Multiple sequence alignment - TraesCS2D01G337500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G337500 chr2D 100.000 5482 0 0 1 5482 430622556 430628037 0.000000e+00 10124.0
1 TraesCS2D01G337500 chr2D 83.843 229 34 3 2952 3178 139025724 139025497 1.200000e-51 215.0
2 TraesCS2D01G337500 chr2B 91.787 1875 92 20 803 2646 508957336 508959179 0.000000e+00 2553.0
3 TraesCS2D01G337500 chr2B 90.691 999 36 12 2750 3725 508959178 508960142 0.000000e+00 1277.0
4 TraesCS2D01G337500 chr2B 92.801 764 36 7 3800 4548 508960240 508960999 0.000000e+00 1088.0
5 TraesCS2D01G337500 chr2B 97.381 420 7 4 8 424 508956657 508957075 0.000000e+00 712.0
6 TraesCS2D01G337500 chr2B 83.468 248 12 13 4534 4753 508962040 508962286 2.590000e-48 204.0
7 TraesCS2D01G337500 chr2B 93.846 130 6 1 4755 4882 508962429 508962558 1.560000e-45 195.0
8 TraesCS2D01G337500 chr2B 78.529 340 42 18 4935 5266 508962555 508962871 1.560000e-45 195.0
9 TraesCS2D01G337500 chr2B 93.333 105 7 0 544 648 508957229 508957333 7.350000e-34 156.0
10 TraesCS2D01G337500 chr2B 95.946 74 3 0 440 513 508957060 508957133 2.680000e-23 121.0
11 TraesCS2D01G337500 chr2B 95.833 72 3 0 5409 5480 508962938 508963009 3.470000e-22 117.0
12 TraesCS2D01G337500 chr2B 95.588 68 3 0 5085 5152 508962657 508962724 5.810000e-20 110.0
13 TraesCS2D01G337500 chr2B 97.619 42 1 0 5305 5346 508962880 508962921 7.620000e-09 73.1
14 TraesCS2D01G337500 chr2B 100.000 31 0 0 509 539 508957162 508957192 2.130000e-04 58.4
15 TraesCS2D01G337500 chr2A 91.240 1678 90 22 1004 2646 555337051 555335396 0.000000e+00 2231.0
16 TraesCS2D01G337500 chr2A 89.625 694 56 9 3800 4489 555333859 555333178 0.000000e+00 869.0
17 TraesCS2D01G337500 chr2A 99.292 424 2 1 1 424 555338229 555337807 0.000000e+00 765.0
18 TraesCS2D01G337500 chr2A 84.826 547 39 22 3198 3725 555334477 555333956 1.360000e-140 510.0
19 TraesCS2D01G337500 chr2A 82.520 246 38 5 2952 3194 161954591 161954834 1.550000e-50 211.0
20 TraesCS2D01G337500 chr2A 91.743 109 9 0 2643 2751 152700827 152700719 9.510000e-33 152.0
21 TraesCS2D01G337500 chr2A 88.785 107 12 0 2645 2751 30047354 30047460 1.240000e-26 132.0
22 TraesCS2D01G337500 chr2A 93.243 74 5 0 440 513 555337822 555337749 5.810000e-20 110.0
23 TraesCS2D01G337500 chrUn 100.000 171 0 0 1 171 478027251 478027081 3.190000e-82 316.0
24 TraesCS2D01G337500 chr5B 85.227 264 28 8 2950 3203 485912328 485912066 1.510000e-65 261.0
25 TraesCS2D01G337500 chr5B 100.000 30 0 0 4503 4532 684745685 684745714 7.670000e-04 56.5
26 TraesCS2D01G337500 chr5A 85.600 250 30 5 2950 3195 445133911 445134158 1.960000e-64 257.0
27 TraesCS2D01G337500 chr7B 83.465 254 34 7 2950 3200 297400473 297400721 4.270000e-56 230.0
28 TraesCS2D01G337500 chr7B 90.517 116 8 3 2641 2754 29592148 29592262 3.420000e-32 150.0
29 TraesCS2D01G337500 chr7A 82.677 254 37 7 2950 3200 391906756 391906507 9.250000e-53 219.0
30 TraesCS2D01G337500 chr3A 82.609 253 39 4 2951 3201 468533879 468533630 9.250000e-53 219.0
31 TraesCS2D01G337500 chr1D 82.186 247 33 10 2951 3189 435755375 435755132 9.310000e-48 202.0
32 TraesCS2D01G337500 chr5D 98.182 110 1 1 2642 2751 488869913 488870021 2.020000e-44 191.0
33 TraesCS2D01G337500 chr5D 96.262 107 4 0 2645 2751 133301492 133301598 5.640000e-40 176.0
34 TraesCS2D01G337500 chr1B 87.121 132 13 4 2645 2773 27713519 27713389 4.430000e-31 147.0
35 TraesCS2D01G337500 chr1B 100.000 28 0 0 4506 4533 688396918 688396945 1.000000e-02 52.8
36 TraesCS2D01G337500 chr6B 88.000 125 11 4 2645 2768 35376197 35376076 1.590000e-30 145.0
37 TraesCS2D01G337500 chr3D 87.903 124 14 1 2639 2761 28843810 28843687 1.590000e-30 145.0
38 TraesCS2D01G337500 chr1A 87.903 124 13 2 2637 2759 119717411 119717289 1.590000e-30 145.0
39 TraesCS2D01G337500 chr4B 100.000 30 0 0 4504 4533 31871757 31871728 7.670000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G337500 chr2D 430622556 430628037 5481 False 10124.000000 10124 100.000000 1 5482 1 chr2D.!!$F1 5481
1 TraesCS2D01G337500 chr2B 508956657 508963009 6352 False 527.653846 2553 92.832462 8 5480 13 chr2B.!!$F1 5472
2 TraesCS2D01G337500 chr2A 555333178 555338229 5051 True 897.000000 2231 91.645200 1 4489 5 chr2A.!!$R2 4488

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
500 504 1.519719 GAGGACTGAGGCAGCGATT 59.480 57.895 0.00 0.0 34.37 3.34 F
1416 1679 2.086869 TGCTCTGTATTTTGCTGCTCC 58.913 47.619 0.00 0.0 0.00 4.70 F
1621 1900 1.068610 TGTTTGTAATTCTGCTGCGCC 60.069 47.619 4.18 0.0 0.00 6.53 F
1627 1906 1.379642 AATTCTGCTGCGCCTTAGCC 61.380 55.000 14.81 0.0 40.42 3.93 F
2746 3043 1.479323 TGAGTATTTCCGAACGGAGGG 59.521 52.381 15.34 0.0 46.06 4.30 F
4207 5336 1.177895 TTGCTTCATTTGGAGCCGCA 61.178 50.000 8.35 0.0 0.00 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1486 1749 0.723414 CGATCAAACAGCAGTGCGAT 59.277 50.0 10.00 5.78 0.00 4.58 R
2221 2518 0.746659 AGCAACCAAACTTGCCAGTC 59.253 50.0 0.32 0.00 46.63 3.51 R
3553 4638 0.037303 CAAAGGAGCTTGCCAGAGGA 59.963 55.0 0.00 0.00 0.00 3.71 R
3554 4639 0.251077 ACAAAGGAGCTTGCCAGAGG 60.251 55.0 0.00 0.00 0.00 3.69 R
4390 5523 1.060713 CACAAAGTGTAGGCGACGAG 58.939 55.0 0.00 0.00 0.00 4.18 R
5354 7765 0.029163 TCCCTGGGGAGGATATGCAA 60.029 55.0 14.00 0.00 39.76 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
424 428 3.037549 TGGCCATGTGAACTTTTTCCTT 58.962 40.909 0.00 0.00 0.00 3.36
425 429 3.454082 TGGCCATGTGAACTTTTTCCTTT 59.546 39.130 0.00 0.00 0.00 3.11
426 430 4.080638 TGGCCATGTGAACTTTTTCCTTTT 60.081 37.500 0.00 0.00 0.00 2.27
427 431 4.881273 GGCCATGTGAACTTTTTCCTTTTT 59.119 37.500 0.00 0.00 0.00 1.94
453 457 8.710835 TTTTGAGGTTTATGTGAACTTTTTCC 57.289 30.769 0.00 0.00 0.00 3.13
454 458 7.654022 TTGAGGTTTATGTGAACTTTTTCCT 57.346 32.000 0.00 0.00 0.00 3.36
500 504 1.519719 GAGGACTGAGGCAGCGATT 59.480 57.895 0.00 0.00 34.37 3.34
539 576 2.364970 TGGAAGCCAAACCAAACAGATG 59.635 45.455 0.00 0.00 32.93 2.90
549 618 4.098914 ACCAAACAGATGGCTACTTGAA 57.901 40.909 0.00 0.00 44.75 2.69
623 692 8.608317 GCTAAACTAGAGAAGGCATTTTCTTAG 58.392 37.037 9.57 6.60 37.53 2.18
639 708 2.758852 TTAGGCCCTCTGGTCGGGTT 62.759 60.000 0.00 0.00 42.85 4.11
667 739 6.263617 TGGGGTGTGTTCTCAATTTAACTAAC 59.736 38.462 0.00 0.00 0.00 2.34
668 740 6.368213 GGGTGTGTTCTCAATTTAACTAACG 58.632 40.000 0.00 0.00 0.00 3.18
694 766 8.850454 AAATATGTGTTATATGCCGTCAAAAC 57.150 30.769 0.00 0.00 0.00 2.43
695 767 7.801716 ATATGTGTTATATGCCGTCAAAACT 57.198 32.000 0.00 0.00 0.00 2.66
696 768 8.896320 ATATGTGTTATATGCCGTCAAAACTA 57.104 30.769 0.00 0.00 0.00 2.24
697 769 6.411630 TGTGTTATATGCCGTCAAAACTAC 57.588 37.500 0.00 0.00 0.00 2.73
746 818 9.054922 ACATATGTTTTGTTTCCCAAATTGAAG 57.945 29.630 1.41 0.00 42.45 3.02
748 820 6.976636 TGTTTTGTTTCCCAAATTGAAGAC 57.023 33.333 0.00 0.00 42.45 3.01
755 827 7.852263 TGTTTCCCAAATTGAAGACCTAAAAA 58.148 30.769 0.00 0.00 0.00 1.94
763 835 3.547746 TGAAGACCTAAAAACCTGCGTT 58.452 40.909 0.00 0.00 0.00 4.84
780 879 2.874457 GCGTTGACCCTACAAACCTCAT 60.874 50.000 0.00 0.00 0.00 2.90
827 927 4.817517 TCTCGAAAATTCTAAACGGAGCT 58.182 39.130 0.00 0.00 0.00 4.09
828 928 5.235516 TCTCGAAAATTCTAAACGGAGCTT 58.764 37.500 0.00 0.00 0.00 3.74
829 929 5.120208 TCTCGAAAATTCTAAACGGAGCTTG 59.880 40.000 0.00 0.00 0.00 4.01
832 932 5.334569 CGAAAATTCTAAACGGAGCTTGGAA 60.335 40.000 0.00 0.00 37.47 3.53
857 959 9.522804 AATCGTAAGCAGTGTGAAAATTAAAAA 57.477 25.926 0.00 0.00 37.18 1.94
964 1069 7.093322 ACAATTCTTCCTGTTTCATCATAGC 57.907 36.000 0.00 0.00 0.00 2.97
965 1070 5.998454 ATTCTTCCTGTTTCATCATAGCG 57.002 39.130 0.00 0.00 0.00 4.26
1371 1634 3.984732 GCCTTCAAGCCCCACCCT 61.985 66.667 0.00 0.00 0.00 4.34
1414 1677 3.008330 CTCTGCTCTGTATTTTGCTGCT 58.992 45.455 0.00 0.00 0.00 4.24
1415 1678 3.005554 TCTGCTCTGTATTTTGCTGCTC 58.994 45.455 0.00 0.00 0.00 4.26
1416 1679 2.086869 TGCTCTGTATTTTGCTGCTCC 58.913 47.619 0.00 0.00 0.00 4.70
1418 1681 2.097142 GCTCTGTATTTTGCTGCTCCAG 59.903 50.000 0.00 0.00 34.12 3.86
