Multiple sequence alignment - TraesCS2D01G340600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G340600 chr2D 100.000 4319 0 0 1 4319 435073633 435069315 0.000000e+00 7976.0
1 TraesCS2D01G340600 chr2D 81.158 950 161 13 990 1933 11964745 11963808 0.000000e+00 747.0
2 TraesCS2D01G340600 chr2D 92.644 503 30 5 198 697 116057013 116056515 0.000000e+00 717.0
3 TraesCS2D01G340600 chr2D 92.292 506 33 5 196 696 596815766 596816270 0.000000e+00 713.0
4 TraesCS2D01G340600 chr2D 91.913 507 33 6 196 697 613427596 613428099 0.000000e+00 702.0
5 TraesCS2D01G340600 chr2D 83.333 756 114 6 2522 3265 11963414 11962659 0.000000e+00 688.0
6 TraesCS2D01G340600 chr2D 78.595 911 171 15 1023 1927 650656232 650655340 8.050000e-162 580.0
7 TraesCS2D01G340600 chr2D 78.158 934 174 20 1013 1928 4029549 4028628 6.270000e-158 568.0
8 TraesCS2D01G340600 chr2D 81.571 624 111 4 2556 3177 650654781 650654160 2.980000e-141 512.0
9 TraesCS2D01G340600 chr2D 80.929 624 115 4 2556 3177 650660952 650660331 1.400000e-134 490.0
10 TraesCS2D01G340600 chr2D 98.333 240 3 1 4081 4319 67595149 67595388 1.860000e-113 420.0
11 TraesCS2D01G340600 chr2D 76.373 783 170 10 1097 1876 3223090 3222320 1.450000e-109 407.0
12 TraesCS2D01G340600 chr2B 92.023 1592 91 10 2482 4055 513480150 513478577 0.000000e+00 2204.0
13 TraesCS2D01G340600 chr2B 94.981 1056 36 6 972 2020 513481274 513480229 0.000000e+00 1640.0
14 TraesCS2D01G340600 chr2B 77.282 942 182 22 1011 1930 7086396 7087327 3.830000e-145 525.0
15 TraesCS2D01G340600 chr2B 81.891 624 109 4 2556 3177 787819015 787818394 1.380000e-144 523.0
16 TraesCS2D01G340600 chr2B 93.585 265 16 1 2156 2420 775369854 775370117 1.130000e-105 394.0
17 TraesCS2D01G340600 chr2B 95.000 240 11 1 4081 4319 118702659 118702420 4.080000e-100 375.0
18 TraesCS2D01G340600 chr2B 87.981 208 14 2 716 913 513481599 513481393 7.220000e-58 235.0
19 TraesCS2D01G340600 chr2B 92.222 90 3 3 2037 2125 513480247 513480161 1.630000e-24 124.0
20 TraesCS2D01G340600 chr2A 93.423 1338 65 14 694 2020 551721188 551722513 0.000000e+00 1962.0
21 TraesCS2D01G340600 chr2A 94.901 961 37 4 2482 3441 551722633 551723582 0.000000e+00 1493.0
22 TraesCS2D01G340600 chr2A 81.343 938 157 13 1002 1933 12702363 12701438 0.000000e+00 747.0
23 TraesCS2D01G340600 chr2A 91.923 520 24 8 3423 3934 551808903 551809412 0.000000e+00 712.0
24 TraesCS2D01G340600 chr2A 84.146 738 108 4 2522 3250 12701042 12700305 0.000000e+00 706.0
25 TraesCS2D01G340600 chr2A 82.654 761 112 16 2522 3266 12577660 12576904 0.000000e+00 656.0
26 TraesCS2D01G340600 chr2A 82.278 711 112 9 2551 3250 12588832 12588125 1.720000e-168 603.0
27 TraesCS2D01G340600 chr2A 81.410 624 112 4 2556 3177 772219429 772218808 1.390000e-139 507.0
28 TraesCS2D01G340600 chr2A 94.052 269 14 2 2156 2423 575349283 575349016 1.450000e-109 407.0
29 TraesCS2D01G340600 chr2A 92.574 202 8 6 1 199 551720991 551721188 2.540000e-72 283.0
30 TraesCS2D01G340600 chr2A 92.617 149 11 0 3936 4084 551809533 551809681 9.410000e-52 215.0
31 TraesCS2D01G340600 chr2A 88.095 126 11 2 2035 2159 551722493 551722615 3.480000e-31 147.0
32 TraesCS2D01G340600 chr2A 97.872 47 1 0 3755 3801 551809190 551809236 9.950000e-12 82.4
33 TraesCS2D01G340600 chr2A 100.000 28 0 0 2459 2486 433418363 433418390 8.000000e-03 52.8
34 TraesCS2D01G340600 chr5D 85.373 964 126 7 1000 1959 522761652 522760700 0.000000e+00 985.0
35 TraesCS2D01G340600 chr5D 91.154 520 36 7 184 695 3570089 3569572 0.000000e+00 697.0
36 TraesCS2D01G340600 chr5D 86.517 623 84 0 2549 3171 522759645 522759023 0.000000e+00 686.0
37 TraesCS2D01G340600 chr5D 93.680 269 12 3 2154 2420 488096993 488097258 8.700000e-107 398.0
38 TraesCS2D01G340600 chr5D 92.437 119 8 1 771 889 522761943 522761826 7.430000e-38 169.0
39 TraesCS2D01G340600 chr7D 91.865 504 34 4 199 695 418619196 418618693 0.000000e+00 697.0
40 TraesCS2D01G340600 chr7D 99.167 240 1 1 4081 4319 234178091 234178330 8.580000e-117 431.0
41 TraesCS2D01G340600 chr7D 97.468 237 5 1 4084 4319 188394061 188393825 1.870000e-108 403.0
42 TraesCS2D01G340600 chr7D 75.325 616 142 9 2552 3162 591209321 591209931 1.970000e-73 287.0
43 TraesCS2D01G340600 chr1D 91.833 502 33 4 199 694 493775120 493775619 0.000000e+00 693.0
44 TraesCS2D01G340600 chr1D 99.167 240 1 1 4081 4319 62955182 62954943 8.580000e-117 431.0
45 TraesCS2D01G340600 chr1D 84.298 242 33 4 4081 4319 379127545 379127306 9.340000e-57 231.0
46 TraesCS2D01G340600 chr1D 95.455 44 2 0 2447 2490 22882301 22882344 2.150000e-08 71.3
47 TraesCS2D01G340600 chr6D 91.650 503 37 3 198 695 324637514 324638016 0.000000e+00 691.0
48 TraesCS2D01G340600 chr6D 98.340 241 2 2 4081 4319 186967562 186967322 5.160000e-114 422.0
49 TraesCS2D01G340600 chr3D 90.667 525 42 7 198 717 612249036 612249558 0.000000e+00 691.0
50 TraesCS2D01G340600 chr3D 96.324 272 8 2 2153 2424 536423841 536423572 3.060000e-121 446.0
51 TraesCS2D01G340600 chr3D 93.233 266 17 1 2156 2421 87391999 87391735 1.460000e-104 390.0
52 TraesCS2D01G340600 chr3D 95.833 240 9 1 4081 4319 102204651 102204890 1.880000e-103 387.0
53 TraesCS2D01G340600 chr3D 75.748 635 140 13 2551 3177 73714315 73713687 1.510000e-79 307.0
54 TraesCS2D01G340600 chr3D 86.667 240 31 1 4081 4319 138184605 138184366 9.210000e-67 265.0
55 TraesCS2D01G340600 chr4D 91.228 513 32 10 191 695 274229807 274229300 0.000000e+00 686.0
56 TraesCS2D01G340600 chr4D 92.251 271 19 2 2153 2423 100317593 100317861 2.440000e-102 383.0
57 TraesCS2D01G340600 chr4D 92.000 275 18 3 2148 2420 451164191 451164463 2.440000e-102 383.0
58 TraesCS2D01G340600 chr5A 79.172 797 145 15 1022 1815 626232672 626231894 2.290000e-147 532.0
59 TraesCS2D01G340600 chr5A 79.647 624 118 7 2556 3177 626229005 626228389 1.430000e-119 440.0
60 TraesCS2D01G340600 chr5A 93.750 240 14 1 4081 4319 364966957 364966718 4.110000e-95 359.0
61 TraesCS2D01G340600 chr5A 93.697 238 14 1 4083 4319 502046141 502046378 5.310000e-94 355.0
62 TraesCS2D01G340600 chr5A 100.000 28 0 0 2459 2486 502661447 502661474 8.000000e-03 52.8
63 TraesCS2D01G340600 chr5B 80.609 624 117 4 2556 3177 622555377 622555998 3.020000e-131 479.0
64 TraesCS2D01G340600 chr3B 93.585 265 16 1 2156 2420 368323062 368322799 1.130000e-105 394.0
65 TraesCS2D01G340600 chr3B 94.167 240 13 1 4081 4319 482504516 482504755 8.830000e-97 364.0
66 TraesCS2D01G340600 chr7B 92.884 267 18 1 2154 2420 737371255 737371520 1.880000e-103 387.0
67 TraesCS2D01G340600 chr4B 95.417 240 10 1 4081 4319 539480805 539480566 8.760000e-102 381.0
68 TraesCS2D01G340600 chr4B 85.000 240 35 1 4081 4319 615395526 615395765 4.320000e-60 243.0
69 TraesCS2D01G340600 chr1B 91.228 57 5 0 2438 2494 22328175 22328231 1.290000e-10 78.7
70 TraesCS2D01G340600 chr7A 100.000 28 0 0 2459 2486 378967462 378967435 8.000000e-03 52.8
71 TraesCS2D01G340600 chr4A 100.000 28 0 0 2459 2486 419965234 419965207 8.000000e-03 52.8
72 TraesCS2D01G340600 chr4A 100.000 28 0 0 2459 2486 428567604 428567631 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G340600 chr2D 435069315 435073633 4318 True 7976.000000 7976 100.000000 1 4319 1 chr2D.!!$R4 4318
1 TraesCS2D01G340600 chr2D 11962659 11964745 2086 True 717.500000 747 82.245500 990 3265 2 chr2D.!!$R6 2275
2 TraesCS2D01G340600 chr2D 596815766 596816270 504 False 713.000000 713 92.292000 196 696 1 chr2D.!!$F2 500
3 TraesCS2D01G340600 chr2D 613427596 613428099 503 False 702.000000 702 91.913000 196 697 1 chr2D.!!$F3 501
4 TraesCS2D01G340600 chr2D 4028628 4029549 921 True 568.000000 568 78.158000 1013 1928 1 chr2D.!!$R2 915
5 TraesCS2D01G340600 chr2D 650654160 650656232 2072 True 546.000000 580 80.083000 1023 3177 2 chr2D.!!$R7 2154
6 TraesCS2D01G340600 chr2D 650660331 650660952 621 True 490.000000 490 80.929000 2556 3177 1 chr2D.!!$R5 621
7 TraesCS2D01G340600 chr2D 3222320 3223090 770 True 407.000000 407 76.373000 1097 1876 1 chr2D.!!$R1 779
8 TraesCS2D01G340600 chr2B 513478577 513481599 3022 True 1050.750000 2204 91.801750 716 4055 4 chr2B.!!$R3 3339
9 TraesCS2D01G340600 chr2B 7086396 7087327 931 False 525.000000 525 77.282000 1011 1930 1 chr2B.!!$F1 919
10 TraesCS2D01G340600 chr2B 787818394 787819015 621 True 523.000000 523 81.891000 2556 3177 1 chr2B.!!$R2 621
11 TraesCS2D01G340600 chr2A 551720991 551723582 2591 False 971.250000 1962 92.248250 1 3441 4 chr2A.!!$F2 3440
12 TraesCS2D01G340600 chr2A 12700305 12702363 2058 True 726.500000 747 82.744500 1002 3250 2 chr2A.!!$R5 2248
