Multiple sequence alignment - TraesCS2D01G335200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G335200 chr2D 100.000 5068 0 0 1 5068 428551770 428556837 0.000000e+00 9359
1 TraesCS2D01G335200 chr2A 96.463 2403 71 8 723 3112 559121807 559119406 0.000000e+00 3954
2 TraesCS2D01G335200 chr2A 92.568 444 32 1 3713 4156 559118979 559118537 1.990000e-178 636
3 TraesCS2D01G335200 chr2A 94.005 367 13 4 3271 3636 559119407 559119049 9.590000e-152 547
4 TraesCS2D01G335200 chr2A 87.500 424 41 6 1 423 559122420 559122008 3.550000e-131 479
5 TraesCS2D01G335200 chr2A 95.062 162 8 0 3111 3272 758586738 758586577 6.510000e-64 255
6 TraesCS2D01G335200 chr2A 91.111 180 15 1 4470 4648 559118161 559117982 5.070000e-60 243
7 TraesCS2D01G335200 chr2A 88.623 167 15 3 425 590 559121979 559121816 3.090000e-47 200
8 TraesCS2D01G335200 chr2A 94.318 88 5 0 4365 4452 632952993 632952906 8.850000e-28 135
9 TraesCS2D01G335200 chr2A 94.253 87 5 0 4364 4450 699439208 699439294 3.180000e-27 134
10 TraesCS2D01G335200 chr2A 94.253 87 5 0 4365 4451 703709010 703709096 3.180000e-27 134
11 TraesCS2D01G335200 chr2B 97.669 1330 25 6 720 2045 505491268 505492595 0.000000e+00 2279
12 TraesCS2D01G335200 chr2B 89.295 1588 90 33 3291 4856 505493799 505495328 0.000000e+00 1917
13 TraesCS2D01G335200 chr2B 96.405 1057 30 6 2044 3098 505492753 505493803 0.000000e+00 1735
14 TraesCS2D01G335200 chr2B 92.941 170 10 2 3108 3277 109974312 109974479 3.920000e-61 246
15 TraesCS2D01G335200 chr2B 93.413 167 10 1 3106 3272 144406905 144406740 3.920000e-61 246
16 TraesCS2D01G335200 chr2B 88.670 203 19 3 123 322 505490948 505490747 1.410000e-60 244
17 TraesCS2D01G335200 chr2B 90.476 168 16 0 420 587 505491092 505491259 6.600000e-54 222
18 TraesCS2D01G335200 chr2B 93.893 131 8 0 591 721 503431280 503431410 1.110000e-46 198
19 TraesCS2D01G335200 chr2B 92.647 136 8 1 588 721 13510525 13510390 1.440000e-45 195
20 TraesCS2D01G335200 chr2B 93.182 88 6 0 4364 4451 354879124 354879211 4.120000e-26 130
21 TraesCS2D01G335200 chr2B 93.182 88 6 0 4365 4452 550399687 550399774 4.120000e-26 130
22 TraesCS2D01G335200 chr7B 95.092 163 8 0 3111 3273 102234478 102234316 1.810000e-64 257
23 TraesCS2D01G335200 chr4B 94.545 165 9 0 3111 3275 406389296 406389460 6.510000e-64 255
24 TraesCS2D01G335200 chr4B 93.413 167 10 1 3106 3272 549841751 549841916 3.920000e-61 246
25 TraesCS2D01G335200 chr7D 93.976 166 10 0 3111 3276 397555077 397554912 8.420000e-63 252
26 TraesCS2D01G335200 chr7A 93.976 166 10 0 3108 3273 494786826 494786991 8.420000e-63 252
27 TraesCS2D01G335200 chr4D 94.444 162 9 0 3111 3272 326382448 326382609 3.030000e-62 250
28 TraesCS2D01G335200 chr1B 94.118 136 8 0 595 730 390878973 390879108 1.850000e-49 207
29 TraesCS2D01G335200 chr5D 94.697 132 7 0 590 721 221011452 221011583 6.650000e-49 206
30 TraesCS2D01G335200 chr5D 92.701 137 8 2 590 725 76220047 76219912 4.000000e-46 196
31 TraesCS2D01G335200 chr5D 93.407 91 4 2 4364 4453 310705265 310705354 3.180000e-27 134
32 TraesCS2D01G335200 chr5B 94.531 128 7 0 595 722 609604320 609604447 1.110000e-46 198
33 TraesCS2D01G335200 chr6B 91.608 143 11 1 588 730 644808891 644809032 4.000000e-46 196
34 TraesCS2D01G335200 chr3A 94.488 127 7 0 595 721 111763154 111763028 4.000000e-46 196
35 TraesCS2D01G335200 chr4A 92.593 135 10 0 589 723 16485465 16485599 1.440000e-45 195
36 TraesCS2D01G335200 chr6D 91.667 96 8 0 4364 4459 465044508 465044413 3.180000e-27 134
37 TraesCS2D01G335200 chr1A 93.182 88 6 0 4365 4452 527083931 527084018 4.120000e-26 130


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G335200 chr2D 428551770 428556837 5067 False 9359.000000 9359 100.000000 1 5068 1 chr2D.!!$F1 5067
1 TraesCS2D01G335200 chr2A 559117982 559122420 4438 True 1009.833333 3954 91.711667 1 4648 6 chr2A.!!$R3 4647
2 TraesCS2D01G335200 chr2B 505491092 505495328 4236 False 1538.250000 2279 93.461250 420 4856 4 chr2B.!!$F5 4436

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
611 642 0.038744 ACTACTCCCTCCGTCCGAAA 59.961 55.000 0.0 0.0 0.00 3.46 F
726 757 0.388294 GGACGGAGGGAGTATTTCGG 59.612 60.000 0.0 0.0 0.00 4.30 F
1781 1826 0.605319 CGTTTGCCTTCTGCTGGGTA 60.605 55.000 0.0 0.0 42.00 3.69 F
1879 1925 0.321564 TGGTGGCAATTCTCAGGACG 60.322 55.000 0.0 0.0 0.00 4.79 F
2040 2086 1.073897 GATGATGCCCCTAGTGCCC 59.926 63.158 0.0 0.0 0.00 5.36 F
3706 3914 0.174845 GGTACAGTGCCTGCATCGTA 59.825 55.000 0.0 0.0 34.37 3.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1860 1905 0.321564 CGTCCTGAGAATTGCCACCA 60.322 55.000 0.0 0.0 0.00 4.17 R