1441 1704 3.631145 GTGTCCAACGTAGACTGTACA 57.369 47.619 16.84 0.00 35.21 2.90
1442 1705 4.170292 GTGTCCAACGTAGACTGTACAT 57.830 45.455 16.84 0.00 35.21 2.29
1443 1706 4.553323 GTGTCCAACGTAGACTGTACATT 58.447 43.478 16.84 0.00 35.21 2.71
1444 1707 4.986659 GTGTCCAACGTAGACTGTACATTT 59.013 41.667 16.84 0.00 35.21 2.32
1445 1708 4.986034 TGTCCAACGTAGACTGTACATTTG 59.014 41.667 16.84 0.00 35.21 2.32
1446 1709 4.986659 GTCCAACGTAGACTGTACATTTGT 59.013 41.667 10.56 0.00 0.00 2.83
1447 1710 6.151691 GTCCAACGTAGACTGTACATTTGTA 58.848 40.000 10.56 0.00 0.00 2.41
1448 1711 8.208015 TGTCCAACGTAGACTGTACATTTGTAC 61.208 40.741 16.84 12.82 40.30 2.90
1468 1731 7.504926 TGTACCCAATAGTTTTGTCTAGGAT 57.495 36.000 0.00 0.00 0.00 3.24
1486 1749 5.282055 AGGATTGTAGATTGCTCATTCGA 57.718 39.130 0.00 0.00 0.00 3.71
1489 1752 5.164012 GGATTGTAGATTGCTCATTCGATCG 60.164 44.000 9.36 9.36 33.17 3.69
1492 1755 1.863454 AGATTGCTCATTCGATCGCAC 59.137 47.619 11.09 0.00 33.17 5.34
1559 1822 5.736813 AGGGTTCTAAATGCAACGTACATA 58.263 37.500 4.58 0.00 0.00 2.29
1560 1823 5.583457 AGGGTTCTAAATGCAACGTACATAC 59.417 40.000 4.58 0.01 0.00 2.39
1561 1824 5.352016 GGGTTCTAAATGCAACGTACATACA 59.648 40.000 4.58 0.00 0.00 2.29
1562 1825 6.037830 GGGTTCTAAATGCAACGTACATACAT 59.962 38.462 4.58 0.00 0.00 2.29
1567 1830 3.219052 TGCAACGTACATACATCGTGA 57.781 42.857 0.00 0.00 37.85 4.35
1570 1833 2.101053 ACGTACATACATCGTGAGCG 57.899 50.000 0.00 0.00 36.46 5.03
1581 1844 1.082756 CGTGAGCGAAACAAGTGCC 60.083 57.895 0.00 0.00 41.33 5.01
1597 1876 7.225784 ACAAGTGCCAACAAACATATGATTA 57.774 32.000 10.38 0.00 0.00 1.75
1600 1879 8.597227 CAAGTGCCAACAAACATATGATTAATG 58.403 33.333 10.38 6.36 0.00 1.90
1603 1882 7.545265 GTGCCAACAAACATATGATTAATGTGT 59.455 33.333 10.38 0.00 41.94 3.72
1618 1897 7.541783 TGATTAATGTGTTTGTAATTCTGCTGC 59.458 33.333 0.00 0.00 0.00 5.25
1621 1900 1.068610 TGTTTGTAATTCTGCTGCGCC 60.069 47.619 4.18 0.00 0.00 6.53
1627 1906 1.379642 AATTCTGCTGCGCCTTAGCC 61.380 55.000 14.81 0.00 40.42 3.93
1632 1911 4.796231 CTGCGCCTTAGCCGTCGT 62.796 66.667 4.18 0.00 36.02 4.34
1639 1918 2.547826 GCCTTAGCCGTCGTCTTTTAT 58.452 47.619 0.00 0.00 0.00 1.40
1645 1924 2.930040 AGCCGTCGTCTTTTATGATGTG 59.070 45.455 0.00 0.00 0.00 3.21
1647 1926 2.030457 CCGTCGTCTTTTATGATGTGGC 59.970 50.000 0.00 0.00 0.00 5.01
1649 1928 4.109766 CGTCGTCTTTTATGATGTGGCTA 58.890 43.478 0.00 0.00 0.00 3.93
1794 2073 5.668558 AACTAGGTAAAGTGAGTTTTGCG 57.331 39.130 0.00 0.00 0.00 4.85
1798 2077 2.787129 GGTAAAGTGAGTTTTGCGCAAC 59.213 45.455 24.99 13.92 0.00 4.17
2034 2330 4.371786 TGCTAGCTCGTTTTCTATGGATG 58.628 43.478 17.23 0.00 0.00 3.51
2035 2331 4.099419 TGCTAGCTCGTTTTCTATGGATGA 59.901 41.667 17.23 0.00 0.00 2.92
2036 2332 5.221521 TGCTAGCTCGTTTTCTATGGATGAT 60.222 40.000 17.23 0.00 0.00 2.45
2037 2333 6.015434 TGCTAGCTCGTTTTCTATGGATGATA 60.015 38.462 17.23 0.00 0.00 2.15
2038 2334 6.529829 GCTAGCTCGTTTTCTATGGATGATAG 59.470 42.308 7.70 0.00 36.12 2.08
2039 2335 6.412362 AGCTCGTTTTCTATGGATGATAGT 57.588 37.500 0.00 0.00 36.21 2.12
2122 2419 5.173774 TGTTTCATTTGTCTTCTCACTGC 57.826 39.130 0.00 0.00 0.00 4.40
2168 2465 5.970592 TCTGGTCATGTACATCTCTTTGAG 58.029 41.667 5.07 0.00 0.00 3.02
2184 2481 7.004086 TCTCTTTGAGTACATTTTGGTGGAAT 58.996 34.615 0.00 0.00 0.00 3.01
2221 2518 6.084326 ACAACACTACTTTTAAGCCATTGG 57.916 37.500 0.00 0.00 0.00 3.16
2416 2713 2.292845 AGAAGAAGAAAGCTGCTGTTGC 59.707 45.455 1.35 0.00 40.20 4.17
2644 2941 4.044426 GCAAAGCTCAAACGTTCATTTCT 58.956 39.130 0.00 0.00 0.00 2.52
2645 2942 5.008613 AGCAAAGCTCAAACGTTCATTTCTA 59.991 36.000 0.00 0.00 30.62 2.10
2646 2943 5.115622 GCAAAGCTCAAACGTTCATTTCTAC 59.884 40.000 0.00 0.00 0.00 2.59
2647 2944 6.430451 CAAAGCTCAAACGTTCATTTCTACT 58.570 36.000 0.00 0.00 0.00 2.57
2648 2945 5.847670 AGCTCAAACGTTCATTTCTACTC 57.152 39.130 0.00 0.00 0.00 2.59
2649 2946 4.691216 AGCTCAAACGTTCATTTCTACTCC 59.309 41.667 0.00 0.00 0.00 3.85
2650 2947 4.142881 GCTCAAACGTTCATTTCTACTCCC 60.143 45.833 0.00 0.00 0.00 4.30
2651 2948 5.223449 TCAAACGTTCATTTCTACTCCCT 57.777 39.130 0.00 0.00 0.00 4.20
2652 2949 5.235516 TCAAACGTTCATTTCTACTCCCTC 58.764 41.667 0.00 0.00 0.00 4.30
2653 2950 5.011738 TCAAACGTTCATTTCTACTCCCTCT 59.988 40.000 0.00 0.00 0.00 3.69
2654 2951 4.457834 ACGTTCATTTCTACTCCCTCTG 57.542 45.455 0.00 0.00 0.00 3.35
2655 2952 3.833070 ACGTTCATTTCTACTCCCTCTGT 59.167 43.478 0.00 0.00 0.00 3.41
2656 2953 4.283722 ACGTTCATTTCTACTCCCTCTGTT 59.716 41.667 0.00 0.00 0.00 3.16
2657 2954 4.865365 CGTTCATTTCTACTCCCTCTGTTC 59.135 45.833 0.00 0.00 0.00 3.18
2658 2955 4.720649 TCATTTCTACTCCCTCTGTTCG 57.279 45.455 0.00 0.00 0.00 3.95
2659 2956 3.447586 TCATTTCTACTCCCTCTGTTCGG 59.552 47.826 0.00 0.00 0.00 4.30
2660 2957 2.893215 TTCTACTCCCTCTGTTCGGA 57.107 50.000 0.00 0.00 0.00 4.55
2661 2958 2.893215 TCTACTCCCTCTGTTCGGAA 57.107 50.000 0.00 0.00 0.00 4.30
2662 2959 3.165087 TCTACTCCCTCTGTTCGGAAA 57.835 47.619 0.00 0.00 0.00 3.13
2663 2960 3.709587 TCTACTCCCTCTGTTCGGAAAT 58.290 45.455 0.00 0.00 0.00 2.17
2664 2961 4.863548 TCTACTCCCTCTGTTCGGAAATA 58.136 43.478 0.00 0.00 0.00 1.40
2665 2962 3.889520 ACTCCCTCTGTTCGGAAATAC 57.110 47.619 0.00 0.00 0.00 1.89
2666 2963 3.442076 ACTCCCTCTGTTCGGAAATACT 58.558 45.455 0.00 0.00 0.00 2.12
2667 2964 3.838903 ACTCCCTCTGTTCGGAAATACTT 59.161 43.478 0.00 0.00 0.00 2.24
2668 2965 4.184629 CTCCCTCTGTTCGGAAATACTTG 58.815 47.826 0.00 0.00 0.00 3.16
2669 2966 3.581332 TCCCTCTGTTCGGAAATACTTGT 59.419 43.478 0.00 0.00 0.00 3.16
2670 2967 3.933332 CCCTCTGTTCGGAAATACTTGTC 59.067 47.826 0.00 0.00 0.00 3.18
2671 2968 3.612860 CCTCTGTTCGGAAATACTTGTCG 59.387 47.826 0.00 0.00 0.00 4.35
2672 2969 3.581755 TCTGTTCGGAAATACTTGTCGG 58.418 45.455 0.00 0.00 0.00 4.79
2673 2970 3.256383 TCTGTTCGGAAATACTTGTCGGA 59.744 43.478 0.00 0.00 0.00 4.55
2674 2971 3.581755 TGTTCGGAAATACTTGTCGGAG 58.418 45.455 0.00 0.00 0.00 4.63
2675 2972 3.256383 TGTTCGGAAATACTTGTCGGAGA 59.744 43.478 0.00 0.00 0.00 3.71
2676 2973 4.240096 GTTCGGAAATACTTGTCGGAGAA 58.760 43.478 0.00 0.00 39.69 2.87
2677 2974 4.524316 TCGGAAATACTTGTCGGAGAAA 57.476 40.909 0.00 0.00 39.69 2.52
2678 2975 5.080969 TCGGAAATACTTGTCGGAGAAAT 57.919 39.130 0.00 0.00 39.69 2.17
2679 2976 5.107133 TCGGAAATACTTGTCGGAGAAATC 58.893 41.667 0.00 0.00 39.69 2.17
2680 2977 4.026804 CGGAAATACTTGTCGGAGAAATCG 60.027 45.833 0.00 0.00 39.69 3.34
2681 2978 5.107133 GGAAATACTTGTCGGAGAAATCGA 58.893 41.667 0.00 0.00 39.69 3.59
2682 2979 5.753921 GGAAATACTTGTCGGAGAAATCGAT 59.246 40.000 0.00 0.00 39.69 3.59
2683 2980 6.292381 GGAAATACTTGTCGGAGAAATCGATG 60.292 42.308 0.00 0.00 39.69 3.84
2684 2981 3.594603 ACTTGTCGGAGAAATCGATGT 57.405 42.857 0.00 0.00 39.69 3.06
2685 2982 4.713824 ACTTGTCGGAGAAATCGATGTA 57.286 40.909 0.00 0.00 39.69 2.29
2686 2983 5.263968 ACTTGTCGGAGAAATCGATGTAT 57.736 39.130 0.00 0.00 39.69 2.29
2687 2984 5.282510 ACTTGTCGGAGAAATCGATGTATC 58.717 41.667 0.00 0.00 39.69 2.24
2688 2985 5.067936 ACTTGTCGGAGAAATCGATGTATCT 59.932 40.000 9.96 8.91 39.69 1.98
2689 2986 6.262496 ACTTGTCGGAGAAATCGATGTATCTA 59.738 38.462 9.96 0.00 39.69 1.98
2690 2987 6.242508 TGTCGGAGAAATCGATGTATCTAG 57.757 41.667 9.96 5.29 39.69 2.43
2691 2988 5.995897 TGTCGGAGAAATCGATGTATCTAGA 59.004 40.000 9.96 7.34 39.69 2.43
2692 2989 6.485648 TGTCGGAGAAATCGATGTATCTAGAA 59.514 38.462 9.96 0.75 39.69 2.10
2693 2990 6.797995 GTCGGAGAAATCGATGTATCTAGAAC 59.202 42.308 9.96 0.00 39.69 3.01
2694 2991 6.711194 TCGGAGAAATCGATGTATCTAGAACT 59.289 38.462 9.96 0.00 0.00 3.01
2695 2992 7.876582 TCGGAGAAATCGATGTATCTAGAACTA 59.123 37.037 9.96 0.00 0.00 2.24
2696 2993 8.504815 CGGAGAAATCGATGTATCTAGAACTAA 58.495 37.037 9.96 0.00 0.00 2.24
2721 3018 8.871629 AAATACGTCTAGATACATCCATCTCT 57.128 34.615 0.00 0.00 36.63 3.10
2722 3019 8.871629 AATACGTCTAGATACATCCATCTCTT 57.128 34.615 0.00 0.00 36.63 2.85
2723 3020 6.811253 ACGTCTAGATACATCCATCTCTTC 57.189 41.667 0.00 0.00 36.63 2.87
2724 3021 5.410132 ACGTCTAGATACATCCATCTCTTCG 59.590 44.000 0.00 0.00 36.63 3.79
