Multiple sequence alignment - TraesCS2D01G337400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G337400 chr2D 100.000 4797 0 0 2856 7652 430618739 430623535 0.000000e+00 8859.0
1 TraesCS2D01G337400 chr2D 100.000 2529 0 0 1 2529 430615884 430618412 0.000000e+00 4671.0
2 TraesCS2D01G337400 chr2B 95.536 2173 64 12 2856 5023 508952557 508954701 0.000000e+00 3445.0
3 TraesCS2D01G337400 chr2B 89.370 2173 132 44 434 2528 508950383 508952534 0.000000e+00 2641.0
4 TraesCS2D01G337400 chr2B 95.804 1001 31 5 5227 6224 508955298 508956290 0.000000e+00 1605.0
5 TraesCS2D01G337400 chr2B 97.442 782 13 5 6318 7096 508956298 508957075 0.000000e+00 1327.0
6 TraesCS2D01G337400 chr2B 84.073 383 41 9 1 364 508653422 508653803 1.220000e-92 351.0
7 TraesCS2D01G337400 chr2B 89.241 158 9 5 5071 5225 508955047 508955199 2.820000e-44 191.0
8 TraesCS2D01G337400 chr2B 93.333 105 7 0 7216 7320 508957229 508957333 1.030000e-33 156.0
9 TraesCS2D01G337400 chr2B 83.889 180 12 5 7475 7652 508957336 508957500 1.030000e-33 156.0
10 TraesCS2D01G337400 chr2B 82.955 176 19 10 6219 6390 6316408 6316576 1.720000e-31 148.0
11 TraesCS2D01G337400 chr2B 94.845 97 1 2 6221 6317 629108630 629108538 1.720000e-31 148.0
12 TraesCS2D01G337400 chr2B 89.076 119 4 7 6220 6337 629108531 629108641 1.040000e-28 139.0
13 TraesCS2D01G337400 chr2B 95.946 74 3 0 7112 7185 508957060 508957133 3.750000e-23 121.0
14 TraesCS2D01G337400 chr2B 96.552 58 2 0 6333 6390 584130220 584130163 6.320000e-16 97.1
15 TraesCS2D01G337400 chr2B 100.000 31 0 0 7181 7211 508957162 508957192 2.980000e-04 58.4
16 TraesCS2D01G337400 chr2A 96.226 2014 50 12 3019 5024 555342195 555340200 0.000000e+00 3275.0
17 TraesCS2D01G337400 chr2A 95.365 1424 57 7 1038 2457 555344075 555342657 0.000000e+00 2255.0
18 TraesCS2D01G337400 chr2A 95.110 1002 42 6 5227 6224 555339589 555338591 0.000000e+00 1572.0
19 TraesCS2D01G337400 chr2A 92.133 966 62 9 1 955 555345279 555344317 0.000000e+00 1351.0
20 TraesCS2D01G337400 chr2A 97.698 782 10 4 6318 7096 555338583 555337807 0.000000e+00 1338.0
21 TraesCS2D01G337400 chr2A 86.730 211 26 2 5253 5461 555339633 555339423 4.620000e-57 233.0
22 TraesCS2D01G337400 chr2A 97.802 91 2 0 2878 2968 555342419 555342329 2.860000e-34 158.0
23 TraesCS2D01G337400 chr2A 93.243 74 5 0 7112 7185 555337822 555337749 8.120000e-20 110.0
24 TraesCS2D01G337400 chr2A 100.000 30 0 0 2967 2996 555342225 555342196 1.000000e-03 56.5
25 TraesCS2D01G337400 chrUn 100.000 407 0 0 6437 6843 478027487 478027081 0.000000e+00 752.0
26 TraesCS2D01G337400 chrUn 88.406 69 7 1 6322 6389 303234080 303234148 1.770000e-11 82.4
27 TraesCS2D01G337400 chr1D 86.056 251 31 4 5239 5487 236320868 236320620 4.550000e-67 267.0
28 TraesCS2D01G337400 chr1B 86.250 240 29 4 5238 5476 341748227 341747991 2.740000e-64 257.0
29 TraesCS2D01G337400 chr1B 84.322 236 32 4 5227 5461 341748375 341748144 7.730000e-55 226.0
30 TraesCS2D01G337400 chr1B 87.000 200 24 2 5239 5437 341748296 341748098 2.780000e-54 224.0
31 TraesCS2D01G337400 chr1B 93.269 104 2 3 6214 6317 629828505 629828603 1.720000e-31 148.0
32 TraesCS2D01G337400 chr1A 86.250 240 30 3 5239 5477 309459766 309460003 2.740000e-64 257.0
33 TraesCS2D01G337400 chr1A 86.321 212 24 4 5227 5437 309459687 309459894 7.730000e-55 226.0
34 TraesCS2D01G337400 chr1A 93.137 102 3 2 6216 6317 189714904 189715001 6.190000e-31 147.0
35 TraesCS2D01G337400 chr5D 85.882 170 13 8 6222 6389 395728204 395728044 3.670000e-38 171.0
36 TraesCS2D01G337400 chr5D 90.164 61 6 0 5153 5213 175767716 175767656 6.370000e-11 80.5
37 TraesCS2D01G337400 chr4D 94.845 97 1 2 6221 6317 72678776 72678684 1.720000e-31 148.0
38 TraesCS2D01G337400 chr4D 88.406 69 7 1 6322 6389 499893423 499893355 1.770000e-11 82.4
39 TraesCS2D01G337400 chr4A 94.000 100 2 2 6218 6317 650040878 650040973 1.720000e-31 148.0
40 TraesCS2D01G337400 chr3B 90.179 112 4 6 6206 6317 806367816 806367712 1.040000e-28 139.0
41 TraesCS2D01G337400 chr6D 91.892 74 6 0 6318 6391 344172586 344172513 3.780000e-18 104.0
42 TraesCS2D01G337400 chr3D 78.286 175 14 11 6221 6389 76376779 76376623 2.940000e-14 91.6
43 TraesCS2D01G337400 chr5B 91.379 58 5 0 5153 5210 172626585 172626642 6.370000e-11 80.5
44 TraesCS2D01G337400 chr5A 88.060 67 8 0 5144 5210 165330280 165330346 6.370000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G337400 chr2D 430615884 430623535 7651 False 6765.000000 8859 100.000000 1 7652 2 chr2D.!!$F1 7651
1 TraesCS2D01G337400 chr2B 508950383 508957500 7117 False 1077.822222 3445 93.395667 434 7652 9 chr2B.!!$F4 7218
2 TraesCS2D01G337400 chr2A 555337749 555345279 7530 True 1149.833333 3275 94.923000 1 7185 9 chr2A.!!$R1 7184

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
320 321 0.036388 TAGAAGGTCCAAGCAAGCGG 60.036 55.0 0.00 0.00 0.00 5.52 F
947 971 0.178987 GACGGCCCAGATCTCTCCTA 60.179 60.0 0.00 0.00 0.00 2.94 F
2006 2198 1.311651 GCTTCTTGCTCCTCCAAGGC 61.312 60.0 2.49 0.00 41.89 4.35 F
2876 3117 0.105039 CCACGATGAAGCCCTCTACC 59.895 60.0 0.00 0.00 0.00 3.18 F
3452 3798 0.657840 AACACTTTGTCGAGCAGTGC 59.342 50.0 7.13 7.13 34.19 4.40 F
4121 4472 0.841961 TGCAGATTGATGGGGAGGAG 59.158 55.0 0.00 0.00 0.00 3.69 F
5388 6153 0.254178 CAGATGGGGTGGGAGTGAAG 59.746 60.0 0.00 0.00 0.00 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2300 2518 0.314302 AGAGTCAGTTGAACCGGTCG 59.686 55.000 8.04 0.0 0.00 4.79 R
2351 2569 1.608025 CGACTGCTAGTTTTCTGCCCA 60.608 52.381 0.00 0.0 0.00 5.36 R
3592 3939 0.032952 AGCCGACAGTTTAAGCACGA 59.967 50.000 0.00 0.0 0.00 4.35 R
4163 4514 3.757745 AATGAAGAACATAAACGCCGG 57.242 42.857 0.00 0.0 38.38 6.13 R
5037 5392 0.322648 TATGCATCCTCCAGCCGATG 59.677 55.000 0.19 0.0 39.13 3.84 R
5455 6220 0.395173 GTGGTGGTGGTGGTGAGTTT 60.395 55.000 0.00 0.0 0.00 2.66 R
7221 8061 0.393820 TTGCCTCGGTTAAACTCGGT 59.606 50.000 0.00 0.0 0.00 4.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 1.469079 GCAAGACCAAAAGCACAACGT 60.469 47.619 0.00 0.00 0.00 3.99
43 44 5.460646 CAAAAGCACAACGTCATCCTTTAT 58.539 37.500 0.00 0.00 0.00 1.40
59 60 3.002656 CCTTTATTGTGCTAGGACATGCG 59.997 47.826 18.47 5.48 0.00 4.73
92 93 8.856153 TCCTAATAGTTGCATTTTCACTTACA 57.144 30.769 0.00 0.00 0.00 2.41
100 101 7.172703 AGTTGCATTTTCACTTACACCTAGTAC 59.827 37.037 0.00 0.00 30.91 2.73
112 113 5.195848 ACACCTAGTACTAGAGCTTCCTT 57.804 43.478 28.07 3.90 35.21 3.36
170 171 8.966868 TGTCTTTGGAACTATTTTCTTCAAACT 58.033 29.630 0.00 0.00 0.00 2.66
191 192 4.122776 CTGAGCGTTGCTTAGATGGTTAT 58.877 43.478 4.73 0.00 43.59 1.89
227 228 7.645058 ATTTTTGGATTATCTGGTGACGATT 57.355 32.000 0.00 0.00 0.00 3.34
228 229 6.435430 TTTTGGATTATCTGGTGACGATTG 57.565 37.500 0.00 0.00 0.00 2.67
235 236 2.359478 GGTGACGATTGGCCCGTT 60.359 61.111 6.98 0.00 40.67 4.44
253 254 4.375272 CCGTTGACTATGAGATGAATGCT 58.625 43.478 0.00 0.00 0.00 3.79
259 260 5.128335 TGACTATGAGATGAATGCTGTCACT 59.872 40.000 0.00 0.00 0.00 3.41
261 262 6.047870 ACTATGAGATGAATGCTGTCACTTC 58.952 40.000 0.00 0.00 0.00 3.01
262 263 4.276058 TGAGATGAATGCTGTCACTTCA 57.724 40.909 0.00 0.00 33.75 3.02
264 265 5.981174 TGAGATGAATGCTGTCACTTCATA 58.019 37.500 0.00 0.00 39.16 2.15
319 320 1.338200 ACTAGAAGGTCCAAGCAAGCG 60.338 52.381 0.00 0.00 0.00 4.68
320 321 0.036388 TAGAAGGTCCAAGCAAGCGG 60.036 55.000 0.00 0.00 0.00 5.52
