0.00 5.01
1989 2403 3.055094 TCTTTCTTACCCCTGAGATGTGC 60.055 47.826 0.00 0.00 0.00 4.57
1990 2404 4.826274 TCTTTCTTACCCCTGAGATGTG 57.174 45.455 0.00 0.00 0.00 3.21
1991 2405 4.164988 CCATCTTTCTTACCCCTGAGATGT 59.835 45.833 9.49 0.00 39.04 3.06
1992 2406 4.410228 TCCATCTTTCTTACCCCTGAGATG 59.590 45.833 0.00 0.00 39.90 2.90
1993 2407 4.635473 TCCATCTTTCTTACCCCTGAGAT 58.365 43.478 0.00 0.00 0.00 2.75
1994 2408 4.074799 TCCATCTTTCTTACCCCTGAGA 57.925 45.455 0.00 0.00 0.00 3.27
1995 2409 6.500589 TTATCCATCTTTCTTACCCCTGAG 57.499 41.667 0.00 0.00 0.00 3.35
1996 2410 6.901615 TTTATCCATCTTTCTTACCCCTGA 57.098 37.500 0.00 0.00 0.00 3.86
1997 2411 8.001292 AGAATTTATCCATCTTTCTTACCCCTG 58.999 37.037 0.00 0.00 0.00 4.45
1998 2412 8.119062 AGAATTTATCCATCTTTCTTACCCCT 57.881 34.615 0.00 0.00 0.00 4.79
1999 2413 9.862149 TTAGAATTTATCCATCTTTCTTACCCC 57.138 33.333 0.00 0.00 0.00 4.95
2019 2433 9.807649 GTGCCAATGAATACTCAATTTTAGAAT 57.192 29.630 0.00 0.00 34.49 2.40
2020 2434 9.023962 AGTGCCAATGAATACTCAATTTTAGAA 57.976 29.630 0.00 0.00 34.49 2.10
2021 2435 8.579850 AGTGCCAATGAATACTCAATTTTAGA 57.420 30.769 0.00 0.00 34.49 2.10
2022 2436 9.643693 AAAGTGCCAATGAATACTCAATTTTAG 57.356 29.630 0.00 0.00 34.49 1.85
2023 2437 9.421806 CAAAGTGCCAATGAATACTCAATTTTA 57.578 29.630 0.00 0.00 34.49 1.52
2024 2438 8.149647 TCAAAGTGCCAATGAATACTCAATTTT 58.850 29.630 0.00 0.00 34.49 1.82
2025 2439 7.669427 TCAAAGTGCCAATGAATACTCAATTT 58.331 30.769 0.00 0.00 34.49 1.82
2026 2440 7.230849 TCAAAGTGCCAATGAATACTCAATT 57.769 32.000 0.00 0.00 34.49 2.32
2027 2441 6.839124 TCAAAGTGCCAATGAATACTCAAT 57.161 33.333 0.00 0.00 34.49 2.57
2028 2442 6.623486 CATCAAAGTGCCAATGAATACTCAA 58.377 36.000 0.00 0.00 34.49 3.02
2029 2443 5.393352 GCATCAAAGTGCCAATGAATACTCA 60.393 40.000 0.00 0.00 39.18 3.41
2030 2444 5.039333 GCATCAAAGTGCCAATGAATACTC 58.961 41.667 0.00 0.00 39.18 2.59
2031 2445 5.002464 GCATCAAAGTGCCAATGAATACT 57.998 39.130 0.00 0.00 39.18 2.12
2042 2456 1.210155 GTGGACGGCATCAAAGTGC 59.790 57.895 0.00 0.00 44.31 4.40
2043 2457 1.586154 GGGTGGACGGCATCAAAGTG 61.586 60.000 0.00 0.00 0.00 3.16
2044 2458 1.303317 GGGTGGACGGCATCAAAGT 60.303 57.895 0.00 0.00 0.00 2.66