2725 3022 5.639931 CGTCTAGATACATCCATCTCTTCGA 59.360 44.000 0.00 0.00 36.63 3.71
2726 3023 6.315144 CGTCTAGATACATCCATCTCTTCGAT 59.685 42.308 0.00 0.00 36.63 3.59
2739 3036 5.830000 TCTCTTCGATGAGTATTTCCGAA 57.170 39.130 23.22 0.00 37.61 4.30
2740 3037 5.579718 TCTCTTCGATGAGTATTTCCGAAC 58.420 41.667 23.22 0.00 35.71 3.95
2741 3038 4.348656 TCTTCGATGAGTATTTCCGAACG 58.651 43.478 0.00 0.00 35.71 3.95
2742 3039 3.074504 TCGATGAGTATTTCCGAACGG 57.925 47.619 6.94 6.94 0.00 4.44
2743 3040 2.684374 TCGATGAGTATTTCCGAACGGA 59.316 45.455 12.04 12.04 43.52 4.69
2744 3041 3.043586 CGATGAGTATTTCCGAACGGAG 58.956 50.000 15.34 0.00 46.06 4.63
2745 3042 2.953466 TGAGTATTTCCGAACGGAGG 57.047 50.000 15.34 0.00 46.06 4.30
2746 3043 1.479323 TGAGTATTTCCGAACGGAGGG 59.521 52.381 15.34 0.00 46.06 4.30
2747 3044 1.753073 GAGTATTTCCGAACGGAGGGA 59.247 52.381 15.34 7.17 46.06 4.20
2748 3045 1.755380 AGTATTTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
3018 4083 9.967451 TTCCTGAAGTTTGACCACATTTATATA 57.033 29.630 0.00 0.00 0.00 0.86
3019 4084 9.967451 TCCTGAAGTTTGACCACATTTATATAA 57.033 29.630 0.00 0.00 0.00 0.98
3211 4277 5.780984 ACAGAGGTAGTAGTGTTTAAGTGC 58.219 41.667 0.00 0.00 0.00 4.40
3220 4286 3.287222 AGTGTTTAAGTGCAGGCAAGAA 58.713 40.909 0.00 0.00 0.00 2.52
3269 4335 4.026052 GGGTGGGATGTGAATCTTGATTT 58.974 43.478 0.00 0.00 0.00 2.17
3486 4553 3.062639 GCCATCAGATGTTATATTCGCCG 59.937 47.826 9.64 0.00 0.00 6.46
3552 4637 6.013898 GGGAACTTATCATCAGATGATCCTCA 60.014 42.308 26.35 9.06 46.62 3.86
3553 4638 7.311171 GGGAACTTATCATCAGATGATCCTCAT 60.311 40.741 26.35 12.27 46.62 2.90
3615 4703 7.493971 ACAAGCAATTTAAGTTATGTGTGCAAA 59.506 29.630 0.00 0.00 33.21 3.68
3622 4710 9.762933 ATTTAAGTTATGTGTGCAAAATCTTGT 57.237 25.926 0.00 0.00 34.79 3.16
3623 4711 8.572828 TTAAGTTATGTGTGCAAAATCTTGTG 57.427 30.769 0.00 0.00 34.79 3.33
3624 4712 5.531634 AGTTATGTGTGCAAAATCTTGTGG 58.468 37.500 0.00 0.00 34.79 4.17
3625 4713 5.068987 AGTTATGTGTGCAAAATCTTGTGGT 59.931 36.000 0.00 0.00 34.79 4.16
3626 4714 3.883830 TGTGTGCAAAATCTTGTGGTT 57.116 38.095 0.00 0.00 34.79 3.67
3627 4715 4.199432 TGTGTGCAAAATCTTGTGGTTT 57.801 36.364 0.00 0.00 34.79 3.27
3628 4716 5.330455 TGTGTGCAAAATCTTGTGGTTTA 57.670 34.783 0.00 0.00 34.79 2.01
3629 4717 5.105752 TGTGTGCAAAATCTTGTGGTTTAC 58.894 37.500 0.00 0.00 34.79 2.01
3630 4718 5.105752 GTGTGCAAAATCTTGTGGTTTACA 58.894 37.500 0.00 0.00 37.56 2.41
3633 4721 6.920758 TGTGCAAAATCTTGTGGTTTACATAC 59.079 34.615 0.00 0.00 39.48 2.39
3637 4725 9.341899 GCAAAATCTTGTGGTTTACATACTTAG 57.658 33.333 0.00 0.00 39.48 2.18
3666 4754 3.591196 ATGCGCAATACCATTTTGTGT 57.409 38.095 17.11 0.00 37.02 3.72
3668 4756 2.294512 TGCGCAATACCATTTTGTGTCA 59.705 40.909 8.16 0.00 37.02 3.58
3689 4777 7.225341 GTGTCAATTTCCTTGCTTCTGAATTTT 59.775 33.333 0.00 0.00 34.66 1.82
3696 4784 5.535783 TCCTTGCTTCTGAATTTTGTGATCA 59.464 36.000 0.00 0.00 0.00 2.92
3697 4785 6.209986 TCCTTGCTTCTGAATTTTGTGATCAT 59.790 34.615 0.00 0.00 0.00 2.45
3771 4900 3.278668 AGTGATTATCTTGCTGCTGCT 57.721 42.857 17.00 0.00 40.48 4.24
3772 4901 2.943690 AGTGATTATCTTGCTGCTGCTG 59.056 45.455 17.00 9.59 40.48 4.41
3773 4902 2.033049 GTGATTATCTTGCTGCTGCTGG 59.967 50.000 17.00 9.21 40.48 4.85
3814 4943 4.853743 GCTAAAAACAGCAGGAGAATTTCG 59.146 41.667 0.00 0.00 41.40 3.46
3825 4954 4.092091 CAGGAGAATTTCGTACTGCACTTC 59.908 45.833 0.00 0.00 0.00 3.01
3831 4960 8.324163 AGAATTTCGTACTGCACTTCTTTATT 57.676 30.769 0.00 0.00 0.00 1.40
3927 5056 2.235845 TAGATGACGAGGACGACGAT 57.764 50.000 0.00 0.00 42.66 3.73
3991 5120 6.655425 GGCTTCAAGGTATTCTAGAACAGTTT 59.345 38.462 7.48 0.00 0.00 2.66
4176 5305 9.341078 TGATTTATTCTGTTAGCTATGCATGAA 57.659 29.630 10.16 1.65 0.00 2.57
4207 5336 1.177895 TTGCTTCATTTGGAGCCGCA 61.178 50.000 8.35 0.00 0.00 5.69
4390 5523 9.257651 GTGGTAATGAACAGTGATAGTTATACC 57.742 37.037 0.00 1.71 35.50 2.73
4452 5587 0.470456 ACGTGGGAGGGAACTGTGTA 60.470 55.000 0.00 0.00 44.43 2.90
4483 5618 9.650371 GTTTTAGTTTTGATTTGAATTTGAGGC 57.350 29.630 0.00 0.00 0.00 4.70
4493 5628 3.889815 TGAATTTGAGGCATACTCCCTG 58.110 45.455 0.00 0.00 46.01 4.45
4497 5632 4.689612 TTTGAGGCATACTCCCTGTATC 57.310 45.455 0.00 0.00 46.01 2.24
4498 5633 3.619900 TGAGGCATACTCCCTGTATCT 57.380 47.619 0.00 0.00 46.01 1.98
4500 5635 5.074746 TGAGGCATACTCCCTGTATCTAA 57.925 43.478 0.00 0.00 46.01 2.10
4501 5636 5.655394 TGAGGCATACTCCCTGTATCTAAT 58.345 41.667 0.00 0.00 46.01 1.73
4548 5695 6.651086 AGGGAGTACTTATGTTTTTAGCTCC 58.349 40.000 0.00 0.00 39.23 4.70
4582 6784 8.590204 TGTTGAATTAGATACACTGGTCTGTTA 58.410 33.333 0.00 0.00 0.00 2.41
4589 6791 9.787435 TTAGATACACTGGTCTGTTAACAAAAT 57.213 29.630 10.03 0.00 0.00 1.82
4617 6820 7.466746 AAAATAATAACTGAGCAGCCTTTCA 57.533 32.000 0.00 0.00 0.00 2.69
4627 6830 1.661112 GCAGCCTTTCATCAGTCGTAC 59.339 52.381 0.00 0.00 0.00 3.67
4681 6908 2.430582 CCAATTGCGGCGGTGTTG 60.431 61.111 9.78 0.00 0.00 3.33
4748 6978 8.971073 ACCTCTTGAGAGAAAAAGAAATGAAAA 58.029 29.630 9.55 0.00 44.74 2.29
4749 6979 9.242477 CCTCTTGAGAGAAAAAGAAATGAAAAC 57.758 33.333 9.55 0.00 44.74 2.43
4750 6980 9.793252 CTCTTGAGAGAAAAAGAAATGAAAACA 57.207 29.630 1.72 0.00 44.74 2.83
4771 7141 7.630242 AACATTGAAGGATCGTAATGTGAAT 57.370 32.000 14.25 1.10 41.43 2.57
4796 7166 0.953960 CCACAGGTTTCCGGCACTAC 60.954 60.000 0.00 0.00 0.00 2.73
4805 7175 1.003839 CCGGCACTACAGAAGGCAA 60.004 57.895 0.00 0.00 0.00 4.52
4844 7214 1.227734 ACGCCCGTGCAGTTTAACT 60.228 52.632 0.00 0.00 37.32 2.24
4870 7240 0.112995 TCAGTCCAAAGCCAGGCAAT 59.887 50.000 15.80 0.00 0.00 3.56
4874 7244 3.196254 CAGTCCAAAGCCAGGCAATAAAT 59.804 43.478 15.80 0.00 0.00 1.40
4875 7245 3.448660 AGTCCAAAGCCAGGCAATAAATC 59.551 43.478 15.80 0.00 0.00 2.17
4876 7246 3.195396 GTCCAAAGCCAGGCAATAAATCA 59.805 43.478 15.80 0.00 0.00 2.57
4877 7247 4.032310 TCCAAAGCCAGGCAATAAATCAT 58.968 39.130 15.80 0.00 0.00 2.45
4878 7248 4.124238 CCAAAGCCAGGCAATAAATCATG 58.876 43.478 15.80 0.00 0.00 3.07
4879 7249 4.141892 CCAAAGCCAGGCAATAAATCATGA 60.142 41.667 15.80 0.00 0.00 3.07
4880 7250 4.931661 AAGCCAGGCAATAAATCATGAG 57.068 40.909 15.80 0.00 0.00 2.90
4881 7251 2.626743 AGCCAGGCAATAAATCATGAGC 59.373 45.455 15.80 0.00 0.00 4.26
4882 7252 2.626743 GCCAGGCAATAAATCATGAGCT 59.373 45.455 6.55 0.00 0.00 4.09
4883 7253 3.305199 GCCAGGCAATAAATCATGAGCTC 60.305 47.826 6.55 6.82 0.00 4.09
4884 7254 4.142790 CCAGGCAATAAATCATGAGCTCT 58.857 43.478 16.19 0.00 0.00 4.09
4885 7255 4.215827 CCAGGCAATAAATCATGAGCTCTC 59.784 45.833 16.19 0.00 0.00 3.20
4886 7256 4.215827 CAGGCAATAAATCATGAGCTCTCC 59.784 45.833 16.19 0.00 0.00 3.71
4887 7257 4.104420 AGGCAATAAATCATGAGCTCTCCT 59.896 41.667 16.19 0.00 0.00 3.69
4888 7258 4.826183 GGCAATAAATCATGAGCTCTCCTT 59.174 41.667 16.19 4.06 0.00 3.36
4889 7259 5.048852 GGCAATAAATCATGAGCTCTCCTTC 60.049 44.000 16.19 0.00 0.00 3.46
4890 7260 5.530171 GCAATAAATCATGAGCTCTCCTTCA 59.470 40.000 16.19 0.00 0.00 3.02
4891 7261 6.207025 GCAATAAATCATGAGCTCTCCTTCAT 59.793 38.462 16.19 0.00 0.00 2.57
4892 7262 7.389884 GCAATAAATCATGAGCTCTCCTTCATA 59.610 37.037 16.19 1.02 0.00 2.15
4893 7263 8.937884 CAATAAATCATGAGCTCTCCTTCATAG 58.062 37.037 16.19 0.00 0.00 2.23
4894 7264 4.540359 ATCATGAGCTCTCCTTCATAGC 57.460 45.455 16.19 0.00 36.48 2.97
4895 7265 2.632028 TCATGAGCTCTCCTTCATAGCC 59.368 50.000 16.19 0.00 36.92 3.93
4896 7266 2.468301 TGAGCTCTCCTTCATAGCCT 57.532 50.000 16.19 0.00 36.92 4.58
4897 7267 2.315176 TGAGCTCTCCTTCATAGCCTC 58.685 52.381 16.19 0.00 36.92 4.70
4898 7268 1.618343 GAGCTCTCCTTCATAGCCTCC 59.382 57.143 6.43 0.00 36.92 4.30
4899 7269 1.062581 AGCTCTCCTTCATAGCCTCCA 60.063 52.381 0.00 0.00 36.92 3.86
4900 7270 1.977129 GCTCTCCTTCATAGCCTCCAT 59.023 52.381 0.00 0.00 0.00 3.41
4901 7271 2.289569 GCTCTCCTTCATAGCCTCCATG 60.290 54.545 0.00 0.00 0.00 3.66
4902 7272 2.302445 CTCTCCTTCATAGCCTCCATGG 59.698 54.545 4.97 4.97 39.35 3.66
4903 7273 1.350351 CTCCTTCATAGCCTCCATGGG 59.650 57.143 13.02 2.26 36.00 4.00