337 338 0.942410 CGGCGAGAAAACTCCGAACA 60.942 55.000 0.00 0.00 44.23 3.18
348 349 3.213249 ACTCCGAACAAGCTAGTAACG 57.787 47.619 0.00 0.00 0.00 3.18
349 350 2.094854 ACTCCGAACAAGCTAGTAACGG 60.095 50.000 11.26 11.26 40.41 4.44
379 380 1.350071 ATCCATTTTGGGTTGCAGCA 58.650 45.000 2.05 0.00 38.32 4.41
380 381 0.392336 TCCATTTTGGGTTGCAGCAC 59.608 50.000 2.05 0.00 38.32 4.40
383 384 0.249405 ATTTTGGGTTGCAGCACACG 60.249 50.000 4.41 0.00 0.00 4.49
393 394 4.767841 AGCACACGAGAGAGCGCG 62.768 66.667 0.00 0.00 43.24 6.86
410 411 3.843240 GCGCGAGTGCTACTGTGC 61.843 66.667 12.10 0.00 39.65 4.57
509 513 4.227300 TCATAAAACTGGCTACCACAGGAT 59.773 41.667 0.00 0.00 40.23 3.24
514 518 4.650972 ACTGGCTACCACAGGATTTTTA 57.349 40.909 0.00 0.00 40.23 1.52
634 653 7.748031 AATTTGCAAATATGTTCGCGAATTA 57.252 28.000 26.23 19.22 43.38 1.40
669 691 1.003355 TCTCTTCTGGGCCAAAGCG 60.003 57.895 8.04 9.57 41.24 4.68
674 696 1.231958 TTCTGGGCCAAAGCGTAACG 61.232 55.000 8.04 0.00 41.24 3.18
718 741 1.529226 CATGACGGCCCAAAACTGTA 58.471 50.000 0.00 0.00 0.00 2.74
947 971 0.178987 GACGGCCCAGATCTCTCCTA 60.179 60.000 0.00 0.00 0.00 2.94
995 1019 2.689034 CCCTTCTTCCCGCCCTCT 60.689 66.667 0.00 0.00 0.00 3.69
1615 1799 2.357881 CGCTTGCCTCAGCTGACA 60.358 61.111 13.74 7.72 40.80 3.58
1818 2006 7.129457 TGATCTATCTCCACATGCTTAGTTT 57.871 36.000 0.00 0.00 0.00 2.66
1855 2043 3.002656 GGATTGTTCGCGACATTGATCAT 59.997 43.478 9.15 0.00 38.26 2.45
1948 2139 3.640967 ACTGACATGGCTCTCTAATCTCC 59.359 47.826 0.00 0.00 0.00 3.71
1977 2168 3.072330 TGCTTCAACACTAGATTGGGACA 59.928 43.478 0.00 0.00 0.00 4.02
2006 2198 1.311651 GCTTCTTGCTCCTCCAAGGC 61.312 60.000 2.49 0.00 41.89 4.35
2024 2216 1.340114 GGCTACAAAGTTCCCTCCCAG 60.340 57.143 0.00 0.00 0.00 4.45
2082 2294 6.607735 TCATACATAACATCGACGTACAGA 57.392 37.500 0.00 0.00 0.00 3.41
2105 2317 7.067859 CAGACAATCATTTCTATTGGACCATGT 59.932 37.037 0.00 0.00 38.41 3.21
2106 2318 7.067859 AGACAATCATTTCTATTGGACCATGTG 59.932 37.037 0.00 0.00 38.41 3.21
2245 2461 4.092116 AGCCAGCCAAGGATAGTATTTC 57.908 45.455 0.00 0.00 0.00 2.17
2268 2486 2.183679 CTCCACCCTCTCAAACTAGCT 58.816 52.381 0.00 0.00 0.00 3.32
2300 2518 3.531538 TGAATCGGTTTAGATGCTGACC 58.468 45.455 0.00 0.00 0.00 4.02
2328 2546 2.115427 TCAACTGACTCTGAACCACCA 58.885 47.619 0.00 0.00 0.00 4.17
2351 2569 4.537433 GCCTGCTTCGAGCCCGAT 62.537 66.667 0.00 0.00 45.10 4.18
2411 2630 2.286833 CCAACAATAGCATACCGGTTCG 59.713 50.000 15.04 5.30 0.00 3.95
2435 2654 6.321821 ACCACTTTAGAGGGCATGTTAATA 57.678 37.500 0.00 0.00 0.00 0.98
2528 2769 2.584418 CTGGACAGATGAGGCGCG 60.584 66.667 0.00 0.00 0.00 6.86
2876 3117 0.105039 CCACGATGAAGCCCTCTACC 59.895 60.000 0.00 0.00 0.00 3.18
2902 3143 5.163581 CCTTCCTATTCAAGAGCAACAATGG 60.164 44.000 0.00 0.00 0.00 3.16
2903 3144 4.922206 TCCTATTCAAGAGCAACAATGGT 58.078 39.130 0.00 0.00 40.72 3.55
3014 3360 6.691508 AGGAACAATTGCATTTCCTAAAGAC 58.308 36.000 21.38 0.26 46.03 3.01
3042 3388 1.598962 CTGGTGCCTCCACACACAG 60.599 63.158 0.00 0.00 43.88 3.66
3072 3418 0.683973 CCCTCCTAGCTGCATACCTG 59.316 60.000 1.02 0.00 0.00 4.00
3114 3460 2.433145 CCTGATCGCACGCACACT 60.433 61.111 0.00 0.00 0.00 3.55
3147 3493 2.556114 CCACCAAAGGCTTCTGATCCTT 60.556 50.000 0.00 6.05 44.07 3.36
3317 3663 6.691388 GGTAGATTTGATACCACGAAAATTGC 59.309 38.462 0.00 0.00 42.01 3.56
3341 3687 2.164338 GTTGCGTGGGGGAATTTTCTA 58.836 47.619 0.00 0.00 0.00 2.10
3398 3744 2.750237 GGCCGAATCACCCACACC 60.750 66.667 0.00 0.00 0.00 4.16
3452 3798 0.657840 AACACTTTGTCGAGCAGTGC 59.342 50.000 7.13 7.13 34.19 4.40
3456 3802 2.738213 CTTTGTCGAGCAGTGCCCCT 62.738 60.000 12.58 0.00 0.00 4.79
3511 3857 4.519213 ACACCAAACACAGCAAAGTAGTA 58.481 39.130 0.00 0.00 0.00 1.82
3518 3864 9.691362 CCAAACACAGCAAAGTAGTATTTTTAT 57.309 29.630 0.00 0.00 0.00 1.40
3938 4289 5.505654 CCGCACAAAGAATAAAACAGAGTGT 60.506 40.000 0.00 0.00 0.00 3.55
4121 4472 0.841961 TGCAGATTGATGGGGAGGAG 59.158 55.000 0.00 0.00 0.00 3.69
4163 4514 1.131315 GAAGACCATCCTTCAAAGCGC 59.869 52.381 0.00 0.00 41.53 5.92
4182 4533 1.400494 GCCGGCGTTTATGTTCTTCAT 59.600 47.619 12.58 0.00 40.25 2.57
4533 4884 9.739276 TGGTTCAATCTGTTTATCTTAAGATGT 57.261 29.630 25.22 6.05 36.05 3.06
5024 5379 4.575645 AGTTAGGACGACGGAGATTTAGAG 59.424 45.833 0.00 0.00 0.00 2.43
5025 5380 2.299521 AGGACGACGGAGATTTAGAGG 58.700 52.381 0.00 0.00 0.00 3.69
5026 5381 1.337387 GGACGACGGAGATTTAGAGGG 59.663 57.143 0.00 0.00 0.00 4.30
5027 5382 2.295885 GACGACGGAGATTTAGAGGGA 58.704 52.381 0.00 0.00 0.00 4.20
5028 5383 2.291190 GACGACGGAGATTTAGAGGGAG 59.709 54.545 0.00 0.00 0.00 4.30
5029 5384 1.609555 CGACGGAGATTTAGAGGGAGG 59.390 57.143 0.00 0.00 0.00 4.30
5030 5385 1.964933 GACGGAGATTTAGAGGGAGGG 59.035 57.143 0.00 0.00 0.00 4.30
5031 5386 1.343069 CGGAGATTTAGAGGGAGGGG 58.657 60.000 0.00 0.00 0.00 4.79
5032 5387 1.735926 GGAGATTTAGAGGGAGGGGG 58.264 60.000 0.00 0.00 0.00 5.40
5054 5409 2.507452 CATCGGCTGGAGGATGCA 59.493 61.111 0.00 0.00 34.26 3.96
5055 5410 1.072678 CATCGGCTGGAGGATGCAT 59.927 57.895 0.00 0.00 34.26 3.96
5056 5411 0.322648 CATCGGCTGGAGGATGCATA 59.677 55.000 0.00 0.00 34.26 3.14
5057 5412 1.065636 CATCGGCTGGAGGATGCATAT 60.066 52.381 0.00 0.00 34.26 1.78
5058 5413 1.059098 TCGGCTGGAGGATGCATATT 58.941 50.000 0.00 0.00 34.26 1.28
5059 5414 1.162698 CGGCTGGAGGATGCATATTG 58.837 55.000 0.00 0.00 34.26 1.90
5060 5415 1.542492 GGCTGGAGGATGCATATTGG 58.458 55.000 0.00 0.00 34.26 3.16
5061 5416 1.542492 GCTGGAGGATGCATATTGGG 58.458 55.000 0.00 0.00 34.26 4.12
5062 5417 1.889699 GCTGGAGGATGCATATTGGGG 60.890 57.143 0.00 0.00 34.26 4.96
5063 5418 1.706866 CTGGAGGATGCATATTGGGGA 59.293 52.381 0.00 0.00 34.26 4.81
5064 5419 1.706866 TGGAGGATGCATATTGGGGAG 59.293 52.381 0.00 0.00 0.00 4.30
5065 5420 1.615384 GGAGGATGCATATTGGGGAGC 60.615 57.143 0.00 0.00 0.00 4.70
5066 5421 1.074405 GAGGATGCATATTGGGGAGCA 59.926 52.381 0.00 0.00 41.73 4.26
5067 5422 1.075050 AGGATGCATATTGGGGAGCAG 59.925 52.381 0.00 0.00 40.71 4.24
5068 5423 0.886563 GATGCATATTGGGGAGCAGC 59.113 55.000 0.00 0.00 40.71 5.25
5069 5424 0.481567 ATGCATATTGGGGAGCAGCT 59.518 50.000 0.00 0.00 40.71 4.24
5070 5425 1.139439 TGCATATTGGGGAGCAGCTA 58.861 50.000 0.00 0.00 32.48 3.32
5071 5426 1.202806 TGCATATTGGGGAGCAGCTAC 60.203 52.381 0.00 0.00 32.48 3.58
5072 5427 1.202806 GCATATTGGGGAGCAGCTACA 60.203 52.381 7.05 0.00 0.00 2.74
5073 5428 2.553904 GCATATTGGGGAGCAGCTACAT 60.554 50.000 7.05 0.00 0.00 2.29
5074 5429 3.341823 CATATTGGGGAGCAGCTACATC 58.658 50.000 7.05 0.00 0.00 3.06
5075 5430 1.216064 ATTGGGGAGCAGCTACATCA 58.784 50.000 7.05 0.99 0.00 3.07
5105 5757 4.987408 TGATAATTGGTGCATTGACTGG 57.013 40.909 0.00 0.00 0.00 4.00
5108 5760 3.389925 AATTGGTGCATTGACTGGTTG 57.610 42.857 0.00 0.00 0.00 3.77
5111 5763 1.039856 GGTGCATTGACTGGTTGGTT 58.960 50.000 0.00 0.00 0.00 3.67
5113 5765 2.472816 GTGCATTGACTGGTTGGTTTG 58.527 47.619 0.00 0.00 0.00 2.93
5114 5766 2.106566 TGCATTGACTGGTTGGTTTGT 58.893 42.857 0.00 0.00 0.00 2.83
5115 5767 2.159128 TGCATTGACTGGTTGGTTTGTG 60.159 45.455 0.00 0.00 0.00 3.33
5116 5768 2.159114 GCATTGACTGGTTGGTTTGTGT 60.159 45.455 0.00 0.00 0.00 3.72
5117 5769 3.678529 GCATTGACTGGTTGGTTTGTGTT 60.679 43.478 0.00 0.00 0.00 3.32
5118 5770 3.859411 TTGACTGGTTGGTTTGTGTTC 57.141 42.857 0.00 0.00 0.00 3.18
5119 5771 1.740585 TGACTGGTTGGTTTGTGTTCG 59.259 47.619 0.00 0.00 0.00 3.95