2045 2459 2.046285 GGGGTGGACGGCATCAAAG 61.046 63.158 0.00 0.00 0.00 2.77
2046 2460 2.034999 GGGGTGGACGGCATCAAA 59.965 61.111 0.00 0.00 0.00 2.69
2047 2461 4.402528 CGGGGTGGACGGCATCAA 62.403 66.667 0.00 0.00 0.00 2.57
2053 2467 3.834799 GTAGAGCGGGGTGGACGG 61.835 72.222 0.00 0.00 0.00 4.79
2054 2468 3.066190 TGTAGAGCGGGGTGGACG 61.066 66.667 0.00 0.00 0.00 4.79
2055 2469 1.982938 AGTGTAGAGCGGGGTGGAC 60.983 63.158 0.00 0.00 0.00 4.02
2056 2470 1.982395 CAGTGTAGAGCGGGGTGGA 60.982 63.158 0.00 0.00 0.00 4.02
2057 2471 2.227089 GACAGTGTAGAGCGGGGTGG 62.227 65.000 0.00 0.00 0.00 4.61
2058 2472 1.215647 GACAGTGTAGAGCGGGGTG 59.784 63.158 0.00 0.00 0.00 4.61
2059 2473 0.330604 TAGACAGTGTAGAGCGGGGT 59.669 55.000 0.00 0.00 0.00 4.95
2060 2474 0.739561 GTAGACAGTGTAGAGCGGGG 59.260 60.000 0.00 0.00 0.00 5.73
2061 2475 0.377554 CGTAGACAGTGTAGAGCGGG 59.622 60.000 0.00 0.00 0.00 6.13
2062 2476 0.248134 GCGTAGACAGTGTAGAGCGG 60.248 60.000 0.00 0.00 0.00 5.52
2063 2477 0.248134 GGCGTAGACAGTGTAGAGCG 60.248 60.000 0.00 0.07 31.66 5.03
2064 2478 0.248134 CGGCGTAGACAGTGTAGAGC 60.248 60.000 0.00 0.00 27.25 4.09
2065 2479 0.248134 GCGGCGTAGACAGTGTAGAG 60.248 60.000 9.37 0.00 27.25 2.43
2066 2480 1.651240 GGCGGCGTAGACAGTGTAGA 61.651 60.000 9.37 0.00 27.25 2.59
2067 2481 1.226603 GGCGGCGTAGACAGTGTAG 60.227 63.158 9.37 0.00 27.25 2.74
2068 2482 1.972752 TGGCGGCGTAGACAGTGTA 60.973 57.895 9.37 0.00 27.25 2.90
2069 2483 3.299977 TGGCGGCGTAGACAGTGT 61.300 61.111 9.37 0.00 27.25 3.55
2070 2484 2.809601 GTGGCGGCGTAGACAGTG 60.810 66.667 9.37 0.00 27.25 3.66
2071 2485 4.065281 GGTGGCGGCGTAGACAGT 62.065 66.667 9.37 0.00 27.25 3.55
2072 2486 3.583276 TTGGTGGCGGCGTAGACAG 62.583 63.158 9.37 0.00 27.25 3.51
2073 2487 3.583276 CTTGGTGGCGGCGTAGACA 62.583 63.158 9.37 0.05 27.25 3.41
2074 2488 2.813908 CTTGGTGGCGGCGTAGAC 60.814 66.667 9.37 2.44 0.00 2.59
2075 2489 4.077184 CCTTGGTGGCGGCGTAGA 62.077 66.667 9.37 0.00 0.00 2.59
2084 2498 1.375523 GGTACTCACGCCTTGGTGG 60.376 63.158 5.16 0.00 38.46 4.61
2085 2499 1.736645 CGGTACTCACGCCTTGGTG 60.737 63.158 0.00 0.00 39.29 4.17
2086 2500 2.654877 CGGTACTCACGCCTTGGT 59.345 61.111 0.00 0.00 0.00 3.67
2093 2507 4.849329 GGCCGAGCGGTACTCACG 62.849 72.222 10.94 0.00 46.63 4.35