4904 7274 0.403271 CCTTCATAGCCTCCATGGGG 59.597 60.000 13.02 8.75 36.00 4.96
4905 7275 0.403271 CTTCATAGCCTCCATGGGGG 59.597 60.000 28.07 28.07 36.00 5.40
4906 7276 0.029163 TTCATAGCCTCCATGGGGGA 60.029 55.000 36.32 15.67 45.89 4.81
4913 7283 2.918248 TCCATGGGGGAATCGCTG 59.082 61.111 13.02 0.00 44.80 5.18
4914 7284 2.203394 CCATGGGGGAATCGCTGG 60.203 66.667 2.85 0.00 40.01 4.85
4915 7285 2.908940 CATGGGGGAATCGCTGGC 60.909 66.667 0.00 0.00 0.00 4.85
4916 7286 3.419580 ATGGGGGAATCGCTGGCA 61.420 61.111 0.00 0.00 0.00 4.92
4917 7287 3.721370 ATGGGGGAATCGCTGGCAC 62.721 63.158 0.00 0.00 0.00 5.01
4920 7290 4.778143 GGGAATCGCTGGCACCGT 62.778 66.667 1.70 0.00 0.00 4.83
4921 7291 3.195698 GGAATCGCTGGCACCGTC 61.196 66.667 1.70 0.00 0.00 4.79
4922 7292 3.554692 GAATCGCTGGCACCGTCG 61.555 66.667 1.70 0.00 0.00 5.12
4931 7301 4.424566 GCACCGTCGCCGAGGTAA 62.425 66.667 6.04 0.00 39.00 2.85
4932 7302 2.202570 CACCGTCGCCGAGGTAAG 60.203 66.667 6.04 0.00 39.00 2.34
4933 7303 2.360350 ACCGTCGCCGAGGTAAGA 60.360 61.111 6.04 0.00 39.30 2.10
4960 7330 5.968528 GGAATGACATCCGTAGACTAGAT 57.031 43.478 0.00 0.00 0.00 1.98
4961 7331 5.704888 GGAATGACATCCGTAGACTAGATG 58.295 45.833 0.00 9.20 42.49 2.90
4962 7332 4.775058 ATGACATCCGTAGACTAGATGC 57.225 45.455 10.26 5.83 40.87 3.91
4963 7333 3.551846 TGACATCCGTAGACTAGATGCA 58.448 45.455 10.26 0.00 40.87 3.96
4964 7334 4.145052 TGACATCCGTAGACTAGATGCAT 58.855 43.478 0.00 0.00 40.87 3.96
4965 7335 4.022849 TGACATCCGTAGACTAGATGCATG 60.023 45.833 2.46 0.00 40.87 4.06
5042 7412 1.349357 AGTCAACCCCAGAAGAAGAGC 59.651 52.381 0.00 0.00 0.00 4.09
5045 7415 0.695347 AACCCCAGAAGAAGAGCAGG 59.305 55.000 0.00 0.00 0.00 4.85
5046 7416 1.204113 ACCCCAGAAGAAGAGCAGGG 61.204 60.000 0.00 0.00 39.09 4.45
5047 7417 1.606531 CCCAGAAGAAGAGCAGGGG 59.393 63.158 0.00 0.00 32.59 4.79
5048 7418 1.077858 CCAGAAGAAGAGCAGGGGC 60.078 63.158 0.00 0.00 41.61 5.80
5049 7419 1.681666 CAGAAGAAGAGCAGGGGCA 59.318 57.895 0.00 0.00 44.61 5.36
5050 7420 0.255318 CAGAAGAAGAGCAGGGGCAT 59.745 55.000 0.00 0.00 44.61 4.40
5051 7421 0.255318 AGAAGAAGAGCAGGGGCATG 59.745 55.000 0.00 0.00 44.61 4.06
5052 7422 1.379576 AAGAAGAGCAGGGGCATGC 60.380 57.895 9.90 9.90 46.88 4.06
5058 7428 4.289312 GCAGGGGCATGCTTTTTG 57.711 55.556 18.92 11.96 43.07 2.44
5059 7429 1.372307 GCAGGGGCATGCTTTTTGT 59.628 52.632 18.92 0.00 43.07 2.83
5060 7430 0.250424 GCAGGGGCATGCTTTTTGTT 60.250 50.000 18.92 0.00 43.07 2.83
5061 7431 1.815021 GCAGGGGCATGCTTTTTGTTT 60.815 47.619 18.92 0.00 43.07 2.83
5062 7432 2.574450 CAGGGGCATGCTTTTTGTTTT 58.426 42.857 18.92 0.00 0.00 2.43
5063 7433 2.291190 CAGGGGCATGCTTTTTGTTTTG 59.709 45.455 18.92 0.26 0.00 2.44
5064 7434 2.092484 AGGGGCATGCTTTTTGTTTTGT 60.092 40.909 18.92 0.00 0.00 2.83
5065 7435 2.687425 GGGGCATGCTTTTTGTTTTGTT 59.313 40.909 18.92 0.00 0.00 2.83
5066 7436 3.130164 GGGGCATGCTTTTTGTTTTGTTT 59.870 39.130 18.92 0.00 0.00 2.83
5067 7437 4.381398 GGGGCATGCTTTTTGTTTTGTTTT 60.381 37.500 18.92 0.00 0.00 2.43
5068 7438 4.562000 GGGCATGCTTTTTGTTTTGTTTTG 59.438 37.500 18.92 0.00 0.00 2.44
5069 7439 4.031539 GGCATGCTTTTTGTTTTGTTTTGC 59.968 37.500 18.92 0.00 0.00 3.68
5070 7440 4.258938 GCATGCTTTTTGTTTTGTTTTGCG 60.259 37.500 11.37 0.00 0.00 4.85
5071 7441 3.814945 TGCTTTTTGTTTTGTTTTGCGG 58.185 36.364 0.00 0.00 0.00 5.69
5072 7442 3.167425 GCTTTTTGTTTTGTTTTGCGGG 58.833 40.909 0.00 0.00 0.00 6.13
5073 7443 3.120165 GCTTTTTGTTTTGTTTTGCGGGA 60.120 39.130 0.00 0.00 0.00 5.14
5074 7444 4.399112 CTTTTTGTTTTGTTTTGCGGGAC 58.601 39.130 0.00 0.00 0.00 4.46
5075 7445 2.011540 TTGTTTTGTTTTGCGGGACC 57.988 45.000 0.00 0.00 0.00 4.46
5076 7446 0.179134 TGTTTTGTTTTGCGGGACCG 60.179 50.000 6.35 6.35 43.09 4.79
5249 7660 3.518590 GGACGTCCCTGTAGTACAAATG 58.481 50.000 24.75 1.72 0.00 2.32
5266 7677 8.511321 AGTACAAATGCTCGTTTCAAAATATGA 58.489 29.630 0.00 0.00 35.85 2.15
5267 7678 9.289303 GTACAAATGCTCGTTTCAAAATATGAT 57.711 29.630 0.00 0.00 38.03 2.45
5268 7679 8.176814 ACAAATGCTCGTTTCAAAATATGATG 57.823 30.769 0.00 0.00 38.03 3.07
5271 7682 5.639757 TGCTCGTTTCAAAATATGATGTGG 58.360 37.500 0.00 0.00 38.03 4.17
5272 7683 5.182950 TGCTCGTTTCAAAATATGATGTGGT 59.817 36.000 0.00 0.00 38.03 4.16
5273 7684 5.512788 GCTCGTTTCAAAATATGATGTGGTG 59.487 40.000 0.00 0.00 38.03 4.17
5274 7685 5.948588 TCGTTTCAAAATATGATGTGGTGG 58.051 37.500 0.00 0.00 38.03 4.61
5275 7686 5.101628 CGTTTCAAAATATGATGTGGTGGG 58.898 41.667 0.00 0.00 38.03 4.61
5276 7687 5.336372 CGTTTCAAAATATGATGTGGTGGGT 60.336 40.000 0.00 0.00 38.03 4.51
5277 7688 6.463360 GTTTCAAAATATGATGTGGTGGGTT 58.537 36.000 0.00 0.00 38.03 4.11
5278 7689 6.678568 TTCAAAATATGATGTGGTGGGTTT 57.321 33.333 0.00 0.00 38.03 3.27
5279 7690 7.782897 TTCAAAATATGATGTGGTGGGTTTA 57.217 32.000 0.00 0.00 38.03 2.01
5280 7691 7.969690 TCAAAATATGATGTGGTGGGTTTAT 57.030 32.000 0.00 0.00 31.50 1.40
5281 7692 8.372877 TCAAAATATGATGTGGTGGGTTTATT 57.627 30.769 0.00 0.00 31.50 1.40
5282 7693 8.820831 TCAAAATATGATGTGGTGGGTTTATTT 58.179 29.630 0.00 0.00 31.50 1.40
5283 7694 9.097257 CAAAATATGATGTGGTGGGTTTATTTC 57.903 33.333 0.00 0.00 0.00 2.17
5284 7695 6.976934 ATATGATGTGGTGGGTTTATTTCC 57.023 37.500 0.00 0.00 0.00 3.13
5285 7696 3.436243 TGATGTGGTGGGTTTATTTCCC 58.564 45.455 0.00 0.00 44.81 3.97
5286 7697 2.312424 TGTGGTGGGTTTATTTCCCC 57.688 50.000 0.00 0.00 44.00 4.81
5287 7698 1.790157 TGTGGTGGGTTTATTTCCCCT 59.210 47.619 0.00 0.00 44.00 4.79
5288 7699 2.225167 TGTGGTGGGTTTATTTCCCCTC 60.225 50.000 0.00 0.00 44.00 4.30
5289 7700 2.074579 TGGTGGGTTTATTTCCCCTCA 58.925 47.619 0.00 0.00 44.00 3.86
5290 7701 2.451273 TGGTGGGTTTATTTCCCCTCAA 59.549 45.455 0.00 0.00 44.00 3.02
5291 7702 3.116707 TGGTGGGTTTATTTCCCCTCAAA 60.117 43.478 0.00 0.00 44.00 2.69
5292 7703 3.904965 GGTGGGTTTATTTCCCCTCAAAA 59.095 43.478 0.00 0.00 44.00 2.44
5293 7704 4.348461 GGTGGGTTTATTTCCCCTCAAAAA 59.652 41.667 0.00 0.00 44.00 1.94
5294 7705 5.512404 GGTGGGTTTATTTCCCCTCAAAAAG 60.512 44.000 0.00 0.00 44.00 2.27
5295 7706 5.305902 GTGGGTTTATTTCCCCTCAAAAAGA 59.694 40.000 0.00 0.00 44.00 2.52
5296 7707 5.905913 TGGGTTTATTTCCCCTCAAAAAGAA 59.094 36.000 0.00 0.00 44.00 2.52
5297 7708 6.387220 TGGGTTTATTTCCCCTCAAAAAGAAA 59.613 34.615 0.00 0.00 44.00 2.52
5298 7709 7.092399 TGGGTTTATTTCCCCTCAAAAAGAAAA 60.092 33.333 0.00 0.00 44.00 2.29
5299 7710 7.776030 GGGTTTATTTCCCCTCAAAAAGAAAAA 59.224 33.333 0.00 0.00 39.08 1.94
5300 7711 9.349713 GGTTTATTTCCCCTCAAAAAGAAAAAT 57.650 29.630 0.00 0.00 30.18 1.82
5363 7774 5.649557 TGCACAATACAAACTTGCATATCC 58.350 37.500 0.00 0.00 38.25 2.59
5364 7775 5.418524 TGCACAATACAAACTTGCATATCCT 59.581 36.000 0.00 0.00 38.25 3.24
5365 7776 5.973565 GCACAATACAAACTTGCATATCCTC 59.026 40.000 0.00 0.00 33.24 3.71
5366 7777 6.498304 CACAATACAAACTTGCATATCCTCC 58.502 40.000 0.00 0.00 0.00 4.30
5367 7778 5.594317 ACAATACAAACTTGCATATCCTCCC 59.406 40.000 0.00 0.00 0.00 4.30
5368 7779 3.018423 ACAAACTTGCATATCCTCCCC 57.982 47.619 0.00 0.00 0.00 4.81
5369 7780 2.311542 ACAAACTTGCATATCCTCCCCA 59.688 45.455 0.00 0.00 0.00 4.96
5370 7781 2.954318 CAAACTTGCATATCCTCCCCAG 59.046 50.000 0.00 0.00 0.00 4.45
5371 7782 1.143813 ACTTGCATATCCTCCCCAGG 58.856 55.000 0.00 0.00 42.01 4.45
5372 7783 0.403271 CTTGCATATCCTCCCCAGGG 59.597 60.000 0.00 0.00 40.80 4.45
5373 7784 0.029163 TTGCATATCCTCCCCAGGGA 60.029 55.000 7.25 6.32 40.80 4.20
5374 7785 0.029163 TGCATATCCTCCCCAGGGAA 60.029 55.000 7.25 0.00 44.66 3.97
5375 7786 1.376649 GCATATCCTCCCCAGGGAAT 58.623 55.000 7.25 0.99 44.66 3.01
5376 7787 1.283321 GCATATCCTCCCCAGGGAATC 59.717 57.143 7.25 0.00 44.66 2.52
5377 7788 2.636005 CATATCCTCCCCAGGGAATCA 58.364 52.381 7.25 0.00 44.66 2.57
5378 7789 2.118403 TATCCTCCCCAGGGAATCAC 57.882 55.000 7.25 0.00 44.66 3.06
5379 7790 0.348370 ATCCTCCCCAGGGAATCACT 59.652 55.000 7.25 0.00 44.66 3.41
5380 7791 0.621571 TCCTCCCCAGGGAATCACTG 60.622 60.000 7.25 5.33 44.66 3.66
5381 7792 1.225704 CTCCCCAGGGAATCACTGC 59.774 63.158 7.25 0.00 44.66 4.40