5120 5772 1.064952 GACTGGTTGGTTTGTGTTCGG 59.935 52.381 0.00 0.00 0.00 4.30
5121 5773 1.099689 CTGGTTGGTTTGTGTTCGGT 58.900 50.000 0.00 0.00 0.00 4.69
5149 5801 4.977741 AAAACATACCGACGTGTACTTG 57.022 40.909 0.00 0.00 0.00 3.16
5150 5802 3.648339 AACATACCGACGTGTACTTGT 57.352 42.857 0.00 0.00 0.00 3.16
5157 5809 7.485913 ACATACCGACGTGTACTTGTAAAATAG 59.514 37.037 0.00 0.00 0.00 1.73
5203 5855 1.111277 GGTCACTTGCTGGTTTGGTT 58.889 50.000 0.00 0.00 0.00 3.67
5216 5880 0.550914 TTTGGTTGAGCTGGGTGTCT 59.449 50.000 0.00 0.00 0.00 3.41
5225 5889 0.830648 GCTGGGTGTCTAGGCATGTA 59.169 55.000 0.00 0.00 0.00 2.29
5312 6076 1.511613 GAGATTCTGATGGGGTGGGA 58.488 55.000 0.00 0.00 0.00 4.37
5388 6153 0.254178 CAGATGGGGTGGGAGTGAAG 59.746 60.000 0.00 0.00 0.00 3.02
5444 6209 1.010046 AGATGAGGGAGATTGGGGTGA 59.990 52.381 0.00 0.00 0.00 4.02
5450 6215 0.698818 GGAGATTGGGGTGAAGTGGT 59.301 55.000 0.00 0.00 0.00 4.16
5451 6216 1.075536 GGAGATTGGGGTGAAGTGGTT 59.924 52.381 0.00 0.00 0.00 3.67
5455 6220 4.172807 AGATTGGGGTGAAGTGGTTAGTA 58.827 43.478 0.00 0.00 0.00 1.82
5460 6225 4.202388 TGGGGTGAAGTGGTTAGTAAACTC 60.202 45.833 0.00 0.00 35.81 3.01
5461 6226 4.202388 GGGGTGAAGTGGTTAGTAAACTCA 60.202 45.833 0.00 0.00 35.81 3.41
5462 6227 4.753610 GGGTGAAGTGGTTAGTAAACTCAC 59.246 45.833 9.31 9.31 36.80 3.51
5562 6327 3.964718 ATGCACATGCGTTGACGA 58.035 50.000 7.85 0.00 45.83 4.20
5592 6357 1.269257 GGCTTGGTGCTTTCACAGTTC 60.269 52.381 0.00 0.00 44.87 3.01
5663 6428 6.820470 TGTTTGATTGTTTTTCACGGAATC 57.180 33.333 0.00 0.00 0.00 2.52
5758 6523 1.866483 ATCACCTGGCATGCTCCCAA 61.866 55.000 18.92 0.00 30.66 4.12
5846 6611 4.377431 CGTCACAAGTAGTTTGCCAGATTC 60.377 45.833 0.00 0.00 40.59 2.52
5854 6619 3.214328 AGTTTGCCAGATTCGTGAACTT 58.786 40.909 0.00 0.00 0.00 2.66
5978 6747 5.860182 CACCTCAACTAATGCTTTGTCATTG 59.140 40.000 0.00 0.00 37.27 2.82
6001 6770 7.104043 TGATGCCAGATAAGAAAATGGAAAG 57.896 36.000 0.00 0.00 34.60 2.62
6229 6998 3.804786 GCTGAAAGGTACTACTCCCTC 57.195 52.381 0.00 0.00 38.49 4.30
6230 6999 2.431419 GCTGAAAGGTACTACTCCCTCC 59.569 54.545 0.00 0.00 38.49 4.30
6231 7000 2.688958 CTGAAAGGTACTACTCCCTCCG 59.311 54.545 0.00 0.00 38.49 4.63
6232 7001 2.042162 TGAAAGGTACTACTCCCTCCGT 59.958 50.000 0.00 0.00 38.49 4.69
6233 7002 2.915657 AAGGTACTACTCCCTCCGTT 57.084 50.000 0.00 0.00 38.49 4.44
6234 7003 2.433662 AGGTACTACTCCCTCCGTTC 57.566 55.000 0.00 0.00 36.02 3.95
6235 7004 1.064091 AGGTACTACTCCCTCCGTTCC 60.064 57.143 0.00 0.00 36.02 3.62
6236 7005 1.341383 GGTACTACTCCCTCCGTTCCA 60.341 57.143 0.00 0.00 0.00 3.53
6237 7006 2.450476 GTACTACTCCCTCCGTTCCAA 58.550 52.381 0.00 0.00 0.00 3.53
6238 7007 2.019807 ACTACTCCCTCCGTTCCAAA 57.980 50.000 0.00 0.00 0.00 3.28
6239 7008 2.332117 ACTACTCCCTCCGTTCCAAAA 58.668 47.619 0.00 0.00 0.00 2.44
6240 7009 2.910977 ACTACTCCCTCCGTTCCAAAAT 59.089 45.455 0.00 0.00 0.00 1.82
6241 7010 4.098894 ACTACTCCCTCCGTTCCAAAATA 58.901 43.478 0.00 0.00 0.00 1.40
6242 7011 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
6243 7012 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
6244 7013 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
6245 7014 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
6246 7015 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
6247 7016 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
6248 7017 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
6249 7018 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
6250 7019 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
6251 7020 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
6252 7021 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
6253 7022 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
6254 7023 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
6255 7024 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
6256 7025 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
6257 7026 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
6258 7027 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
6259 7028 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
6260 7029 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
6264 7033 8.912787 ATAGATGACTCAACTTTGTACTAACG 57.087 34.615 0.00 0.00 0.00 3.18
6265 7034 6.746120 AGATGACTCAACTTTGTACTAACGT 58.254 36.000 0.00 0.00 0.00 3.99
6266 7035 7.208080 AGATGACTCAACTTTGTACTAACGTT 58.792 34.615 5.88 5.88 0.00 3.99
6267 7036 8.355169 AGATGACTCAACTTTGTACTAACGTTA 58.645 33.333 7.94 7.94 0.00 3.18
6268 7037 7.919313 TGACTCAACTTTGTACTAACGTTAG 57.081 36.000 29.27 29.27 36.82 2.34
6269 7038 7.483307 TGACTCAACTTTGTACTAACGTTAGT 58.517 34.615 35.71 35.71 45.39 2.24
6270 7039 8.620416 TGACTCAACTTTGTACTAACGTTAGTA 58.380 33.333 33.82 33.82 43.36 1.82
6282 7051 7.920908 ACTAACGTTAGTACAAAGTTGAGTC 57.079 36.000 33.80 0.00 41.92 3.36
6283 7052 5.878261 AACGTTAGTACAAAGTTGAGTCG 57.122 39.130 0.00 0.00 0.00 4.18
6284 7053 4.925068 ACGTTAGTACAAAGTTGAGTCGT 58.075 39.130 0.00 0.00 0.00 4.34
6285 7054 6.060028 ACGTTAGTACAAAGTTGAGTCGTA 57.940 37.500 0.00 0.00 0.00 3.43
6286 7055 5.909610 ACGTTAGTACAAAGTTGAGTCGTAC 59.090 40.000 0.00 0.00 34.09 3.67
6287 7056 5.909054 CGTTAGTACAAAGTTGAGTCGTACA 59.091 40.000 0.00 0.00 35.89 2.90
6288 7057 6.414694 CGTTAGTACAAAGTTGAGTCGTACAA 59.585 38.462 0.00 0.00 35.89 2.41
6289 7058 7.044117 CGTTAGTACAAAGTTGAGTCGTACAAA 60.044 37.037 0.00 0.00 35.89 2.83
6290 7059 6.823678 AGTACAAAGTTGAGTCGTACAAAG 57.176 37.500 0.00 0.00 35.89 2.77
6291 7060 6.335777 AGTACAAAGTTGAGTCGTACAAAGT 58.664 36.000 0.00 0.00 35.89 2.66
6292 7061 6.815142 AGTACAAAGTTGAGTCGTACAAAGTT 59.185 34.615 0.00 0.00 35.89 2.66
6293 7062 5.864986 ACAAAGTTGAGTCGTACAAAGTTG 58.135 37.500 0.00 0.00 33.47 3.16
6294 7063 5.640357 ACAAAGTTGAGTCGTACAAAGTTGA 59.360 36.000 0.00 0.00 32.54 3.18
6295 7064 5.968387 AAGTTGAGTCGTACAAAGTTGAG 57.032 39.130 0.00 0.00 0.00 3.02
6296 7065 5.007385 AGTTGAGTCGTACAAAGTTGAGT 57.993 39.130 0.00 0.00 0.00 3.41
6297 7066 5.041940 AGTTGAGTCGTACAAAGTTGAGTC 58.958 41.667 0.00 0.00 0.00 3.36
6298 7067 4.642445 TGAGTCGTACAAAGTTGAGTCA 57.358 40.909 0.00 0.00 38.20 3.41
6299 7068 5.196341 TGAGTCGTACAAAGTTGAGTCAT 57.804 39.130 0.00 0.00 36.24 3.06
6300 7069 5.220381 TGAGTCGTACAAAGTTGAGTCATC 58.780 41.667 0.00 0.00 36.24 2.92
6301 7070 5.009710 TGAGTCGTACAAAGTTGAGTCATCT 59.990 40.000 0.00 0.00 36.24 2.90
6302 7071 6.206048 TGAGTCGTACAAAGTTGAGTCATCTA 59.794 38.462 4.14 0.00 36.24 1.98
6303 7072 7.094334 TGAGTCGTACAAAGTTGAGTCATCTAT 60.094 37.037 4.14 0.00 36.24 1.98
6304 7073 7.603651 AGTCGTACAAAGTTGAGTCATCTATT 58.396 34.615 4.14 0.00 0.00 1.73
6305 7074 8.088981 AGTCGTACAAAGTTGAGTCATCTATTT 58.911 33.333 4.14 0.00 0.00 1.40
6306 7075 8.709646 GTCGTACAAAGTTGAGTCATCTATTTT 58.290 33.333 4.14 0.00 0.00 1.82
6307 7076 8.708742 TCGTACAAAGTTGAGTCATCTATTTTG 58.291 33.333 4.14 8.00 40.82 2.44
6308 7077 7.957484 CGTACAAAGTTGAGTCATCTATTTTGG 59.043 37.037 14.35 0.00 40.00 3.28
6309 7078 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
6310 7079 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
6311 7080 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
6312 7081 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
6313 7082 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
6314 7083 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