1879 1925 1.669999 ATCAAAGATTGCAGCCGCCC 61.670 55.000 0.0 0.0 37.32 6.13 R
2730 2937 2.421529 CCTGATAACCTTGGTAGGGTGC 60.422 54.545 0.0 0.0 43.07 5.01 R
3646 3854 2.588464 TCCTTAATCCACCCGCAAAA 57.412 45.000 0.0 0.0 0.00 2.44 R
3894 4130 1.133009 AGACCTGACCTTGTCTCCTGT 60.133 52.381 0.0 0.0 37.24 4.00 R
4623 5003 0.109597 GGCACGCTTCTCCAACATTG 60.110 55.000 0.0 0.0 0.00 2.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.879892 GACAAGCCTTCACTTCTTCAACT 59.120 43.478 0.00 0.00 0.00 3.16
30 31 3.871594 CCTTCACTTCTTCAACTGACGTT 59.128 43.478 0.00 0.00 0.00 3.99
33 34 6.292381 CCTTCACTTCTTCAACTGACGTTAAG 60.292 42.308 0.00 0.00 0.00 1.85
37 38 6.255887 CACTTCTTCAACTGACGTTAAGTTCT 59.744 38.462 13.01 0.00 35.70 3.01
51 52 0.898789 AGTTCTCGTCGACCATGGGT 60.899 55.000 18.09 0.99 39.44 4.51
54 55 0.611062 TCTCGTCGACCATGGGTTCT 60.611 55.000 18.09 0.00 35.25 3.01
55 56 0.179134 CTCGTCGACCATGGGTTCTC 60.179 60.000 18.09 3.08 35.25 2.87
68 69 0.318784 GGTTCTCGGTGGCGCTATAG 60.319 60.000 7.64 0.42 0.00 1.31
102 103 7.914427 TTGAGGGCAAGTAGAATCTTATAGA 57.086 36.000 0.00 0.00 0.00 1.98
106 107 7.076446 AGGGCAAGTAGAATCTTATAGAGGAA 58.924 38.462 0.00 0.00 0.00 3.36
116 117 8.869109 AGAATCTTATAGAGGAAGGATTGTCAG 58.131 37.037 0.00 0.00 0.00 3.51
119 120 0.539051 AGAGGAAGGATTGTCAGCGG 59.461 55.000 0.00 0.00 0.00 5.52
121 122 1.078143 GGAAGGATTGTCAGCGGCT 60.078 57.895 0.00 0.00 0.00 5.52
128 129 0.107654 ATTGTCAGCGGCTCTTACCC 60.108 55.000 0.00 0.00 0.00 3.69
149 150 1.995066 ACTCGGTGGGCCATCATCA 60.995 57.895 18.62 0.00 34.09 3.07
167 168 4.344865 TCGCAAGAGGCCCAACCC 62.345 66.667 0.00 0.00 45.01 4.11
197 198 7.346175 TGGTAGTAGGATCAGGCACTATAAAAA 59.654 37.037 0.00 0.00 36.02 1.94
200 201 7.227156 AGTAGGATCAGGCACTATAAAAATGG 58.773 38.462 0.00 0.00 36.02 3.16
215 216 1.668826 AATGGCTAGGAAGGACCACA 58.331 50.000 0.00 0.00 42.04 4.17
232 234 1.266718 CACAGAATGGGTGTTTGGACG 59.733 52.381 0.00 0.00 43.62 4.79
275 277 0.946221 CAAGGCGTGCGTCTTCTCTT 60.946 55.000 8.56 0.00 38.07 2.85
278 280 1.347817 GGCGTGCGTCTTCTCTTCTG 61.348 60.000 0.00 0.00 0.00 3.02
280 282 1.772182 CGTGCGTCTTCTCTTCTGTT 58.228 50.000 0.00 0.00 0.00 3.16
282 284 2.062519 GTGCGTCTTCTCTTCTGTTCC 58.937 52.381 0.00 0.00 0.00 3.62
283 285 1.964223 TGCGTCTTCTCTTCTGTTCCT 59.036 47.619 0.00 0.00 0.00 3.36
284 286 2.288457 TGCGTCTTCTCTTCTGTTCCTG 60.288 50.000 0.00 0.00 0.00 3.86
285 287 2.288518 GCGTCTTCTCTTCTGTTCCTGT 60.289 50.000 0.00 0.00 0.00 4.00
286 288 3.057456 GCGTCTTCTCTTCTGTTCCTGTA 60.057 47.826 0.00 0.00 0.00 2.74
287 289 4.558898 GCGTCTTCTCTTCTGTTCCTGTAA 60.559 45.833 0.00 0.00 0.00 2.41
288 290 4.918583 CGTCTTCTCTTCTGTTCCTGTAAC 59.081 45.833 0.00 0.00 38.67 2.50
289 291 5.278561 CGTCTTCTCTTCTGTTCCTGTAACT 60.279 44.000 0.00 0.00 38.99 2.24
290 292 5.923684 GTCTTCTCTTCTGTTCCTGTAACTG 59.076 44.000 0.00 0.00 38.99 3.16
295 297 1.961394 TCTGTTCCTGTAACTGCTCGT 59.039 47.619 0.00 0.00 38.99 4.18
296 298 2.030185 TCTGTTCCTGTAACTGCTCGTC 60.030 50.000 0.00 0.00 38.99 4.20
316 318 2.158158 TCTTCTTCCCTTGTCTCCTCCA 60.158 50.000 0.00 0.00 0.00 3.86
324 326 2.836981 CCTTGTCTCCTCCATGAACTCT 59.163 50.000 0.00 0.00 0.00 3.24
329 331 4.464244 TGTCTCCTCCATGAACTCTGTTAG 59.536 45.833 0.00 0.00 0.00 2.34
338 340 6.609212 TCCATGAACTCTGTTAGATAGCTTCT 59.391 38.462 0.00 0.00 38.57 2.85
339 341 6.700960 CCATGAACTCTGTTAGATAGCTTCTG 59.299 42.308 0.00 0.00 35.79 3.02
355 357 5.869579 AGCTTCTGATTCCTTCACAAGTAA 58.130 37.500 0.00 0.00 34.03 2.24
356 358 6.479884 AGCTTCTGATTCCTTCACAAGTAAT 58.520 36.000 0.00 0.00 34.03 1.89
423 452 4.079253 GTTGTTAACATCCAGACCCATGT 58.921 43.478 9.56 0.00 34.58 3.21
435 464 2.180276 GACCCATGTGTCTGGTAGAGT 58.820 52.381 0.53 0.00 34.23 3.24
438 467 2.567169 CCCATGTGTCTGGTAGAGTTCA 59.433 50.000 0.00 0.00 34.23 3.18
445 474 0.974383 CTGGTAGAGTTCAACCCGGT 59.026 55.000 0.00 0.00 34.69 5.28
483 512 2.422597 CCGGCTTGAGTTGTGTTCATA 58.577 47.619 0.00 0.00 0.00 2.15
484 513 3.009723 CCGGCTTGAGTTGTGTTCATAT 58.990 45.455 0.00 0.00 0.00 1.78
568 599 3.709587 TCTCCTCTAAAGATTGGACGGT 58.290 45.455 0.00 0.00 0.00 4.83
578 609 0.837272 ATTGGACGGTTCGGGATCAT 59.163 50.000 0.00 0.00 0.00 2.45
591 622 5.932619 TCGGGATCATGTTAATCCGATAT 57.067 39.130 11.83 0.00 43.13 1.63
592 623 7.262772 GTTCGGGATCATGTTAATCCGATATA 58.737 38.462 14.86 3.44 43.13 0.86
593 624 6.802608 TCGGGATCATGTTAATCCGATATAC 58.197 40.000 11.83 0.00 43.13 1.47
595 626 7.776500 TCGGGATCATGTTAATCCGATATACTA 59.224 37.037 11.83 0.00 43.13 1.82
596 627 7.861372 CGGGATCATGTTAATCCGATATACTAC 59.139 40.741 5.97 0.00 43.13 2.73