2094 2508 4.509737 GGGCCGAGCGGTACTCAC 62.510 72.222 10.94 0.00 46.63 3.51
2095 2509 4.753662 AGGGCCGAGCGGTACTCA 62.754 66.667 10.94 0.00 46.63 3.41
2096 2510 4.208686 CAGGGCCGAGCGGTACTC 62.209 72.222 10.94 0.00 42.47 2.59
2098 2512 4.509737 GACAGGGCCGAGCGGTAC 62.510 72.222 10.94 4.15 37.65 3.34
2103 2517 3.254024 TTCAAGGACAGGGCCGAGC 62.254 63.158 0.00 0.00 0.00 5.03
2104 2518 1.376037 GTTCAAGGACAGGGCCGAG 60.376 63.158 0.00 0.00 0.00 4.63
2105 2519 2.747686 GTTCAAGGACAGGGCCGA 59.252 61.111 0.00 0.00 0.00 5.54
2106 2520 2.359975 GGTTCAAGGACAGGGCCG 60.360 66.667 0.00 0.00 0.00 6.13
2107 2521 1.603739 GTGGTTCAAGGACAGGGCC 60.604 63.158 0.00 0.00 0.00 5.80
2108 2522 0.178990 AAGTGGTTCAAGGACAGGGC 60.179 55.000 0.00 0.00 0.00 5.19
2109 2523 1.421646 AGAAGTGGTTCAAGGACAGGG 59.578 52.381 0.00 0.00 34.82 4.45
2110 2524 2.104792 TCAGAAGTGGTTCAAGGACAGG 59.895 50.000 0.00 0.00 34.82 4.00
2111 2525 3.475566 TCAGAAGTGGTTCAAGGACAG 57.524 47.619 0.00 0.00 34.82 3.51
2112 2526 3.199946 ACTTCAGAAGTGGTTCAAGGACA 59.800 43.478 15.41 0.00 41.01 4.02
2113 2527 3.809905 ACTTCAGAAGTGGTTCAAGGAC 58.190 45.455 15.41 0.00 41.01 3.85
2114 2528 4.503714 AACTTCAGAAGTGGTTCAAGGA 57.496 40.909 16.85 0.00 41.91 3.36
2115 2529 5.368989 ACTAACTTCAGAAGTGGTTCAAGG 58.631 41.667 16.85 4.16 41.91 3.61
2227 2646 9.667107 TCTTAACGGACTTCATAATCAAGATTT 57.333 29.630 0.02 0.00 32.50 2.17
2230 2649 7.123697 TCCTCTTAACGGACTTCATAATCAAGA 59.876 37.037 0.00 0.00 0.00 3.02
2400 2837 6.430000 AGTTAACACTTGGCTTACTTATGTGG 59.570 38.462 8.61 0.00 0.00 4.17
2588 3105 7.230747 TGGAGATAAAATTGGTGAGACAGAAA 58.769 34.615 0.00 0.00 0.00 2.52
2593 3110 6.434340 AGGTTTGGAGATAAAATTGGTGAGAC 59.566 38.462 0.00 0.00 0.00 3.36
2691 3623 3.270877 CATCGAAGTTTCTTACCCCAGG 58.729 50.000 0.00 0.00 0.00 4.45
2693 3625 2.617021 GCCATCGAAGTTTCTTACCCCA 60.617 50.000 0.00 0.00 0.00 4.96
2713 3680 2.648059 ACTCATTACTGGCCTCATTGC 58.352 47.619 3.32 0.00 0.00 3.56
2835 3815 6.817765 AATCGTTTTGGTATCACTGTGAAT 57.182 33.333 15.31 6.31 0.00 2.57
2950 3934 8.824756 TGTATAATCTAGAGAAACCAGTGACT 57.175 34.615 0.00 0.00 0.00 3.41
3053 4151 5.585047 GGTTATGTAACTTTCTTCCGAGCAT 59.415 40.000 3.22 0.00 36.47 3.79