6315 7084 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
6316 7085 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
6395 7164 4.286032 TGTTTACAGAGGGAGTACAGCATT 59.714 41.667 0.00 0.00 0.00 3.56
7096 7871 3.037549 TGGCCATGTGAACTTTTTCCTT 58.962 40.909 0.00 0.00 0.00 3.36
7097 7872 3.454082 TGGCCATGTGAACTTTTTCCTTT 59.546 39.130 0.00 0.00 0.00 3.11
7098 7873 4.080638 TGGCCATGTGAACTTTTTCCTTTT 60.081 37.500 0.00 0.00 0.00 2.27
7099 7874 4.881273 GGCCATGTGAACTTTTTCCTTTTT 59.119 37.500 0.00 0.00 0.00 1.94
7125 7900 8.710835 TTTTGAGGTTTATGTGAACTTTTTCC 57.289 30.769 0.00 0.00 0.00 3.13
7126 7901 7.654022 TTGAGGTTTATGTGAACTTTTTCCT 57.346 32.000 0.00 0.00 0.00 3.36
7172 7947 1.519719 GAGGACTGAGGCAGCGATT 59.480 57.895 0.00 0.00 34.37 3.34
7211 8019 2.364970 TGGAAGCCAAACCAAACAGATG 59.635 45.455 0.00 0.00 32.93 2.90
7221 8061 4.098914 ACCAAACAGATGGCTACTTGAA 57.901 40.909 0.00 0.00 44.75 2.69
7223 8063 3.191371 CCAAACAGATGGCTACTTGAACC 59.809 47.826 0.00 0.00 32.78 3.62
7243 8083 1.607251 CGAGTTTAACCGAGGCAAGGT 60.607 52.381 0.00 0.00 45.29 3.50
7281 8121 1.404035 TCGCGCATGCTAAACTAGAGA 59.596 47.619 17.13 2.37 39.65 3.10
7295 8135 8.608317 GCTAAACTAGAGAAGGCATTTTCTTAG 58.392 37.037 9.57 6.60 37.53 2.18
7297 8137 5.432645 ACTAGAGAAGGCATTTTCTTAGGC 58.567 41.667 9.57 0.00 37.53 3.93
7311 8151 2.758852 TTAGGCCCTCTGGTCGGGTT 62.759 60.000 0.00 0.00 42.85 4.11
7320 8160 0.393808 CTGGTCGGGTTTATGGGGTG 60.394 60.000 0.00 0.00 0.00 4.61
7321 8161 1.135068 TGGTCGGGTTTATGGGGTGT 61.135 55.000 0.00 0.00 0.00 4.16
7322 8162 0.678684 GGTCGGGTTTATGGGGTGTG 60.679 60.000 0.00 0.00 0.00 3.82
7323 8163 0.037160 GTCGGGTTTATGGGGTGTGT 59.963 55.000 0.00 0.00 0.00 3.72
7324 8164 0.772384 TCGGGTTTATGGGGTGTGTT 59.228 50.000 0.00 0.00 0.00 3.32
7325 8165 1.170442 CGGGTTTATGGGGTGTGTTC 58.830 55.000 0.00 0.00 0.00 3.18
7326 8166 1.271707 CGGGTTTATGGGGTGTGTTCT 60.272 52.381 0.00 0.00 0.00 3.01
7327 8167 2.443416 GGGTTTATGGGGTGTGTTCTC 58.557 52.381 0.00 0.00 0.00 2.87
7328 8168 2.224917 GGGTTTATGGGGTGTGTTCTCA 60.225 50.000 0.00 0.00 0.00 3.27
7329 8169 3.492337 GGTTTATGGGGTGTGTTCTCAA 58.508 45.455 0.00 0.00 0.00 3.02
7330 8170 4.086457 GGTTTATGGGGTGTGTTCTCAAT 58.914 43.478 0.00 0.00 0.00 2.57
7331 8171 4.526650 GGTTTATGGGGTGTGTTCTCAATT 59.473 41.667 0.00 0.00 0.00 2.32
7332 8172 5.011635 GGTTTATGGGGTGTGTTCTCAATTT 59.988 40.000 0.00 0.00 0.00 1.82
7333 8173 6.209788 GGTTTATGGGGTGTGTTCTCAATTTA 59.790 38.462 0.00 0.00 0.00 1.40
7334 8174 7.256012 GGTTTATGGGGTGTGTTCTCAATTTAA 60.256 37.037 0.00 0.00 0.00 1.52
7335 8175 5.722021 ATGGGGTGTGTTCTCAATTTAAC 57.278 39.130 0.00 0.00 0.00 2.01
7336 8176 4.798882 TGGGGTGTGTTCTCAATTTAACT 58.201 39.130 0.00 0.00 0.00 2.24
7337 8177 5.942961 TGGGGTGTGTTCTCAATTTAACTA 58.057 37.500 0.00 0.00 0.00 2.24
7338 8178 6.366340 TGGGGTGTGTTCTCAATTTAACTAA 58.634 36.000 0.00 0.00 0.00 2.24
7339 8179 6.263617 TGGGGTGTGTTCTCAATTTAACTAAC 59.736 38.462 0.00 0.00 0.00 2.34
7340 8180 6.368213 GGGTGTGTTCTCAATTTAACTAACG 58.632 40.000 0.00 0.00 0.00 3.18
7341 8181 6.203338 GGGTGTGTTCTCAATTTAACTAACGA 59.797 38.462 0.00 0.00 0.00 3.85
7342 8182 7.254863 GGGTGTGTTCTCAATTTAACTAACGAA 60.255 37.037 0.00 0.00 0.00 3.85
7343 8183 8.124199 GGTGTGTTCTCAATTTAACTAACGAAA 58.876 33.333 0.00 0.00 0.00 3.46
7344 8184 9.659830 GTGTGTTCTCAATTTAACTAACGAAAT 57.340 29.630 0.00 0.00 0.00 2.17
7359 8199 8.014322 ACTAACGAAATATGTGTTATATGCCG 57.986 34.615 0.00 0.00 0.00 5.69
7360 8200 6.854496 AACGAAATATGTGTTATATGCCGT 57.146 33.333 0.00 0.00 0.00 5.68
7361 8201 6.462073 ACGAAATATGTGTTATATGCCGTC 57.538 37.500 0.00 0.00 0.00 4.79
7362 8202 5.986741 ACGAAATATGTGTTATATGCCGTCA 59.013 36.000 0.00 0.00 0.00 4.35
7363 8203 6.480651 ACGAAATATGTGTTATATGCCGTCAA 59.519 34.615 0.00 0.00 0.00 3.18
7364 8204 7.011576 ACGAAATATGTGTTATATGCCGTCAAA 59.988 33.333 0.00 0.00 0.00 2.69
7365 8205 7.853437 CGAAATATGTGTTATATGCCGTCAAAA 59.147 33.333 0.00 0.00 0.00 2.44
7366 8206 8.850454 AAATATGTGTTATATGCCGTCAAAAC 57.150 30.769 0.00 0.00 0.00 2.43
7367 8207 7.801716 ATATGTGTTATATGCCGTCAAAACT 57.198 32.000 0.00 0.00 0.00 2.66
7368 8208 8.896320 ATATGTGTTATATGCCGTCAAAACTA 57.104 30.769 0.00 0.00 0.00 2.24
7369 8209 6.411630 TGTGTTATATGCCGTCAAAACTAC 57.588 37.500 0.00 0.00 0.00 2.73
7370 8210 6.167685 TGTGTTATATGCCGTCAAAACTACT 58.832 36.000 0.00 0.00 0.00 2.57
7371 8211 7.321908 TGTGTTATATGCCGTCAAAACTACTA 58.678 34.615 0.00 0.00 0.00 1.82
7372 8212 7.276218 TGTGTTATATGCCGTCAAAACTACTAC 59.724 37.037 0.00 0.00 0.00 2.73
7373 8213 7.276218 GTGTTATATGCCGTCAAAACTACTACA 59.724 37.037 0.00 0.00 0.00 2.74
7374 8214 7.818446 TGTTATATGCCGTCAAAACTACTACAA 59.182 33.333 0.00 0.00 0.00 2.41
7375 8215 6.903883 ATATGCCGTCAAAACTACTACAAG 57.096 37.500 0.00 0.00 0.00 3.16
7376 8216 4.062677 TGCCGTCAAAACTACTACAAGT 57.937 40.909 0.00 0.00 0.00 3.16
7377 8217 4.444536 TGCCGTCAAAACTACTACAAGTT 58.555 39.130 0.00 0.00 41.46 2.66
7416 8256 8.970859 AACATATGTTTTGTTTCCCAAATTGA 57.029 26.923 15.47 0.00 42.45 2.57
7417 8257 8.970859 ACATATGTTTTGTTTCCCAAATTGAA 57.029 26.923 1.41 0.00 42.45 2.69
7418 8258 9.054922 ACATATGTTTTGTTTCCCAAATTGAAG 57.945 29.630 1.41 0.00 42.45 3.02
7419 8259 9.270640 CATATGTTTTGTTTCCCAAATTGAAGA 57.729 29.630 0.00 0.00 42.45 2.87
7420 8260 6.976636 TGTTTTGTTTCCCAAATTGAAGAC 57.023 33.333 0.00 0.00 42.45 3.01
7421 8261 5.877564 TGTTTTGTTTCCCAAATTGAAGACC 59.122 36.000 0.00 0.00 42.45 3.85
7422 8262 5.948742 TTTGTTTCCCAAATTGAAGACCT 57.051 34.783 0.00 0.00 38.12 3.85
7423 8263 7.093289 TGTTTTGTTTCCCAAATTGAAGACCTA 60.093 33.333 0.00 0.00 42.45 3.08
7424 8264 7.425224 TTTGTTTCCCAAATTGAAGACCTAA 57.575 32.000 0.00 0.00 38.12 2.69
7425 8265 7.425224 TTGTTTCCCAAATTGAAGACCTAAA 57.575 32.000 0.00 0.00 0.00 1.85
7426 8266 7.425224 TGTTTCCCAAATTGAAGACCTAAAA 57.575 32.000 0.00 0.00 0.00 1.52
7427 8267 7.852263 TGTTTCCCAAATTGAAGACCTAAAAA 58.148 30.769 0.00 0.00 0.00 1.94
7428 8268 7.766738 TGTTTCCCAAATTGAAGACCTAAAAAC 59.233 33.333 0.00 0.00 0.00 2.43
7429 8269 6.413783 TCCCAAATTGAAGACCTAAAAACC 57.586 37.500 0.00 0.00 0.00 3.27
7430 8270 6.140377 TCCCAAATTGAAGACCTAAAAACCT 58.860 36.000 0.00 0.00 0.00 3.50
7431 8271 6.041523 TCCCAAATTGAAGACCTAAAAACCTG 59.958 38.462 0.00 0.00 0.00 4.00
7432 8272 5.696270 CCAAATTGAAGACCTAAAAACCTGC 59.304 40.000 0.00 0.00 0.00 4.85
7433 8273 4.766404 ATTGAAGACCTAAAAACCTGCG 57.234 40.909 0.00 0.00 0.00 5.18
7434 8274 3.202829 TGAAGACCTAAAAACCTGCGT 57.797 42.857 0.00 0.00 0.00 5.24
7435 8275 3.547746 TGAAGACCTAAAAACCTGCGTT 58.452 40.909 0.00 0.00 0.00 4.84
7436 8276 3.314080 TGAAGACCTAAAAACCTGCGTTG 59.686 43.478 0.00 0.00 30.72 4.10
7437 8277 3.202829 AGACCTAAAAACCTGCGTTGA 57.797 42.857 0.00 0.00 30.72 3.18
7438 8278 2.876550 AGACCTAAAAACCTGCGTTGAC 59.123 45.455 0.00 0.00 30.72 3.18
7439 8279 1.951602 ACCTAAAAACCTGCGTTGACC 59.048 47.619 0.00 0.00 30.72 4.02
7440 8280 1.268625 CCTAAAAACCTGCGTTGACCC 59.731 52.381 0.00 0.00 30.72 4.46
7441 8281 2.227194 CTAAAAACCTGCGTTGACCCT 58.773 47.619 0.00 0.00 30.72 4.34
7442 8282 2.351706 AAAAACCTGCGTTGACCCTA 57.648 45.000 0.00 0.00 30.72 3.53
7443 8283 1.601166 AAAACCTGCGTTGACCCTAC 58.399 50.000 0.00 0.00 30.72 3.18
7444 8284 0.470766 AAACCTGCGTTGACCCTACA 59.529 50.000 0.00 0.00 30.72 2.74
7445 8285 0.470766 AACCTGCGTTGACCCTACAA 59.529 50.000 0.00 0.00 0.00 2.41