13 TraesCS2D01G340600 chr2A 12576904 12577660 756 True 656.000000 656 82.654000 2522 3266 1 chr2A.!!$R1 744
14 TraesCS2D01G340600 chr2A 12588125 12588832 707 True 603.000000 603 82.278000 2551 3250 1 chr2A.!!$R2 699
15 TraesCS2D01G340600 chr2A 772218808 772219429 621 True 507.000000 507 81.410000 2556 3177 1 chr2A.!!$R4 621
16 TraesCS2D01G340600 chr2A 551808903 551809681 778 False 336.466667 712 94.137333 3423 4084 3 chr2A.!!$F3 661
17 TraesCS2D01G340600 chr5D 3569572 3570089 517 True 697.000000 697 91.154000 184 695 1 chr5D.!!$R1 511
18 TraesCS2D01G340600 chr5D 522759023 522761943 2920 True 613.333333 985 88.109000 771 3171 3 chr5D.!!$R2 2400
19 TraesCS2D01G340600 chr7D 418618693 418619196 503 True 697.000000 697 91.865000 199 695 1 chr7D.!!$R2 496
20 TraesCS2D01G340600 chr7D 591209321 591209931 610 False 287.000000 287 75.325000 2552 3162 1 chr7D.!!$F2 610
21 TraesCS2D01G340600 chr6D 324637514 324638016 502 False 691.000000 691 91.650000 198 695 1 chr6D.!!$F1 497
22 TraesCS2D01G340600 chr3D 612249036 612249558 522 False 691.000000 691 90.667000 198 717 1 chr3D.!!$F2 519
23 TraesCS2D01G340600 chr3D 73713687 73714315 628 True 307.000000 307 75.748000 2551 3177 1 chr3D.!!$R1 626
24 TraesCS2D01G340600 chr4D 274229300 274229807 507 True 686.000000 686 91.228000 191 695 1 chr4D.!!$R1 504
25 TraesCS2D01G340600 chr5A 626228389 626232672 4283 True 486.000000 532 79.409500 1022 3177 2 chr5A.!!$R2 2155
26 TraesCS2D01G340600 chr5B 622555377 622555998 621 False 479.000000 479 80.609000 2556 3177 1 chr5B.!!$F1 621

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
951 1024 1.153647 CGCTCATGTTCCGCCTACA 60.154 57.895 0.0 0.0 0.0 2.74 F
2116 3083 0.752054 TTTGGGCTTTGACTTGCTGG 59.248 50.000 0.0 0.0 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2406 4278 0.107459 ACGTAGTACTCCCTCCGTCC 60.107 60.0 0.00 0.0 41.94 4.79 R
4092 7698 0.455815 CTAGGGCGGCAAACCAAATC 59.544 55.0 12.47 0.0 34.57 2.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
42 43 3.294214 TCGGATGGAGGGAGTAGTTAAC 58.706 50.000 0.00 0.00 0.00 2.01
48 49 6.783482 GGATGGAGGGAGTAGTTAACTAGAAT 59.217 42.308 15.68 5.22 39.07 2.40
49 50 7.256012 GGATGGAGGGAGTAGTTAACTAGAATG 60.256 44.444 15.68 0.00 39.07 2.67
55 57 7.288158 AGGGAGTAGTTAACTAGAATGTCATCC 59.712 40.741 15.68 11.67 39.07 3.51
231 236 8.097038 AGATGTCTATGCATTGTACGGAATATT 58.903 33.333 3.54 0.00 0.00 1.28
272 278 9.747898 TTACAAAACACCTATTATGATTGACCT 57.252 29.630 0.00 0.00 0.00 3.85
289 295 1.971357 ACCTATGCAGGAGTAATCCCG 59.029 52.381 5.39 0.00 45.91 5.14
312 318 9.537192 CCCGTGTGTAAAAACTAATGATATCTA 57.463 33.333 3.98 0.00 0.00 1.98
400 409 5.136068 AGAGATAATGTGAGGAGGAGTGA 57.864 43.478 0.00 0.00 0.00 3.41
495 504 4.144297 CCAAATTGTTCCAGAGACTTCCA 58.856 43.478 0.00 0.00 0.00 3.53
616 634 6.403049 TCATAGTTTGCTTTCTATCCGTCAA 58.597 36.000 0.00 0.00 0.00 3.18
657 675 2.512692 TTACAAGATGGCAGGCACAT 57.487 45.000 0.00 0.00 0.00 3.21
664 682 1.961394 GATGGCAGGCACATCATCATT 59.039 47.619 0.00 0.00 43.21 2.57
725 744 6.631016 TCGATAGATAGTAAATGCCCATCAC 58.369 40.000 0.00 0.00 42.67 3.06
769 798 4.259970 CGCTGTTATCTTGGTCAATTCTCG 60.260 45.833 0.00 0.00 0.00 4.04
818 847 3.084039 TGTTCTCCTGTGATGCCAATTC 58.916 45.455 0.00 0.00 0.00 2.17
849 878 1.747355 GTGATCCATCAGGCAACCTTG 59.253 52.381 0.00 0.00 37.51 3.61
919 959 3.507411 GGCTACTACCCATACTCATCCA 58.493 50.000 0.00 0.00 0.00 3.41
945 1018 2.464459 GGCTTCCGCTCATGTTCCG 61.464 63.158 0.00 0.00 36.09 4.30
949 1022 1.609635 TTCCGCTCATGTTCCGCCTA 61.610 55.000 0.00 0.00 0.00 3.93
951 1024 1.153647 CGCTCATGTTCCGCCTACA 60.154 57.895 0.00 0.00 0.00 2.74
952 1025 1.421410 CGCTCATGTTCCGCCTACAC 61.421 60.000 0.00 0.00 0.00 2.90
956 1029 1.754803 TCATGTTCCGCCTACACCTAG 59.245 52.381 0.00 0.00 0.00 3.02
986 1092 3.697045 GGCTATATATCCGTCTCAGCTGT 59.303 47.826 14.67 0.00 0.00 4.40
988 1094 4.495019 GCTATATATCCGTCTCAGCTGTCG 60.495 50.000 14.67 16.00 0.00 4.35
1150 1286 2.529632 CCATGGACTCTCCCGATCATA 58.470 52.381 5.56 0.00 35.03 2.15
1211 1347 2.430465 GCACCATCACTGATCTGTGTT 58.570 47.619 26.16 18.25 38.90 3.32
1696 1835 1.744368 CCTCTTCCCGTCGTCTCGA 60.744 63.158 0.00 0.00 0.00 4.04
1706 1845 3.733960 CGTCTCGACTGGTGCGGA 61.734 66.667 0.00 0.00 0.00 5.54
1960 2189 6.192360 GGTCATTTTCTAATCGTTTGGATCG 58.808 40.000 0.00 0.00 33.02 3.69
1963 2192 7.794349 GTCATTTTCTAATCGTTTGGATCGATC 59.206 37.037 17.36 17.36 45.33 3.69
1964 2193 7.710907 TCATTTTCTAATCGTTTGGATCGATCT 59.289 33.333 23.96 5.14 45.33 2.75
1965 2194 7.464830 TTTTCTAATCGTTTGGATCGATCTC 57.535 36.000 23.96 14.76 45.33 2.75
1966 2195 5.767816 TCTAATCGTTTGGATCGATCTCA 57.232 39.130 23.96 17.02 45.33 3.27
1989 2220 3.570926 TGTGACCTCTTCGTCATGTAC 57.429 47.619 0.00 0.00 44.27 2.90
1999 2836 3.945981 TCGTCATGTACAGGCAAGTTA 57.054 42.857 1.79 0.00 0.00 2.24
2002 2839 3.743911 CGTCATGTACAGGCAAGTTAACA 59.256 43.478 8.61 0.00 0.00 2.41
2003 2840 4.391830 CGTCATGTACAGGCAAGTTAACAT 59.608 41.667 8.61 0.00 0.00 2.71
2005 2842 5.411361 GTCATGTACAGGCAAGTTAACATCA 59.589 40.000 8.61 0.00 0.00 3.07
2006 2843 6.094048 GTCATGTACAGGCAAGTTAACATCAT 59.906 38.462 8.61 0.00 0.00 2.45
2007 2844 7.279981 GTCATGTACAGGCAAGTTAACATCATA 59.720 37.037 8.61 0.00 0.00 2.15
2008 2845 7.495606 TCATGTACAGGCAAGTTAACATCATAG 59.504 37.037 8.61 0.00 0.00 2.23
2009 2846 5.584649 TGTACAGGCAAGTTAACATCATAGC 59.415 40.000 8.61 2.32 0.00 2.97
2010 2847 4.848357 ACAGGCAAGTTAACATCATAGCT 58.152 39.130 8.61 0.00 0.00 3.32
2011 2848 5.989477 ACAGGCAAGTTAACATCATAGCTA 58.011 37.500 8.61 0.00 0.00 3.32
2013 2850 5.468072 CAGGCAAGTTAACATCATAGCTAGG 59.532 44.000 8.61 0.00 0.00 3.02
2015 2852 5.823045 GGCAAGTTAACATCATAGCTAGGTT 59.177 40.000 8.61 6.69 0.00 3.50
2017 2854 7.410485 GCAAGTTAACATCATAGCTAGGTTTC 58.590 38.462 8.61 2.55 0.00 2.78
2019 2856 8.821894 CAAGTTAACATCATAGCTAGGTTTCTC 58.178 37.037 8.61 0.30 0.00 2.87
2020 2857 7.203910 AGTTAACATCATAGCTAGGTTTCTCG 58.796 38.462 8.61 0.00 0.00 4.04
2022 2859 5.599999 ACATCATAGCTAGGTTTCTCGTT 57.400 39.130 5.15 0.00 0.00 3.85
2024 2861 6.043411 ACATCATAGCTAGGTTTCTCGTTTC 58.957 40.000 5.15 0.00 0.00 2.78
2028 2865 6.932400 TCATAGCTAGGTTTCTCGTTTCAAAA 59.068 34.615 5.15 0.00 0.00 2.44
2116 3083 0.752054 TTTGGGCTTTGACTTGCTGG 59.248 50.000 0.00 0.00 0.00 4.85
2125 3092 1.985473 TGACTTGCTGGCAGTTGATT 58.015 45.000 17.16 0.00 0.00 2.57
2159 4031 5.460419 CACGAGAGGAAATAGTTGCATACTC 59.540 44.000 5.04 2.42 38.33 2.59
2161 4033 5.297569 AGAGGAAATAGTTGCATACTCCC 57.702 43.478 5.04 4.24 38.33 4.30
2162 4034 4.971924 AGAGGAAATAGTTGCATACTCCCT 59.028 41.667 5.04 7.80 38.33 4.20
2163 4035 5.071115 AGAGGAAATAGTTGCATACTCCCTC 59.929 44.000 18.45 18.45 38.39 4.30
2164 4036 4.103311 AGGAAATAGTTGCATACTCCCTCC 59.897 45.833 5.04 8.86 38.33 4.30
2165 4037 4.141482 GGAAATAGTTGCATACTCCCTCCA 60.141 45.833 5.04 0.00 38.33 3.86
2166 4038 5.456763 GGAAATAGTTGCATACTCCCTCCAT 60.457 44.000 5.04 0.00 38.33 3.41
2167 4039 5.653255 AATAGTTGCATACTCCCTCCATT 57.347 39.130 5.04 0.00 38.33 3.16
2168 4040 3.567478 AGTTGCATACTCCCTCCATTC 57.433 47.619 0.00 0.00 28.23 2.67
2169 4041 3.118531 AGTTGCATACTCCCTCCATTCT 58.881 45.455 0.00 0.00 28.23 2.40
2170 4042 3.525199 AGTTGCATACTCCCTCCATTCTT 59.475 43.478 0.00 0.00 28.23 2.52
2171 4043 3.565764 TGCATACTCCCTCCATTCTTG 57.434 47.619 0.00 0.00 0.00 3.02
2172 4044 3.114606 TGCATACTCCCTCCATTCTTGA 58.885 45.455 0.00 0.00 0.00 3.02
2173 4045 3.523157 TGCATACTCCCTCCATTCTTGAA 59.477 43.478 0.00 0.00 0.00 2.69
2174 4046 4.018506 TGCATACTCCCTCCATTCTTGAAA 60.019 41.667 0.00 0.00 0.00 2.69
2175 4047 4.578105 GCATACTCCCTCCATTCTTGAAAG 59.422 45.833 0.00 0.00 0.00 2.62
2176 4048 5.630069 GCATACTCCCTCCATTCTTGAAAGA 60.630 44.000 0.00 0.00 0.00 2.52
2177 4049 4.566426 ACTCCCTCCATTCTTGAAAGAG 57.434 45.455 6.74 6.74 36.22 2.85
2178 4050 3.913163 ACTCCCTCCATTCTTGAAAGAGT 59.087 43.478 10.69 0.00 36.22 3.24
2179 4051 4.260170 CTCCCTCCATTCTTGAAAGAGTG 58.740 47.826 8.22 8.22 41.02 3.51
2180 4052 3.652869 TCCCTCCATTCTTGAAAGAGTGT 59.347 43.478 12.76 0.00 40.09 3.55
2181 4053 4.844085 TCCCTCCATTCTTGAAAGAGTGTA 59.156 41.667 12.76 0.00 40.09 2.90
2182 4054 4.938226 CCCTCCATTCTTGAAAGAGTGTAC 59.062 45.833 12.76 0.00 40.09 2.90
2183 4055 5.280215 CCCTCCATTCTTGAAAGAGTGTACT 60.280 44.000 12.76 0.00 40.09 2.73
2184 4056 6.234177 CCTCCATTCTTGAAAGAGTGTACTT 58.766 40.000 12.76 0.00 40.09 2.24