5382 7793 1.229951 TCCCCAGGGAATCACTGCT 60.230 57.895 7.25 0.00 42.05 4.24
5383 7794 1.077212 CCCCAGGGAATCACTGCTG 60.077 63.158 7.25 0.00 37.50 4.41
5384 7795 1.077212 CCCAGGGAATCACTGCTGG 60.077 63.158 7.06 0.00 34.65 4.85
5385 7796 1.751927 CCAGGGAATCACTGCTGGC 60.752 63.158 7.06 0.00 34.65 4.85
5386 7797 1.302285 CAGGGAATCACTGCTGGCT 59.698 57.895 0.00 0.00 0.00 4.75
5387 7798 1.030488 CAGGGAATCACTGCTGGCTG 61.030 60.000 0.00 0.00 0.00 4.85
5388 7799 1.751927 GGGAATCACTGCTGGCTGG 60.752 63.158 4.64 0.00 0.00 4.85
5389 7800 2.413142 GGAATCACTGCTGGCTGGC 61.413 63.158 0.00 0.00 0.00 4.85
5390 7801 1.378250 GAATCACTGCTGGCTGGCT 60.378 57.895 2.00 0.00 0.00 4.75
5391 7802 0.107508 GAATCACTGCTGGCTGGCTA 60.108 55.000 2.00 0.00 0.00 3.93
5392 7803 0.107312 AATCACTGCTGGCTGGCTAG 60.107 55.000 2.00 1.54 0.00 3.42
5393 7804 1.270414 ATCACTGCTGGCTGGCTAGT 61.270 55.000 7.70 1.87 0.00 2.57
5394 7805 1.449246 CACTGCTGGCTGGCTAGTC 60.449 63.158 7.70 0.00 0.00 2.59
5395 7806 1.611851 ACTGCTGGCTGGCTAGTCT 60.612 57.895 2.50 0.00 0.00 3.24
5396 7807 0.324738 ACTGCTGGCTGGCTAGTCTA 60.325 55.000 2.50 0.00 0.00 2.59
5397 7808 1.047002 CTGCTGGCTGGCTAGTCTAT 58.953 55.000 2.50 0.00 0.00 1.98
5398 7809 1.000731 CTGCTGGCTGGCTAGTCTATC 59.999 57.143 2.50 0.00 0.00 2.08
5399 7810 0.320050 GCTGGCTGGCTAGTCTATCC 59.680 60.000 2.50 0.00 0.00 2.59
5400 7811 0.972883 CTGGCTGGCTAGTCTATCCC 59.027 60.000 2.50 0.00 0.00 3.85
5401 7812 0.264657 TGGCTGGCTAGTCTATCCCA 59.735 55.000 2.50 0.00 0.00 4.37
5402 7813 1.132721 TGGCTGGCTAGTCTATCCCAT 60.133 52.381 2.50 0.00 0.00 4.00
5403 7814 1.981495 GGCTGGCTAGTCTATCCCATT 59.019 52.381 0.00 0.00 0.00 3.16
5404 7815 2.373502 GGCTGGCTAGTCTATCCCATTT 59.626 50.000 0.00 0.00 0.00 2.32
5405 7816 3.558109 GGCTGGCTAGTCTATCCCATTTC 60.558 52.174 0.00 0.00 0.00 2.17
5406 7817 3.558109 GCTGGCTAGTCTATCCCATTTCC 60.558 52.174 0.00 0.00 0.00 3.13
5407 7818 3.648067 CTGGCTAGTCTATCCCATTTCCA 59.352 47.826 0.00 0.00 0.00 3.53
5448 7859 4.414337 GGCAGATTATGACTCTGACCTT 57.586 45.455 4.57 0.00 42.01 3.50
5454 7865 0.617413 ATGACTCTGACCTTGCAGGG 59.383 55.000 14.35 14.35 40.58 4.45
5465 7876 1.363744 CTTGCAGGGTAAAGCGAGAG 58.636 55.000 0.00 0.00 43.47 3.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
188 189 3.308117 CCCTAGCTGGATGTTGGTACAAA 60.308 47.826 0.00 0.00 40.96 2.83
427 431 9.157104 GGAAAAAGTTCACATAAACCTCAAAAA 57.843 29.630 0.00 0.00 35.25 1.94
428 432 8.536175 AGGAAAAAGTTCACATAAACCTCAAAA 58.464 29.630 0.00 0.00 35.25 2.44
429 433 7.978975 CAGGAAAAAGTTCACATAAACCTCAAA 59.021 33.333 0.00 0.00 35.25 2.69
430 434 7.417342 CCAGGAAAAAGTTCACATAAACCTCAA 60.417 37.037 0.00 0.00 35.25 3.02
431 435 6.040391 CCAGGAAAAAGTTCACATAAACCTCA 59.960 38.462 0.00 0.00 35.25 3.86
432 436 6.447162 CCAGGAAAAAGTTCACATAAACCTC 58.553 40.000 0.00 0.00 35.25 3.85
433 437 5.304357 CCCAGGAAAAAGTTCACATAAACCT 59.696 40.000 0.00 0.00 35.25 3.50
434 438 5.303333 TCCCAGGAAAAAGTTCACATAAACC 59.697 40.000 0.00 0.00 35.25 3.27
435 439 6.264518 TCTCCCAGGAAAAAGTTCACATAAAC 59.735 38.462 0.00 0.00 35.25 2.01
436 440 6.369629 TCTCCCAGGAAAAAGTTCACATAAA 58.630 36.000 0.00 0.00 35.25 1.40
437 441 5.947663 TCTCCCAGGAAAAAGTTCACATAA 58.052 37.500 0.00 0.00 35.25 1.90
438 442 5.576563 TCTCCCAGGAAAAAGTTCACATA 57.423 39.130 0.00 0.00 35.25 2.29
439 443 4.453480 TCTCCCAGGAAAAAGTTCACAT 57.547 40.909 0.00 0.00 35.25 3.21
440 444 3.943671 TCTCCCAGGAAAAAGTTCACA 57.056 42.857 0.00 0.00 35.25 3.58
441 445 4.145052 ACATCTCCCAGGAAAAAGTTCAC 58.855 43.478 0.00 0.00 35.25 3.18
442 446 4.453480 ACATCTCCCAGGAAAAAGTTCA 57.547 40.909 0.00 0.00 35.25 3.18
443 447 5.301805 TCAAACATCTCCCAGGAAAAAGTTC 59.698 40.000 0.00 0.00 0.00 3.01
444 448 5.208121 TCAAACATCTCCCAGGAAAAAGTT 58.792 37.500 0.00 0.00 0.00 2.66
445 449 4.803452 TCAAACATCTCCCAGGAAAAAGT 58.197 39.130 0.00 0.00 0.00 2.66
446 450 5.990120 ATCAAACATCTCCCAGGAAAAAG 57.010 39.130 0.00 0.00 0.00 2.27
447 451 5.837979 TCAATCAAACATCTCCCAGGAAAAA 59.162 36.000 0.00 0.00 0.00 1.94
448 452 5.392995 TCAATCAAACATCTCCCAGGAAAA 58.607 37.500 0.00 0.00 0.00 2.29
449 453 4.996793 TCAATCAAACATCTCCCAGGAAA 58.003 39.130 0.00 0.00 0.00 3.13
450 454 4.656100 TCAATCAAACATCTCCCAGGAA 57.344 40.909 0.00 0.00 0.00 3.36
451 455 4.656100 TTCAATCAAACATCTCCCAGGA 57.344 40.909 0.00 0.00 0.00 3.86
452 456 4.768968 ACTTTCAATCAAACATCTCCCAGG 59.231 41.667 0.00 0.00 0.00 4.45
453 457 5.972107 ACTTTCAATCAAACATCTCCCAG 57.028 39.130 0.00 0.00 0.00 4.45
454 458 5.010922 CCAACTTTCAATCAAACATCTCCCA 59.989 40.000 0.00 0.00 0.00 4.37
500 504 0.538057 CAAGCAAGTCTGGGGCTGAA 60.538 55.000 0.00 0.00 38.04 3.02
539 576 3.434641 GGTTAAACTCGGTTCAAGTAGCC 59.565 47.826 0.00 0.00 0.00 3.93
541 578 4.549458 TCGGTTAAACTCGGTTCAAGTAG 58.451 43.478 0.00 0.00 0.00 2.57
549 618 0.393820 TTGCCTCGGTTAAACTCGGT 59.606 50.000 0.00 0.00 0.00 4.69
639 708 7.007723 AGTTAAATTGAGAACACACCCCATAA 58.992 34.615 2.17 0.00 0.00 1.90
667 739 6.460664 TGACGGCATATAACACATATTTCG 57.539 37.500 0.00 0.00 0.00 3.46
668 740 8.953990 GTTTTGACGGCATATAACACATATTTC 58.046 33.333 0.00 0.00 0.00 2.17
681 753 5.786311 ACTTGTAGTAGTTTTGACGGCATA 58.214 37.500 0.00 0.00 0.00 3.14
682 754 4.638304 ACTTGTAGTAGTTTTGACGGCAT 58.362 39.130 0.00 0.00 0.00 4.40
730 802 7.425224 TTTTAGGTCTTCAATTTGGGAAACA 57.575 32.000 0.00 0.00 0.00 2.83
736 808 5.696270 GCAGGTTTTTAGGTCTTCAATTTGG 59.304 40.000 0.00 0.00 0.00 3.28
742 814 3.202829 ACGCAGGTTTTTAGGTCTTCA 57.797 42.857 0.00 0.00 0.00 3.02
743 815 3.562557 TCAACGCAGGTTTTTAGGTCTTC 59.437 43.478 0.00 0.00 32.98 2.87
746 818 2.031420 GGTCAACGCAGGTTTTTAGGTC 60.031 50.000 0.00 0.00 32.98 3.85
748 820 1.268625 GGGTCAACGCAGGTTTTTAGG 59.731 52.381 0.00 0.00 32.98 2.69
755 827 0.470766 TTTGTAGGGTCAACGCAGGT 59.529 50.000 0.00 0.00 0.00 4.00
763 835 5.677319 CTCTAATGAGGTTTGTAGGGTCA 57.323 43.478 0.00 0.00 36.70 4.02
780 879 8.611051 AAGCTAGACTTTTCTAATCCCTCTAA 57.389 34.615 0.00 0.00 33.71 2.10
789 888 9.490379 AATTTTCGAGAAGCTAGACTTTTCTAA 57.510 29.630 0.00 0.00 39.29 2.10
801 900 5.235516 TCCGTTTAGAATTTTCGAGAAGCT 58.764 37.500 0.00 0.00 0.00 3.74
827 927 3.394674 TCACACTGCTTACGATTCCAA 57.605 42.857 0.00 0.00 0.00 3.53
828 928 3.394674 TTCACACTGCTTACGATTCCA 57.605 42.857 0.00 0.00 0.00 3.53
829 929 4.742438 TTTTCACACTGCTTACGATTCC 57.258 40.909 0.00 0.00 0.00 3.01
832 932 9.691362 ATTTTTAATTTTCACACTGCTTACGAT 57.309 25.926 0.00 0.00 0.00 3.73
935 1037 3.703556 TGAAACAGGAAGAATTGTTGCCA 59.296 39.130 3.10 0.00 37.57 4.92
937 1039 5.531634 TGATGAAACAGGAAGAATTGTTGC 58.468 37.500 0.00 0.00 37.57 4.17
938 1040 7.487189 GCTATGATGAAACAGGAAGAATTGTTG 59.513 37.037 0.00 0.00 37.57 3.33
940 1042 6.183360 CGCTATGATGAAACAGGAAGAATTGT 60.183 38.462 0.00 0.00 0.00 2.71
941 1043 6.037500 TCGCTATGATGAAACAGGAAGAATTG 59.962 38.462 0.00 0.00 0.00 2.32
943 1045 5.674525 TCGCTATGATGAAACAGGAAGAAT 58.325 37.500 0.00 0.00 0.00 2.40
944 1046 5.084818 TCGCTATGATGAAACAGGAAGAA 57.915 39.130 0.00 0.00 0.00 2.52
945 1047 4.736126 TCGCTATGATGAAACAGGAAGA 57.264 40.909 0.00 0.00 0.00 2.87
946 1048 4.260538 GCTTCGCTATGATGAAACAGGAAG 60.261 45.833 0.00 0.00 33.39 3.46
964 1069 1.953686 TGAAGTTTTCCCCTTGCTTCG 59.046 47.619 0.00 0.00 38.58 3.79
965 1070 2.035961 GGTGAAGTTTTCCCCTTGCTTC 59.964 50.000 0.00 0.00 36.89 3.86
1371 1634 1.221466 GCAGTACGCACTTGTGCTCA 61.221 55.000 21.17 7.88 41.79 4.26
1388 1651 3.603532 CAAAATACAGAGCAGAGGAGCA 58.396 45.455 0.00 0.00 36.85 4.26
1439 1702 7.833285 AGACAAAACTATTGGGTACAAATGT 57.167 32.000 0.00 0.00 40.55 2.71
1441 1704 8.387813 TCCTAGACAAAACTATTGGGTACAAAT 58.612 33.333 0.00 0.00 40.55 2.32
1442 1705 7.747690 TCCTAGACAAAACTATTGGGTACAAA 58.252 34.615 0.00 0.00 40.55 2.83
1443 1706 7.319052 TCCTAGACAAAACTATTGGGTACAA 57.681 36.000 0.00 0.00 41.59 2.41
1444 1707 6.938698 TCCTAGACAAAACTATTGGGTACA 57.061 37.500 0.00 0.00 0.00 2.90
1445 1708 7.827729 ACAATCCTAGACAAAACTATTGGGTAC 59.172 37.037 0.00 0.00 0.00 3.34
1446 1709 7.924541 ACAATCCTAGACAAAACTATTGGGTA 58.075 34.615 0.00 0.00 0.00 3.69