3084 4182 4.153117 CAGAAAACACTATCACTGTGCCTC 59.847 45.833 2.12 0.00 38.86 4.70
3157 4256 3.889815 TCAGCATACCTGAGAAATTGGG 58.110 45.455 0.00 0.00 45.44 4.12
3245 4344 7.174253 CCTCTACAAGAGTGATTAGCTAGTAGG 59.826 44.444 9.73 0.00 40.72 3.18
3246 4345 7.174253 CCCTCTACAAGAGTGATTAGCTAGTAG 59.826 44.444 3.42 0.00 40.72 2.57
3280 4533 7.302524 TGCAAAATAACGGAGATAACAGAAAC 58.697 34.615 0.00 0.00 0.00 2.78
3285 4538 6.372937 TGACATGCAAAATAACGGAGATAACA 59.627 34.615 0.00 0.00 0.00 2.41
3398 4706 1.246737 GGAGGGCCAGCAAAGACTTG 61.247 60.000 6.18 0.00 35.49 3.16
3449 4806 7.450634 AGGTCTACAACTATGTGAACTAACTCA 59.549 37.037 0.00 0.00 40.84 3.41
3520 4889 6.954944 TGATTTCGGTTTCTTGTTGAACTAG 58.045 36.000 0.23 0.23 33.88 2.57
3659 5050 9.409312 GATGATCTGACACTGATAAGTTCATAG 57.591 37.037 0.00 0.00 32.11 2.23
3664 5055 5.127845 ACGGATGATCTGACACTGATAAGTT 59.872 40.000 8.51 0.00 0.00 2.66
3680 5071 6.118170 AGATTCATTCAGTTTGACGGATGAT 58.882 36.000 0.00 0.00 0.00 2.45
4009 5420 3.272574 TCATCTGAGTCCATCTTTGCC 57.727 47.619 0.00 0.00 0.00 4.52
4034 5445 7.391554 ACATGAAGCTGTAGAATTAACACACAT 59.608 33.333 0.00 0.00 0.00 3.21
4036 5447 7.133891 ACATGAAGCTGTAGAATTAACACAC 57.866 36.000 0.00 0.00 0.00 3.82
4066 5477 8.203485 TCATGAAGGCTGTAGATTTTTGTTTTT 58.797 29.630 0.00 0.00 0.00 1.94
4067 5478 7.653311 GTCATGAAGGCTGTAGATTTTTGTTTT 59.347 33.333 0.00 0.00 0.00 2.43
4068 5479 7.147976 GTCATGAAGGCTGTAGATTTTTGTTT 58.852 34.615 0.00 0.00 0.00 2.83
4069 5480 6.294731 GGTCATGAAGGCTGTAGATTTTTGTT 60.295 38.462 0.00 0.00 0.00 2.83
4070 5481 5.183904 GGTCATGAAGGCTGTAGATTTTTGT 59.816 40.000 0.00 0.00 0.00 2.83
4071 5482 5.183713 TGGTCATGAAGGCTGTAGATTTTTG 59.816 40.000 0.00 0.00 0.00 2.44
4072 5483 5.324409 TGGTCATGAAGGCTGTAGATTTTT 58.676 37.500 0.00 0.00 0.00 1.94
4073 5484 4.922206 TGGTCATGAAGGCTGTAGATTTT 58.078 39.130 0.00 0.00 0.00 1.82
4074 5485 4.574674 TGGTCATGAAGGCTGTAGATTT 57.425 40.909 0.00 0.00 0.00 2.17
4075 5486 4.574674 TTGGTCATGAAGGCTGTAGATT 57.425 40.909 0.00 0.00 0.00 2.40
4076 5487 4.785346 ATTGGTCATGAAGGCTGTAGAT 57.215 40.909 0.00 0.00 0.00 1.98
4124 5535 0.846870 CTTGGAAGGGGAAGGGAGGT 60.847 60.000 0.00 0.00 0.00 3.85
4184 5603 1.474498 GGCCCGTTGGTAAGACATAGG 60.474 57.143 0.00 0.00 0.00 2.57