2185 4057 6.712547 CCTCCATTCTTGAAAGAGTGTACTTT 59.287 38.462 12.76 0.00 40.09 2.66
2197 4069 6.436843 AGAGTGTACTTTCAACTTTGTTGG 57.563 37.500 10.05 0.00 0.00 3.77
2198 4070 6.177610 AGAGTGTACTTTCAACTTTGTTGGA 58.822 36.000 10.05 0.00 0.00 3.53
2199 4071 6.657541 AGAGTGTACTTTCAACTTTGTTGGAA 59.342 34.615 10.05 7.19 0.00 3.53
2200 4072 7.175990 AGAGTGTACTTTCAACTTTGTTGGAAA 59.824 33.333 10.05 8.44 0.00 3.13
2258 4130 8.532186 ACAATAATAGACCAACATTTATGCCA 57.468 30.769 0.00 0.00 0.00 4.92
2259 4131 9.146586 ACAATAATAGACCAACATTTATGCCAT 57.853 29.630 0.00 0.00 0.00 4.40
2260 4132 9.630098 CAATAATAGACCAACATTTATGCCATC 57.370 33.333 0.00 0.00 0.00 3.51
2261 4133 8.938801 ATAATAGACCAACATTTATGCCATCA 57.061 30.769 0.00 0.00 0.00 3.07
2262 4134 7.658525 AATAGACCAACATTTATGCCATCAA 57.341 32.000 0.00 0.00 0.00 2.57
2263 4135 5.999205 AGACCAACATTTATGCCATCAAA 57.001 34.783 0.00 0.00 0.00 2.69
2264 4136 6.549433 AGACCAACATTTATGCCATCAAAT 57.451 33.333 0.00 0.00 0.00 2.32
2265 4137 6.949715 AGACCAACATTTATGCCATCAAATT 58.050 32.000 0.00 0.00 0.00 1.82
2266 4138 8.076910 AGACCAACATTTATGCCATCAAATTA 57.923 30.769 0.00 0.00 0.00 1.40
2267 4139 8.538701 AGACCAACATTTATGCCATCAAATTAA 58.461 29.630 0.00 0.00 0.00 1.40
2268 4140 9.328845 GACCAACATTTATGCCATCAAATTAAT 57.671 29.630 0.00 0.00 0.00 1.40
2349 4221 9.807649 AGCATTGATATATTTTTCCACAAACTC 57.192 29.630 0.00 0.00 0.00 3.01
2350 4222 8.745837 GCATTGATATATTTTTCCACAAACTCG 58.254 33.333 0.00 0.00 0.00 4.18
2351 4223 9.236691 CATTGATATATTTTTCCACAAACTCGG 57.763 33.333 0.00 0.00 0.00 4.63
2352 4224 7.931578 TGATATATTTTTCCACAAACTCGGT 57.068 32.000 0.00 0.00 0.00 4.69
2353 4225 7.981142 TGATATATTTTTCCACAAACTCGGTC 58.019 34.615 0.00 0.00 0.00 4.79
2354 4226 7.608376 TGATATATTTTTCCACAAACTCGGTCA 59.392 33.333 0.00 0.00 0.00 4.02
2355 4227 4.993029 ATTTTTCCACAAACTCGGTCAA 57.007 36.364 0.00 0.00 0.00 3.18
2356 4228 4.785511 TTTTTCCACAAACTCGGTCAAA 57.214 36.364 0.00 0.00 0.00 2.69
2357 4229 3.768468 TTTCCACAAACTCGGTCAAAC 57.232 42.857 0.00 0.00 0.00 2.93
2358 4230 2.702592 TCCACAAACTCGGTCAAACT 57.297 45.000 0.00 0.00 0.00 2.66
2359 4231 2.993937 TCCACAAACTCGGTCAAACTT 58.006 42.857 0.00 0.00 0.00 2.66
2360 4232 3.349022 TCCACAAACTCGGTCAAACTTT 58.651 40.909 0.00 0.00 0.00 2.66
2361 4233 3.127895 TCCACAAACTCGGTCAAACTTTG 59.872 43.478 0.00 0.00 0.00 2.77
2362 4234 3.127895 CCACAAACTCGGTCAAACTTTGA 59.872 43.478 0.00 0.00 37.33 2.69
2363 4235 4.342772 CACAAACTCGGTCAAACTTTGAG 58.657 43.478 4.36 0.00 41.01 3.02
2364 4236 4.094294 CACAAACTCGGTCAAACTTTGAGA 59.906 41.667 4.36 0.00 41.01 3.27
2365 4237 4.881850 ACAAACTCGGTCAAACTTTGAGAT 59.118 37.500 4.36 0.00 41.01 2.75
2366 4238 6.018262 CACAAACTCGGTCAAACTTTGAGATA 60.018 38.462 4.36 0.00 41.01 1.98
2367 4239 6.540914 ACAAACTCGGTCAAACTTTGAGATAA 59.459 34.615 4.36 0.00 41.01 1.75
2368 4240 7.228706 ACAAACTCGGTCAAACTTTGAGATAAT 59.771 33.333 4.36 0.00 41.01 1.28
2369 4241 7.745620 AACTCGGTCAAACTTTGAGATAATT 57.254 32.000 4.36 0.00 41.01 1.40
2370 4242 7.745620 ACTCGGTCAAACTTTGAGATAATTT 57.254 32.000 4.36 0.00 41.01 1.82
2371 4243 7.584987 ACTCGGTCAAACTTTGAGATAATTTG 58.415 34.615 4.36 0.00 41.01 2.32
2372 4244 7.444183 ACTCGGTCAAACTTTGAGATAATTTGA 59.556 33.333 4.36 0.00 41.01 2.69
2376 4248 7.886338 GTCAAACTTTGAGATAATTTGACCCT 58.114 34.615 14.32 0.00 46.95 4.34
2377 4249 8.023706 GTCAAACTTTGAGATAATTTGACCCTC 58.976 37.037 14.32 0.00 46.95 4.30
2378 4250 7.176690 TCAAACTTTGAGATAATTTGACCCTCC 59.823 37.037 0.00 0.00 35.05 4.30
2379 4251 6.139679 ACTTTGAGATAATTTGACCCTCCA 57.860 37.500 0.00 0.00 0.00 3.86
2380 4252 6.552008 ACTTTGAGATAATTTGACCCTCCAA 58.448 36.000 0.00 0.00 0.00 3.53
2381 4253 6.434340 ACTTTGAGATAATTTGACCCTCCAAC 59.566 38.462 0.00 0.00 0.00 3.77
2382 4254 5.512942 TGAGATAATTTGACCCTCCAACA 57.487 39.130 0.00 0.00 0.00 3.33
2383 4255 5.886609 TGAGATAATTTGACCCTCCAACAA 58.113 37.500 0.00 0.00 0.00 2.83
2384 4256 6.310941 TGAGATAATTTGACCCTCCAACAAA 58.689 36.000 0.00 0.00 37.79 2.83
2385 4257 6.434028 TGAGATAATTTGACCCTCCAACAAAG 59.566 38.462 0.00 0.00 37.04 2.77
2386 4258 6.314917 AGATAATTTGACCCTCCAACAAAGT 58.685 36.000 0.00 0.00 37.04 2.66
2387 4259 6.782494 AGATAATTTGACCCTCCAACAAAGTT 59.218 34.615 0.00 0.00 37.04 2.66
2388 4260 4.670896 ATTTGACCCTCCAACAAAGTTG 57.329 40.909 3.00 3.00 37.04 3.16
2389 4261 2.065899 TGACCCTCCAACAAAGTTGG 57.934 50.000 20.09 20.09 40.87 3.77
2390 4262 1.566703 TGACCCTCCAACAAAGTTGGA 59.433 47.619 25.17 25.17 45.61 3.53
2391 4263 2.024846 TGACCCTCCAACAAAGTTGGAA 60.025 45.455 26.25 12.88 46.85 3.53
2392 4264 2.623416 GACCCTCCAACAAAGTTGGAAG 59.377 50.000 26.25 21.51 46.85 3.46
2393 4265 2.024369 ACCCTCCAACAAAGTTGGAAGT 60.024 45.455 26.25 22.95 46.85 3.01
2394 4266 3.203487 ACCCTCCAACAAAGTTGGAAGTA 59.797 43.478 26.25 9.67 46.85 2.24
2395 4267 3.568430 CCCTCCAACAAAGTTGGAAGTAC 59.432 47.826 26.25 0.00 46.85 2.73
2396 4268 4.204012 CCTCCAACAAAGTTGGAAGTACA 58.796 43.478 26.25 8.75 46.85 2.90
2397 4269 4.036380 CCTCCAACAAAGTTGGAAGTACAC 59.964 45.833 26.25 0.00 46.85 2.90
2398 4270 4.850680 TCCAACAAAGTTGGAAGTACACT 58.149 39.130 24.83 0.00 44.90 3.55
2399 4271 4.879545 TCCAACAAAGTTGGAAGTACACTC 59.120 41.667 24.83 0.00 44.90 3.51
2400 4272 4.881850 CCAACAAAGTTGGAAGTACACTCT 59.118 41.667 21.24 0.00 42.06 3.24
2401 4273 5.357032 CCAACAAAGTTGGAAGTACACTCTT 59.643 40.000 21.24 0.00 42.06 2.85
2402 4274 6.127730 CCAACAAAGTTGGAAGTACACTCTTT 60.128 38.462 21.24 0.00 42.06 2.52
2403 4275 7.312899 CAACAAAGTTGGAAGTACACTCTTTT 58.687 34.615 2.05 0.00 0.00 2.27
2404 4276 8.455682 CAACAAAGTTGGAAGTACACTCTTTTA 58.544 33.333 2.05 0.00 0.00 1.52
2405 4277 8.570068 ACAAAGTTGGAAGTACACTCTTTTAA 57.430 30.769 0.00 0.00 0.00 1.52
2406 4278 8.674607 ACAAAGTTGGAAGTACACTCTTTTAAG 58.325 33.333 0.00 0.00 0.00 1.85
2407 4279 7.803279 AAGTTGGAAGTACACTCTTTTAAGG 57.197 36.000 0.00 0.00 0.00 2.69
2408 4280 7.133133 AGTTGGAAGTACACTCTTTTAAGGA 57.867 36.000 0.00 0.00 0.00 3.36
2409 4281 6.990939 AGTTGGAAGTACACTCTTTTAAGGAC 59.009 38.462 0.00 0.00 0.00 3.85
2410 4282 5.535333 TGGAAGTACACTCTTTTAAGGACG 58.465 41.667 0.00 0.00 0.00 4.79
2411 4283 4.928020 GGAAGTACACTCTTTTAAGGACGG 59.072 45.833 0.00 0.00 0.00 4.79
2412 4284 5.279156 GGAAGTACACTCTTTTAAGGACGGA 60.279 44.000 0.00 0.00 0.00 4.69
2413 4285 5.388408 AGTACACTCTTTTAAGGACGGAG 57.612 43.478 0.00 0.00 0.00 4.63
2414 4286 3.679824 ACACTCTTTTAAGGACGGAGG 57.320 47.619 0.00 0.00 0.00 4.30
2415 4287 2.302157 ACACTCTTTTAAGGACGGAGGG 59.698 50.000 0.00 0.00 34.07 4.30
2416 4288 2.565834 CACTCTTTTAAGGACGGAGGGA 59.434 50.000 0.00 0.00 29.82 4.20
2417 4289 2.832733 ACTCTTTTAAGGACGGAGGGAG 59.167 50.000 0.00 0.00 0.00 4.30
2418 4290 2.832733 CTCTTTTAAGGACGGAGGGAGT 59.167 50.000 0.00 0.00 0.00 3.85
2419 4291 4.021916 CTCTTTTAAGGACGGAGGGAGTA 58.978 47.826 0.00 0.00 0.00 2.59
2420 4292 3.766051 TCTTTTAAGGACGGAGGGAGTAC 59.234 47.826 0.00 0.00 0.00 2.73
2421 4293 3.463048 TTTAAGGACGGAGGGAGTACT 57.537 47.619 0.00 0.00 33.42 2.73
2422 4294 4.591321 TTTAAGGACGGAGGGAGTACTA 57.409 45.455 0.00 0.00 31.41 1.82
2423 4295 2.433662 AAGGACGGAGGGAGTACTAC 57.566 55.000 0.00 0.00 31.41 2.73
2457 4329 9.709495 TTTAAATAGTTTAGCCTACAAAGACGA 57.291 29.630 0.00 0.00 0.00 4.20
2458 4330 7.592439 AAATAGTTTAGCCTACAAAGACGAC 57.408 36.000 0.00 0.00 0.00 4.34
2459 4331 4.868314 AGTTTAGCCTACAAAGACGACT 57.132 40.909 0.00 0.00 0.00 4.18
2460 4332 5.211174 AGTTTAGCCTACAAAGACGACTT 57.789 39.130 0.00 0.00 38.05 3.01
2461 4333 6.336842 AGTTTAGCCTACAAAGACGACTTA 57.663 37.500 0.00 0.00 35.05 2.24
2462 4334 6.932947 AGTTTAGCCTACAAAGACGACTTAT 58.067 36.000 0.00 0.00 35.05 1.73
2463 4335 8.059798 AGTTTAGCCTACAAAGACGACTTATA 57.940 34.615 0.00 0.00 35.05 0.98
2464 4336 8.693625 AGTTTAGCCTACAAAGACGACTTATAT 58.306 33.333 0.00 0.00 35.05 0.86
2465 4337 9.310716 GTTTAGCCTACAAAGACGACTTATATT 57.689 33.333 0.00 0.00 35.05 1.28
2466 4338 9.880157 TTTAGCCTACAAAGACGACTTATATTT 57.120 29.630 0.00 0.00 35.05 1.40
2467 4339 9.880157 TTAGCCTACAAAGACGACTTATATTTT 57.120 29.630 0.00 0.00 35.05 1.82
2468 4340 8.197988 AGCCTACAAAGACGACTTATATTTTG 57.802 34.615 0.00 0.00 35.05 2.44
2469 4341 7.280205 AGCCTACAAAGACGACTTATATTTTGG 59.720 37.037 0.00 0.00 35.05 3.28
2470 4342 7.065443 GCCTACAAAGACGACTTATATTTTGGT 59.935 37.037 0.00 0.00 35.05 3.67
2471 4343 9.590451 CCTACAAAGACGACTTATATTTTGGTA 57.410 33.333 0.00 0.00 35.05 3.25
2473 4345 7.956558 ACAAAGACGACTTATATTTTGGTACG 58.043 34.615 0.00 0.00 35.05 3.67