597 628 8.915036 GGGATCATGTTAATCCGATATACTACT 58.085 37.037 5.97 0.00 43.13 2.57
598 629 9.953697 GGATCATGTTAATCCGATATACTACTC 57.046 37.037 0.00 0.00 33.78 2.59
599 630 9.953697 GATCATGTTAATCCGATATACTACTCC 57.046 37.037 0.00 0.00 0.00 3.85
600 631 8.289939 TCATGTTAATCCGATATACTACTCCC 57.710 38.462 0.00 0.00 0.00 4.30
601 632 8.114102 TCATGTTAATCCGATATACTACTCCCT 58.886 37.037 0.00 0.00 0.00 4.20
602 633 7.934855 TGTTAATCCGATATACTACTCCCTC 57.065 40.000 0.00 0.00 0.00 4.30
603 634 6.888632 TGTTAATCCGATATACTACTCCCTCC 59.111 42.308 0.00 0.00 0.00 4.30
604 635 3.623906 TCCGATATACTACTCCCTCCG 57.376 52.381 0.00 0.00 0.00 4.63
605 636 2.909006 TCCGATATACTACTCCCTCCGT 59.091 50.000 0.00 0.00 0.00 4.69
606 637 3.055530 TCCGATATACTACTCCCTCCGTC 60.056 52.174 0.00 0.00 0.00 4.79
607 638 3.269178 CGATATACTACTCCCTCCGTCC 58.731 54.545 0.00 0.00 0.00 4.79
608 639 2.847327 TATACTACTCCCTCCGTCCG 57.153 55.000 0.00 0.00 0.00 4.79
609 640 1.135094 ATACTACTCCCTCCGTCCGA 58.865 55.000 0.00 0.00 0.00 4.55
610 641 0.911769 TACTACTCCCTCCGTCCGAA 59.088 55.000 0.00 0.00 0.00 4.30
611 642 0.038744 ACTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
612 643 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
613 644 1.755380 CTACTCCCTCCGTCCGAAAAT 59.245 52.381 0.00 0.00 0.00 1.82
614 645 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
615 646 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
616 647 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
617 648 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
618 649 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
619 650 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
620 651 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
621 652 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
622 653 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
623 654 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
624 655 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
625 656 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
626 657 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
627 658 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
628 659 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
629 660 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
630 661 8.020819 GTCCGAAAATACTTGTCATCAAAATGA 58.979 33.333 0.00 0.00 39.63 2.57
631 662 8.572185 TCCGAAAATACTTGTCATCAAAATGAA 58.428 29.630 0.00 0.00 43.42 2.57
632 663 8.638565 CCGAAAATACTTGTCATCAAAATGAAC 58.361 33.333 0.00 0.00 43.42 3.18
633 664 9.179552 CGAAAATACTTGTCATCAAAATGAACA 57.820 29.630 0.00 0.00 43.42 3.18
639 670 8.200364 ACTTGTCATCAAAATGAACAAAAAGG 57.800 30.769 0.87 0.00 43.42 3.11
640 671 7.280652 ACTTGTCATCAAAATGAACAAAAAGGG 59.719 33.333 0.87 0.00 43.42 3.95
641 672 6.054295 TGTCATCAAAATGAACAAAAAGGGG 58.946 36.000 0.00 0.00 43.42 4.79
642 673 6.054941 GTCATCAAAATGAACAAAAAGGGGT 58.945 36.000 0.00 0.00 43.42 4.95
643 674 6.018016 GTCATCAAAATGAACAAAAAGGGGTG 60.018 38.462 0.00 0.00 43.42 4.61
644 675 5.428184 TCAAAATGAACAAAAAGGGGTGT 57.572 34.783 0.00 0.00 0.00 4.16
645 676 6.546428 TCAAAATGAACAAAAAGGGGTGTA 57.454 33.333 0.00 0.00 0.00 2.90
646 677 7.130681 TCAAAATGAACAAAAAGGGGTGTAT 57.869 32.000 0.00 0.00 0.00 2.29
647 678 7.213678 TCAAAATGAACAAAAAGGGGTGTATC 58.786 34.615 0.00 0.00 0.00 2.24
648 679 6.994421 AAATGAACAAAAAGGGGTGTATCT 57.006 33.333 0.00 0.00 0.00 1.98
649 680 8.364142 CAAAATGAACAAAAAGGGGTGTATCTA 58.636 33.333 0.00 0.00 0.00 1.98
650 681 7.703058 AATGAACAAAAAGGGGTGTATCTAG 57.297 36.000 0.00 0.00 0.00 2.43
651 682 6.442541 TGAACAAAAAGGGGTGTATCTAGA 57.557 37.500 0.00 0.00 0.00 2.43
652 683 6.843752 TGAACAAAAAGGGGTGTATCTAGAA 58.156 36.000 0.00 0.00 0.00 2.10
653 684 6.713450 TGAACAAAAAGGGGTGTATCTAGAAC 59.287 38.462 0.00 0.00 0.00 3.01
654 685 6.449830 ACAAAAAGGGGTGTATCTAGAACT 57.550 37.500 0.00 0.00 0.00 3.01
655 686 7.563724 ACAAAAAGGGGTGTATCTAGAACTA 57.436 36.000 0.00 0.00 0.00 2.24
656 687 7.981142 ACAAAAAGGGGTGTATCTAGAACTAA 58.019 34.615 0.00 0.00 0.00 2.24
657 688 8.442374 ACAAAAAGGGGTGTATCTAGAACTAAA 58.558 33.333 0.00 0.00 0.00 1.85
658 689 9.292195 CAAAAAGGGGTGTATCTAGAACTAAAA 57.708 33.333 0.00 0.00 0.00 1.52
662 693 8.849543 AGGGGTGTATCTAGAACTAAAATACA 57.150 34.615 0.00 0.00 32.07 2.29
663 694 9.448587 AGGGGTGTATCTAGAACTAAAATACAT 57.551 33.333 0.00 3.35 35.81 2.29
664 695 9.708092 GGGGTGTATCTAGAACTAAAATACATC 57.292 37.037 0.00 13.73 35.81 3.06
681 712 9.901172 AAAATACATCTAAATACGTTCCCTTCT 57.099 29.630 0.00 0.00 0.00 2.85