7446 8286 0.470766 ACCTGCGTTGACCCTACAAA 59.529 50.000 0.00 0.00 0.00 2.83
7447 8287 0.872388 CCTGCGTTGACCCTACAAAC 59.128 55.000 0.00 0.00 0.00 2.93
7448 8288 0.872388 CTGCGTTGACCCTACAAACC 59.128 55.000 0.00 0.00 0.00 3.27
7449 8289 0.470766 TGCGTTGACCCTACAAACCT 59.529 50.000 0.00 0.00 0.00 3.50
7450 8290 1.154197 GCGTTGACCCTACAAACCTC 58.846 55.000 0.00 0.00 0.00 3.85
7451 8291 1.541670 GCGTTGACCCTACAAACCTCA 60.542 52.381 0.00 0.00 0.00 3.86
7452 8292 2.874457 GCGTTGACCCTACAAACCTCAT 60.874 50.000 0.00 0.00 0.00 2.90
7453 8293 3.408634 CGTTGACCCTACAAACCTCATT 58.591 45.455 0.00 0.00 0.00 2.57
7454 8294 4.571919 CGTTGACCCTACAAACCTCATTA 58.428 43.478 0.00 0.00 0.00 1.90
7455 8295 4.630069 CGTTGACCCTACAAACCTCATTAG 59.370 45.833 0.00 0.00 0.00 1.73
7456 8296 5.568023 CGTTGACCCTACAAACCTCATTAGA 60.568 44.000 0.00 0.00 0.00 2.10
7457 8297 5.677319 TGACCCTACAAACCTCATTAGAG 57.323 43.478 0.00 0.00 41.72 2.43
7480 8320 7.069455 AGAGGGATTAGAAAAGTCTAGCTTCTC 59.931 40.741 0.00 0.00 37.65 2.87
7491 8331 9.490379 AAAAGTCTAGCTTCTCGAAAATTCTAA 57.510 29.630 0.00 0.00 36.17 2.10
7492 8332 9.490379 AAAGTCTAGCTTCTCGAAAATTCTAAA 57.510 29.630 0.00 0.00 36.17 1.85
7499 8339 4.817517 TCTCGAAAATTCTAAACGGAGCT 58.182 39.130 0.00 0.00 0.00 4.09
7500 8340 5.235516 TCTCGAAAATTCTAAACGGAGCTT 58.764 37.500 0.00 0.00 0.00 3.74
7501 8341 5.120208 TCTCGAAAATTCTAAACGGAGCTTG 59.880 40.000 0.00 0.00 0.00 4.01
7504 8344 5.334569 CGAAAATTCTAAACGGAGCTTGGAA 60.335 40.000 0.00 0.00 37.47 3.53
7529 8371 9.522804 AATCGTAAGCAGTGTGAAAATTAAAAA 57.477 25.926 0.00 0.00 37.18 1.94
7560 8402 9.793252 ATTCGAGAGTCAAAATTTCAAATATGG 57.207 29.630 0.00 0.00 0.00 2.74
7561 8403 7.761409 TCGAGAGTCAAAATTTCAAATATGGG 58.239 34.615 0.00 0.00 0.00 4.00
7562 8404 6.974622 CGAGAGTCAAAATTTCAAATATGGGG 59.025 38.462 0.00 0.00 0.00 4.96
7563 8405 7.186570 AGAGTCAAAATTTCAAATATGGGGG 57.813 36.000 0.00 0.00 0.00 5.40
7636 8478 7.093322 ACAATTCTTCCTGTTTCATCATAGC 57.907 36.000 0.00 0.00 0.00 2.97
7637 8479 5.998454 ATTCTTCCTGTTTCATCATAGCG 57.002 39.130 0.00 0.00 0.00 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 5.692115 TGTCCTAGCACAATAAAGGATGA 57.308 39.130 0.00 0.00 40.17 2.92
43 44 0.108186 CTCCGCATGTCCTAGCACAA 60.108 55.000 0.00 0.00 0.00 3.33
59 60 3.820557 TGCAACTATTAGGAATGGCTCC 58.179 45.455 0.00 0.00 45.81 4.70
92 93 3.955551 GCAAGGAAGCTCTAGTACTAGGT 59.044 47.826 26.06 10.48 34.06 3.08
100 101 2.903798 CTTGAGGCAAGGAAGCTCTAG 58.096 52.381 0.00 0.00 37.77 2.43
112 113 3.565307 AGACATTTTTGTCCTTGAGGCA 58.435 40.909 2.64 0.00 39.50 4.75
170 171 2.472695 AACCATCTAAGCAACGCTCA 57.527 45.000 0.00 0.00 38.25 4.26
198 199 9.450807 CGTCACCAGATAATCCAAAAATAATTC 57.549 33.333 0.00 0.00 0.00 2.17
212 213 1.134220 GGGCCAATCGTCACCAGATAA 60.134 52.381 4.39 0.00 0.00 1.75
219 220 1.669760 TCAACGGGCCAATCGTCAC 60.670 57.895 4.39 0.00 40.18 3.67
227 228 1.138859 CATCTCATAGTCAACGGGCCA 59.861 52.381 4.39 0.00 0.00 5.36
228 229 1.412710 TCATCTCATAGTCAACGGGCC 59.587 52.381 0.00 0.00 0.00 5.80
235 236 5.128335 AGTGACAGCATTCATCTCATAGTCA 59.872 40.000 0.00 0.00 0.00 3.41
253 254 9.748708 CTTTCCTTTGAAATTTATGAAGTGACA 57.251 29.630 0.00 0.00 39.65 3.58
286 287 3.905678 CTAGTCGGCTCCGCTGGG 61.906 72.222 0.00 0.00 39.59 4.45
307 308 3.793144 CTCGCCGCTTGCTTGGAC 61.793 66.667 0.00 0.00 38.05 4.02
324 325 5.388164 CGTTACTAGCTTGTTCGGAGTTTTC 60.388 44.000 6.03 0.00 0.00 2.29
337 338 1.171308 TGCTCGTCCGTTACTAGCTT 58.829 50.000 11.32 0.00 44.98 3.74
348 349 4.908966 CAAAATGGATTTTTGCTCGTCC 57.091 40.909 0.00 0.00 45.52 4.79
393 394 3.843240 GCACAGTAGCACTCGCGC 61.843 66.667 0.00 0.00 45.49 6.86
395 396 1.667830 TTGGCACAGTAGCACTCGC 60.668 57.895 0.00 0.00 42.39 5.03
410 411 1.528586 CTCGCTTCAAGTGTCTGTTGG 59.471 52.381 0.00 0.00 0.00 3.77
646 668 2.205022 TTGGCCCAGAAGAGACAATG 57.795 50.000 0.00 0.00 0.00 2.82
669 691 4.602006 GTCCGTATCCTTAGTTCCGTTAC 58.398 47.826 0.00 0.00 0.00 2.50
674 696 1.680207 AGCGTCCGTATCCTTAGTTCC 59.320 52.381 0.00 0.00 0.00 3.62
718 741 2.422127 CGTGATATGGGCCTTCGTTTTT 59.578 45.455 4.53 0.00 0.00 1.94
972 996 2.586792 CGGGAAGAAGGGGAGCAG 59.413 66.667 0.00 0.00 0.00 4.24
1053 1236 1.692749 GGGGATGGTGTAGGGCTGA 60.693 63.158 0.00 0.00 0.00 4.26
1143 1326 3.443925 GAGGCGGCCAAGCTTTCC 61.444 66.667 23.09 0.00 37.29 3.13
1818 2006 0.327924 AATCCAGTTCGGCATGACCA 59.672 50.000 0.00 0.00 39.03 4.02
1855 2043 3.181471 ACAAAATGGCCGAACAATGTCAA 60.181 39.130 0.00 0.00 0.00 3.18
1948 2139 6.257411 CCAATCTAGTGTTGAAGCAGAGTATG 59.743 42.308 10.76 0.00 0.00 2.39
2006 2198 3.307762 CCTTCTGGGAGGGAACTTTGTAG 60.308 52.174 0.00 0.00 44.43 2.74
2024 2216 4.996788 AATTGCCTTGATGATGTCCTTC 57.003 40.909 0.00 0.00 0.00 3.46
2054 2266 4.917998 ACGTCGATGTTATGTATGATGCTC 59.082 41.667 3.92 0.00 0.00 4.26
2082 2294 6.406177 GCACATGGTCCAATAGAAATGATTGT 60.406 38.462 0.00 0.00 33.27 2.71
2105 2317 3.319198 GGGAAGTCACGGGGAGCA 61.319 66.667 0.00 0.00 0.00 4.26
2106 2318 4.452733 CGGGAAGTCACGGGGAGC 62.453 72.222 0.00 0.00 39.49 4.70
2245 2461 3.131400 GCTAGTTTGAGAGGGTGGAGTAG 59.869 52.174 0.00 0.00 0.00 2.57
2268 2486 2.270352 ACCGATTCAGCCTTTCAACA 57.730 45.000 0.00 0.00 0.00 3.33
2300 2518 0.314302 AGAGTCAGTTGAACCGGTCG 59.686 55.000 8.04 0.00 0.00 4.79
2328 2546 2.885861 CTCGAAGCAGGCCGTACT 59.114 61.111 0.00 0.00 0.00 2.73
2349 2567 2.680339 GACTGCTAGTTTTCTGCCCATC 59.320 50.000 0.00 0.00 0.00 3.51
2351 2569 1.608025 CGACTGCTAGTTTTCTGCCCA 60.608 52.381 0.00 0.00 0.00 5.36
2387 2605 3.275999 ACCGGTATGCTATTGTTGGTTC 58.724 45.455 4.49 0.00 0.00 3.62
2401 2619 3.091545 TCTAAAGTGGTCGAACCGGTAT 58.908 45.455 8.00 0.00 42.58 2.73
2402 2620 2.489329 CTCTAAAGTGGTCGAACCGGTA 59.511 50.000 8.00 0.00 42.58 4.02
2411 2630 2.789409 ACATGCCCTCTAAAGTGGTC 57.211 50.000 0.00 0.00 0.00 4.02
2435 2654 4.363990 CACCACTCTGCTCGCGGT 62.364 66.667 6.13 0.00 0.00 5.68
2876 3117 3.282885 GTTGCTCTTGAATAGGAAGGGG 58.717 50.000 0.00 0.00 0.00 4.79
3042 3388 2.007547 GCTAGGAGGGAACGCAAACTC 61.008 57.143 0.00 0.00 0.00 3.01
3114 3460 0.250945 TTTGGTGGCAGATAACGGCA 60.251 50.000 0.00 0.00 38.87 5.69
3147 3493 1.375908 GTGAATGTGCGGAGGCTCA 60.376 57.895 17.69 0.00 45.62 4.26
3317 3663 1.184970 AATTCCCCCACGCAACCTTG 61.185 55.000 0.00 0.00 0.00 3.61
3341 3687 3.007940 TGGTGTATGTACAAGAAGCAGCT 59.992 43.478 0.00 0.00 38.04 4.24
3398 3744 0.595588 TGGCTGTAATGTGTTTGCGG 59.404 50.000 0.00 0.00 0.00 5.69
3452 3798 5.874093 AGTGAGCAGATTTTATATGAGGGG 58.126 41.667 0.00 0.00 0.00 4.79
3456 3802 7.278135 AGCTGAAGTGAGCAGATTTTATATGA 58.722 34.615 0.00 0.00 41.83 2.15
3511 3857 9.195411 CGCAGCATGTTATCCAATTATAAAAAT 57.805 29.630 0.00 0.00 39.31 1.82
3518 3864 5.826601 TTTCGCAGCATGTTATCCAATTA 57.173 34.783 0.00 0.00 39.31 1.40
3519 3865 4.717233 TTTCGCAGCATGTTATCCAATT 57.283 36.364 0.00 0.00 39.31 2.32
3592 3939 0.032952 AGCCGACAGTTTAAGCACGA 59.967 50.000 0.00 0.00 0.00 4.35
3657 4005 6.316140 CCTTCATTTTCGTCATACCTTGATGA 59.684 38.462 0.00 0.00 46.37 2.92
3938 4289 4.821805 GGCAACTGAATAAGCCTAGCAATA 59.178 41.667 0.00 0.00 43.70 1.90
4121 4472 6.942532 TCAACTAATTTATCAGCACCATCC 57.057 37.500 0.00 0.00 0.00 3.51
4163 4514 3.757745 AATGAAGAACATAAACGCCGG 57.242 42.857 0.00 0.00 38.38 6.13
4182 4533 7.629157 TCCATTAATGAACTGGTGACATCTAA 58.371 34.615 17.23 0.00 41.51 2.10
4922 5277 2.256117 ACACAAGTGCAGTCTAACCC 57.744 50.000 0.00 0.00 0.00 4.11