2474 4346 7.063780 ACAAAGACGACTTATATTTTGGTACGG 59.936 37.037 0.00 0.00 35.05 4.02
2475 4347 6.455360 AGACGACTTATATTTTGGTACGGA 57.545 37.500 0.00 0.00 0.00 4.69
2476 4348 6.501781 AGACGACTTATATTTTGGTACGGAG 58.498 40.000 0.00 0.00 0.00 4.63
2477 4349 5.594926 ACGACTTATATTTTGGTACGGAGG 58.405 41.667 0.00 0.00 0.00 4.30
2478 4350 5.127682 ACGACTTATATTTTGGTACGGAGGT 59.872 40.000 0.00 0.00 0.00 3.85
2479 4351 6.321181 ACGACTTATATTTTGGTACGGAGGTA 59.679 38.462 0.00 0.00 0.00 3.08
2480 4352 6.860023 CGACTTATATTTTGGTACGGAGGTAG 59.140 42.308 0.00 0.00 0.00 3.18
2683 6133 4.139859 TCGAGAGGTACTAGGTCAAGAG 57.860 50.000 0.00 0.00 41.55 2.85
2687 6137 3.015327 GAGGTACTAGGTCAAGAGCGAA 58.985 50.000 0.00 0.00 41.55 4.70
2828 6281 7.439056 GCAAAATTATGGGTTATGACATCCTTG 59.561 37.037 0.00 0.00 0.00 3.61
2921 6374 8.977267 AGAATTTAATCCAGAGAGATTTGAGG 57.023 34.615 0.00 0.00 37.62 3.86
3265 6727 8.900983 AGAATAAGAGCTCATGGAATAACTTC 57.099 34.615 17.77 4.18 0.00 3.01
3271 6733 5.564550 AGCTCATGGAATAACTTCTTGTGT 58.435 37.500 0.00 0.00 0.00 3.72
3337 6800 6.578163 TTAAATTTCAACTTTCTACCGGGG 57.422 37.500 6.32 0.00 0.00 5.73
3510 6973 9.478768 TTTAAATTTTTGTCCTTTATCCGTTCC 57.521 29.630 0.00 0.00 0.00 3.62
3588 7051 6.099341 GTGTTGGTTTCTATTGGGCTAAATG 58.901 40.000 0.00 0.00 0.00 2.32
3617 7080 9.219603 CTACTTTGACATCTATCAAGTTTTGGA 57.780 33.333 0.00 0.00 39.68 3.53
3661 7124 2.364324 CAACCGGGCTAGCTAACTATGA 59.636 50.000 15.72 0.00 0.00 2.15
3739 7218 1.402787 CCACCAGATATTTGGCACCC 58.597 55.000 12.14 0.00 42.18 4.61
3743 7222 4.214310 CACCAGATATTTGGCACCCATAA 58.786 43.478 12.14 0.00 42.18 1.90
3839 7318 2.034053 TCGGGTGTTGTTTTCTGCATTC 59.966 45.455 0.00 0.00 0.00 2.67
3925 7412 5.104360 AGGTCAAAAGCTATTAGGCATCTGA 60.104 40.000 0.00 0.00 34.17 3.27
3959 7565 1.985159 AGTCTTATGAGCCCCACACAA 59.015 47.619 0.00 0.00 0.00 3.33
4064 7670 8.316214 CACCTAACTAATTACAAGGTCTTGGTA 58.684 37.037 14.29 3.25 44.45 3.25
4080 7686 5.065731 GTCTTGGTAATGCTTCAAGATGAGG 59.934 44.000 8.01 0.00 45.46 3.86
4084 7690 4.625800 GCTTCAAGATGAGGCCGT 57.374 55.556 0.00 0.00 42.78 5.68
4085 7691 2.093216 GCTTCAAGATGAGGCCGTG 58.907 57.895 0.00 0.00 42.78 4.94
4086 7692 1.372087 GCTTCAAGATGAGGCCGTGG 61.372 60.000 0.00 0.00 42.78 4.94
4087 7693 1.372087 CTTCAAGATGAGGCCGTGGC 61.372 60.000 1.16 1.16 41.06 5.01
4088 7694 3.197790 CAAGATGAGGCCGTGGCG 61.198 66.667 4.53 0.00 43.06 5.69
4089 7695 3.706373 AAGATGAGGCCGTGGCGT 61.706 61.111 5.66 5.66 43.06 5.68
4090 7696 3.958147 AAGATGAGGCCGTGGCGTG 62.958 63.158 11.32 0.00 43.06 5.34
4097 7703 4.114997 GCCGTGGCGTGGGATTTG 62.115 66.667 0.00 0.00 0.00 2.32
4098 7704 3.439540 CCGTGGCGTGGGATTTGG 61.440 66.667 0.00 0.00 0.00 3.28
4099 7705 2.671619 CGTGGCGTGGGATTTGGT 60.672 61.111 0.00 0.00 0.00 3.67
4100 7706 2.265182 CGTGGCGTGGGATTTGGTT 61.265 57.895 0.00 0.00 0.00 3.67
4101 7707 1.801309 CGTGGCGTGGGATTTGGTTT 61.801 55.000 0.00 0.00 0.00 3.27
4102 7708 0.319469 GTGGCGTGGGATTTGGTTTG 60.319 55.000 0.00 0.00 0.00 2.93
4103 7709 1.374125 GGCGTGGGATTTGGTTTGC 60.374 57.895 0.00 0.00 0.00 3.68
4104 7710 1.374125 GCGTGGGATTTGGTTTGCC 60.374 57.895 0.00 0.00 0.00 4.52
4105 7711 1.080839 CGTGGGATTTGGTTTGCCG 60.081 57.895 0.00 0.00 37.67 5.69
4106 7712 1.374125 GTGGGATTTGGTTTGCCGC 60.374 57.895 0.00 0.00 37.67 6.53
4107 7713 2.264480 GGGATTTGGTTTGCCGCC 59.736 61.111 0.00 0.00 37.67 6.13
4108 7714 2.264480 GGATTTGGTTTGCCGCCC 59.736 61.111 0.00 0.00 37.67 6.13
4109 7715 2.282783 GGATTTGGTTTGCCGCCCT 61.283 57.895 0.00 0.00 37.67 5.19
4110 7716 0.968393 GGATTTGGTTTGCCGCCCTA 60.968 55.000 0.00 0.00 37.67 3.53
4111 7717 0.455815 GATTTGGTTTGCCGCCCTAG 59.544 55.000 0.00 0.00 37.67 3.02
4112 7718 0.970427 ATTTGGTTTGCCGCCCTAGG 60.970 55.000 0.06 0.06 37.67 3.02
4113 7719 2.360439 TTTGGTTTGCCGCCCTAGGT 62.360 55.000 8.29 0.00 37.67 3.08
4114 7720 2.750237 GGTTTGCCGCCCTAGGTG 60.750 66.667 8.29 0.05 0.00 4.00
4135 7741 2.728817 CGGAGGACTCGGCATACC 59.271 66.667 0.00 0.00 0.00 2.73
4136 7742 2.125326 CGGAGGACTCGGCATACCA 61.125 63.158 0.00 0.00 34.57 3.25
4137 7743 1.672854 CGGAGGACTCGGCATACCAA 61.673 60.000 0.00 0.00 34.57 3.67
4138 7744 0.539986 GGAGGACTCGGCATACCAAA 59.460 55.000 0.00 0.00 34.57 3.28
4139 7745 1.141053 GGAGGACTCGGCATACCAAAT 59.859 52.381 0.00 0.00 34.57 2.32
4140 7746 2.421529 GGAGGACTCGGCATACCAAATT 60.422 50.000 0.00 0.00 34.57 1.82
4141 7747 3.279434 GAGGACTCGGCATACCAAATTT 58.721 45.455 0.00 0.00 34.57 1.82
4142 7748 3.016736 AGGACTCGGCATACCAAATTTG 58.983 45.455 11.40 11.40 34.57 2.32
4143 7749 3.013921 GGACTCGGCATACCAAATTTGA 58.986 45.455 19.86 0.52 34.57 2.69
4144 7750 3.065371 GGACTCGGCATACCAAATTTGAG 59.935 47.826 19.86 11.74 34.57 3.02
4145 7751 3.016736 ACTCGGCATACCAAATTTGAGG 58.983 45.455 19.86 6.38 34.57 3.86
4146 7752 3.016736 CTCGGCATACCAAATTTGAGGT 58.983 45.455 19.86 12.17 41.89 3.85
4147 7753 2.752354 TCGGCATACCAAATTTGAGGTG 59.248 45.455 19.86 14.19 38.87 4.00
4148 7754 2.159254 CGGCATACCAAATTTGAGGTGG 60.159 50.000 19.86 5.63 38.87 4.61
4150 7756 3.260632 GGCATACCAAATTTGAGGTGGTT 59.739 43.478 19.86 0.00 43.19 3.67
4151 7757 4.244862 GCATACCAAATTTGAGGTGGTTG 58.755 43.478 19.86 10.66 43.19 3.77
4152 7758 4.021544 GCATACCAAATTTGAGGTGGTTGA 60.022 41.667 19.86 0.00 43.19 3.18
4153 7759 5.510520 GCATACCAAATTTGAGGTGGTTGAA 60.511 40.000 19.86 0.00 43.19 2.69
4154 7760 4.400529 ACCAAATTTGAGGTGGTTGAAC 57.599 40.909 19.86 0.00 43.19 3.18
4155 7761 3.772025 ACCAAATTTGAGGTGGTTGAACA 59.228 39.130 19.86 0.00 43.19 3.18
4156 7762 4.408596 ACCAAATTTGAGGTGGTTGAACAT 59.591 37.500 19.86 0.00 43.19 2.71
4157 7763 4.990426 CCAAATTTGAGGTGGTTGAACATC 59.010 41.667 19.86 0.00 0.00 3.06
4158 7764 4.503741 AATTTGAGGTGGTTGAACATCG 57.496 40.909 0.00 0.00 33.62 3.84
4159 7765 1.234821 TTGAGGTGGTTGAACATCGC 58.765 50.000 0.00 0.00 33.62 4.58
4160 7766 0.107643 TGAGGTGGTTGAACATCGCA 59.892 50.000 0.00 0.00 33.62 5.10
4161 7767 1.234821 GAGGTGGTTGAACATCGCAA 58.765 50.000 0.00 0.00 0.00 4.85
4162 7768 1.812571 GAGGTGGTTGAACATCGCAAT 59.187 47.619 0.00 0.00 0.00 3.56
4163 7769 1.541147 AGGTGGTTGAACATCGCAATG 59.459 47.619 0.00 0.00 38.93 2.82
4164 7770 1.539388 GGTGGTTGAACATCGCAATGA 59.461 47.619 0.00 0.00 36.67 2.57
4165 7771 2.164219 GGTGGTTGAACATCGCAATGAT 59.836 45.455 0.00 0.00 38.01 2.45
4173 7779 3.739703 ATCGCAATGATGGCCAGAT 57.260 47.368 13.05 3.22 35.45 2.90
4174 7780 1.244816 ATCGCAATGATGGCCAGATG 58.755 50.000 13.05 8.53 35.45 2.90
4175 7781 0.820482 TCGCAATGATGGCCAGATGG 60.820 55.000 13.05 4.42 38.53 3.51
4185 7791 2.203070 CCAGATGGCCGTGGCTAC 60.203 66.667 0.00 2.91 41.60 3.58
4186 7792 2.584064 CAGATGGCCGTGGCTACA 59.416 61.111 0.00 1.28 41.60 2.74
4187 7793 1.078497 CAGATGGCCGTGGCTACAA 60.078 57.895 0.00 0.00 41.60 2.41
4188 7794 1.078426 AGATGGCCGTGGCTACAAC 60.078 57.895 0.00 0.21 41.60 3.32
4189 7795 2.435938 ATGGCCGTGGCTACAACG 60.436 61.111 11.25 0.00 41.60 4.10
4190 7796 3.248446 ATGGCCGTGGCTACAACGT 62.248 57.895 11.25 0.00 41.60 3.99
4191 7797 1.890625 ATGGCCGTGGCTACAACGTA 61.891 55.000 11.25 0.00 41.60 3.57
4192 7798 2.096442 GGCCGTGGCTACAACGTAC 61.096 63.158 11.25 0.00 41.60 3.67
4193 7799 2.438954 GCCGTGGCTACAACGTACG 61.439 63.158 15.01 15.01 38.26 3.67
4194 7800 1.802715 CCGTGGCTACAACGTACGG 60.803 63.158 21.06 9.19 46.66 4.02
4195 7801 1.209898 CGTGGCTACAACGTACGGA 59.790 57.895 21.06 0.65 0.00 4.69
4196 7802 0.179156 CGTGGCTACAACGTACGGAT 60.179 55.000 21.06 4.99 0.00 4.18
4197 7803 1.553308 GTGGCTACAACGTACGGATC 58.447 55.000 21.06 2.19 0.00 3.36
4198 7804 1.135315 GTGGCTACAACGTACGGATCA 60.135 52.381 21.06 5.06 0.00 2.92
4199 7805 1.752498 TGGCTACAACGTACGGATCAT 59.248 47.619 21.06 2.69 0.00 2.45
4200 7806 2.950975 TGGCTACAACGTACGGATCATA 59.049 45.455 21.06 3.75 0.00 2.15
4201 7807 3.243168 TGGCTACAACGTACGGATCATAC 60.243 47.826 21.06 5.54 0.00 2.39
4202 7808 3.243168 GGCTACAACGTACGGATCATACA 60.243 47.826 21.06 0.00 0.00 2.29
4203 7809 4.353737 GCTACAACGTACGGATCATACAA 58.646 43.478 21.06 0.00 0.00 2.41
4204 7810 4.440103 GCTACAACGTACGGATCATACAAG 59.560 45.833 21.06 5.36 0.00 3.16
4205 7811 4.707030 ACAACGTACGGATCATACAAGA 57.293 40.909 21.06 0.00 0.00 3.02
4206 7812 4.418392 ACAACGTACGGATCATACAAGAC 58.582 43.478 21.06 0.00 0.00 3.01
4207 7813 3.705043 ACGTACGGATCATACAAGACC 57.295 47.619 21.06 0.00 0.00 3.85
4208 7814 3.018856 ACGTACGGATCATACAAGACCA 58.981 45.455 21.06 0.00 0.00 4.02