711 742 8.889849 ATTTTAATGACAAGTATTTTCGGACG 57.110 30.769 0.00 0.00 0.00 4.79
712 743 4.939509 AATGACAAGTATTTTCGGACGG 57.060 40.909 0.00 0.00 0.00 4.79
713 744 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
714 745 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
715 746 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
716 747 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
717 748 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
718 749 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
719 750 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
720 751 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
721 752 1.856629 TTTTCGGACGGAGGGAGTAT 58.143 50.000 0.00 0.00 0.00 2.12
726 757 0.388294 GGACGGAGGGAGTATTTCGG 59.612 60.000 0.00 0.00 0.00 4.30
934 976 3.570212 GTGCACACCCCACCCTCT 61.570 66.667 13.17 0.00 0.00 3.69
1584 1626 3.978687 CGAAGGTATCGTAGATTTGGCT 58.021 45.455 0.00 0.00 46.52 4.75
1781 1826 0.605319 CGTTTGCCTTCTGCTGGGTA 60.605 55.000 0.00 0.00 42.00 3.69
1790 1835 3.947834 CCTTCTGCTGGGTATTTTAGGTG 59.052 47.826 0.00 0.00 0.00 4.00
1827 1872 4.225942 TGCTCCAGGTTGATCATAAACTCT 59.774 41.667 0.00 0.00 0.00 3.24
1860 1905 2.159531 CGTGATCAACGCAATGAATGGT 60.160 45.455 0.00 0.00 46.99 3.55
1879 1925 0.321564 TGGTGGCAATTCTCAGGACG 60.322 55.000 0.00 0.00 0.00 4.79
1933 1979 2.365617 TGTCTCGGGATCTTATTCAGGC 59.634 50.000 0.00 0.00 0.00 4.85
2040 2086 1.073897 GATGATGCCCCTAGTGCCC 59.926 63.158 0.00 0.00 0.00 5.36
2619 2824 6.182039 TGTGTGAACTAATTCTGCATTAGC 57.818 37.500 6.92 0.00 46.09 3.09
2650 2855 7.822822 GTCTAGGTGTTCTTATTTTTGGCTCTA 59.177 37.037 0.00 0.00 0.00 2.43
2730 2937 5.121811 AGAGAACGGATTCATTGATCTTGG 58.878 41.667 0.00 0.00 37.29 3.61
2779 2986 7.690454 ATATCACCCGGATCCATCATAATAA 57.310 36.000 13.41 0.00 37.44 1.40
2815 3022 3.039011 ACAAGATTACCCTCCGTAGCAT 58.961 45.455 0.00 0.00 0.00 3.79
2940 3147 8.735315 CCATGTATAATGTTTCCTTGTGTTACA 58.265 33.333 0.00 0.00 0.00 2.41
3075 3282 4.335594 CGGTATGTCATCCCTTTTCCTTTC 59.664 45.833 0.00 0.00 0.00 2.62
3114 3321 9.914131 TGCATGTATTACATATCTGAACTACTC 57.086 33.333 8.95 0.00 36.53 2.59
3115 3322 9.360093 GCATGTATTACATATCTGAACTACTCC 57.640 37.037 8.95 0.00 36.53 3.85
3116 3323 9.862371 CATGTATTACATATCTGAACTACTCCC 57.138 37.037 8.95 0.00 36.53 4.30
3117 3324 9.830186 ATGTATTACATATCTGAACTACTCCCT 57.170 33.333 7.55 0.00 36.99 4.20
3118 3325 9.298250 TGTATTACATATCTGAACTACTCCCTC 57.702 37.037 0.00 0.00 0.00 4.30
3119 3326 7.784470 ATTACATATCTGAACTACTCCCTCC 57.216 40.000 0.00 0.00 0.00 4.30
3120 3327 4.145807 ACATATCTGAACTACTCCCTCCG 58.854 47.826 0.00 0.00 0.00 4.63
3121 3328 2.830651 ATCTGAACTACTCCCTCCGT 57.169 50.000 0.00 0.00 0.00 4.69
3122 3329 2.599408 TCTGAACTACTCCCTCCGTT 57.401 50.000 0.00 0.00 0.00 4.44
3123 3330 2.444421 TCTGAACTACTCCCTCCGTTC 58.556 52.381 0.00 0.00 37.02 3.95
3124 3331 1.477295 CTGAACTACTCCCTCCGTTCC 59.523 57.143 0.00 0.00 35.97 3.62
3125 3332 1.076677 TGAACTACTCCCTCCGTTCCT 59.923 52.381 0.00 0.00 35.97 3.36
3126 3333 2.309755 TGAACTACTCCCTCCGTTCCTA 59.690 50.000 0.00 0.00 35.97 2.94
3127 3334 3.245371 TGAACTACTCCCTCCGTTCCTAA 60.245 47.826 0.00 0.00 35.97 2.69
3128 3335 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
3129 3336 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
3130 3337 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
3131 3338 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
3132 3339 6.856757 ACTACTCCCTCCGTTCCTAAATATA 58.143 40.000 0.00 0.00 0.00 0.86
3133 3340 7.300658 ACTACTCCCTCCGTTCCTAAATATAA 58.699 38.462 0.00 0.00 0.00 0.98
3134 3341 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
3135 3342 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
3136 3343 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
3137 3344 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
3138 3345 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
3139 3346 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
3140 3347 7.656542 CCCTCCGTTCCTAAATATAAGTCTTTC 59.343 40.741 0.00 0.00 0.00 2.62
3141 3348 8.422566 CCTCCGTTCCTAAATATAAGTCTTTCT 58.577 37.037 0.00 0.00 0.00 2.52
3168 3375 9.698309 AGAGATTTCAATATGAACTACATACGG 57.302 33.333 0.00 0.00 43.12 4.02
3169 3376 9.692749 GAGATTTCAATATGAACTACATACGGA 57.307 33.333 0.00 0.00 43.12 4.69
3172 3379 9.778741 ATTTCAATATGAACTACATACGGATGT 57.221 29.630 19.12 19.12 43.12 3.06
3181 3388 8.876790 TGAACTACATACGGATGTATATAGACG 58.123 37.037 20.64 9.79 45.42 4.18