1447 1710 6.790319 ACAATCCTAGACAAAACTATTGGGT 58.210 36.000 0.00 0.00 0.00 4.51
1448 1711 8.265055 TCTACAATCCTAGACAAAACTATTGGG 58.735 37.037 0.00 0.00 0.00 4.12
1449 1712 9.838339 ATCTACAATCCTAGACAAAACTATTGG 57.162 33.333 0.00 0.00 0.00 3.16
1452 1715 9.331282 GCAATCTACAATCCTAGACAAAACTAT 57.669 33.333 0.00 0.00 0.00 2.12
1453 1716 8.540388 AGCAATCTACAATCCTAGACAAAACTA 58.460 33.333 0.00 0.00 0.00 2.24
1454 1717 7.398024 AGCAATCTACAATCCTAGACAAAACT 58.602 34.615 0.00 0.00 0.00 2.66
1455 1718 7.334421 TGAGCAATCTACAATCCTAGACAAAAC 59.666 37.037 0.00 0.00 0.00 2.43
1456 1719 7.394016 TGAGCAATCTACAATCCTAGACAAAA 58.606 34.615 0.00 0.00 0.00 2.44
1468 1731 3.490896 GCGATCGAATGAGCAATCTACAA 59.509 43.478 21.57 0.00 0.00 2.41
1486 1749 0.723414 CGATCAAACAGCAGTGCGAT 59.277 50.000 10.00 5.78 0.00 4.58
1489 1752 1.154150 GCCGATCAAACAGCAGTGC 60.154 57.895 7.13 7.13 0.00 4.40
1492 1755 1.869767 GGATAGCCGATCAAACAGCAG 59.130 52.381 0.00 0.00 36.12 4.24
1567 1830 0.814457 TTGTTGGCACTTGTTTCGCT 59.186 45.000 0.00 0.00 0.00 4.93
1570 1833 5.982516 TCATATGTTTGTTGGCACTTGTTTC 59.017 36.000 1.90 0.00 0.00 2.78
1579 1842 8.477984 AACACATTAATCATATGTTTGTTGGC 57.522 30.769 8.93 0.00 34.11 4.52
1597 1876 4.229096 CGCAGCAGAATTACAAACACATT 58.771 39.130 0.00 0.00 0.00 2.71
1621 1900 4.804139 ACATCATAAAAGACGACGGCTAAG 59.196 41.667 2.15 0.00 0.00 2.18
1627 1906 2.930040 AGCCACATCATAAAAGACGACG 59.070 45.455 0.00 0.00 0.00 5.12
1630 1909 5.332581 CGACATAGCCACATCATAAAAGACG 60.333 44.000 0.00 0.00 0.00 4.18
1632 1911 5.912892 TCGACATAGCCACATCATAAAAGA 58.087 37.500 0.00 0.00 0.00 2.52
1639 1918 4.122046 CTCAATTCGACATAGCCACATCA 58.878 43.478 0.00 0.00 0.00 3.07
1645 1924 3.270877 ACCAACTCAATTCGACATAGCC 58.729 45.455 0.00 0.00 0.00 3.93
1647 1926 7.904977 CACAATTACCAACTCAATTCGACATAG 59.095 37.037 0.00 0.00 0.00 2.23
1649 1928 6.206634 ACACAATTACCAACTCAATTCGACAT 59.793 34.615 0.00 0.00 0.00 3.06
1871 2150 9.667107 TTTAACCAGTAGAGGAATACATGAAAG 57.333 33.333 0.00 0.00 0.00 2.62
1905 2184 9.111613 CATGGAAACGGTAGTGGTAAATTTATA 57.888 33.333 0.31 0.00 0.00 0.98
1908 2187 5.771165 ACATGGAAACGGTAGTGGTAAATTT 59.229 36.000 0.00 0.00 0.00 1.82
1914 2193 3.773119 AGATACATGGAAACGGTAGTGGT 59.227 43.478 0.00 0.00 0.00 4.16
2014 2293 7.598278 ACTATCATCCATAGAAAACGAGCTAG 58.402 38.462 0.00 0.00 37.27 3.42
2096 2393 7.253422 CAGTGAGAAGACAAATGAAACAAAGT 58.747 34.615 0.00 0.00 0.00 2.66
2122 2419 9.664332 CAGATATATTCCCAACTATTTCCAGAG 57.336 37.037 0.00 0.00 0.00 3.35
2165 2462 6.303054 TGAGAATTCCACCAAAATGTACTCA 58.697 36.000 0.65 0.00 0.00 3.41
2168 2465 7.396540 AGATGAGAATTCCACCAAAATGTAC 57.603 36.000 0.65 0.00 0.00 2.90
2184 2481 5.958380 AGTAGTGTTGTATGGGAGATGAGAA 59.042 40.000 0.00 0.00 0.00 2.87
2221 2518 0.746659 AGCAACCAAACTTGCCAGTC 59.253 50.000 0.32 0.00 46.63 3.51
2229 2526 3.402628 AGATGTACGAGCAACCAAACT 57.597 42.857 0.00 0.00 0.00 2.66
2242 2539 5.746990 AGGGATAGGCATGTTAGATGTAC 57.253 43.478 0.00 0.00 0.00 2.90
2416 2713 0.821711 TCGTGGCAAAGAAGGGTTGG 60.822 55.000 0.00 0.00 0.00 3.77
2619 2916 3.065019 TGAACGTTTGAGCTTTGCTTC 57.935 42.857 0.46 0.00 39.88 3.86
2634 2931 4.457834 ACAGAGGGAGTAGAAATGAACG 57.542 45.455 0.00 0.00 0.00 3.95
2644 2941 4.607239 AGTATTTCCGAACAGAGGGAGTA 58.393 43.478 0.00 0.00 33.01 2.59
2645 2942 3.442076 AGTATTTCCGAACAGAGGGAGT 58.558 45.455 0.00 0.00 33.01 3.85
2646 2943 4.184629 CAAGTATTTCCGAACAGAGGGAG 58.815 47.826 0.00 0.00 33.01 4.30
2647 2944 3.581332 ACAAGTATTTCCGAACAGAGGGA 59.419 43.478 0.00 0.00 0.00 4.20
2648 2945 3.933332 GACAAGTATTTCCGAACAGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
2649 2946 3.612860 CGACAAGTATTTCCGAACAGAGG 59.387 47.826 0.00 0.00 0.00 3.69
2650 2947 3.612860 CCGACAAGTATTTCCGAACAGAG 59.387 47.826 0.00 0.00 0.00 3.35
2651 2948 3.256383 TCCGACAAGTATTTCCGAACAGA 59.744 43.478 0.00 0.00 0.00 3.41
2652 2949 3.581755 TCCGACAAGTATTTCCGAACAG 58.418 45.455 0.00 0.00 0.00 3.16
2653 2950 3.256383 TCTCCGACAAGTATTTCCGAACA 59.744 43.478 0.00 0.00 0.00 3.18
2654 2951 3.841643 TCTCCGACAAGTATTTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
2655 2952 4.524316 TTCTCCGACAAGTATTTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
2656 2953 4.524316 TTTCTCCGACAAGTATTTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
2657 2954 4.026804 CGATTTCTCCGACAAGTATTTCCG 60.027 45.833 0.00 0.00 0.00 4.30
2658 2955 5.107133 TCGATTTCTCCGACAAGTATTTCC 58.893 41.667 0.00 0.00 0.00 3.13
2659 2956 6.255887 ACATCGATTTCTCCGACAAGTATTTC 59.744 38.462 0.00 0.00 38.97 2.17
2660 2957 6.106673 ACATCGATTTCTCCGACAAGTATTT 58.893 36.000 0.00 0.00 38.97 1.40
2661 2958 5.661458 ACATCGATTTCTCCGACAAGTATT 58.339 37.500 0.00 0.00 38.97 1.89
2662 2959 5.263968 ACATCGATTTCTCCGACAAGTAT 57.736 39.130 0.00 0.00 38.97 2.12
2663 2960 4.713824 ACATCGATTTCTCCGACAAGTA 57.286 40.909 0.00 0.00 38.97 2.24
2664 2961 3.594603 ACATCGATTTCTCCGACAAGT 57.405 42.857 0.00 0.00 38.97 3.16
2665 2962 5.524284 AGATACATCGATTTCTCCGACAAG 58.476 41.667 0.00 0.00 38.97 3.16
2666 2963 5.515797 AGATACATCGATTTCTCCGACAA 57.484 39.130 0.00 0.00 38.97 3.18
2667 2964 5.995897 TCTAGATACATCGATTTCTCCGACA 59.004 40.000 0.00 0.00 38.97 4.35
2668 2965 6.483385 TCTAGATACATCGATTTCTCCGAC 57.517 41.667 0.00 0.00 38.97 4.79
2669 2966 6.711194 AGTTCTAGATACATCGATTTCTCCGA 59.289 38.462 0.00 0.00 40.53 4.55
2670 2967 6.904498 AGTTCTAGATACATCGATTTCTCCG 58.096 40.000 0.00 0.00 0.00 4.63
2695 2992 9.303116 AGAGATGGATGTATCTAGACGTATTTT 57.697 33.333 0.00 0.00 37.53 1.82
2696 2993 8.871629 AGAGATGGATGTATCTAGACGTATTT 57.128 34.615 0.00 0.00 37.53 1.40
2697 2994 8.871629 AAGAGATGGATGTATCTAGACGTATT 57.128 34.615 0.00 0.00 37.53 1.89
2698 2995 7.279090 CGAAGAGATGGATGTATCTAGACGTAT 59.721 40.741 0.00 0.00 37.53 3.06
2699 2996 6.590677 CGAAGAGATGGATGTATCTAGACGTA 59.409 42.308 0.00 0.00 37.53 3.57
2700 2997 5.410132 CGAAGAGATGGATGTATCTAGACGT 59.590 44.000 0.00 0.00 37.53 4.34
2701 2998 5.639931 TCGAAGAGATGGATGTATCTAGACG 59.360 44.000 0.00 0.00 37.53 4.18
2702 2999 7.624360 ATCGAAGAGATGGATGTATCTAGAC 57.376 40.000 0.00 0.00 43.63 2.59
2716 3013 6.210078 GTTCGGAAATACTCATCGAAGAGAT 58.790 40.000 23.46 10.06 43.63 2.75
2717 3014 5.579718 GTTCGGAAATACTCATCGAAGAGA 58.420 41.667 23.46 8.24 43.63 3.10
2718 3015 4.438145 CGTTCGGAAATACTCATCGAAGAG 59.562 45.833 15.77 15.77 43.63 2.85
2719 3016 4.348656 CGTTCGGAAATACTCATCGAAGA 58.651 43.478 0.00 0.00 39.89 2.87
2720 3017 3.486108 CCGTTCGGAAATACTCATCGAAG 59.514 47.826 5.19 0.00 39.89 3.79
2721 3018 3.129113 TCCGTTCGGAAATACTCATCGAA 59.871 43.478 11.66 0.00 37.48 3.71
2722 3019 2.684374 TCCGTTCGGAAATACTCATCGA 59.316 45.455 11.66 0.00 0.00 3.59
2723 3020 3.043586 CTCCGTTCGGAAATACTCATCG 58.956 50.000 14.79 0.00 33.41 3.84
2724 3021 3.381949 CCTCCGTTCGGAAATACTCATC 58.618 50.000 14.79 0.00 33.41 2.92
2725 3022 2.102588 CCCTCCGTTCGGAAATACTCAT 59.897 50.000 14.79 0.00 33.41 2.90
2726 3023 1.479323 CCCTCCGTTCGGAAATACTCA 59.521 52.381 14.79 0.00 33.41 3.41
2727 3024 1.753073 TCCCTCCGTTCGGAAATACTC 59.247 52.381 14.79 0.00 33.41 2.59
2728 3025 1.755380 CTCCCTCCGTTCGGAAATACT 59.245 52.381 14.79 0.00 33.41 2.12
2729 3026 1.479730 ACTCCCTCCGTTCGGAAATAC 59.520 52.381 14.79 0.00 33.41 1.89
2730 3027 1.856629 ACTCCCTCCGTTCGGAAATA 58.143 50.000 14.79 2.82 33.41 1.40
2731 3028 1.856629 TACTCCCTCCGTTCGGAAAT 58.143 50.000 14.79 2.39 33.41 2.17
2732 3029 1.856629 ATACTCCCTCCGTTCGGAAA 58.143 50.000 14.79 3.49 33.41 3.13
2733 3030 2.734755 TATACTCCCTCCGTTCGGAA 57.265 50.000 14.79 0.00 33.41 4.30
2734 3031 2.734755 TTATACTCCCTCCGTTCGGA 57.265 50.000 13.34 13.34 0.00 4.55
2735 3032 4.332428 AAATTATACTCCCTCCGTTCGG 57.668 45.455 4.74 4.74 0.00 4.30
2736 3033 6.323203 TCTAAATTATACTCCCTCCGTTCG 57.677 41.667 0.00 0.00 0.00 3.95
2737 3034 7.495055 TGTTCTAAATTATACTCCCTCCGTTC 58.505 38.462 0.00 0.00 0.00 3.95
2738 3035 7.427989 TGTTCTAAATTATACTCCCTCCGTT 57.572 36.000 0.00 0.00 0.00 4.44