4209 7815 3.635373 ACGTACGGATCATACAAGACCAT 59.365 43.478 21.06 0.00 0.00 3.55
4210 7816 3.981416 CGTACGGATCATACAAGACCATG 59.019 47.826 7.57 0.00 0.00 3.66
4211 7817 3.475566 ACGGATCATACAAGACCATGG 57.524 47.619 11.19 11.19 0.00 3.66
4212 7818 2.104792 ACGGATCATACAAGACCATGGG 59.895 50.000 18.09 0.00 0.00 4.00
4213 7819 2.508526 GGATCATACAAGACCATGGGC 58.491 52.381 18.09 14.76 0.00 5.36
4214 7820 2.158623 GGATCATACAAGACCATGGGCA 60.159 50.000 22.78 0.00 0.00 5.36
4215 7821 2.715749 TCATACAAGACCATGGGCAG 57.284 50.000 22.78 14.83 0.00 4.85
4216 7822 2.195727 TCATACAAGACCATGGGCAGA 58.804 47.619 22.78 4.53 0.00 4.26
4217 7823 2.779430 TCATACAAGACCATGGGCAGAT 59.221 45.455 22.78 6.54 0.00 2.90
4218 7824 3.202818 TCATACAAGACCATGGGCAGATT 59.797 43.478 22.78 1.67 0.00 2.40
4219 7825 2.134789 ACAAGACCATGGGCAGATTC 57.865 50.000 22.78 4.85 0.00 2.52
4220 7826 1.341383 ACAAGACCATGGGCAGATTCC 60.341 52.381 22.78 0.00 0.00 3.01
4221 7827 1.002069 AAGACCATGGGCAGATTCCA 58.998 50.000 22.78 0.00 38.82 3.53
4222 7828 1.002069 AGACCATGGGCAGATTCCAA 58.998 50.000 22.78 0.00 37.87 3.53
4223 7829 1.358787 AGACCATGGGCAGATTCCAAA 59.641 47.619 22.78 0.00 37.87 3.28
4224 7830 2.023695 AGACCATGGGCAGATTCCAAAT 60.024 45.455 22.78 0.00 37.87 2.32
4225 7831 2.363359 GACCATGGGCAGATTCCAAATC 59.637 50.000 14.59 0.00 37.87 2.17
4226 7832 1.338973 CCATGGGCAGATTCCAAATCG 59.661 52.381 2.85 0.00 37.87 3.34
4227 7833 1.035139 ATGGGCAGATTCCAAATCGC 58.965 50.000 0.00 7.50 37.87 4.58
4228 7834 0.323269 TGGGCAGATTCCAAATCGCA 60.323 50.000 13.99 0.00 0.00 5.10
4229 7835 0.817013 GGGCAGATTCCAAATCGCAA 59.183 50.000 13.99 0.00 0.00 4.85
4230 7836 1.410153 GGGCAGATTCCAAATCGCAAT 59.590 47.619 13.99 0.00 0.00 3.56
4231 7837 2.544486 GGGCAGATTCCAAATCGCAATC 60.544 50.000 13.99 0.00 0.00 2.67
4232 7838 2.544486 GGCAGATTCCAAATCGCAATCC 60.544 50.000 13.99 2.92 0.00 3.01
4233 7839 2.544486 GCAGATTCCAAATCGCAATCCC 60.544 50.000 9.82 0.00 0.00 3.85
4234 7840 2.689471 CAGATTCCAAATCGCAATCCCA 59.311 45.455 0.00 0.00 0.00 4.37
4235 7841 2.954318 AGATTCCAAATCGCAATCCCAG 59.046 45.455 0.00 0.00 0.00 4.45
4236 7842 0.817013 TTCCAAATCGCAATCCCAGC 59.183 50.000 0.00 0.00 0.00 4.85
4243 7849 2.514824 GCAATCCCAGCGGAGTCC 60.515 66.667 0.00 0.00 43.12 3.85
4244 7850 2.989639 CAATCCCAGCGGAGTCCA 59.010 61.111 10.49 0.00 43.12 4.02
4245 7851 1.153289 CAATCCCAGCGGAGTCCAG 60.153 63.158 10.49 3.25 43.12 3.86
4246 7852 1.306141 AATCCCAGCGGAGTCCAGA 60.306 57.895 10.49 0.00 43.12 3.86
4247 7853 1.333636 AATCCCAGCGGAGTCCAGAG 61.334 60.000 10.49 0.00 43.12 3.35
4248 7854 4.154347 CCCAGCGGAGTCCAGAGC 62.154 72.222 10.49 4.59 0.00 4.09
4249 7855 4.504916 CCAGCGGAGTCCAGAGCG 62.505 72.222 10.49 0.00 34.34 5.03
4252 7858 4.863925 GCGGAGTCCAGAGCGCTC 62.864 72.222 30.01 30.01 0.00 5.03
4253 7859 3.137459 CGGAGTCCAGAGCGCTCT 61.137 66.667 33.83 33.83 41.37 4.09
4254 7860 2.705821 CGGAGTCCAGAGCGCTCTT 61.706 63.158 36.58 22.96 37.98 2.85
4255 7861 1.594310 GGAGTCCAGAGCGCTCTTT 59.406 57.895 36.58 21.68 37.98 2.52
4256 7862 0.459411 GGAGTCCAGAGCGCTCTTTC 60.459 60.000 36.58 27.17 37.98 2.62
4257 7863 0.800300 GAGTCCAGAGCGCTCTTTCG 60.800 60.000 36.58 24.67 37.98 3.46
4275 7881 4.430423 CGCGGCGACAACAGCTTC 62.430 66.667 19.16 0.00 34.52 3.86
4276 7882 3.345808 GCGGCGACAACAGCTTCA 61.346 61.111 12.98 0.00 34.52 3.02
4277 7883 2.856032 CGGCGACAACAGCTTCAG 59.144 61.111 0.00 0.00 34.52 3.02
4278 7884 1.956170 CGGCGACAACAGCTTCAGT 60.956 57.895 0.00 0.00 34.52 3.41
4279 7885 1.571460 GGCGACAACAGCTTCAGTG 59.429 57.895 0.00 0.00 34.52 3.66
4280 7886 1.571460 GCGACAACAGCTTCAGTGG 59.429 57.895 0.00 0.00 0.00 4.00
4281 7887 1.845809 GCGACAACAGCTTCAGTGGG 61.846 60.000 0.00 0.00 0.00 4.61
4282 7888 1.230635 CGACAACAGCTTCAGTGGGG 61.231 60.000 0.00 0.00 0.00 4.96
4283 7889 1.518903 GACAACAGCTTCAGTGGGGC 61.519 60.000 0.00 0.00 0.00 5.80
4284 7890 1.529010 CAACAGCTTCAGTGGGGCA 60.529 57.895 10.02 0.00 0.00 5.36
4285 7891 0.896940 CAACAGCTTCAGTGGGGCAT 60.897 55.000 10.02 0.00 0.00 4.40
4286 7892 0.896940 AACAGCTTCAGTGGGGCATG 60.897 55.000 10.02 0.00 0.00 4.06
4287 7893 2.050350 CAGCTTCAGTGGGGCATGG 61.050 63.158 10.02 0.00 0.00 3.66
4288 7894 2.757099 GCTTCAGTGGGGCATGGG 60.757 66.667 0.00 0.00 0.00 4.00
4289 7895 2.757099 CTTCAGTGGGGCATGGGC 60.757 66.667 0.00 0.00 40.13 5.36
4290 7896 3.588511 TTCAGTGGGGCATGGGCA 61.589 61.111 0.00 0.00 43.71 5.36
4291 7897 3.157733 TTCAGTGGGGCATGGGCAA 62.158 57.895 0.00 0.00 43.71 4.52
4292 7898 3.072468 CAGTGGGGCATGGGCAAG 61.072 66.667 0.00 0.00 43.71 4.01
4293 7899 3.267233 AGTGGGGCATGGGCAAGA 61.267 61.111 0.00 0.00 43.71 3.02
4294 7900 3.070576 GTGGGGCATGGGCAAGAC 61.071 66.667 0.00 0.00 43.71 3.01
4295 7901 3.588511 TGGGGCATGGGCAAGACA 61.589 61.111 0.00 0.00 43.71 3.41
4296 7902 2.042639 GGGGCATGGGCAAGACAT 60.043 61.111 0.00 0.00 43.71 3.06
4297 7903 1.229927 GGGGCATGGGCAAGACATA 59.770 57.895 0.00 0.00 43.71 2.29
4298 7904 1.109323 GGGGCATGGGCAAGACATAC 61.109 60.000 0.00 0.00 43.71 2.39
4299 7905 1.447317 GGGCATGGGCAAGACATACG 61.447 60.000 0.00 0.00 43.71 3.06
4300 7906 0.748005 GGCATGGGCAAGACATACGT 60.748 55.000 0.00 0.00 43.71 3.57
4301 7907 1.094785 GCATGGGCAAGACATACGTT 58.905 50.000 0.00 0.00 40.72 3.99
4302 7908 1.472480 GCATGGGCAAGACATACGTTT 59.528 47.619 0.00 0.00 40.72 3.60
4303 7909 2.094752 GCATGGGCAAGACATACGTTTT 60.095 45.455 0.00 0.00 40.72 2.43
4304 7910 3.613910 GCATGGGCAAGACATACGTTTTT 60.614 43.478 0.00 0.00 40.72 1.94
4305 7911 3.634568 TGGGCAAGACATACGTTTTTG 57.365 42.857 0.00 0.00 0.00 2.44
4306 7912 2.294791 TGGGCAAGACATACGTTTTTGG 59.705 45.455 0.00 0.00 0.00 3.28
4307 7913 2.352323 GGGCAAGACATACGTTTTTGGG 60.352 50.000 0.00 0.00 0.00 4.12
4308 7914 2.554893 GGCAAGACATACGTTTTTGGGA 59.445 45.455 0.00 0.00 0.00 4.37
4309 7915 3.004944 GGCAAGACATACGTTTTTGGGAA 59.995 43.478 0.00 0.00 0.00 3.97
4310 7916 4.226761 GCAAGACATACGTTTTTGGGAAG 58.773 43.478 0.00 0.00 0.00 3.46
4311 7917 4.023536 GCAAGACATACGTTTTTGGGAAGA 60.024 41.667 0.00 0.00 0.00 2.87
4312 7918 5.449304 CAAGACATACGTTTTTGGGAAGAC 58.551 41.667 0.00 0.00 0.00 3.01
4313 7919 4.710324 AGACATACGTTTTTGGGAAGACA 58.290 39.130 0.00 0.00 0.00 3.41
4314 7920 5.127491 AGACATACGTTTTTGGGAAGACAA 58.873 37.500 0.00 0.00 0.00 3.18
4315 7921 5.238650 AGACATACGTTTTTGGGAAGACAAG 59.761 40.000 0.00 0.00 0.00 3.16
4316 7922 4.885325 ACATACGTTTTTGGGAAGACAAGT 59.115 37.500 0.00 0.00 0.00 3.16
4317 7923 3.775661 ACGTTTTTGGGAAGACAAGTG 57.224 42.857 0.00 0.00 0.00 3.16
4318 7924 2.425668 ACGTTTTTGGGAAGACAAGTGG 59.574 45.455 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 4.081309 CCCTCCATCCGAGTAGTGTAAAAA 60.081 45.833 0.00 0.00 36.82 1.94
13 14 1.848388 TCCCTCCATCCGAGTAGTGTA 59.152 52.381 0.00 0.00 36.82 2.90
14 15 0.629596 TCCCTCCATCCGAGTAGTGT 59.370 55.000 0.00 0.00 36.82 3.55
15 16 1.323412 CTCCCTCCATCCGAGTAGTG 58.677 60.000 0.00 0.00 36.82 2.74
23 24 5.703310 TCTAGTTAACTACTCCCTCCATCC 58.297 45.833 11.38 0.00 38.33 3.51
25 26 7.133483 ACATTCTAGTTAACTACTCCCTCCAT 58.867 38.462 11.38 0.00 38.33 3.41
33 34 7.973048 TGGGATGACATTCTAGTTAACTACT 57.027 36.000 11.38 0.00 41.04 2.57
48 49 9.482627 GTTGTAATTAATTGTTTTGGGATGACA 57.517 29.630 11.05 0.00 0.00 3.58
49 50 9.705290 AGTTGTAATTAATTGTTTTGGGATGAC 57.295 29.630 11.05 0.00 0.00 3.06
138 140 1.471119 ACGAGTATTCCGCTGGAGAA 58.529 50.000 0.00 0.00 31.21 2.87
212 217 9.619316 GCATTTTAATATTCCGTACAATGCATA 57.381 29.630 0.00 0.00 43.05 3.14
262 268 5.894298 TTACTCCTGCATAGGTCAATCAT 57.106 39.130 0.00 0.00 44.88 2.45
386 393 1.979155 CGCCTCACTCCTCCTCACA 60.979 63.158 0.00 0.00 0.00 3.58
400 409 3.941188 CCAGTCACCACCACGCCT 61.941 66.667 0.00 0.00 0.00 5.52
520 529 2.361119 TCGTTCATCCTTATCTCCCACG 59.639 50.000 0.00 0.00 0.00 4.94
713 732 2.477845 GCCAAAAGTGATGGGCATTT 57.522 45.000 0.00 0.00 45.70 2.32
725 744 2.916716 GCATCACGTGTATTGCCAAAAG 59.083 45.455 21.78 0.00 0.00 2.27
769 798 5.167845 AGAAAACAACAAACACATCACACC 58.832 37.500 0.00 0.00 0.00 4.16
818 847 4.053983 CTGATGGATCACGTTATCACAGG 58.946 47.826 11.62 0.46 32.50 4.00
849 878 2.087646 GCCTCACTTGGTCAGAAATCC 58.912 52.381 0.00 0.00 0.00 3.01
986 1092 1.572941 CGAGTGGTCAGTTCGTCGA 59.427 57.895 0.00 0.00 0.00 4.20
988 1094 0.596600 TTGCGAGTGGTCAGTTCGTC 60.597 55.000 0.00 1.91 36.74 4.20
1621 1760 4.161295 TCCATGGCGCGGAGGAAG 62.161 66.667 8.83 0.00 0.00 3.46
1672 1811 3.999701 GACGGGAAGAGGTCGACT 58.000 61.111 16.46 0.90 0.00 4.18