5037 5392 0.322648 TATGCATCCTCCAGCCGATG 59.677 55.000 0.19 0.00 39.13 3.84
5038 5393 1.283347 ATATGCATCCTCCAGCCGAT 58.717 50.000 0.19 0.00 0.00 4.18
5039 5394 1.059098 AATATGCATCCTCCAGCCGA 58.941 50.000 0.19 0.00 0.00 5.54
5040 5395 1.162698 CAATATGCATCCTCCAGCCG 58.837 55.000 0.19 0.00 0.00 5.52
5041 5396 1.542492 CCAATATGCATCCTCCAGCC 58.458 55.000 0.19 0.00 0.00 4.85
5042 5397 1.542492 CCCAATATGCATCCTCCAGC 58.458 55.000 0.19 0.00 0.00 4.85
5043 5398 1.706866 TCCCCAATATGCATCCTCCAG 59.293 52.381 0.19 0.00 0.00 3.86
5044 5399 1.706866 CTCCCCAATATGCATCCTCCA 59.293 52.381 0.19 0.00 0.00 3.86
5045 5400 1.615384 GCTCCCCAATATGCATCCTCC 60.615 57.143 0.19 0.00 0.00 4.30
5046 5401 1.074405 TGCTCCCCAATATGCATCCTC 59.926 52.381 0.19 0.00 0.00 3.71
5047 5402 1.075050 CTGCTCCCCAATATGCATCCT 59.925 52.381 0.19 0.00 34.79 3.24
5048 5403 1.542492 CTGCTCCCCAATATGCATCC 58.458 55.000 0.19 0.00 34.79 3.51
5049 5404 0.886563 GCTGCTCCCCAATATGCATC 59.113 55.000 0.19 0.00 34.79 3.91
5050 5405 0.481567 AGCTGCTCCCCAATATGCAT 59.518 50.000 3.79 3.79 34.79 3.96
5051 5406 1.139439 TAGCTGCTCCCCAATATGCA 58.861 50.000 4.91 0.00 0.00 3.96
5052 5407 1.202806 TGTAGCTGCTCCCCAATATGC 60.203 52.381 4.91 0.00 0.00 3.14
5053 5408 2.936919 TGTAGCTGCTCCCCAATATG 57.063 50.000 4.91 0.00 0.00 1.78
5054 5409 2.981784 TGATGTAGCTGCTCCCCAATAT 59.018 45.455 4.91 0.00 0.00 1.28
5055 5410 2.369860 CTGATGTAGCTGCTCCCCAATA 59.630 50.000 4.91 0.00 0.00 1.90
5056 5411 1.142465 CTGATGTAGCTGCTCCCCAAT 59.858 52.381 4.91 0.00 0.00 3.16
5057 5412 0.543277 CTGATGTAGCTGCTCCCCAA 59.457 55.000 4.91 0.00 0.00 4.12
5058 5413 1.340399 CCTGATGTAGCTGCTCCCCA 61.340 60.000 4.91 1.88 0.00 4.96
5059 5414 1.449353 CCTGATGTAGCTGCTCCCC 59.551 63.158 4.91 0.00 0.00 4.81
5060 5415 1.050988 TCCCTGATGTAGCTGCTCCC 61.051 60.000 4.91 0.00 0.00 4.30
5061 5416 0.833287 TTCCCTGATGTAGCTGCTCC 59.167 55.000 4.91 0.00 0.00 4.70
5062 5417 2.698855 TTTCCCTGATGTAGCTGCTC 57.301 50.000 4.91 0.00 0.00 4.26
5063 5418 3.439857 TTTTTCCCTGATGTAGCTGCT 57.560 42.857 7.57 7.57 0.00 4.24
5064 5419 3.696051 TCATTTTTCCCTGATGTAGCTGC 59.304 43.478 0.00 0.00 0.00 5.25
5065 5420 7.572523 TTATCATTTTTCCCTGATGTAGCTG 57.427 36.000 0.00 0.00 34.14 4.24
5066 5421 8.636213 CAATTATCATTTTTCCCTGATGTAGCT 58.364 33.333 0.00 0.00 34.14 3.32
5067 5422 7.869429 CCAATTATCATTTTTCCCTGATGTAGC 59.131 37.037 0.00 0.00 34.14 3.58
5068 5423 8.917088 ACCAATTATCATTTTTCCCTGATGTAG 58.083 33.333 0.00 0.00 34.14 2.74
5069 5424 8.694540 CACCAATTATCATTTTTCCCTGATGTA 58.305 33.333 0.00 0.00 34.14 2.29
5070 5425 7.558604 CACCAATTATCATTTTTCCCTGATGT 58.441 34.615 0.00 0.00 34.14 3.06
5071 5426 6.480981 GCACCAATTATCATTTTTCCCTGATG 59.519 38.462 0.00 0.00 34.14 3.07
5072 5427 6.156602 TGCACCAATTATCATTTTTCCCTGAT 59.843 34.615 0.00 0.00 36.19 2.90
5073 5428 5.483231 TGCACCAATTATCATTTTTCCCTGA 59.517 36.000 0.00 0.00 0.00 3.86
5074 5429 5.732633 TGCACCAATTATCATTTTTCCCTG 58.267 37.500 0.00 0.00 0.00 4.45
5075 5430 6.564557 ATGCACCAATTATCATTTTTCCCT 57.435 33.333 0.00 0.00 0.00 4.20
5130 5782 3.648339 ACAAGTACACGTCGGTATGTT 57.352 42.857 0.00 0.00 0.00 2.71
5141 5793 9.836076 GAATGGGAAACTATTTTACAAGTACAC 57.164 33.333 0.00 0.00 42.15 2.90
5157 5809 5.841810 TCACTCATGTTTTGAATGGGAAAC 58.158 37.500 0.00 0.00 32.43 2.78
5203 5855 0.618680 ATGCCTAGACACCCAGCTCA 60.619 55.000 0.00 0.00 0.00 4.26
5216 5880 2.174639 CTCCACCCCAATTACATGCCTA 59.825 50.000 0.00 0.00 0.00 3.93
5225 5889 1.467190 TCCCCACTCCACCCCAATT 60.467 57.895 0.00 0.00 0.00 2.32
5312 6076 4.455606 CTCTGGTTTGGAAGAGTTCACTT 58.544 43.478 0.00 0.00 36.08 3.16
5388 6153 3.652581 CCCCTCTGGTTTGGAAGAC 57.347 57.895 0.00 0.00 0.00 3.01
5450 6215 3.181452 GGTGGTGGTGGTGAGTTTACTAA 60.181 47.826 0.00 0.00 0.00 2.24
5451 6216 2.369532 GGTGGTGGTGGTGAGTTTACTA 59.630 50.000 0.00 0.00 0.00 1.82
5455 6220 0.395173 GTGGTGGTGGTGGTGAGTTT 60.395 55.000 0.00 0.00 0.00 2.66
5460 6225 2.124693 GTTGGTGGTGGTGGTGGTG 61.125 63.158 0.00 0.00 0.00 4.17
5461 6226 2.277404 GTTGGTGGTGGTGGTGGT 59.723 61.111 0.00 0.00 0.00 4.16
5462 6227 1.528309 GAGTTGGTGGTGGTGGTGG 60.528 63.158 0.00 0.00 0.00 4.61
5510 6275 7.517614 TGTGCTTAGATTTTGTCAATAACCA 57.482 32.000 0.00 0.00 0.00 3.67
5562 6327 0.543749 GCACCAAGCCCTCTGATAGT 59.456 55.000 0.00 0.00 37.23 2.12
5694 6459 2.104792 GCCTAATGAGACAGGTGGCATA 59.895 50.000 0.00 0.00 38.79 3.14
5758 6523 4.917385 TGCATCAGTTAATACAGGTGGTT 58.083 39.130 0.00 0.00 0.00 3.67
5846 6611 3.187227 CCAACCAGAATCTGAAGTTCACG 59.813 47.826 12.53 0.00 32.44 4.35
5854 6619 2.092753 GCAGATCCCAACCAGAATCTGA 60.093 50.000 12.53 0.00 38.13 3.27
5978 6747 7.338800 TCTTTCCATTTTCTTATCTGGCATC 57.661 36.000 0.00 0.00 0.00 3.91
6001 6770 9.651718 CTTGATATGCGGTAGAAATAAAGTTTC 57.348 33.333 0.00 0.00 0.00 2.78
6224 6993 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
6225 6994 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
6227 6996 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
6228 6997 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
6229 6998 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
6230 6999 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
6231 7000 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
6232 7001 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
6233 7002 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
6234 7003 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
6238 7007 9.355215 CGTTAGTACAAAGTTGAGTCATCTATT 57.645 33.333 4.14 0.00 0.00 1.73
6239 7008 8.521176 ACGTTAGTACAAAGTTGAGTCATCTAT 58.479 33.333 4.14 0.00 0.00 1.98
6240 7009 7.879070 ACGTTAGTACAAAGTTGAGTCATCTA 58.121 34.615 4.14 0.00 0.00 1.98
6241 7010 6.746120 ACGTTAGTACAAAGTTGAGTCATCT 58.254 36.000 0.00 0.00 0.00 2.90
6242 7011 7.404139 AACGTTAGTACAAAGTTGAGTCATC 57.596 36.000 0.00 0.00 0.00 2.92
6243 7012 8.139989 ACTAACGTTAGTACAAAGTTGAGTCAT 58.860 33.333 33.80 8.05 41.92 3.06
6244 7013 7.483307 ACTAACGTTAGTACAAAGTTGAGTCA 58.517 34.615 33.80 0.00 41.92 3.41
6245 7014 7.920908 ACTAACGTTAGTACAAAGTTGAGTC 57.079 36.000 33.80 0.00 41.92 3.36
6257 7026 7.798516 CGACTCAACTTTGTACTAACGTTAGTA 59.201 37.037 33.82 33.82 43.36 1.82
6258 7027 6.634436 CGACTCAACTTTGTACTAACGTTAGT 59.366 38.462 35.71 35.71 45.39 2.24
6259 7028 6.634436 ACGACTCAACTTTGTACTAACGTTAG 59.366 38.462 29.27 29.27 36.82 2.34
6260 7029 6.494842 ACGACTCAACTTTGTACTAACGTTA 58.505 36.000 7.94 7.94 0.00 3.18
6261 7030 5.343249 ACGACTCAACTTTGTACTAACGTT 58.657 37.500 5.88 5.88 0.00 3.99
6262 7031 4.925068 ACGACTCAACTTTGTACTAACGT 58.075 39.130 0.00 0.00 0.00 3.99
6263 7032 5.909054 TGTACGACTCAACTTTGTACTAACG 59.091 40.000 0.00 0.00 35.58 3.18
6264 7033 7.684062 TTGTACGACTCAACTTTGTACTAAC 57.316 36.000 0.00 0.00 35.58 2.34
6265 7034 7.975616 ACTTTGTACGACTCAACTTTGTACTAA 59.024 33.333 0.00 0.00 35.58 2.24
6266 7035 7.483307 ACTTTGTACGACTCAACTTTGTACTA 58.517 34.615 0.00 0.00 35.58 1.82
6267 7036 6.335777 ACTTTGTACGACTCAACTTTGTACT 58.664 36.000 0.00 0.00 35.58 2.73
6268 7037 6.579491 ACTTTGTACGACTCAACTTTGTAC 57.421 37.500 0.00 0.00 35.25 2.90
6269 7038 6.812656 TCAACTTTGTACGACTCAACTTTGTA 59.187 34.615 0.00 0.00 0.00 2.41
6270 7039 5.640357 TCAACTTTGTACGACTCAACTTTGT 59.360 36.000 0.00 0.00 0.00 2.83
6271 7040 6.102006 TCAACTTTGTACGACTCAACTTTG 57.898 37.500 0.00 0.00 0.00 2.77