2739 3036 7.613551 ATGTTCTAAATTATACTCCCTCCGT 57.386 36.000 0.00 0.00 0.00 4.69
2893 3956 4.395231 GGCTACAGAACTACAAAATGGACC 59.605 45.833 0.00 0.00 0.00 4.46
2932 3997 2.455674 ACGTTCAACATGCTAGCAGA 57.544 45.000 23.89 11.89 0.00 4.26
3220 4286 2.050144 CATCCCTACACATAGGCTGGT 58.950 52.381 0.00 0.00 46.18 4.00
3269 4335 3.118186 ACATTGCCCTTGTATTAGCGGTA 60.118 43.478 0.00 0.00 0.00 4.02
3552 4637 0.998145 AAAGGAGCTTGCCAGAGGAT 59.002 50.000 0.00 0.00 0.00 3.24
3553 4638 0.037303 CAAAGGAGCTTGCCAGAGGA 59.963 55.000 0.00 0.00 0.00 3.71
3554 4639 0.251077 ACAAAGGAGCTTGCCAGAGG 60.251 55.000 0.00 0.00 0.00 3.69
3555 4640 1.613836 AACAAAGGAGCTTGCCAGAG 58.386 50.000 0.00 0.00 0.00 3.35
3556 4641 2.071778 AAACAAAGGAGCTTGCCAGA 57.928 45.000 0.00 0.00 0.00 3.86
3557 4642 2.896745 AAAACAAAGGAGCTTGCCAG 57.103 45.000 0.00 0.00 0.00 4.85
3625 4713 8.708742 GCGCATATCACAATCTAAGTATGTAAA 58.291 33.333 0.30 0.00 0.00 2.01
3626 4714 7.870445 TGCGCATATCACAATCTAAGTATGTAA 59.130 33.333 5.66 0.00 0.00 2.41
3627 4715 7.375053 TGCGCATATCACAATCTAAGTATGTA 58.625 34.615 5.66 0.00 0.00 2.29
3628 4716 6.223120 TGCGCATATCACAATCTAAGTATGT 58.777 36.000 5.66 0.00 0.00 2.29
3629 4717 6.710692 TGCGCATATCACAATCTAAGTATG 57.289 37.500 5.66 0.00 0.00 2.39
3630 4718 7.912056 ATTGCGCATATCACAATCTAAGTAT 57.088 32.000 12.75 0.00 27.91 2.12
3633 4721 6.147656 TGGTATTGCGCATATCACAATCTAAG 59.852 38.462 12.75 0.00 35.68 2.18
3637 4725 4.747540 TGGTATTGCGCATATCACAATC 57.252 40.909 12.75 0.00 35.68 2.67
3650 4738 6.650390 AGGAAATTGACACAAAATGGTATTGC 59.350 34.615 0.00 0.00 0.00 3.56
3666 4754 7.225145 CACAAAATTCAGAAGCAAGGAAATTGA 59.775 33.333 0.00 0.00 41.83 2.57
3668 4756 7.274447 TCACAAAATTCAGAAGCAAGGAAATT 58.726 30.769 0.00 0.00 0.00 1.82
3729 4817 9.665719 TCACTTCTGCTGTATATCACAAAATAA 57.334 29.630 0.00 0.00 36.48 1.40
3730 4818 9.836864 ATCACTTCTGCTGTATATCACAAAATA 57.163 29.630 0.00 0.00 36.48 1.40
3741 4870 6.482641 CAGCAAGATAATCACTTCTGCTGTAT 59.517 38.462 11.91 0.00 38.22 2.29
3743 4872 4.634883 CAGCAAGATAATCACTTCTGCTGT 59.365 41.667 11.91 0.00 38.22 4.40
3749 4878 3.626670 AGCAGCAGCAAGATAATCACTTC 59.373 43.478 3.17 0.00 45.49 3.01
3791 4920 4.853743 CGAAATTCTCCTGCTGTTTTTAGC 59.146 41.667 0.00 0.00 43.95 3.09
3792 4921 6.002062 ACGAAATTCTCCTGCTGTTTTTAG 57.998 37.500 0.00 0.00 0.00 1.85
3793 4922 6.708949 AGTACGAAATTCTCCTGCTGTTTTTA 59.291 34.615 0.00 0.00 0.00 1.52
3794 4923 4.918810 ACGAAATTCTCCTGCTGTTTTT 57.081 36.364 0.00 0.00 0.00 1.94
3795 4924 5.049405 CAGTACGAAATTCTCCTGCTGTTTT 60.049 40.000 0.00 0.00 0.00 2.43
3796 4925 4.452455 CAGTACGAAATTCTCCTGCTGTTT 59.548 41.667 0.00 0.00 0.00 2.83
3797 4926 3.997021 CAGTACGAAATTCTCCTGCTGTT 59.003 43.478 0.00 0.00 0.00 3.16
3798 4927 3.589988 CAGTACGAAATTCTCCTGCTGT 58.410 45.455 0.00 0.00 0.00 4.40
3802 4931 3.589988 AGTGCAGTACGAAATTCTCCTG 58.410 45.455 0.00 0.00 0.00 3.86
3866 4995 7.395190 TCAGACAAAGAACATTCCATAATGG 57.605 36.000 0.00 0.00 45.72 3.16
3904 5033 2.287103 CGTCGTCCTCGTCATCTATCAA 59.713 50.000 0.00 0.00 38.33 2.57
3927 5056 3.438216 TCATCCTTGTCAGCCATTTCA 57.562 42.857 0.00 0.00 0.00 2.69
3991 5120 9.108284 TGACATCAAGCATTATTCGATTAGAAA 57.892 29.630 0.00 0.00 42.91 2.52
4176 5305 5.111293 CAAATGAAGCAAGGTGAAACAAGT 58.889 37.500 0.00 0.00 39.98 3.16
4207 5336 5.127194 GGGGAGAACAAAGAAAGTGAAGTTT 59.873 40.000 0.00 0.00 0.00 2.66
4390 5523 1.060713 CACAAAGTGTAGGCGACGAG 58.939 55.000 0.00 0.00 0.00 4.18
4437 5571 3.763057 ACAAAATACACAGTTCCCTCCC 58.237 45.455 0.00 0.00 0.00 4.30
4500 5635 8.376270 CCTCCCTCCGTAAAGAAATATAAGAAT 58.624 37.037 0.00 0.00 0.00 2.40
4501 5636 7.202066 CCCTCCCTCCGTAAAGAAATATAAGAA 60.202 40.741 0.00 0.00 0.00 2.52
4518 5665 3.331718 ACATAAGTACTCCCTCCCTCC 57.668 52.381 0.00 0.00 0.00 4.30
4519 5666 5.695424 AAAACATAAGTACTCCCTCCCTC 57.305 43.478 0.00 0.00 0.00 4.30
4520 5667 6.352823 GCTAAAAACATAAGTACTCCCTCCCT 60.353 42.308 0.00 0.00 0.00 4.20
4521 5668 5.821470 GCTAAAAACATAAGTACTCCCTCCC 59.179 44.000 0.00 0.00 0.00 4.30
4548 5695 8.746751 CAGTGTATCTAATTCAACATAGTGTCG 58.253 37.037 0.00 0.00 0.00 4.35
4589 6791 9.681062 AAAGGCTGCTCAGTTATTATTTTACTA 57.319 29.630 0.00 0.00 0.00 1.82
4596 6799 6.359804 TGATGAAAGGCTGCTCAGTTATTAT 58.640 36.000 0.00 0.00 0.00 1.28
4627 6830 3.461061 ACGCATGGATATCACTGTTCAG 58.539 45.455 4.83 0.00 0.00 3.02
4635 6862 2.159382 TCGCTCTACGCATGGATATCA 58.841 47.619 4.83 0.00 43.23 2.15
4681 6908 1.741145 CACTACGTGGGTAAATTGCCC 59.259 52.381 12.50 12.50 46.26 5.36
4719 6949 7.557719 TCATTTCTTTTTCTCTCAAGAGGTGTT 59.442 33.333 7.17 0.00 42.30 3.32
4748 6978 6.823182 TGATTCACATTACGATCCTTCAATGT 59.177 34.615 0.00 0.00 41.14 2.71
4749 6979 7.011763 AGTGATTCACATTACGATCCTTCAATG 59.988 37.037 18.57 0.00 36.74 2.82
4750 6980 7.011763 CAGTGATTCACATTACGATCCTTCAAT 59.988 37.037 18.57 0.00 36.74 2.57
4753 6983 5.277058 GCAGTGATTCACATTACGATCCTTC 60.277 44.000 18.57 0.00 36.74 3.46
4771 7141 1.227823 CGGAAACCTGTGGCAGTGA 60.228 57.895 0.00 0.00 0.00 3.41
4792 7162 3.560025 CCAGGACAATTGCCTTCTGTAGT 60.560 47.826 15.98 0.00 32.12 2.73
4796 7166 1.915141 ACCAGGACAATTGCCTTCTG 58.085 50.000 15.98 12.53 32.12 3.02
4805 7175 0.321653 GCCAGTCGAACCAGGACAAT 60.322 55.000 0.00 0.00 36.87 2.71
4844 7214 0.606604 GGCTTTGGACTGACGGTAGA 59.393 55.000 0.00 0.00 0.00 2.59
4870 7240 6.462500 GCTATGAAGGAGAGCTCATGATTTA 58.538 40.000 17.77 2.39 35.89 1.40
4874 7244 2.632028 GGCTATGAAGGAGAGCTCATGA 59.368 50.000 17.77 0.00 39.05 3.07
4875 7245 2.633967 AGGCTATGAAGGAGAGCTCATG 59.366 50.000 17.77 0.00 39.05 3.07
4876 7246 2.899256 GAGGCTATGAAGGAGAGCTCAT 59.101 50.000 17.77 2.59 39.05 2.90
4877 7247 2.315176 GAGGCTATGAAGGAGAGCTCA 58.685 52.381 17.77 0.00 39.05 4.26
4878 7248 1.618343 GGAGGCTATGAAGGAGAGCTC 59.382 57.143 5.27 5.27 39.05 4.09
4879 7249 1.062581 TGGAGGCTATGAAGGAGAGCT 60.063 52.381 0.00 0.00 39.05 4.09
4880 7250 1.418334 TGGAGGCTATGAAGGAGAGC 58.582 55.000 0.00 0.00 38.27 4.09
4881 7251 2.302445 CCATGGAGGCTATGAAGGAGAG 59.698 54.545 5.56 0.00 0.00 3.20
4882 7252 2.333069 CCATGGAGGCTATGAAGGAGA 58.667 52.381 5.56 0.00 0.00 3.71
4883 7253 1.350351 CCCATGGAGGCTATGAAGGAG 59.650 57.143 15.22 0.00 35.39 3.69
4884 7254 1.438469 CCCATGGAGGCTATGAAGGA 58.562 55.000 15.22 0.00 35.39 3.36
4885 7255 0.403271 CCCCATGGAGGCTATGAAGG 59.597 60.000 15.22 0.00 35.39 3.46
4886 7256 0.403271 CCCCCATGGAGGCTATGAAG 59.597 60.000 15.22 0.00 35.39 3.02
4887 7257 0.029163 TCCCCCATGGAGGCTATGAA 60.029 55.000 15.22 0.00 38.61 2.57
4888 7258 0.029163 TTCCCCCATGGAGGCTATGA 60.029 55.000 15.22 2.78 46.24 2.15
4889 7259 1.005215 GATTCCCCCATGGAGGCTATG 59.995 57.143 15.22 0.30 46.24 2.23
4890 7260 1.376649 GATTCCCCCATGGAGGCTAT 58.623 55.000 15.22 6.37 46.24 2.97
4891 7261 1.127567 CGATTCCCCCATGGAGGCTA 61.128 60.000 15.22 0.71 46.24 3.93
4892 7262 2.455565 CGATTCCCCCATGGAGGCT 61.456 63.158 15.22 0.00 46.24 4.58
4893 7263 2.113986 CGATTCCCCCATGGAGGC 59.886 66.667 15.22 0.00 46.24 4.70
4894 7264 2.113986 GCGATTCCCCCATGGAGG 59.886 66.667 15.22 10.46 46.24 4.30
4895 7265 1.228063 CAGCGATTCCCCCATGGAG 60.228 63.158 15.22 0.00 46.24 3.86
4896 7266 2.756042 CCAGCGATTCCCCCATGGA 61.756 63.158 15.22 0.00 43.18 3.41
4897 7267 2.203394 CCAGCGATTCCCCCATGG 60.203 66.667 4.14 4.14 0.00 3.66
4898 7268 2.908940 GCCAGCGATTCCCCCATG 60.909 66.667 0.00 0.00 0.00 3.66
4899 7269 3.419580 TGCCAGCGATTCCCCCAT 61.420 61.111 0.00 0.00 0.00 4.00
4900 7270 4.424711 GTGCCAGCGATTCCCCCA 62.425 66.667 0.00 0.00 0.00 4.96
4903 7273 4.778143 ACGGTGCCAGCGATTCCC 62.778 66.667 24.42 0.00 42.41 3.97
4904 7274 3.195698 GACGGTGCCAGCGATTCC 61.196 66.667 24.42 5.24 42.41 3.01
4905 7275 3.554692 CGACGGTGCCAGCGATTC 61.555 66.667 24.42 10.04 42.41 2.52
4919 7289 1.064458 GCTCTCTTACCTCGGCGAC 59.936 63.158 4.99 0.00 0.00 5.19
4920 7290 2.470362 CGCTCTCTTACCTCGGCGA 61.470 63.158 10.14 10.14 44.36 5.54
4921 7291 2.024871 CGCTCTCTTACCTCGGCG 59.975 66.667 0.00 0.00 36.89 6.46
4922 7292 1.664321 TTCCGCTCTCTTACCTCGGC 61.664 60.000 0.00 0.00 39.90 5.54