3182 3389 8.783833 AACTACATACGGATGTATATAGACGT 57.216 34.615 20.64 10.41 45.42 4.34
3183 3390 9.875691 AACTACATACGGATGTATATAGACGTA 57.124 33.333 20.64 9.65 45.42 3.57
3184 3391 9.526713 ACTACATACGGATGTATATAGACGTAG 57.473 37.037 20.64 9.36 45.42 3.51
3185 3392 9.526713 CTACATACGGATGTATATAGACGTAGT 57.473 37.037 20.64 11.55 45.77 2.73
3186 3393 8.783833 ACATACGGATGTATATAGACGTAGTT 57.216 34.615 12.79 0.00 43.41 2.24
3187 3394 9.224267 ACATACGGATGTATATAGACGTAGTTT 57.776 33.333 12.79 0.00 43.41 2.66
3203 3410 7.684937 ACGTAGTTTAGAGTGTAGATTCACT 57.315 36.000 0.00 0.00 45.46 3.41
3213 3420 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
3214 3421 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
3215 3422 5.412594 GTGTAGATTCACTCATTTTGCTCCA 59.587 40.000 0.00 0.00 35.68 3.86
3216 3423 6.094603 GTGTAGATTCACTCATTTTGCTCCAT 59.905 38.462 0.00 0.00 35.68 3.41
3217 3424 7.280876 GTGTAGATTCACTCATTTTGCTCCATA 59.719 37.037 0.00 0.00 35.68 2.74
3218 3425 7.994911 TGTAGATTCACTCATTTTGCTCCATAT 59.005 33.333 0.00 0.00 0.00 1.78
3219 3426 7.273320 AGATTCACTCATTTTGCTCCATATG 57.727 36.000 0.00 0.00 0.00 1.78
3220 3427 6.832384 AGATTCACTCATTTTGCTCCATATGT 59.168 34.615 1.24 0.00 0.00 2.29
3221 3428 7.994911 AGATTCACTCATTTTGCTCCATATGTA 59.005 33.333 1.24 0.00 0.00 2.29
3222 3429 7.558161 TTCACTCATTTTGCTCCATATGTAG 57.442 36.000 1.24 0.00 0.00 2.74
3223 3430 6.653020 TCACTCATTTTGCTCCATATGTAGT 58.347 36.000 1.24 0.00 0.00 2.73
3224 3431 6.763135 TCACTCATTTTGCTCCATATGTAGTC 59.237 38.462 1.24 0.00 0.00 2.59
3225 3432 6.765036 CACTCATTTTGCTCCATATGTAGTCT 59.235 38.462 1.24 0.00 0.00 3.24
3226 3433 7.928167 CACTCATTTTGCTCCATATGTAGTCTA 59.072 37.037 1.24 0.00 0.00 2.59
3227 3434 8.654997 ACTCATTTTGCTCCATATGTAGTCTAT 58.345 33.333 1.24 0.00 0.00 1.98
3266 3473 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
3267 3474 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
3268 3475 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
3269 3476 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
3270 3477 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
3271 3478 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
3287 3494 9.021807 CGGAGGGAGTATTATCTTAAACTGATA 57.978 37.037 0.00 0.00 0.00 2.15
3636 3844 6.074648 TGTCAAGATGGTTGGTTTAAGGAAT 58.925 36.000 0.00 0.00 0.00 3.01
3637 3845 6.553100 TGTCAAGATGGTTGGTTTAAGGAATT 59.447 34.615 0.00 0.00 0.00 2.17
3638 3846 7.070571 TGTCAAGATGGTTGGTTTAAGGAATTT 59.929 33.333 0.00 0.00 0.00 1.82
3639 3847 7.931407 GTCAAGATGGTTGGTTTAAGGAATTTT 59.069 33.333 0.00 0.00 0.00 1.82
3640 3848 8.490311 TCAAGATGGTTGGTTTAAGGAATTTTT 58.510 29.630 0.00 0.00 0.00 1.94
3641 3849 9.771534 CAAGATGGTTGGTTTAAGGAATTTTTA 57.228 29.630 0.00 0.00 0.00 1.52
3665 3873 2.588464 TTTTGCGGGTGGATTAAGGA 57.412 45.000 0.00 0.00 0.00 3.36
3666 3874 2.588464 TTTGCGGGTGGATTAAGGAA 57.412 45.000 0.00 0.00 0.00 3.36
3672 3880 3.194755 GCGGGTGGATTAAGGAAAATTGT 59.805 43.478 0.00 0.00 0.00 2.71
3684 3892 5.343307 AGGAAAATTGTGAACAAGCAACT 57.657 34.783 1.94 0.00 39.47 3.16
3705 3913 1.079127 GGTACAGTGCCTGCATCGT 60.079 57.895 0.00 0.00 34.37 3.73
3706 3914 0.174845 GGTACAGTGCCTGCATCGTA 59.825 55.000 0.00 0.00 34.37 3.43
3709 3917 1.156736 ACAGTGCCTGCATCGTAAAC 58.843 50.000 0.00 0.00 34.37 2.01
3710 3918 1.155889 CAGTGCCTGCATCGTAAACA 58.844 50.000 0.00 0.00 0.00 2.83
3829 4062 6.861065 TTAATGACTGGTTCTTCAGTGTTC 57.139 37.500 2.00 0.00 46.76 3.18
3894 4130 9.276590 CTAATGATGATGCCTATGTTGTTTAGA 57.723 33.333 0.00 0.00 0.00 2.10
3995 4231 6.893759 AGATGTAATACTCGAATCACTCTCG 58.106 40.000 0.00 0.00 37.66 4.04
4048 4284 3.304257 GCTGATAGATGGCGACCAAAATG 60.304 47.826 2.68 0.00 36.95 2.32
4115 4351 0.179045 CCCCTTTATGGAGCTGGTCG 60.179 60.000 0.00 0.00 38.35 4.79
4127 4363 1.135373 AGCTGGTCGTTGACTACATCG 60.135 52.381 0.00 0.00 39.59 3.84
4247 4613 1.901159 TGGTCAAATGGCAATGAAGGG 59.099 47.619 7.78 0.00 0.00 3.95
4374 4742 1.207791 ATTGGGTGCTACTCCCTCTG 58.792 55.000 6.31 0.00 44.84 3.35
4391 4759 8.425703 ACTCCCTCTGTAAAGAAATATAAGAGC 58.574 37.037 0.00 0.00 0.00 4.09
4423 4791 8.773404 ATTACTACTTTAGTGATTCAAACGCT 57.227 30.769 0.00 0.00 39.81 5.07
4424 4792 6.707599 ACTACTTTAGTGATTCAAACGCTC 57.292 37.500 0.00 0.00 37.69 5.03
4425 4793 6.456501 ACTACTTTAGTGATTCAAACGCTCT 58.543 36.000 0.00 0.00 37.69 4.09
4426 4794 6.929606 ACTACTTTAGTGATTCAAACGCTCTT 59.070 34.615 0.00 0.00 37.69 2.85
4427 4795 8.086522 ACTACTTTAGTGATTCAAACGCTCTTA 58.913 33.333 0.00 0.00 37.69 2.10
4428 4796 7.907214 ACTTTAGTGATTCAAACGCTCTTAT 57.093 32.000 0.00 0.00 0.00 1.73