1696 1835 3.699894 CTGAGCCTCCGCACCAGT 61.700 66.667 0.00 0.00 37.52 4.00
1706 1845 2.124819 CTCGCCATTGCTGAGCCT 60.125 61.111 0.23 0.00 33.63 4.58
1960 2189 5.009110 TGACGAAGAGGTCACATATGAGATC 59.991 44.000 10.38 7.58 41.76 2.75
1962 2191 4.270008 TGACGAAGAGGTCACATATGAGA 58.730 43.478 10.38 3.86 41.76 3.27
1963 2192 4.639135 TGACGAAGAGGTCACATATGAG 57.361 45.455 10.38 0.87 41.76 2.90
1989 2220 5.468072 CCTAGCTATGATGTTAACTTGCCTG 59.532 44.000 7.22 0.00 0.00 4.85
1999 2836 5.599999 ACGAGAAACCTAGCTATGATGTT 57.400 39.130 2.75 0.00 0.00 2.71
2002 2839 6.222038 TGAAACGAGAAACCTAGCTATGAT 57.778 37.500 2.75 0.00 0.00 2.45
2003 2840 5.654603 TGAAACGAGAAACCTAGCTATGA 57.345 39.130 2.75 0.00 0.00 2.15
2005 2842 7.739498 TTTTTGAAACGAGAAACCTAGCTAT 57.261 32.000 0.00 0.00 0.00 2.97
2031 2868 7.665559 TGTGAGAAACCTAGCTATGATGTTTTT 59.334 33.333 2.75 2.84 29.89 1.94
2032 2869 7.168219 TGTGAGAAACCTAGCTATGATGTTTT 58.832 34.615 2.75 0.00 29.89 2.43
2033 2870 6.711277 TGTGAGAAACCTAGCTATGATGTTT 58.289 36.000 2.75 6.75 32.23 2.83
2125 3092 8.842358 ACTATTTCCTCTCGTGTTGATAAAAA 57.158 30.769 0.00 0.00 0.00 1.94
2159 4031 4.026356 ACACTCTTTCAAGAATGGAGGG 57.974 45.455 3.26 11.41 36.64 4.30
2161 4033 7.736447 AAAGTACACTCTTTCAAGAATGGAG 57.264 36.000 3.26 9.95 36.64 3.86
2172 4044 7.175990 TCCAACAAAGTTGAAAGTACACTCTTT 59.824 33.333 11.19 0.00 39.87 2.52
2173 4045 6.657541 TCCAACAAAGTTGAAAGTACACTCTT 59.342 34.615 11.19 0.00 0.00 2.85
2174 4046 6.177610 TCCAACAAAGTTGAAAGTACACTCT 58.822 36.000 11.19 0.00 0.00 3.24
2175 4047 6.431198 TCCAACAAAGTTGAAAGTACACTC 57.569 37.500 11.19 0.00 0.00 3.51
2176 4048 6.827586 TTCCAACAAAGTTGAAAGTACACT 57.172 33.333 11.19 0.00 0.00 3.55
2177 4049 7.088272 ACTTTCCAACAAAGTTGAAAGTACAC 58.912 34.615 23.17 0.00 39.93 2.90
2178 4050 7.040340 TGACTTTCCAACAAAGTTGAAAGTACA 60.040 33.333 23.79 20.98 41.21 2.90
2179 4051 7.309920 TGACTTTCCAACAAAGTTGAAAGTAC 58.690 34.615 23.79 19.79 41.21 2.73
2180 4052 7.455641 TGACTTTCCAACAAAGTTGAAAGTA 57.544 32.000 23.79 16.20 41.21 2.24
2181 4053 6.339587 TGACTTTCCAACAAAGTTGAAAGT 57.660 33.333 23.88 23.88 43.00 2.66
2182 4054 7.650834 TTTGACTTTCCAACAAAGTTGAAAG 57.349 32.000 20.37 20.37 40.27 2.62
2183 4055 8.438676 TTTTTGACTTTCCAACAAAGTTGAAA 57.561 26.923 11.19 8.66 40.27 2.69
2233 4105 8.532186 TGGCATAAATGTTGGTCTATTATTGT 57.468 30.769 0.00 0.00 0.00 2.71
2234 4106 9.630098 GATGGCATAAATGTTGGTCTATTATTG 57.370 33.333 0.00 0.00 0.00 1.90
2235 4107 9.365906 TGATGGCATAAATGTTGGTCTATTATT 57.634 29.630 0.00 0.00 0.00 1.40
2236 4108 8.938801 TGATGGCATAAATGTTGGTCTATTAT 57.061 30.769 0.00 0.00 0.00 1.28
2238 4110 7.658525 TTGATGGCATAAATGTTGGTCTATT 57.341 32.000 0.00 0.00 0.00 1.73
2239 4111 7.658525 TTTGATGGCATAAATGTTGGTCTAT 57.341 32.000 0.00 0.00 0.00 1.98
2240 4112 7.658525 ATTTGATGGCATAAATGTTGGTCTA 57.341 32.000 0.00 0.00 0.00 2.59
2241 4113 5.999205 TTTGATGGCATAAATGTTGGTCT 57.001 34.783 0.00 0.00 0.00 3.85
2323 4195 9.807649 GAGTTTGTGGAAAAATATATCAATGCT 57.192 29.630 0.00 0.00 0.00 3.79
2324 4196 8.745837 CGAGTTTGTGGAAAAATATATCAATGC 58.254 33.333 0.00 0.00 0.00 3.56
2325 4197 9.236691 CCGAGTTTGTGGAAAAATATATCAATG 57.763 33.333 0.00 0.00 0.00 2.82
2326 4198 8.966868 ACCGAGTTTGTGGAAAAATATATCAAT 58.033 29.630 0.00 0.00 0.00 2.57
2327 4199 8.343168 ACCGAGTTTGTGGAAAAATATATCAA 57.657 30.769 0.00 0.00 0.00 2.57
2328 4200 7.608376 TGACCGAGTTTGTGGAAAAATATATCA 59.392 33.333 0.00 0.00 0.00 2.15
2329 4201 7.981142 TGACCGAGTTTGTGGAAAAATATATC 58.019 34.615 0.00 0.00 0.00 1.63
2330 4202 7.931578 TGACCGAGTTTGTGGAAAAATATAT 57.068 32.000 0.00 0.00 0.00 0.86
2331 4203 7.747155 TTGACCGAGTTTGTGGAAAAATATA 57.253 32.000 0.00 0.00 0.00 0.86
2332 4204 6.642707 TTGACCGAGTTTGTGGAAAAATAT 57.357 33.333 0.00 0.00 0.00 1.28
2333 4205 6.095720 AGTTTGACCGAGTTTGTGGAAAAATA 59.904 34.615 0.00 0.00 0.00 1.40
2334 4206 4.993029 TTGACCGAGTTTGTGGAAAAAT 57.007 36.364 0.00 0.00 0.00 1.82
2335 4207 4.218852 AGTTTGACCGAGTTTGTGGAAAAA 59.781 37.500 0.00 0.00 0.00 1.94
2336 4208 3.759618 AGTTTGACCGAGTTTGTGGAAAA 59.240 39.130 0.00 0.00 0.00 2.29
2337 4209 3.349022 AGTTTGACCGAGTTTGTGGAAA 58.651 40.909 0.00 0.00 0.00 3.13
2338 4210 2.993937 AGTTTGACCGAGTTTGTGGAA 58.006 42.857 0.00 0.00 0.00 3.53
2339 4211 2.702592 AGTTTGACCGAGTTTGTGGA 57.297 45.000 0.00 0.00 0.00 4.02
2340 4212 3.127895 TCAAAGTTTGACCGAGTTTGTGG 59.872 43.478 14.35 0.00 38.17 4.17
2341 4213 4.094294 TCTCAAAGTTTGACCGAGTTTGTG 59.906 41.667 14.35 1.47 38.17 3.33
2342 4214 4.258543 TCTCAAAGTTTGACCGAGTTTGT 58.741 39.130 14.35 0.00 38.17 2.83
2343 4215 4.875544 TCTCAAAGTTTGACCGAGTTTG 57.124 40.909 14.35 2.86 38.28 2.93
2344 4216 7.745620 ATTATCTCAAAGTTTGACCGAGTTT 57.254 32.000 14.35 0.45 35.46 2.66
2345 4217 7.745620 AATTATCTCAAAGTTTGACCGAGTT 57.254 32.000 14.35 4.91 35.46 3.01
2346 4218 7.444183 TCAAATTATCTCAAAGTTTGACCGAGT 59.556 33.333 14.35 5.10 34.82 4.18
2347 4219 7.746475 GTCAAATTATCTCAAAGTTTGACCGAG 59.254 37.037 14.35 5.32 46.32 4.63
2348 4220 7.581476 GTCAAATTATCTCAAAGTTTGACCGA 58.419 34.615 14.35 11.50 46.32 4.69
2349 4221 7.781763 GTCAAATTATCTCAAAGTTTGACCG 57.218 36.000 14.35 6.38 46.32 4.79
2352 4224 7.176690 GGAGGGTCAAATTATCTCAAAGTTTGA 59.823 37.037 17.16 17.16 36.69 2.69
2353 4225 7.039784 TGGAGGGTCAAATTATCTCAAAGTTTG 60.040 37.037 9.44 9.44 0.00 2.93
2354 4226 7.010160 TGGAGGGTCAAATTATCTCAAAGTTT 58.990 34.615 0.00 0.00 0.00 2.66
2355 4227 6.552008 TGGAGGGTCAAATTATCTCAAAGTT 58.448 36.000 0.00 0.00 0.00 2.66
2356 4228 6.139679 TGGAGGGTCAAATTATCTCAAAGT 57.860 37.500 0.00 0.00 0.00 2.66
2357 4229 6.434028 TGTTGGAGGGTCAAATTATCTCAAAG 59.566 38.462 0.00 0.00 0.00 2.77
2358 4230 6.310941 TGTTGGAGGGTCAAATTATCTCAAA 58.689 36.000 0.00 0.00 0.00 2.69
2359 4231 5.886609 TGTTGGAGGGTCAAATTATCTCAA 58.113 37.500 0.00 0.00 0.00 3.02
2360 4232 5.512942 TGTTGGAGGGTCAAATTATCTCA 57.487 39.130 0.00 0.00 0.00 3.27
2361 4233 6.434340 ACTTTGTTGGAGGGTCAAATTATCTC 59.566 38.462 0.00 0.00 32.04 2.75
2362 4234 6.314917 ACTTTGTTGGAGGGTCAAATTATCT 58.685 36.000 0.00 0.00 32.04 1.98
2363 4235 6.590234 ACTTTGTTGGAGGGTCAAATTATC 57.410 37.500 0.00 0.00 32.04 1.75
2364 4236 6.239572 CCAACTTTGTTGGAGGGTCAAATTAT 60.240 38.462 21.06 0.00 42.06 1.28
2365 4237 5.069781 CCAACTTTGTTGGAGGGTCAAATTA 59.930 40.000 21.06 0.00 42.06 1.40
2366 4238 4.141733 CCAACTTTGTTGGAGGGTCAAATT 60.142 41.667 21.06 0.00 42.06 1.82
2367 4239 3.387699 CCAACTTTGTTGGAGGGTCAAAT 59.612 43.478 21.06 0.00 42.06 2.32
2368 4240 2.763448 CCAACTTTGTTGGAGGGTCAAA 59.237 45.455 21.06 0.00 42.06 2.69
2369 4241 2.024846 TCCAACTTTGTTGGAGGGTCAA 60.025 45.455 23.38 4.76 43.17 3.18
2370 4242 1.566703 TCCAACTTTGTTGGAGGGTCA 59.433 47.619 23.38 5.39 43.17 4.02
2371 4243 2.358322 TCCAACTTTGTTGGAGGGTC 57.642 50.000 23.38 0.00 43.17 4.46
2376 4248 4.850680 AGTGTACTTCCAACTTTGTTGGA 58.149 39.130 23.38 23.38 46.08 3.53
2377 4249 4.881850 AGAGTGTACTTCCAACTTTGTTGG 59.118 41.667 19.97 19.97 40.87 3.77
2378 4250 6.436843 AAGAGTGTACTTCCAACTTTGTTG 57.563 37.500 3.69 3.69 0.00 3.33
2379 4251 7.462571 AAAAGAGTGTACTTCCAACTTTGTT 57.537 32.000 0.00 0.00 0.00 2.83
2380 4252 8.570068 TTAAAAGAGTGTACTTCCAACTTTGT 57.430 30.769 0.00 0.00 0.00 2.83
2381 4253 8.129211 CCTTAAAAGAGTGTACTTCCAACTTTG 58.871 37.037 0.00 0.00 0.00 2.77
2382 4254 8.050930 TCCTTAAAAGAGTGTACTTCCAACTTT 58.949 33.333 0.00 0.00 0.00 2.66
2383 4255 7.498239 GTCCTTAAAAGAGTGTACTTCCAACTT 59.502 37.037 0.00 0.00 0.00 2.66
2384 4256 6.990939 GTCCTTAAAAGAGTGTACTTCCAACT 59.009 38.462 0.00 0.00 0.00 3.16
2385 4257 6.073927 CGTCCTTAAAAGAGTGTACTTCCAAC 60.074 42.308 0.00 0.00 0.00 3.77
2386 4258 5.987347 CGTCCTTAAAAGAGTGTACTTCCAA 59.013 40.000 0.00 0.00 0.00 3.53
2387 4259 5.510179 CCGTCCTTAAAAGAGTGTACTTCCA 60.510 44.000 0.00 0.00 0.00 3.53
2388 4260 4.928020 CCGTCCTTAAAAGAGTGTACTTCC 59.072 45.833 0.00 0.00 0.00 3.46
2389 4261 5.776744 TCCGTCCTTAAAAGAGTGTACTTC 58.223 41.667 0.00 0.00 0.00 3.01
2390 4262 5.279356 CCTCCGTCCTTAAAAGAGTGTACTT 60.279 44.000 0.00 0.00 0.00 2.24
2391 4263 4.220163 CCTCCGTCCTTAAAAGAGTGTACT 59.780 45.833 0.00 0.00 0.00 2.73
2392 4264 4.492611 CCTCCGTCCTTAAAAGAGTGTAC 58.507 47.826 0.00 0.00 0.00 2.90
2393 4265 3.512724 CCCTCCGTCCTTAAAAGAGTGTA 59.487 47.826 0.00 0.00 0.00 2.90
2394 4266 2.302157 CCCTCCGTCCTTAAAAGAGTGT 59.698 50.000 0.00 0.00 0.00 3.55
2395 4267 2.565834 TCCCTCCGTCCTTAAAAGAGTG 59.434 50.000 0.00 0.00 0.00 3.51