4923 7293 1.033574 ATTCCGCTCTCTTACCTCGG 58.966 55.000 0.00 0.00 41.30 4.63
4924 7294 1.676529 TCATTCCGCTCTCTTACCTCG 59.323 52.381 0.00 0.00 0.00 4.63
4925 7295 2.427453 TGTCATTCCGCTCTCTTACCTC 59.573 50.000 0.00 0.00 0.00 3.85
4926 7296 2.457598 TGTCATTCCGCTCTCTTACCT 58.542 47.619 0.00 0.00 0.00 3.08
4927 7297 2.961526 TGTCATTCCGCTCTCTTACC 57.038 50.000 0.00 0.00 0.00 2.85
4928 7298 3.385577 GGATGTCATTCCGCTCTCTTAC 58.614 50.000 0.00 0.00 0.00 2.34
4929 7299 3.735237 GGATGTCATTCCGCTCTCTTA 57.265 47.619 0.00 0.00 0.00 2.10
4930 7300 2.611225 GGATGTCATTCCGCTCTCTT 57.389 50.000 0.00 0.00 0.00 2.85
4960 7330 3.829044 GCTTCGCCATGCCATGCA 61.829 61.111 0.00 0.00 44.86 3.96
4961 7331 4.918129 CGCTTCGCCATGCCATGC 62.918 66.667 0.00 0.00 0.00 4.06
4962 7332 3.177272 CTCGCTTCGCCATGCCATG 62.177 63.158 0.00 0.00 0.00 3.66
4963 7333 2.898840 CTCGCTTCGCCATGCCAT 60.899 61.111 0.00 0.00 0.00 4.40
5019 7389 0.034896 TTCTTCTGGGGTTGACTCGC 59.965 55.000 0.00 0.00 0.00 5.03
5024 7394 1.349026 CTGCTCTTCTTCTGGGGTTGA 59.651 52.381 0.00 0.00 0.00 3.18
5033 7403 1.382692 GCATGCCCCTGCTCTTCTTC 61.383 60.000 6.36 0.00 39.12 2.87
5042 7412 2.259266 AAACAAAAAGCATGCCCCTG 57.741 45.000 15.66 9.50 0.00 4.45
5045 7415 4.368874 AAACAAAACAAAAAGCATGCCC 57.631 36.364 15.66 0.00 0.00 5.36
5046 7416 4.031539 GCAAAACAAAACAAAAAGCATGCC 59.968 37.500 15.66 0.00 0.00 4.40
5047 7417 4.258938 CGCAAAACAAAACAAAAAGCATGC 60.259 37.500 10.51 10.51 0.00 4.06
5048 7418 4.262510 CCGCAAAACAAAACAAAAAGCATG 59.737 37.500 0.00 0.00 0.00 4.06
5049 7419 4.410448 CCGCAAAACAAAACAAAAAGCAT 58.590 34.783 0.00 0.00 0.00 3.79
5050 7420 3.365364 CCCGCAAAACAAAACAAAAAGCA 60.365 39.130 0.00 0.00 0.00 3.91
5051 7421 3.120165 TCCCGCAAAACAAAACAAAAAGC 60.120 39.130 0.00 0.00 0.00 3.51
5052 7422 4.399112 GTCCCGCAAAACAAAACAAAAAG 58.601 39.130 0.00 0.00 0.00 2.27
5053 7423 3.188667 GGTCCCGCAAAACAAAACAAAAA 59.811 39.130 0.00 0.00 0.00 1.94
5054 7424 2.742589 GGTCCCGCAAAACAAAACAAAA 59.257 40.909 0.00 0.00 0.00 2.44
5055 7425 2.347731 GGTCCCGCAAAACAAAACAAA 58.652 42.857 0.00 0.00 0.00 2.83
5056 7426 1.736032 CGGTCCCGCAAAACAAAACAA 60.736 47.619 0.00 0.00 0.00 2.83
5057 7427 0.179134 CGGTCCCGCAAAACAAAACA 60.179 50.000 0.00 0.00 0.00 2.83
5058 7428 2.584111 CGGTCCCGCAAAACAAAAC 58.416 52.632 0.00 0.00 0.00 2.43
5081 7451 1.142531 GCTAAAAGCATGCCCCTGC 59.857 57.895 15.66 9.23 41.89 4.85
5082 7452 1.315257 ACGCTAAAAGCATGCCCCTG 61.315 55.000 15.66 2.43 42.58 4.45
5083 7453 1.000896 ACGCTAAAAGCATGCCCCT 60.001 52.632 15.66 0.63 42.58 4.79
5197 7608 2.479650 CGTCTCGGTGACTCGGTC 59.520 66.667 8.39 0.00 43.25 4.79
5198 7609 3.735029 GCGTCTCGGTGACTCGGT 61.735 66.667 8.39 0.00 43.25 4.69
5199 7610 3.432588 AGCGTCTCGGTGACTCGG 61.433 66.667 8.39 0.00 43.25 4.63
5242 7653 9.288124 CATCATATTTTGAAACGAGCATTTGTA 57.712 29.630 0.00 0.00 38.03 2.41
5249 7660 5.512788 CACCACATCATATTTTGAAACGAGC 59.487 40.000 0.00 0.00 38.03 5.03
5274 7685 8.740123 TTTTTCTTTTTGAGGGGAAATAAACC 57.260 30.769 0.00 0.00 0.00 3.27
5281 7692 9.374711 ACTACATATTTTTCTTTTTGAGGGGAA 57.625 29.630 0.00 0.00 0.00 3.97
5282 7693 8.950007 ACTACATATTTTTCTTTTTGAGGGGA 57.050 30.769 0.00 0.00 0.00 4.81
5302 7713 9.498176 GATTTCCTTGTTTCTAAACCTACTACA 57.502 33.333 3.27 0.00 38.11 2.74
5303 7714 8.654215 CGATTTCCTTGTTTCTAAACCTACTAC 58.346 37.037 3.27 0.00 38.11 2.73
5346 7757 4.167892 TGGGGAGGATATGCAAGTTTGTAT 59.832 41.667 0.00 1.26 37.30 2.29
5348 7759 2.311542 TGGGGAGGATATGCAAGTTTGT 59.688 45.455 0.00 0.00 0.00 2.83
5351 7762 1.496429 CCTGGGGAGGATATGCAAGTT 59.504 52.381 0.00 0.00 0.00 2.66
5353 7764 0.403271 CCCTGGGGAGGATATGCAAG 59.597 60.000 4.27 0.00 37.50 4.01
5354 7765 0.029163 TCCCTGGGGAGGATATGCAA 60.029 55.000 14.00 0.00 39.76 4.08
5355 7766 0.029163 TTCCCTGGGGAGGATATGCA 60.029 55.000 14.00 0.00 46.06 3.96
5356 7767 1.283321 GATTCCCTGGGGAGGATATGC 59.717 57.143 14.00 0.00 46.06 3.14
5357 7768 2.307098 GTGATTCCCTGGGGAGGATATG 59.693 54.545 14.00 0.00 46.06 1.78
5359 7770 1.585592 AGTGATTCCCTGGGGAGGATA 59.414 52.381 14.00 0.00 46.06 2.59
5360 7771 0.348370 AGTGATTCCCTGGGGAGGAT 59.652 55.000 14.00 2.21 46.06 3.24
5361 7772 0.621571 CAGTGATTCCCTGGGGAGGA 60.622 60.000 14.00 0.00 46.06 3.71
5362 7773 1.918253 CAGTGATTCCCTGGGGAGG 59.082 63.158 14.00 0.00 46.06 4.30
5363 7774 1.225704 GCAGTGATTCCCTGGGGAG 59.774 63.158 14.00 0.00 46.06 4.30
5364 7775 1.229951 AGCAGTGATTCCCTGGGGA 60.230 57.895 14.00 3.81 43.52 4.81
5365 7776 1.077212 CAGCAGTGATTCCCTGGGG 60.077 63.158 14.00 2.42 0.00 4.96
5366 7777 1.077212 CCAGCAGTGATTCCCTGGG 60.077 63.158 6.33 6.33 40.86 4.45
5367 7778 1.751927 GCCAGCAGTGATTCCCTGG 60.752 63.158 8.86 8.86 45.93 4.45
5368 7779 1.030488 CAGCCAGCAGTGATTCCCTG 61.030 60.000 0.00 0.00 0.00 4.45
5369 7780 1.302285 CAGCCAGCAGTGATTCCCT 59.698 57.895 0.00 0.00 0.00 4.20
5370 7781 1.751927 CCAGCCAGCAGTGATTCCC 60.752 63.158 0.00 0.00 0.00 3.97
5371 7782 2.413142 GCCAGCCAGCAGTGATTCC 61.413 63.158 0.00 0.00 0.00 3.01
5372 7783 0.107508 TAGCCAGCCAGCAGTGATTC 60.108 55.000 0.00 0.00 34.23 2.52
5373 7784 0.107312 CTAGCCAGCCAGCAGTGATT 60.107 55.000 0.00 0.00 34.23 2.57
5374 7785 1.270414 ACTAGCCAGCCAGCAGTGAT 61.270 55.000 0.00 0.00 34.23 3.06
5375 7786 1.892819 GACTAGCCAGCCAGCAGTGA 61.893 60.000 0.00 0.00 34.23 3.41
5376 7787 1.449246 GACTAGCCAGCCAGCAGTG 60.449 63.158 0.00 0.00 34.23 3.66
5377 7788 0.324738 TAGACTAGCCAGCCAGCAGT 60.325 55.000 0.00 0.21 34.23 4.40
5378 7789 1.000731 GATAGACTAGCCAGCCAGCAG 59.999 57.143 0.00 0.00 34.23 4.24
5379 7790 1.043816 GATAGACTAGCCAGCCAGCA 58.956 55.000 0.00 0.00 34.23 4.41
5380 7791 0.320050 GGATAGACTAGCCAGCCAGC 59.680 60.000 12.01 0.00 33.51 4.85
5381 7792 0.972883 GGGATAGACTAGCCAGCCAG 59.027 60.000 18.26 0.00 35.47 4.85
5382 7793 0.264657 TGGGATAGACTAGCCAGCCA 59.735 55.000 18.26 4.74 35.47 4.75
5383 7794 1.650528 ATGGGATAGACTAGCCAGCC 58.349 55.000 18.26 2.11 35.47 4.85
5384 7795 3.558109 GGAAATGGGATAGACTAGCCAGC 60.558 52.174 18.26 2.82 35.47 4.85
5385 7796 3.648067 TGGAAATGGGATAGACTAGCCAG 59.352 47.826 18.26 0.00 35.47 4.85
5386 7797 3.391296 GTGGAAATGGGATAGACTAGCCA 59.609 47.826 18.26 5.38 35.47 4.75
5387 7798 3.244596 GGTGGAAATGGGATAGACTAGCC 60.245 52.174 8.34 8.34 0.00 3.93
5388 7799 3.244596 GGGTGGAAATGGGATAGACTAGC 60.245 52.174 0.00 0.00 0.00 3.42
5389 7800 3.328050 GGGGTGGAAATGGGATAGACTAG 59.672 52.174 0.00 0.00 0.00 2.57
5390 7801 3.311778 TGGGGTGGAAATGGGATAGACTA 60.312 47.826 0.00 0.00 0.00 2.59
5391 7802 2.136026 GGGGTGGAAATGGGATAGACT 58.864 52.381 0.00 0.00 0.00 3.24
5392 7803 1.850345 TGGGGTGGAAATGGGATAGAC 59.150 52.381 0.00 0.00 0.00 2.59
5393 7804 2.295269 TGGGGTGGAAATGGGATAGA 57.705 50.000 0.00 0.00 0.00 1.98
5394 7805 2.513738 TCTTGGGGTGGAAATGGGATAG 59.486 50.000 0.00 0.00 0.00 2.08
5395 7806 2.579100 TCTTGGGGTGGAAATGGGATA 58.421 47.619 0.00 0.00 0.00 2.59
5396 7807 1.392407 TCTTGGGGTGGAAATGGGAT 58.608 50.000 0.00 0.00 0.00 3.85
5397 7808 1.162505 TTCTTGGGGTGGAAATGGGA 58.837 50.000 0.00 0.00 0.00 4.37
5398 7809 1.266178 GTTCTTGGGGTGGAAATGGG 58.734 55.000 0.00 0.00 0.00 4.00
5399 7810 2.008242 TGTTCTTGGGGTGGAAATGG 57.992 50.000 0.00 0.00 0.00 3.16
5400 7811 3.230134 TCTTGTTCTTGGGGTGGAAATG 58.770 45.455 0.00 0.00 0.00 2.32
5401 7812 3.611025 TCTTGTTCTTGGGGTGGAAAT 57.389 42.857 0.00 0.00 0.00 2.17
5402 7813 3.295973 CTTCTTGTTCTTGGGGTGGAAA 58.704 45.455 0.00 0.00 0.00 3.13
5403 7814 2.424234 CCTTCTTGTTCTTGGGGTGGAA 60.424 50.000 0.00 0.00 0.00 3.53
5404 7815 1.144913 CCTTCTTGTTCTTGGGGTGGA 59.855 52.381 0.00 0.00 0.00 4.02
5405 7816 1.620822 CCTTCTTGTTCTTGGGGTGG 58.379 55.000 0.00 0.00 0.00 4.61
5406 7817 0.961753 GCCTTCTTGTTCTTGGGGTG 59.038 55.000 0.00 0.00 0.00 4.61
5407 7818 0.555769 TGCCTTCTTGTTCTTGGGGT 59.444 50.000 0.00 0.00 0.00 4.95
5448 7859 0.246635 GTCTCTCGCTTTACCCTGCA 59.753 55.000 0.00 0.00 0.00 4.41
5454 7865 1.626747 GGAACCGTCTCTCGCTTTAC 58.373 55.000 0.00 0.00 38.35 2.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.