4429 4797 8.997621 ACTTTAGTGATTCAAACGCTCTTATA 57.002 30.769 0.00 0.00 0.00 0.98
4430 4798 9.601217 ACTTTAGTGATTCAAACGCTCTTATAT 57.399 29.630 0.00 0.00 0.00 0.86
4528 4907 6.925610 AACTAGAATTGCATCGCATCTTTA 57.074 33.333 0.00 0.00 38.76 1.85
4557 4936 6.151648 TGGTGATTGAGGAAATGTTGAAGATC 59.848 38.462 0.00 0.00 0.00 2.75
4577 4956 8.827177 AAGATCAATAATATGCTTGCAAATGG 57.173 30.769 0.00 0.00 0.00 3.16
4600 4979 6.116126 GGGCTTATGTCTTGTCAATAGAACT 58.884 40.000 0.00 0.00 0.00 3.01
4623 5003 2.223971 CCATGATGAGCAAGATTTGGGC 60.224 50.000 0.00 0.00 0.00 5.36
4673 5053 3.624326 CCATAATGGCGTGTACAATGG 57.376 47.619 0.00 1.20 0.00 3.16
4674 5054 2.293122 CCATAATGGCGTGTACAATGGG 59.707 50.000 11.21 0.00 30.90 4.00
4715 5095 1.142870 GGCCAGTGAACCCTATATGCA 59.857 52.381 0.00 0.00 0.00 3.96
4717 5097 2.421388 GCCAGTGAACCCTATATGCACA 60.421 50.000 0.00 0.00 32.16 4.57
4719 5099 4.269183 CCAGTGAACCCTATATGCACAAA 58.731 43.478 0.00 0.00 32.16 2.83
4720 5100 4.704540 CCAGTGAACCCTATATGCACAAAA 59.295 41.667 0.00 0.00 32.16 2.44
4721 5101 5.360714 CCAGTGAACCCTATATGCACAAAAT 59.639 40.000 0.00 0.00 32.16 1.82
4777 5158 9.696917 AAAACTAATTTGGAAACAGATGTGATC 57.303 29.630 0.00 0.00 44.54 2.92
4778 5159 8.408043 AACTAATTTGGAAACAGATGTGATCA 57.592 30.769 0.00 0.00 44.54 2.92
4779 5160 8.408043 ACTAATTTGGAAACAGATGTGATCAA 57.592 30.769 0.00 0.00 44.54 2.57
4780 5161 8.517878 ACTAATTTGGAAACAGATGTGATCAAG 58.482 33.333 0.00 0.00 44.54 3.02
4781 5162 6.906157 ATTTGGAAACAGATGTGATCAAGT 57.094 33.333 0.00 0.00 44.54 3.16
4782 5163 8.408043 AATTTGGAAACAGATGTGATCAAGTA 57.592 30.769 0.00 0.00 44.54 2.24
4783 5164 8.585471 ATTTGGAAACAGATGTGATCAAGTAT 57.415 30.769 0.00 0.00 44.54 2.12
4824 5205 6.267471 AGTTTTGCCAAGGAATGACTTCAATA 59.733 34.615 0.00 0.00 32.70 1.90
4825 5206 5.902613 TTGCCAAGGAATGACTTCAATAG 57.097 39.130 0.00 0.00 32.70 1.73
4826 5207 4.922206 TGCCAAGGAATGACTTCAATAGT 58.078 39.130 0.00 0.00 40.71 2.12
4827 5208 6.061022 TGCCAAGGAATGACTTCAATAGTA 57.939 37.500 0.00 0.00 37.17 1.82
4829 5210 7.118723 TGCCAAGGAATGACTTCAATAGTATT 58.881 34.615 0.00 0.00 37.17 1.89
4830 5211 7.067372 TGCCAAGGAATGACTTCAATAGTATTG 59.933 37.037 15.56 15.56 37.17 1.90
4831 5212 7.067494 GCCAAGGAATGACTTCAATAGTATTGT 59.933 37.037 19.85 3.79 37.17 2.71
4834 5215 7.056635 AGGAATGACTTCAATAGTATTGTGGG 58.943 38.462 19.85 13.82 37.17 4.61
4835 5216 6.238759 GGAATGACTTCAATAGTATTGTGGGC 60.239 42.308 19.85 16.06 37.17 5.36
4836 5217 4.188462 TGACTTCAATAGTATTGTGGGCG 58.812 43.478 19.85 9.33 37.17 6.13
4837 5218 3.541632 ACTTCAATAGTATTGTGGGCGG 58.458 45.455 19.85 9.21 34.56 6.13
4839 5220 3.916359 TCAATAGTATTGTGGGCGGAA 57.084 42.857 19.85 0.00 0.00 4.30
4885 5266 8.970691 ATTACAAGTTGTTCATGCTATTTGTC 57.029 30.769 14.90 0.00 30.30 3.18
4886 5267 6.389830 ACAAGTTGTTCATGCTATTTGTCA 57.610 33.333 1.64 0.00 0.00 3.58
4887 5268 6.985117 ACAAGTTGTTCATGCTATTTGTCAT 58.015 32.000 1.64 0.00 0.00 3.06
4888 5269 7.436118 ACAAGTTGTTCATGCTATTTGTCATT 58.564 30.769 1.64 0.00 0.00 2.57
4889 5270 7.383029 ACAAGTTGTTCATGCTATTTGTCATTG 59.617 33.333 1.64 0.00 0.00 2.82
4890 5271 6.985117 AGTTGTTCATGCTATTTGTCATTGT 58.015 32.000 0.00 0.00 0.00 2.71
4891 5272 7.436118 AGTTGTTCATGCTATTTGTCATTGTT 58.564 30.769 0.00 0.00 0.00 2.83
4892 5273 7.927629 AGTTGTTCATGCTATTTGTCATTGTTT 59.072 29.630 0.00 0.00 0.00 2.83
4893 5274 8.550376 GTTGTTCATGCTATTTGTCATTGTTTT 58.450 29.630 0.00 0.00 0.00 2.43
4894 5275 8.659925 TGTTCATGCTATTTGTCATTGTTTTT 57.340 26.923 0.00 0.00 0.00 1.94
4916 5297 6.761099 TTTTCTTTTTGCCCGCTATATACA 57.239 33.333 0.00 0.00 0.00 2.29
4917 5298 6.761099 TTTCTTTTTGCCCGCTATATACAA 57.239 33.333 0.00 0.00 0.00 2.41
4918 5299 6.371809 TTCTTTTTGCCCGCTATATACAAG 57.628 37.500 0.00 0.00 0.00 3.16
4919 5300 5.433526 TCTTTTTGCCCGCTATATACAAGT 58.566 37.500 0.00 0.00 0.00 3.16
4920 5301 5.883673 TCTTTTTGCCCGCTATATACAAGTT 59.116 36.000 0.00 0.00 0.00 2.66
4921 5302 5.493133 TTTTGCCCGCTATATACAAGTTG 57.507 39.130 0.00 0.00 0.00 3.16
4922 5303 3.830744 TGCCCGCTATATACAAGTTGT 57.169 42.857 14.05 14.05 0.00 3.32
4923 5304 4.940905 TGCCCGCTATATACAAGTTGTA 57.059 40.909 17.74 17.74 37.24 2.41
4924 5305 4.624015 TGCCCGCTATATACAAGTTGTAC 58.376 43.478 17.79 4.39 35.42 2.90
4925 5306 4.099727 TGCCCGCTATATACAAGTTGTACA 59.900 41.667 17.79 7.21 35.42 2.90
4926 5307 5.221561 TGCCCGCTATATACAAGTTGTACAT 60.222 40.000 17.79 14.39 35.42 2.29
4927 5308 5.120208 GCCCGCTATATACAAGTTGTACATG 59.880 44.000 17.79 8.24 35.42 3.21
4928 5309 5.120208 CCCGCTATATACAAGTTGTACATGC 59.880 44.000 17.79 15.39 35.42 4.06