6272 7041 5.873164 ACTCAACTTTGTACGACTCAACTTT 59.127 36.000 0.00 0.00 0.00 2.66
6273 7042 5.416947 ACTCAACTTTGTACGACTCAACTT 58.583 37.500 0.00 0.00 0.00 2.66
6274 7043 5.007385 ACTCAACTTTGTACGACTCAACT 57.993 39.130 0.00 0.00 0.00 3.16
6275 7044 4.802039 TGACTCAACTTTGTACGACTCAAC 59.198 41.667 0.00 0.00 0.00 3.18
6276 7045 5.001237 TGACTCAACTTTGTACGACTCAA 57.999 39.130 0.00 0.00 0.00 3.02
6277 7046 4.642445 TGACTCAACTTTGTACGACTCA 57.358 40.909 0.00 0.00 0.00 3.41
6278 7047 5.462405 AGATGACTCAACTTTGTACGACTC 58.538 41.667 0.00 0.00 0.00 3.36
6279 7048 5.455056 AGATGACTCAACTTTGTACGACT 57.545 39.130 0.00 0.00 0.00 4.18
6280 7049 7.813852 AATAGATGACTCAACTTTGTACGAC 57.186 36.000 0.00 0.00 0.00 4.34
6281 7050 8.708742 CAAAATAGATGACTCAACTTTGTACGA 58.291 33.333 0.00 0.00 0.00 3.43
6282 7051 7.957484 CCAAAATAGATGACTCAACTTTGTACG 59.043 37.037 0.00 0.00 0.00 3.67
6283 7052 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
6284 7053 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
6285 7054 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
6286 7055 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
6287 7056 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
6288 7057 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
6289 7058 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
6290 7059 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
6291 7060 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
6292 7061 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
6293 7062 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
6294 7063 4.469945 TCCTCCGTTCCAAAATAGATGACT 59.530 41.667 0.00 0.00 0.00 3.41
6295 7064 4.766375 TCCTCCGTTCCAAAATAGATGAC 58.234 43.478 0.00 0.00 0.00 3.06
6296 7065 5.183228 GTTCCTCCGTTCCAAAATAGATGA 58.817 41.667 0.00 0.00 0.00 2.92
6297 7066 4.034048 CGTTCCTCCGTTCCAAAATAGATG 59.966 45.833 0.00 0.00 0.00 2.90
6298 7067 4.081309 TCGTTCCTCCGTTCCAAAATAGAT 60.081 41.667 0.00 0.00 0.00 1.98
6299 7068 3.258872 TCGTTCCTCCGTTCCAAAATAGA 59.741 43.478 0.00 0.00 0.00 1.98
6300 7069 3.592059 TCGTTCCTCCGTTCCAAAATAG 58.408 45.455 0.00 0.00 0.00 1.73
6301 7070 3.681593 TCGTTCCTCCGTTCCAAAATA 57.318 42.857 0.00 0.00 0.00 1.40
6302 7071 2.554370 TCGTTCCTCCGTTCCAAAAT 57.446 45.000 0.00 0.00 0.00 1.82
6303 7072 2.328819 TTCGTTCCTCCGTTCCAAAA 57.671 45.000 0.00 0.00 0.00 2.44
6304 7073 2.147958 CATTCGTTCCTCCGTTCCAAA 58.852 47.619 0.00 0.00 0.00 3.28
6305 7074 1.071071 ACATTCGTTCCTCCGTTCCAA 59.929 47.619 0.00 0.00 0.00 3.53
6306 7075 0.682852 ACATTCGTTCCTCCGTTCCA 59.317 50.000 0.00 0.00 0.00 3.53
6307 7076 2.660189 TACATTCGTTCCTCCGTTCC 57.340 50.000 0.00 0.00 0.00 3.62
6308 7077 3.611549 GTCTTACATTCGTTCCTCCGTTC 59.388 47.826 0.00 0.00 0.00 3.95
6309 7078 3.006110 TGTCTTACATTCGTTCCTCCGTT 59.994 43.478 0.00 0.00 0.00 4.44
6310 7079 2.559668 TGTCTTACATTCGTTCCTCCGT 59.440 45.455 0.00 0.00 0.00 4.69
6311 7080 3.226346 TGTCTTACATTCGTTCCTCCG 57.774 47.619 0.00 0.00 0.00 4.63
6395 7164 3.554934 AGAAACAACTTGGTCAGCATCA 58.445 40.909 0.00 0.00 0.00 3.07
6860 7632 3.308117 CCCTAGCTGGATGTTGGTACAAA 60.308 47.826 0.00 0.00 40.96 2.83
7099 7874 9.157104 GGAAAAAGTTCACATAAACCTCAAAAA 57.843 29.630 0.00 0.00 35.25 1.94
7100 7875 8.536175 AGGAAAAAGTTCACATAAACCTCAAAA 58.464 29.630 0.00 0.00 35.25 2.44
7101 7876 7.978975 CAGGAAAAAGTTCACATAAACCTCAAA 59.021 33.333 0.00 0.00 35.25 2.69
7102 7877 7.417342 CCAGGAAAAAGTTCACATAAACCTCAA 60.417 37.037 0.00 0.00 35.25 3.02
7103 7878 6.040391 CCAGGAAAAAGTTCACATAAACCTCA 59.960 38.462 0.00 0.00 35.25 3.86
7104 7879 6.447162 CCAGGAAAAAGTTCACATAAACCTC 58.553 40.000 0.00 0.00 35.25 3.85
7105 7880 5.304357 CCCAGGAAAAAGTTCACATAAACCT 59.696 40.000 0.00 0.00 35.25 3.50
7106 7881 5.303333 TCCCAGGAAAAAGTTCACATAAACC 59.697 40.000 0.00 0.00 35.25 3.27
7107 7882 6.264518 TCTCCCAGGAAAAAGTTCACATAAAC 59.735 38.462 0.00 0.00 35.25 2.01
7108 7883 6.369629 TCTCCCAGGAAAAAGTTCACATAAA 58.630 36.000 0.00 0.00 35.25 1.40
7109 7884 5.947663 TCTCCCAGGAAAAAGTTCACATAA 58.052 37.500 0.00 0.00 35.25 1.90
7110 7885 5.576563 TCTCCCAGGAAAAAGTTCACATA 57.423 39.130 0.00 0.00 35.25 2.29
7111 7886 4.453480 TCTCCCAGGAAAAAGTTCACAT 57.547 40.909 0.00 0.00 35.25 3.21
7112 7887 3.943671 TCTCCCAGGAAAAAGTTCACA 57.056 42.857 0.00 0.00 35.25 3.58
7113 7888 4.145052 ACATCTCCCAGGAAAAAGTTCAC 58.855 43.478 0.00 0.00 35.25 3.18
7114 7889 4.453480 ACATCTCCCAGGAAAAAGTTCA 57.547 40.909 0.00 0.00 35.25 3.18
7115 7890 5.301805 TCAAACATCTCCCAGGAAAAAGTTC 59.698 40.000 0.00 0.00 0.00 3.01
7116 7891 5.208121 TCAAACATCTCCCAGGAAAAAGTT 58.792 37.500 0.00 0.00 0.00 2.66
7117 7892 4.803452 TCAAACATCTCCCAGGAAAAAGT 58.197 39.130 0.00 0.00 0.00 2.66
7118 7893 5.990120 ATCAAACATCTCCCAGGAAAAAG 57.010 39.130 0.00 0.00 0.00 2.27
7119 7894 5.837979 TCAATCAAACATCTCCCAGGAAAAA 59.162 36.000 0.00 0.00 0.00 1.94
7120 7895 5.392995 TCAATCAAACATCTCCCAGGAAAA 58.607 37.500 0.00 0.00 0.00 2.29
7121 7896 4.996793 TCAATCAAACATCTCCCAGGAAA 58.003 39.130 0.00 0.00 0.00 3.13
7122 7897 4.656100 TCAATCAAACATCTCCCAGGAA 57.344 40.909 0.00 0.00 0.00 3.36
7123 7898 4.656100 TTCAATCAAACATCTCCCAGGA 57.344 40.909 0.00 0.00 0.00 3.86
7124 7899 4.768968 ACTTTCAATCAAACATCTCCCAGG 59.231 41.667 0.00 0.00 0.00 4.45
7125 7900 5.972107 ACTTTCAATCAAACATCTCCCAG 57.028 39.130 0.00 0.00 0.00 4.45
7126 7901 5.010922 CCAACTTTCAATCAAACATCTCCCA 59.989 40.000 0.00 0.00 0.00 4.37
7172 7947 0.538057 CAAGCAAGTCTGGGGCTGAA 60.538 55.000 0.00 0.00 38.04 3.02
7211 8019 3.434641 GGTTAAACTCGGTTCAAGTAGCC 59.565 47.826 0.00 0.00 0.00 3.93
7213 8021 4.549458 TCGGTTAAACTCGGTTCAAGTAG 58.451 43.478 0.00 0.00 0.00 2.57
7221 8061 0.393820 TTGCCTCGGTTAAACTCGGT 59.606 50.000 0.00 0.00 0.00 4.69
7223 8063 1.076332 CCTTGCCTCGGTTAAACTCG 58.924 55.000 0.00 0.00 0.00 4.18
7243 8083 2.880578 GCGAGGCTAGGGATAAGAGCTA 60.881 54.545 0.00 0.00 0.00 3.32
7281 8121 2.313041 AGAGGGCCTAAGAAAATGCCTT 59.687 45.455 5.73 0.00 43.50 4.35
7311 8151 7.007723 AGTTAAATTGAGAACACACCCCATAA 58.992 34.615 2.17 0.00 0.00 1.90
7333 8173 8.492748 CGGCATATAACACATATTTCGTTAGTT 58.507 33.333 0.00 0.00 0.00 2.24
7334 8174 7.654520 ACGGCATATAACACATATTTCGTTAGT 59.345 33.333 0.00 0.00 0.00 2.24
7335 8175 8.014322 ACGGCATATAACACATATTTCGTTAG 57.986 34.615 0.00 0.00 0.00 2.34
7336 8176 7.652507 TGACGGCATATAACACATATTTCGTTA 59.347 33.333 0.00 0.00 0.00 3.18
7337 8177 6.480651 TGACGGCATATAACACATATTTCGTT 59.519 34.615 0.00 0.00 0.00 3.85
7338 8178 5.986741 TGACGGCATATAACACATATTTCGT 59.013 36.000 0.00 0.00 0.00 3.85
7339 8179 6.460664 TGACGGCATATAACACATATTTCG 57.539 37.500 0.00 0.00 0.00 3.46
7340 8180 8.953990 GTTTTGACGGCATATAACACATATTTC 58.046 33.333 0.00 0.00 0.00 2.17
7341 8181 8.682710 AGTTTTGACGGCATATAACACATATTT 58.317 29.630 12.25 0.00 0.00 1.40
7342 8182 8.220755 AGTTTTGACGGCATATAACACATATT 57.779 30.769 12.25 0.00 0.00 1.28
7343 8183 7.801716 AGTTTTGACGGCATATAACACATAT 57.198 32.000 12.25 0.00 0.00 1.78
7344 8184 7.982919 AGTAGTTTTGACGGCATATAACACATA 59.017 33.333 12.25 0.00 0.00 2.29
7345 8185 6.821665 AGTAGTTTTGACGGCATATAACACAT 59.178 34.615 12.25 0.00 0.00 3.21
7346 8186 6.167685 AGTAGTTTTGACGGCATATAACACA 58.832 36.000 12.25 0.05 0.00 3.72
7347 8187 6.657836 AGTAGTTTTGACGGCATATAACAC 57.342 37.500 12.25 8.86 0.00 3.32
7348 8188 7.321908 TGTAGTAGTTTTGACGGCATATAACA 58.678 34.615 12.25 0.31 0.00 2.41