2396 4268 2.832733 CTCCCTCCGTCCTTAAAAGAGT 59.167 50.000 0.00 0.00 0.00 3.24
2397 4269 2.832733 ACTCCCTCCGTCCTTAAAAGAG 59.167 50.000 0.00 0.00 0.00 2.85
2398 4270 2.898662 ACTCCCTCCGTCCTTAAAAGA 58.101 47.619 0.00 0.00 0.00 2.52
2399 4271 3.768215 AGTACTCCCTCCGTCCTTAAAAG 59.232 47.826 0.00 0.00 0.00 2.27
2400 4272 3.782992 AGTACTCCCTCCGTCCTTAAAA 58.217 45.455 0.00 0.00 0.00 1.52
2401 4273 3.463048 AGTACTCCCTCCGTCCTTAAA 57.537 47.619 0.00 0.00 0.00 1.52
2402 4274 3.682718 CGTAGTACTCCCTCCGTCCTTAA 60.683 52.174 0.00 0.00 0.00 1.85
2403 4275 2.158900 CGTAGTACTCCCTCCGTCCTTA 60.159 54.545 0.00 0.00 0.00 2.69
2404 4276 1.407989 CGTAGTACTCCCTCCGTCCTT 60.408 57.143 0.00 0.00 0.00 3.36
2405 4277 0.179936 CGTAGTACTCCCTCCGTCCT 59.820 60.000 0.00 0.00 0.00 3.85
2406 4278 0.107459 ACGTAGTACTCCCTCCGTCC 60.107 60.000 0.00 0.00 41.94 4.79
2407 4279 2.604046 TACGTAGTACTCCCTCCGTC 57.396 55.000 0.00 0.00 45.11 4.79
2439 4311 8.868635 ATATAAGTCGTCTTTGTAGGCTAAAC 57.131 34.615 0.00 0.00 35.36 2.01
2442 4314 9.309516 CAAAATATAAGTCGTCTTTGTAGGCTA 57.690 33.333 0.00 0.00 35.36 3.93
2443 4315 7.280205 CCAAAATATAAGTCGTCTTTGTAGGCT 59.720 37.037 0.00 0.00 35.36 4.58
2444 4316 7.065443 ACCAAAATATAAGTCGTCTTTGTAGGC 59.935 37.037 0.00 0.00 35.36 3.93
2445 4317 8.488651 ACCAAAATATAAGTCGTCTTTGTAGG 57.511 34.615 0.00 0.00 35.36 3.18
2447 4319 9.075519 CGTACCAAAATATAAGTCGTCTTTGTA 57.924 33.333 0.00 0.00 35.36 2.41
2448 4320 7.063780 CCGTACCAAAATATAAGTCGTCTTTGT 59.936 37.037 0.00 0.00 35.36 2.83
2449 4321 7.276218 TCCGTACCAAAATATAAGTCGTCTTTG 59.724 37.037 0.00 0.00 35.36 2.77
2450 4322 7.322664 TCCGTACCAAAATATAAGTCGTCTTT 58.677 34.615 0.00 0.00 35.36 2.52
2451 4323 6.866480 TCCGTACCAAAATATAAGTCGTCTT 58.134 36.000 0.00 0.00 37.65 3.01
2452 4324 6.455360 TCCGTACCAAAATATAAGTCGTCT 57.545 37.500 0.00 0.00 0.00 4.18
2453 4325 5.689068 CCTCCGTACCAAAATATAAGTCGTC 59.311 44.000 0.00 0.00 0.00 4.20
2454 4326 5.127682 ACCTCCGTACCAAAATATAAGTCGT 59.872 40.000 0.00 0.00 0.00 4.34
2455 4327 5.594926 ACCTCCGTACCAAAATATAAGTCG 58.405 41.667 0.00 0.00 0.00 4.18
2456 4328 7.720442 ACTACCTCCGTACCAAAATATAAGTC 58.280 38.462 0.00 0.00 0.00 3.01
2457 4329 7.666063 ACTACCTCCGTACCAAAATATAAGT 57.334 36.000 0.00 0.00 0.00 2.24
2458 4330 8.854117 AGTACTACCTCCGTACCAAAATATAAG 58.146 37.037 0.00 0.00 38.34 1.73
2459 4331 8.766994 AGTACTACCTCCGTACCAAAATATAA 57.233 34.615 0.00 0.00 38.34 0.98
2460 4332 8.766994 AAGTACTACCTCCGTACCAAAATATA 57.233 34.615 0.00 0.00 38.34 0.86
2461 4333 7.342799 TGAAGTACTACCTCCGTACCAAAATAT 59.657 37.037 0.00 0.00 38.34 1.28
2462 4334 6.663093 TGAAGTACTACCTCCGTACCAAAATA 59.337 38.462 0.00 0.00 38.34 1.40
2463 4335 5.481473 TGAAGTACTACCTCCGTACCAAAAT 59.519 40.000 0.00 0.00 38.34 1.82
2464 4336 4.832266 TGAAGTACTACCTCCGTACCAAAA 59.168 41.667 0.00 0.00 38.34 2.44
2465 4337 4.406456 TGAAGTACTACCTCCGTACCAAA 58.594 43.478 0.00 0.00 38.34 3.28
2466 4338 4.032960 TGAAGTACTACCTCCGTACCAA 57.967 45.455 0.00 0.00 38.34 3.67
2467 4339 3.719268 TGAAGTACTACCTCCGTACCA 57.281 47.619 0.00 0.00 38.34 3.25
2468 4340 6.000219 TGATATGAAGTACTACCTCCGTACC 59.000 44.000 0.00 0.00 38.34 3.34
2469 4341 7.228308 ACTTGATATGAAGTACTACCTCCGTAC 59.772 40.741 5.70 0.00 34.29 3.67
2470 4342 7.285566 ACTTGATATGAAGTACTACCTCCGTA 58.714 38.462 5.70 0.00 34.29 4.02
2471 4343 6.127793 ACTTGATATGAAGTACTACCTCCGT 58.872 40.000 5.70 0.00 34.29 4.69
2472 4344 6.636562 ACTTGATATGAAGTACTACCTCCG 57.363 41.667 5.70 0.00 34.29 4.63
2473 4345 8.258708 ACAAACTTGATATGAAGTACTACCTCC 58.741 37.037 8.05 0.00 35.01 4.30
2474 4346 9.654663 AACAAACTTGATATGAAGTACTACCTC 57.345 33.333 8.05 0.00 35.01 3.85
2480 4352 9.944663 TGTCAAAACAAACTTGATATGAAGTAC 57.055 29.630 8.05 1.32 35.01 2.73
2683 6133 4.921515 TCGCTATTGGTAATGATAGTTCGC 59.078 41.667 0.00 0.00 0.00 4.70
2687 6137 6.591834 GCAAGATCGCTATTGGTAATGATAGT 59.408 38.462 0.00 0.00 0.00 2.12
2921 6374 7.068103 TGTCCCATTATAATCCACATTGTTGTC 59.932 37.037 0.00 0.00 32.34 3.18
2977 6430 2.796483 TTCCAGGGCATTGTCGTCGG 62.796 60.000 0.00 0.00 0.00 4.79
3265 6727 5.375417 TTTGGCATGTAATCTGACACAAG 57.625 39.130 0.00 0.00 29.34 3.16
3330 6792 2.607568 TTGGCATGCTTCCCCGGTA 61.608 57.895 18.92 0.00 0.00 4.02
3333 6796 2.008268 GATGTTGGCATGCTTCCCCG 62.008 60.000 18.92 0.00 35.07 5.73
3337 6800 4.818546 ACATAGTAGATGTTGGCATGCTTC 59.181 41.667 18.92 8.84 35.07 3.86
3492 6955 3.791953 TGGGAACGGATAAAGGACAAA 57.208 42.857 0.00 0.00 0.00 2.83
3510 6973 1.003355 AGTGTGCCGGAGACAATGG 60.003 57.895 5.05 0.00 0.00 3.16
3617 7080 8.470002 GTTGAGTCCCTTTCTTTTGCATATATT 58.530 33.333 0.00 0.00 0.00 1.28
3661 7124 5.894298 TTCTTCTGCATATATCTGGTGGT 57.106 39.130 0.00 0.00 0.00 4.16
3738 7217 3.136443 TGGTGGCCATCTAGAACTTATGG 59.864 47.826 18.94 0.02 42.59 2.74
3739 7218 4.101585 TCTGGTGGCCATCTAGAACTTATG 59.898 45.833 18.94 0.00 30.82 1.90
3743 7222 2.254152 TCTGGTGGCCATCTAGAACT 57.746 50.000 18.94 0.00 30.82 3.01
3925 7412 4.115270 GACTCCCTCAAGTCGGGT 57.885 61.111 0.00 0.00 42.56 5.28
4064 7670 1.340405 ACGGCCTCATCTTGAAGCATT 60.340 47.619 0.00 0.00 35.60 3.56
4080 7686 4.114997 CAAATCCCACGCCACGGC 62.115 66.667 0.00 0.00 37.85 5.68
4084 7690 2.045280 CAAACCAAATCCCACGCCA 58.955 52.632 0.00 0.00 0.00 5.69
4085 7691 1.374125 GCAAACCAAATCCCACGCC 60.374 57.895 0.00 0.00 0.00 5.68
4086 7692 1.374125 GGCAAACCAAATCCCACGC 60.374 57.895 0.00 0.00 35.26 5.34
4087 7693 1.080839 CGGCAAACCAAATCCCACG 60.081 57.895 0.00 0.00 34.57 4.94
4088 7694 1.374125 GCGGCAAACCAAATCCCAC 60.374 57.895 0.00 0.00 34.57 4.61
4089 7695 2.578714 GGCGGCAAACCAAATCCCA 61.579 57.895 3.07 0.00 34.57 4.37
4090 7696 2.264480 GGCGGCAAACCAAATCCC 59.736 61.111 3.07 0.00 34.57 3.85
4091 7697 0.968393 TAGGGCGGCAAACCAAATCC 60.968 55.000 12.47 0.00 34.57 3.01
4092 7698 0.455815 CTAGGGCGGCAAACCAAATC 59.544 55.000 12.47 0.00 34.57 2.17
4093 7699 0.970427 CCTAGGGCGGCAAACCAAAT 60.970 55.000 12.47 0.00 34.57 2.32
4094 7700 1.605165 CCTAGGGCGGCAAACCAAA 60.605 57.895 12.47 0.00 34.57 3.28
4095 7701 2.034999 CCTAGGGCGGCAAACCAA 59.965 61.111 12.47 0.00 34.57 3.67
4096 7702 3.253838 ACCTAGGGCGGCAAACCA 61.254 61.111 14.81 0.00 34.57 3.67
4097 7703 2.750237 CACCTAGGGCGGCAAACC 60.750 66.667 14.81 0.00 0.00 3.27
4098 7704 2.750237 CCACCTAGGGCGGCAAAC 60.750 66.667 14.81 0.00 0.00 2.93
4107 7713 4.475444 TCCTCCGGCCCACCTAGG 62.475 72.222 7.41 7.41 37.86 3.02
4108 7714 3.155167 GTCCTCCGGCCCACCTAG 61.155 72.222 0.00 0.00 0.00 3.02
4109 7715 3.674050 GAGTCCTCCGGCCCACCTA 62.674 68.421 0.00 0.00 0.00 3.08
4118 7724 1.672854 TTGGTATGCCGAGTCCTCCG 61.673 60.000 0.00 0.00 37.67 4.63
4119 7725 0.539986 TTTGGTATGCCGAGTCCTCC 59.460 55.000 0.00 0.00 37.67 4.30
4120 7726 2.622064 ATTTGGTATGCCGAGTCCTC 57.378 50.000 0.00 0.00 37.67 3.71
4121 7727 3.016736 CAAATTTGGTATGCCGAGTCCT 58.983 45.455 10.49 0.00 37.67 3.85
4122 7728 3.013921 TCAAATTTGGTATGCCGAGTCC 58.986 45.455 17.90 0.00 37.67 3.85
4123 7729 3.065371 CCTCAAATTTGGTATGCCGAGTC 59.935 47.826 17.90 0.00 37.67 3.36
4124 7730 3.016736 CCTCAAATTTGGTATGCCGAGT 58.983 45.455 17.90 0.00 37.67 4.18
4125 7731 3.016736 ACCTCAAATTTGGTATGCCGAG 58.983 45.455 17.90 5.45 37.67 4.63
4126 7732 2.752354 CACCTCAAATTTGGTATGCCGA 59.248 45.455 17.90 0.00 37.67 5.54
4127 7733 2.159254 CCACCTCAAATTTGGTATGCCG 60.159 50.000 17.90 1.49 37.67 5.69
4128 7734 2.831526 ACCACCTCAAATTTGGTATGCC 59.168 45.455 17.90 0.00 42.04 4.40
4129 7735 4.021544 TCAACCACCTCAAATTTGGTATGC 60.022 41.667 17.90 0.00 43.08 3.14
4130 7736 5.720371 TCAACCACCTCAAATTTGGTATG 57.280 39.130 17.90 12.48 43.08 2.39
4131 7737 5.600484 TGTTCAACCACCTCAAATTTGGTAT 59.400 36.000 17.90 1.10 43.08 2.73
4132 7738 4.956700 TGTTCAACCACCTCAAATTTGGTA 59.043 37.500 17.90 0.00 43.08 3.25
4133 7739 3.772025 TGTTCAACCACCTCAAATTTGGT 59.228 39.130 17.90 6.36 45.95 3.67
4134 7740 4.399004 TGTTCAACCACCTCAAATTTGG 57.601 40.909 17.90 5.69 36.39 3.28
4135 7741 4.681025 CGATGTTCAACCACCTCAAATTTG 59.319 41.667 12.15 12.15 0.00 2.32
4136 7742 4.795962 GCGATGTTCAACCACCTCAAATTT 60.796 41.667 0.00 0.00 0.00 1.82
4137 7743 3.305335 GCGATGTTCAACCACCTCAAATT 60.305 43.478 0.00 0.00 0.00 1.82
4138 7744 2.228822 GCGATGTTCAACCACCTCAAAT 59.771 45.455 0.00 0.00 0.00 2.32
4139 7745 1.606668 GCGATGTTCAACCACCTCAAA 59.393 47.619 0.00 0.00 0.00 2.69
4140 7746 1.234821 GCGATGTTCAACCACCTCAA 58.765 50.000 0.00 0.00 0.00 3.02
4141 7747 0.107643 TGCGATGTTCAACCACCTCA 59.892 50.000 0.00 0.00 0.00 3.86
4142 7748 1.234821 TTGCGATGTTCAACCACCTC 58.765 50.000 0.00 0.00 0.00 3.85