4929 5310 5.926542 CCGCTATATACAAGTTGTACATGCT 59.073 40.000 17.79 4.72 35.42 3.79
4930 5311 7.088272 CCGCTATATACAAGTTGTACATGCTA 58.912 38.462 17.79 6.79 35.42 3.49
4931 5312 7.759886 CCGCTATATACAAGTTGTACATGCTAT 59.240 37.037 17.79 13.01 35.42 2.97
4932 5313 9.140286 CGCTATATACAAGTTGTACATGCTATT 57.860 33.333 17.79 2.60 35.42 1.73
4937 5318 6.254281 ACAAGTTGTACATGCTATTTGTCC 57.746 37.500 6.75 0.00 0.00 4.02
4938 5319 6.003950 ACAAGTTGTACATGCTATTTGTCCT 58.996 36.000 6.75 0.00 0.00 3.85
4939 5320 6.490040 ACAAGTTGTACATGCTATTTGTCCTT 59.510 34.615 6.75 0.00 0.00 3.36
4940 5321 7.014230 ACAAGTTGTACATGCTATTTGTCCTTT 59.986 33.333 6.75 0.00 0.00 3.11
4941 5322 7.524717 AGTTGTACATGCTATTTGTCCTTTT 57.475 32.000 0.00 0.00 0.00 2.27
4942 5323 7.951591 AGTTGTACATGCTATTTGTCCTTTTT 58.048 30.769 0.00 0.00 0.00 1.94
4964 5345 4.835284 TTTTTCCTTTTTGCCCTGAAGT 57.165 36.364 0.00 0.00 0.00 3.01
4965 5346 4.400529 TTTTCCTTTTTGCCCTGAAGTC 57.599 40.909 0.00 0.00 0.00 3.01
4966 5347 2.746279 TCCTTTTTGCCCTGAAGTCA 57.254 45.000 0.00 0.00 0.00 3.41
4967 5348 3.025322 TCCTTTTTGCCCTGAAGTCAA 57.975 42.857 0.00 0.00 0.00 3.18
4968 5349 3.575805 TCCTTTTTGCCCTGAAGTCAAT 58.424 40.909 0.00 0.00 0.00 2.57
4969 5350 3.321682 TCCTTTTTGCCCTGAAGTCAATG 59.678 43.478 0.00 0.00 0.00 2.82
4970 5351 3.070015 CCTTTTTGCCCTGAAGTCAATGT 59.930 43.478 0.00 0.00 0.00 2.71
4971 5352 3.731652 TTTTGCCCTGAAGTCAATGTG 57.268 42.857 0.00 0.00 0.00 3.21
4972 5353 2.655090 TTGCCCTGAAGTCAATGTGA 57.345 45.000 0.00 0.00 0.00 3.58
4973 5354 2.655090 TGCCCTGAAGTCAATGTGAA 57.345 45.000 0.00 0.00 0.00 3.18
4974 5355 3.159213 TGCCCTGAAGTCAATGTGAAT 57.841 42.857 0.00 0.00 0.00 2.57
4975 5356 3.499338 TGCCCTGAAGTCAATGTGAATT 58.501 40.909 0.00 0.00 37.39 2.17
4976 5357 4.661222 TGCCCTGAAGTCAATGTGAATTA 58.339 39.130 0.00 0.00 34.57 1.40
4977 5358 5.263599 TGCCCTGAAGTCAATGTGAATTAT 58.736 37.500 0.00 0.00 34.57 1.28
4978 5359 5.716228 TGCCCTGAAGTCAATGTGAATTATT 59.284 36.000 0.00 0.00 34.57 1.40
4979 5360 6.211184 TGCCCTGAAGTCAATGTGAATTATTT 59.789 34.615 0.00 0.00 34.57 1.40
4980 5361 6.753744 GCCCTGAAGTCAATGTGAATTATTTC 59.246 38.462 0.00 0.00 34.57 2.17
4981 5362 7.363268 GCCCTGAAGTCAATGTGAATTATTTCT 60.363 37.037 0.00 0.00 34.57 2.52
4982 5363 8.526147 CCCTGAAGTCAATGTGAATTATTTCTT 58.474 33.333 0.00 0.00 34.57 2.52
4983 5364 9.350357 CCTGAAGTCAATGTGAATTATTTCTTG 57.650 33.333 0.00 0.00 34.57 3.02
4984 5365 9.350357 CTGAAGTCAATGTGAATTATTTCTTGG 57.650 33.333 0.00 0.00 34.57 3.61
4985 5366 7.814107 TGAAGTCAATGTGAATTATTTCTTGGC 59.186 33.333 0.00 0.00 34.57 4.52
4986 5367 7.230849 AGTCAATGTGAATTATTTCTTGGCA 57.769 32.000 5.68 0.00 32.78 4.92
4987 5368 7.669427 AGTCAATGTGAATTATTTCTTGGCAA 58.331 30.769 0.00 0.00 32.78 4.52
4988 5369 8.149647 AGTCAATGTGAATTATTTCTTGGCAAA 58.850 29.630 0.00 0.00 32.78 3.68
4989 5370 8.772705 GTCAATGTGAATTATTTCTTGGCAAAA 58.227 29.630 0.00 0.00 32.78 2.44
4990 5371 8.772705 TCAATGTGAATTATTTCTTGGCAAAAC 58.227 29.630 0.00 0.00 32.78 2.43
4991 5372 8.776470 CAATGTGAATTATTTCTTGGCAAAACT 58.224 29.630 0.00 0.00 32.78 2.66
4992 5373 8.907222 ATGTGAATTATTTCTTGGCAAAACTT 57.093 26.923 0.00 0.00 32.78 2.66
4993 5374 8.729805 TGTGAATTATTTCTTGGCAAAACTTT 57.270 26.923 0.00 0.00 32.78 2.66
4994 5375 9.171877 TGTGAATTATTTCTTGGCAAAACTTTT 57.828 25.926 0.00 0.00 32.78 2.27
5000 5381 6.396459 TTTCTTGGCAAAACTTTTTACACG 57.604 33.333 0.00 0.00 0.00 4.49
5001 5382 5.312120 TCTTGGCAAAACTTTTTACACGA 57.688 34.783 0.00 0.00 0.00 4.35
5002 5383 5.336744 TCTTGGCAAAACTTTTTACACGAG 58.663 37.500 0.00 0.00 0.00 4.18
5003 5384 4.705337 TGGCAAAACTTTTTACACGAGT 57.295 36.364 0.00 0.00 0.00 4.18
5004 5385 5.061920 TGGCAAAACTTTTTACACGAGTT 57.938 34.783 0.00 0.00 35.27 3.01
5005 5386 5.096849 TGGCAAAACTTTTTACACGAGTTC 58.903 37.500 0.00 0.00 32.79 3.01
5006 5387 5.096849 GGCAAAACTTTTTACACGAGTTCA 58.903 37.500 0.00 0.00 32.79 3.18
5007 5388 5.573669 GGCAAAACTTTTTACACGAGTTCAA 59.426 36.000 0.00 0.00 32.79 2.69
5008 5389 6.254804 GGCAAAACTTTTTACACGAGTTCAAT 59.745 34.615 0.00 0.00 32.79 2.57
5009 5390 7.432838 GGCAAAACTTTTTACACGAGTTCAATA 59.567 33.333 0.00 0.00 32.79 1.90
5010 5391 8.257166 GCAAAACTTTTTACACGAGTTCAATAC 58.743 33.333 0.00 0.00 32.79 1.89
5011 5392 8.458328 CAAAACTTTTTACACGAGTTCAATACG 58.542 33.333 0.00 0.00 32.79 3.06
5012 5393 6.833342 ACTTTTTACACGAGTTCAATACGT 57.167 33.333 0.00 0.00 40.87 3.57
5023 5404 7.841486 ACGAGTTCAATACGTGATCATATTTG 58.159 34.615 0.00 1.73 38.79 2.32
5024 5405 7.491372 ACGAGTTCAATACGTGATCATATTTGT 59.509 33.333 0.00 0.00 38.79 2.83