7349 8189 7.760131 TGTAGTAGTTTTGACGGCATATAAC 57.240 36.000 0.00 0.00 0.00 1.89
7350 8190 8.036575 ACTTGTAGTAGTTTTGACGGCATATAA 58.963 33.333 0.00 0.00 0.00 0.98
7351 8191 7.549839 ACTTGTAGTAGTTTTGACGGCATATA 58.450 34.615 0.00 0.00 0.00 0.86
7352 8192 6.403878 ACTTGTAGTAGTTTTGACGGCATAT 58.596 36.000 0.00 0.00 0.00 1.78
7353 8193 5.786311 ACTTGTAGTAGTTTTGACGGCATA 58.214 37.500 0.00 0.00 0.00 3.14
7354 8194 4.638304 ACTTGTAGTAGTTTTGACGGCAT 58.362 39.130 0.00 0.00 0.00 4.40
7355 8195 4.062677 ACTTGTAGTAGTTTTGACGGCA 57.937 40.909 0.00 0.00 0.00 5.69
7356 8196 5.413969 AAACTTGTAGTAGTTTTGACGGC 57.586 39.130 0.00 0.00 43.85 5.68
7401 8241 7.425224 TTTAGGTCTTCAATTTGGGAAACAA 57.575 32.000 0.00 0.00 37.28 2.83
7402 8242 7.425224 TTTTAGGTCTTCAATTTGGGAAACA 57.575 32.000 0.00 0.00 0.00 2.83
7403 8243 7.225931 GGTTTTTAGGTCTTCAATTTGGGAAAC 59.774 37.037 0.00 0.00 0.00 2.78
7404 8244 7.126573 AGGTTTTTAGGTCTTCAATTTGGGAAA 59.873 33.333 0.00 0.00 0.00 3.13
7405 8245 6.613679 AGGTTTTTAGGTCTTCAATTTGGGAA 59.386 34.615 0.00 0.00 0.00 3.97
7406 8246 6.041523 CAGGTTTTTAGGTCTTCAATTTGGGA 59.958 38.462 0.00 0.00 0.00 4.37
7407 8247 6.223120 CAGGTTTTTAGGTCTTCAATTTGGG 58.777 40.000 0.00 0.00 0.00 4.12
7408 8248 5.696270 GCAGGTTTTTAGGTCTTCAATTTGG 59.304 40.000 0.00 0.00 0.00 3.28
7409 8249 5.402270 CGCAGGTTTTTAGGTCTTCAATTTG 59.598 40.000 0.00 0.00 0.00 2.32
7410 8250 5.068591 ACGCAGGTTTTTAGGTCTTCAATTT 59.931 36.000 0.00 0.00 0.00 1.82
7411 8251 4.583073 ACGCAGGTTTTTAGGTCTTCAATT 59.417 37.500 0.00 0.00 0.00 2.32
7412 8252 4.142038 ACGCAGGTTTTTAGGTCTTCAAT 58.858 39.130 0.00 0.00 0.00 2.57
7413 8253 3.547746 ACGCAGGTTTTTAGGTCTTCAA 58.452 40.909 0.00 0.00 0.00 2.69
7414 8254 3.202829 ACGCAGGTTTTTAGGTCTTCA 57.797 42.857 0.00 0.00 0.00 3.02
7415 8255 3.562557 TCAACGCAGGTTTTTAGGTCTTC 59.437 43.478 0.00 0.00 32.98 2.87
7416 8256 3.314357 GTCAACGCAGGTTTTTAGGTCTT 59.686 43.478 0.00 0.00 32.98 3.01
7417 8257 2.876550 GTCAACGCAGGTTTTTAGGTCT 59.123 45.455 0.00 0.00 32.98 3.85
7418 8258 2.031420 GGTCAACGCAGGTTTTTAGGTC 60.031 50.000 0.00 0.00 32.98 3.85
7419 8259 1.951602 GGTCAACGCAGGTTTTTAGGT 59.048 47.619 0.00 0.00 32.98 3.08
7420 8260 1.268625 GGGTCAACGCAGGTTTTTAGG 59.731 52.381 0.00 0.00 32.98 2.69
7421 8261 2.227194 AGGGTCAACGCAGGTTTTTAG 58.773 47.619 0.00 0.00 32.98 1.85
7422 8262 2.351706 AGGGTCAACGCAGGTTTTTA 57.648 45.000 0.00 0.00 32.98 1.52
7423 8263 1.951602 GTAGGGTCAACGCAGGTTTTT 59.048 47.619 0.00 0.00 32.98 1.94
7424 8264 1.134037 TGTAGGGTCAACGCAGGTTTT 60.134 47.619 0.00 0.00 32.98 2.43
7425 8265 0.470766 TGTAGGGTCAACGCAGGTTT 59.529 50.000 0.00 0.00 32.98 3.27
7426 8266 0.470766 TTGTAGGGTCAACGCAGGTT 59.529 50.000 0.00 0.00 36.63 3.50
7427 8267 0.470766 TTTGTAGGGTCAACGCAGGT 59.529 50.000 0.00 0.00 0.00 4.00
7428 8268 0.872388 GTTTGTAGGGTCAACGCAGG 59.128 55.000 0.00 0.00 0.00 4.85
7429 8269 0.872388 GGTTTGTAGGGTCAACGCAG 59.128 55.000 0.00 0.00 0.00 5.18
7430 8270 0.470766 AGGTTTGTAGGGTCAACGCA 59.529 50.000 0.00 0.00 0.00 5.24
7431 8271 1.154197 GAGGTTTGTAGGGTCAACGC 58.846 55.000 0.00 0.00 0.00 4.84
7432 8272 2.536761 TGAGGTTTGTAGGGTCAACG 57.463 50.000 0.00 0.00 0.00 4.10
7433 8273 5.801380 TCTAATGAGGTTTGTAGGGTCAAC 58.199 41.667 0.00 0.00 0.00 3.18
7434 8274 6.049955 CTCTAATGAGGTTTGTAGGGTCAA 57.950 41.667 0.00 0.00 36.70 3.18
7435 8275 5.677319 CTCTAATGAGGTTTGTAGGGTCA 57.323 43.478 0.00 0.00 36.70 4.02
7447 8287 9.148879 TAGACTTTTCTAATCCCTCTAATGAGG 57.851 37.037 5.18 5.18 43.75 3.86
7449 8289 8.643324 GCTAGACTTTTCTAATCCCTCTAATGA 58.357 37.037 0.00 0.00 33.73 2.57
7450 8290 8.646900 AGCTAGACTTTTCTAATCCCTCTAATG 58.353 37.037 0.00 0.00 33.73 1.90
7451 8291 8.791298 AGCTAGACTTTTCTAATCCCTCTAAT 57.209 34.615 0.00 0.00 33.73 1.73
7452 8292 8.611051 AAGCTAGACTTTTCTAATCCCTCTAA 57.389 34.615 0.00 0.00 33.71 2.10
7453 8293 8.062536 AGAAGCTAGACTTTTCTAATCCCTCTA 58.937 37.037 0.00 0.00 39.29 2.43
7454 8294 6.900743 AGAAGCTAGACTTTTCTAATCCCTCT 59.099 38.462 0.00 0.00 39.29 3.69
7455 8295 7.119709 AGAAGCTAGACTTTTCTAATCCCTC 57.880 40.000 0.00 0.00 39.29 4.30
7456 8296 6.183360 CGAGAAGCTAGACTTTTCTAATCCCT 60.183 42.308 0.00 0.00 39.29 4.20
7457 8297 5.980715 CGAGAAGCTAGACTTTTCTAATCCC 59.019 44.000 0.00 0.00 39.29 3.85
7458 8298 6.797454 TCGAGAAGCTAGACTTTTCTAATCC 58.203 40.000 0.00 0.00 39.29 3.01
7459 8299 8.690680 TTTCGAGAAGCTAGACTTTTCTAATC 57.309 34.615 0.00 0.00 39.29 1.75
7460 8300 9.660180 ATTTTCGAGAAGCTAGACTTTTCTAAT 57.340 29.630 0.00 0.52 39.29 1.73
7461 8301 9.490379 AATTTTCGAGAAGCTAGACTTTTCTAA 57.510 29.630 0.00 0.00 39.29 2.10
7462 8302 9.141400 GAATTTTCGAGAAGCTAGACTTTTCTA 57.859 33.333 0.00 0.00 39.29 2.10
7463 8303 7.875554 AGAATTTTCGAGAAGCTAGACTTTTCT 59.124 33.333 0.00 0.00 39.29 2.52
7464 8304 8.024146 AGAATTTTCGAGAAGCTAGACTTTTC 57.976 34.615 0.00 0.93 39.29 2.29
7465 8305 7.971183 AGAATTTTCGAGAAGCTAGACTTTT 57.029 32.000 0.00 0.00 39.29 2.27
7466 8306 9.490379 TTTAGAATTTTCGAGAAGCTAGACTTT 57.510 29.630 0.00 0.00 39.29 2.66
7467 8307 8.927721 GTTTAGAATTTTCGAGAAGCTAGACTT 58.072 33.333 0.00 0.00 42.98 3.01
7468 8308 7.273815 CGTTTAGAATTTTCGAGAAGCTAGACT 59.726 37.037 14.28 0.00 0.00 3.24
7469 8309 7.384886 CGTTTAGAATTTTCGAGAAGCTAGAC 58.615 38.462 0.00 9.80 0.00 2.59
7470 8310 6.530534 CCGTTTAGAATTTTCGAGAAGCTAGA 59.469 38.462 0.00 0.00 0.00 2.43
7471 8311 6.530534 TCCGTTTAGAATTTTCGAGAAGCTAG 59.469 38.462 0.00 0.00 0.00 3.42
7472 8312 6.392354 TCCGTTTAGAATTTTCGAGAAGCTA 58.608 36.000 0.00 0.00 0.00 3.32
7473 8313 5.235516 TCCGTTTAGAATTTTCGAGAAGCT 58.764 37.500 0.00 0.00 0.00 3.74
7480 8320 4.153475 TCCAAGCTCCGTTTAGAATTTTCG 59.847 41.667 0.00 0.00 0.00 3.46
7491 8331 2.618053 CTTACGATTCCAAGCTCCGTT 58.382 47.619 0.00 0.00 35.05 4.44
7492 8332 1.739371 GCTTACGATTCCAAGCTCCGT 60.739 52.381 9.36 0.00 43.07 4.69
7499 8339 3.394674 TCACACTGCTTACGATTCCAA 57.605 42.857 0.00 0.00 0.00 3.53
7500 8340 3.394674 TTCACACTGCTTACGATTCCA 57.605 42.857 0.00 0.00 0.00 3.53
7501 8341 4.742438 TTTTCACACTGCTTACGATTCC 57.258 40.909 0.00 0.00 0.00 3.01
7504 8344 9.691362 ATTTTTAATTTTCACACTGCTTACGAT 57.309 25.926 0.00 0.00 0.00 3.73
7537 8379 6.974622 CCCCATATTTGAAATTTTGACTCTCG 59.025 38.462 0.00 0.00 0.00 4.04
7561 8403 1.990160 TTATCCATGTCGGCCACCCC 61.990 60.000 2.24 0.00 33.14 4.95
7562 8404 0.110486 ATTATCCATGTCGGCCACCC 59.890 55.000 2.24 0.00 33.14 4.61
7563 8405 1.238439 CATTATCCATGTCGGCCACC 58.762 55.000 2.24 0.00 33.14 4.61
7564 8406 0.593128 GCATTATCCATGTCGGCCAC 59.407 55.000 2.24 0.25 34.98 5.01
7565 8407 0.537143 GGCATTATCCATGTCGGCCA 60.537 55.000 2.24 0.00 39.66 5.36
7607 8449 3.703556 TGAAACAGGAAGAATTGTTGCCA 59.296 39.130 3.10 0.00 37.57 4.92
7609 8451 5.531634 TGATGAAACAGGAAGAATTGTTGC 58.468 37.500 0.00 0.00 37.57 4.17
7610 8452 7.487189 GCTATGATGAAACAGGAAGAATTGTTG 59.513 37.037 0.00 0.00 37.57 3.33
7612 8454 6.183360 CGCTATGATGAAACAGGAAGAATTGT 60.183 38.462 0.00 0.00 0.00 2.71
7613 8455 6.037500 TCGCTATGATGAAACAGGAAGAATTG 59.962 38.462 0.00 0.00 0.00 2.32
7615 8457 5.674525 TCGCTATGATGAAACAGGAAGAAT 58.325 37.500 0.00 0.00 0.00 2.40
7616 8458 5.084818 TCGCTATGATGAAACAGGAAGAA 57.915 39.130 0.00 0.00 0.00 2.52
7617 8459 4.736126 TCGCTATGATGAAACAGGAAGA 57.264 40.909 0.00 0.00 0.00 2.87
7618 8460 4.260538 GCTTCGCTATGATGAAACAGGAAG 60.261 45.833 0.00 0.00 33.39 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.