4143 7749 1.541147 CATTGCGATGTTCAACCACCT 59.459 47.619 5.70 0.00 0.00 4.00
4144 7750 1.539388 TCATTGCGATGTTCAACCACC 59.461 47.619 13.73 0.00 34.77 4.61
4145 7751 2.987413 TCATTGCGATGTTCAACCAC 57.013 45.000 13.73 0.00 34.77 4.16
4146 7752 3.490800 CATCATTGCGATGTTCAACCA 57.509 42.857 13.73 0.00 45.61 3.67
4155 7761 1.244816 CATCTGGCCATCATTGCGAT 58.755 50.000 5.51 0.00 33.27 4.58
4156 7762 0.820482 CCATCTGGCCATCATTGCGA 60.820 55.000 5.51 0.00 0.00 5.10
4157 7763 1.658114 CCATCTGGCCATCATTGCG 59.342 57.895 5.51 0.00 0.00 4.85
4168 7774 2.203070 GTAGCCACGGCCATCTGG 60.203 66.667 2.24 5.00 43.17 3.86
4169 7775 1.078497 TTGTAGCCACGGCCATCTG 60.078 57.895 2.24 0.00 43.17 2.90
4170 7776 1.078426 GTTGTAGCCACGGCCATCT 60.078 57.895 2.24 0.00 43.17 2.90
4171 7777 2.461110 CGTTGTAGCCACGGCCATC 61.461 63.158 2.24 0.00 43.17 3.51
4172 7778 1.890625 TACGTTGTAGCCACGGCCAT 61.891 55.000 2.24 0.00 43.17 4.40
4173 7779 2.572149 TACGTTGTAGCCACGGCCA 61.572 57.895 2.24 0.00 43.17 5.36
4174 7780 2.096442 GTACGTTGTAGCCACGGCC 61.096 63.158 3.95 0.00 43.17 6.13
4175 7781 2.438954 CGTACGTTGTAGCCACGGC 61.439 63.158 7.22 0.00 42.33 5.68
4176 7782 1.802715 CCGTACGTTGTAGCCACGG 60.803 63.158 15.21 9.19 45.25 4.94
4177 7783 0.179156 ATCCGTACGTTGTAGCCACG 60.179 55.000 15.21 0.00 0.00 4.94
4178 7784 1.135315 TGATCCGTACGTTGTAGCCAC 60.135 52.381 15.21 0.00 0.00 5.01
4179 7785 1.175654 TGATCCGTACGTTGTAGCCA 58.824 50.000 15.21 0.00 0.00 4.75
4180 7786 2.503920 ATGATCCGTACGTTGTAGCC 57.496 50.000 15.21 0.00 0.00 3.93
4181 7787 3.956233 TGTATGATCCGTACGTTGTAGC 58.044 45.455 15.21 0.09 0.00 3.58
4182 7788 5.680229 GTCTTGTATGATCCGTACGTTGTAG 59.320 44.000 15.21 0.00 0.00 2.74
4183 7789 5.449041 GGTCTTGTATGATCCGTACGTTGTA 60.449 44.000 15.21 0.00 0.00 2.41
4184 7790 4.418392 GTCTTGTATGATCCGTACGTTGT 58.582 43.478 15.21 0.00 0.00 3.32
4185 7791 3.795101 GGTCTTGTATGATCCGTACGTTG 59.205 47.826 15.21 0.00 0.00 4.10
4186 7792 3.444742 TGGTCTTGTATGATCCGTACGTT 59.555 43.478 15.21 0.48 0.00 3.99
4187 7793 3.018856 TGGTCTTGTATGATCCGTACGT 58.981 45.455 15.21 0.00 0.00 3.57
4188 7794 3.703286 TGGTCTTGTATGATCCGTACG 57.297 47.619 8.69 8.69 0.00 3.67
4189 7795 4.307432 CCATGGTCTTGTATGATCCGTAC 58.693 47.826 2.57 0.00 0.00 3.67
4190 7796 3.323691 CCCATGGTCTTGTATGATCCGTA 59.676 47.826 11.73 0.00 0.00 4.02
4191 7797 2.104792 CCCATGGTCTTGTATGATCCGT 59.895 50.000 11.73 0.00 0.00 4.69
4192 7798 2.771089 CCCATGGTCTTGTATGATCCG 58.229 52.381 11.73 0.00 0.00 4.18
4193 7799 2.158623 TGCCCATGGTCTTGTATGATCC 60.159 50.000 11.73 0.00 0.00 3.36
4194 7800 3.144506 CTGCCCATGGTCTTGTATGATC 58.855 50.000 11.73 0.00 0.00 2.92
4195 7801 2.779430 TCTGCCCATGGTCTTGTATGAT 59.221 45.455 11.73 0.00 0.00 2.45
4196 7802 2.195727 TCTGCCCATGGTCTTGTATGA 58.804 47.619 11.73 0.00 0.00 2.15
4197 7803 2.715749 TCTGCCCATGGTCTTGTATG 57.284 50.000 11.73 0.00 0.00 2.39
4198 7804 3.435601 GGAATCTGCCCATGGTCTTGTAT 60.436 47.826 11.73 0.00 0.00 2.29
4199 7805 2.092429 GGAATCTGCCCATGGTCTTGTA 60.092 50.000 11.73 0.00 0.00 2.41
4200 7806 1.341383 GGAATCTGCCCATGGTCTTGT 60.341 52.381 11.73 0.00 0.00 3.16
4201 7807 1.341285 TGGAATCTGCCCATGGTCTTG 60.341 52.381 11.73 0.00 0.00 3.02
4202 7808 1.002069 TGGAATCTGCCCATGGTCTT 58.998 50.000 11.73 0.00 0.00 3.01
4203 7809 1.002069 TTGGAATCTGCCCATGGTCT 58.998 50.000 11.73 0.00 33.04 3.85
4204 7810 1.851304 TTTGGAATCTGCCCATGGTC 58.149 50.000 11.73 0.00 33.04 4.02
4205 7811 2.391678 GATTTGGAATCTGCCCATGGT 58.608 47.619 11.73 0.00 33.04 3.55
4206 7812 1.338973 CGATTTGGAATCTGCCCATGG 59.661 52.381 4.14 4.14 33.04 3.66
4207 7813 1.269413 GCGATTTGGAATCTGCCCATG 60.269 52.381 0.00 0.00 33.04 3.66
4208 7814 1.035139 GCGATTTGGAATCTGCCCAT 58.965 50.000 0.00 0.00 33.04 4.00
4209 7815 0.323269 TGCGATTTGGAATCTGCCCA 60.323 50.000 11.79 0.00 0.00 5.36
4210 7816 0.817013 TTGCGATTTGGAATCTGCCC 59.183 50.000 11.79 0.00 0.00 5.36
4211 7817 2.877043 ATTGCGATTTGGAATCTGCC 57.123 45.000 11.79 0.00 32.50 4.85
4216 7822 1.410153 GCTGGGATTGCGATTTGGAAT 59.590 47.619 0.00 0.00 41.87 3.01
4217 7823 0.817013 GCTGGGATTGCGATTTGGAA 59.183 50.000 0.00 0.00 0.00 3.53
4218 7824 2.492418 GCTGGGATTGCGATTTGGA 58.508 52.632 0.00 0.00 0.00 3.53
4226 7832 2.514824 GGACTCCGCTGGGATTGC 60.515 66.667 0.00 0.00 42.83 3.56
4227 7833 1.153289 CTGGACTCCGCTGGGATTG 60.153 63.158 0.00 0.00 42.83 2.67
4228 7834 1.306141 TCTGGACTCCGCTGGGATT 60.306 57.895 0.00 0.00 42.83 3.01
4229 7835 1.760086 CTCTGGACTCCGCTGGGAT 60.760 63.158 0.00 0.00 42.83 3.85
4230 7836 2.363018 CTCTGGACTCCGCTGGGA 60.363 66.667 0.00 0.00 41.08 4.37
4231 7837 4.154347 GCTCTGGACTCCGCTGGG 62.154 72.222 0.00 0.00 0.00 4.45
4232 7838 4.504916 CGCTCTGGACTCCGCTGG 62.505 72.222 0.00 0.00 0.00 4.85
4235 7841 4.863925 GAGCGCTCTGGACTCCGC 62.864 72.222 29.88 0.00 46.14 5.54
4236 7842 2.219325 AAAGAGCGCTCTGGACTCCG 62.219 60.000 38.78 0.00 40.36 4.63
4237 7843 0.459411 GAAAGAGCGCTCTGGACTCC 60.459 60.000 38.78 19.88 40.36 3.85
4238 7844 0.800300 CGAAAGAGCGCTCTGGACTC 60.800 60.000 38.78 27.96 40.36 3.36
4239 7845 1.214062 CGAAAGAGCGCTCTGGACT 59.786 57.895 38.78 21.76 40.36 3.85
4240 7846 3.773974 CGAAAGAGCGCTCTGGAC 58.226 61.111 38.78 28.28 40.36 4.02
4258 7864 4.430423 GAAGCTGTTGTCGCCGCG 62.430 66.667 6.39 6.39 0.00 6.46
4259 7865 3.300667 CTGAAGCTGTTGTCGCCGC 62.301 63.158 0.00 0.00 0.00 6.53
4260 7866 1.956170 ACTGAAGCTGTTGTCGCCG 60.956 57.895 0.00 0.00 0.00 6.46
4261 7867 1.571460 CACTGAAGCTGTTGTCGCC 59.429 57.895 0.00 0.00 0.00 5.54
4262 7868 1.571460 CCACTGAAGCTGTTGTCGC 59.429 57.895 0.00 0.00 0.00 5.19
4263 7869 1.230635 CCCCACTGAAGCTGTTGTCG 61.231 60.000 0.00 0.00 0.00 4.35
4264 7870 1.518903 GCCCCACTGAAGCTGTTGTC 61.519 60.000 0.00 0.00 0.00 3.18
4265 7871 1.529244 GCCCCACTGAAGCTGTTGT 60.529 57.895 0.00 0.00 0.00 3.32
4266 7872 0.896940 ATGCCCCACTGAAGCTGTTG 60.897 55.000 0.00 0.00 0.00 3.33
4267 7873 0.896940 CATGCCCCACTGAAGCTGTT 60.897 55.000 0.00 0.00 0.00 3.16
4268 7874 1.303888 CATGCCCCACTGAAGCTGT 60.304 57.895 0.00 0.00 0.00 4.40
4269 7875 2.050350 CCATGCCCCACTGAAGCTG 61.050 63.158 0.00 0.00 0.00 4.24
4270 7876 2.357836 CCATGCCCCACTGAAGCT 59.642 61.111 0.00 0.00 0.00 3.74
4271 7877 2.757099 CCCATGCCCCACTGAAGC 60.757 66.667 0.00 0.00 0.00 3.86
4272 7878 2.757099 GCCCATGCCCCACTGAAG 60.757 66.667 0.00 0.00 0.00 3.02
4273 7879 3.157733 TTGCCCATGCCCCACTGAA 62.158 57.895 0.00 0.00 36.33 3.02
4274 7880 3.588511 TTGCCCATGCCCCACTGA 61.589 61.111 0.00 0.00 36.33 3.41
4275 7881 3.072468 CTTGCCCATGCCCCACTG 61.072 66.667 0.00 0.00 36.33 3.66
4276 7882 3.267233 TCTTGCCCATGCCCCACT 61.267 61.111 0.00 0.00 36.33 4.00
4277 7883 3.070576 GTCTTGCCCATGCCCCAC 61.071 66.667 0.00 0.00 36.33 4.61
4278 7884 1.579140 TATGTCTTGCCCATGCCCCA 61.579 55.000 0.00 0.00 36.33 4.96
4279 7885 1.109323 GTATGTCTTGCCCATGCCCC 61.109 60.000 0.00 0.00 36.33 5.80
4280 7886 1.447317 CGTATGTCTTGCCCATGCCC 61.447 60.000 0.00 0.00 36.33 5.36
4281 7887 0.748005 ACGTATGTCTTGCCCATGCC 60.748 55.000 0.00 0.00 36.33 4.40
4282 7888 1.094785 AACGTATGTCTTGCCCATGC 58.905 50.000 0.00 0.00 38.26 4.06
4283 7889 3.848272 AAAACGTATGTCTTGCCCATG 57.152 42.857 0.00 0.00 0.00 3.66
4284 7890 3.056891 CCAAAAACGTATGTCTTGCCCAT 60.057 43.478 0.00 0.00 0.00 4.00
4285 7891 2.294791 CCAAAAACGTATGTCTTGCCCA 59.705 45.455 0.00 0.00 0.00 5.36
4286 7892 2.352323 CCCAAAAACGTATGTCTTGCCC 60.352 50.000 0.00 0.00 0.00 5.36
4287 7893 2.554893 TCCCAAAAACGTATGTCTTGCC 59.445 45.455 0.00 0.00 0.00 4.52
4288 7894 3.907894 TCCCAAAAACGTATGTCTTGC 57.092 42.857 0.00 0.00 0.00 4.01
4289 7895 5.008217 TGTCTTCCCAAAAACGTATGTCTTG 59.992 40.000 0.00 0.00 0.00 3.02
4290 7896 5.127491 TGTCTTCCCAAAAACGTATGTCTT 58.873 37.500 0.00 0.00 0.00 3.01
4291 7897 4.710324 TGTCTTCCCAAAAACGTATGTCT 58.290 39.130 0.00 0.00 0.00 3.41
4292 7898 5.008316 ACTTGTCTTCCCAAAAACGTATGTC 59.992 40.000 0.00 0.00 0.00 3.06
4293 7899 4.885325 ACTTGTCTTCCCAAAAACGTATGT 59.115 37.500 0.00 0.00 0.00 2.29
4294 7900 5.212194 CACTTGTCTTCCCAAAAACGTATG 58.788 41.667 0.00 0.00 0.00 2.39
4295 7901 4.277423 CCACTTGTCTTCCCAAAAACGTAT 59.723 41.667 0.00 0.00 0.00 3.06
4296 7902 3.628487 CCACTTGTCTTCCCAAAAACGTA 59.372 43.478 0.00 0.00 0.00 3.57
4297 7903 2.425668 CCACTTGTCTTCCCAAAAACGT 59.574 45.455 0.00 0.00 0.00 3.99
4298 7904 3.078594 CCACTTGTCTTCCCAAAAACG 57.921 47.619 0.00 0.00 0.00 3.60


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.