4186 5605 1.277579 TGGCCCGTTGGTAAGACATA 58.722 50.000 0.00 0.00 0.00 2.29
4193 5612 0.250814 ACGATTTTGGCCCGTTGGTA 60.251 50.000 0.00 0.00 32.03 3.25
4293 5713 0.537371 GGGCAGCCAGTGTTGTTAGT 60.537 55.000 15.19 0.00 0.00 2.24
4315 5735 3.439440 GGAGGCACCTGGACTTTTT 57.561 52.632 0.00 0.00 31.94 1.94
4327 5747 4.141251 GGGATAAAGTTATGGAAGGAGGCA 60.141 45.833 0.00 0.00 0.00 4.75
4340 5760 4.200092 GCCTTCGAGATTGGGATAAAGTT 58.800 43.478 0.00 0.00 0.00 2.66
4357 5777 3.434299 CACCATGCAATTTTCTTGCCTTC 59.566 43.478 7.42 0.00 44.32 3.46
4408 5832 4.100707 TCTACGTTTCCCAACACTATCG 57.899 45.455 0.00 0.00 32.54 2.92
4411 5835 5.217978 ACATTCTACGTTTCCCAACACTA 57.782 39.130 0.00 0.00 32.54 2.74
4450 5874 5.244785 AGATAGATCTTGCGTGAACGTAA 57.755 39.130 0.00 6.23 41.36 3.18
4455 5879 5.377478 TCTCCTAGATAGATCTTGCGTGAA 58.623 41.667 0.00 0.00 38.32 3.18
4498 5922 2.035576 GAGGGTACGTGAACACACTCTT 59.964 50.000 10.55 0.00 41.18 2.85
4508 5933 3.159298 GGTCTACGAGGGTACGTGA 57.841 57.895 0.00 0.00 46.02 4.35
4543 5969 2.598589 GACTACATCAACCGCGTTGTA 58.401 47.619 16.97 10.48 43.23 2.41
4568 5994 4.693538 TGATCAGTCAGAACGAGAAGAG 57.306 45.455 0.00 0.00 0.00 2.85
4584 6010 2.030628 TCGTACGTTCAGTGCTTGATCA 60.031 45.455 16.05 0.00 35.27 2.92
4595 6021 1.575922 CGGAGGTGTCGTACGTTCA 59.424 57.895 16.05 12.84 0.00 3.18
4614 6040 1.160329 AGCTGAACGTGTGCAGAACC 61.160 55.000 12.25 0.00 34.06 3.62
4643 6069 0.603975 ACTTTGCTGGAGTTCGAGGC 60.604 55.000 0.00 0.00 0.00 4.70
4693 6131 0.470341 TTCACCATCACCGTCACCAA 59.530 50.000 0.00 0.00 0.00 3.67
4746 6184 4.348168 AGTTTATGCCTCCGGTCATATCTT 59.652 41.667 0.00 0.00 0.00 2.40
4806 6247 1.295423 GGGCGCCTAGAACACAGAA 59.705 57.895 28.56 0.00 0.00 3.02
4808 6249 2.125106 GGGGCGCCTAGAACACAG 60.125 66.667 28.56 0.00 0.00 3.66
4923 6378 3.391955 CCGGTAATAAGTAATGTGGGGGA 59.608 47.826 0.00 0.00 0.00 4.81
4929 6384 3.070015 CCCCGTCCGGTAATAAGTAATGT 59.930 47.826 0.00 0.00 0.00 2.71
4931 6386 2.634453 CCCCCGTCCGGTAATAAGTAAT 59.366 50.000 0.00 0.00 0.00 1.89
4934 6389 0.032217 TCCCCCGTCCGGTAATAAGT 60.032 55.000 0.00 0.00 0.00 2.24
4947 6402 1.340114 CCTCTCTTTCCTTTTCCCCCG 60.340 57.143 0.00 0.00 0.00 5.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.