5025 5406 8.328146 CGAGTTCAATACGTGATCATATTTGTT 58.672 33.333 0.00 0.00 35.70 2.83
5026 5407 9.988350 GAGTTCAATACGTGATCATATTTGTTT 57.012 29.630 0.00 0.00 35.70 2.83
5027 5408 9.988350 AGTTCAATACGTGATCATATTTGTTTC 57.012 29.630 0.00 0.00 35.70 2.78
5028 5409 9.221775 GTTCAATACGTGATCATATTTGTTTCC 57.778 33.333 0.00 0.00 35.70 3.13
5029 5410 8.499403 TCAATACGTGATCATATTTGTTTCCA 57.501 30.769 0.00 0.00 0.00 3.53
5030 5411 8.611757 TCAATACGTGATCATATTTGTTTCCAG 58.388 33.333 0.00 0.00 0.00 3.86
5031 5412 8.611757 CAATACGTGATCATATTTGTTTCCAGA 58.388 33.333 0.00 0.00 0.00 3.86
5032 5413 8.908786 ATACGTGATCATATTTGTTTCCAGAT 57.091 30.769 0.00 0.00 0.00 2.90
5033 5414 9.996554 ATACGTGATCATATTTGTTTCCAGATA 57.003 29.630 0.00 0.00 0.00 1.98
5034 5415 8.731275 ACGTGATCATATTTGTTTCCAGATAA 57.269 30.769 0.00 0.00 0.00 1.75
5035 5416 8.830580 ACGTGATCATATTTGTTTCCAGATAAG 58.169 33.333 0.00 0.00 0.00 1.73
5036 5417 9.045223 CGTGATCATATTTGTTTCCAGATAAGA 57.955 33.333 0.00 0.00 0.00 2.10
5047 5428 9.965824 TTGTTTCCAGATAAGATTTGACTTTTC 57.034 29.630 0.00 0.00 0.00 2.29
5048 5429 8.289618 TGTTTCCAGATAAGATTTGACTTTTCG 58.710 33.333 0.00 0.00 34.65 3.46
5049 5430 7.979444 TTCCAGATAAGATTTGACTTTTCGT 57.021 32.000 0.00 0.00 34.65 3.85
5050 5431 9.496873 TTTCCAGATAAGATTTGACTTTTCGTA 57.503 29.630 0.00 0.00 34.65 3.43
5051 5432 9.667107 TTCCAGATAAGATTTGACTTTTCGTAT 57.333 29.630 0.00 0.00 34.65 3.06
5052 5433 9.098355 TCCAGATAAGATTTGACTTTTCGTATG 57.902 33.333 0.00 0.00 34.65 2.39
5053 5434 9.098355 CCAGATAAGATTTGACTTTTCGTATGA 57.902 33.333 0.00 0.00 34.65 2.15
5054 5435 9.907576 CAGATAAGATTTGACTTTTCGTATGAC 57.092 33.333 0.00 0.00 34.65 3.06
5055 5436 9.877178 AGATAAGATTTGACTTTTCGTATGACT 57.123 29.630 0.00 0.00 34.65 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.879295 TCAGTTGAAGAAGTGAAGGCTTG 59.121 43.478 3.46 0.00 38.37 4.01
30 31 1.475280 CCCATGGTCGACGAGAACTTA 59.525 52.381 11.73 0.00 37.49 2.24
33 34 0.037605 AACCCATGGTCGACGAGAAC 60.038 55.000 11.73 0.00 33.12 3.01
37 38 1.888018 GAGAACCCATGGTCGACGA 59.112 57.895 11.73 5.99 33.12 4.20
41 42 1.447838 CACCGAGAACCCATGGTCG 60.448 63.158 11.73 13.04 33.12 4.79
51 52 1.066605 GTTCTATAGCGCCACCGAGAA 59.933 52.381 2.29 3.64 36.29 2.87
54 55 1.000607 GATGTTCTATAGCGCCACCGA 60.001 52.381 2.29 0.00 36.29 4.69
55 56 1.419374 GATGTTCTATAGCGCCACCG 58.581 55.000 2.29 0.00 37.57 4.94
68 69 1.734465 CTTGCCCTCAAGTCGATGTTC 59.266 52.381 0.00 0.00 43.55 3.18
90 91 8.789767 TGACAATCCTTCCTCTATAAGATTCT 57.210 34.615 0.00 0.00 0.00 2.40
100 101 0.539051 CCGCTGACAATCCTTCCTCT 59.461 55.000 0.00 0.00 0.00 3.69
102 103 1.078143 GCCGCTGACAATCCTTCCT 60.078 57.895 0.00 0.00 0.00 3.36
106 107 1.134670 GTAAGAGCCGCTGACAATCCT 60.135 52.381 0.00 0.00 0.00 3.24
116 117 1.142097 GAGTGAGGGTAAGAGCCGC 59.858 63.158 0.00 0.00 41.56 6.53
119 120 0.173708 CACCGAGTGAGGGTAAGAGC 59.826 60.000 0.00 0.00 35.58 4.09
121 122 0.613853 CCCACCGAGTGAGGGTAAGA 60.614 60.000 5.71 0.00 37.81 2.10
128 129 1.976132 ATGATGGCCCACCGAGTGAG 61.976 60.000 0.00 0.00 39.70 3.51
149 150 2.044946 GGTTGGGCCTCTTGCGAT 60.045 61.111 4.53 0.00 42.61 4.58
167 168 3.006323 GTGCCTGATCCTACTACCATCTG 59.994 52.174 0.00 0.00 0.00 2.90
197 198 1.207791 CTGTGGTCCTTCCTAGCCAT 58.792 55.000 0.00 0.00 37.07 4.40
200 201 2.420687 CCATTCTGTGGTCCTTCCTAGC 60.421 54.545 0.00 0.00 43.44 3.42
215 216 2.649531 TTCGTCCAAACACCCATTCT 57.350 45.000 0.00 0.00 0.00 2.40
225 226 1.816224 GCCAAAGCCTATTCGTCCAAA 59.184 47.619 0.00 0.00 0.00 3.28
226 227 1.459450 GCCAAAGCCTATTCGTCCAA 58.541 50.000 0.00 0.00 0.00 3.53
246 248 3.297620 ACGCCTTGCCAGCCAAAG 61.298 61.111 0.00 0.00 31.94 2.77
257 259 0.667792 GAAGAGAAGACGCACGCCTT 60.668 55.000 0.00 0.00 0.00 4.35
262 264 2.062519 GGAACAGAAGAGAAGACGCAC 58.937 52.381 0.00 0.00 0.00 5.34
270 272 3.898123 AGCAGTTACAGGAACAGAAGAGA 59.102 43.478 0.00 0.00 40.86 3.10
275 277 1.961394 ACGAGCAGTTACAGGAACAGA 59.039 47.619 0.00 0.00 40.86 3.41
278 280 2.726832 AGACGAGCAGTTACAGGAAC 57.273 50.000 0.00 0.00 38.44 3.62
280 282 2.515854 AGAAGACGAGCAGTTACAGGA 58.484 47.619 0.00 0.00 0.00 3.86
282 284 3.246619 GGAAGAAGACGAGCAGTTACAG 58.753 50.000 0.00 0.00 0.00 2.74
283 285 2.029290 GGGAAGAAGACGAGCAGTTACA 60.029 50.000 0.00 0.00 0.00 2.41
284 286 2.231721 AGGGAAGAAGACGAGCAGTTAC 59.768 50.000 0.00 0.00 0.00 2.50
285 287 2.526432 AGGGAAGAAGACGAGCAGTTA 58.474 47.619 0.00 0.00 0.00 2.24
286 288 1.343069 AGGGAAGAAGACGAGCAGTT 58.657 50.000 0.00 0.00 0.00 3.16
287 289 1.001406 CAAGGGAAGAAGACGAGCAGT 59.999 52.381 0.00 0.00 0.00 4.40
288 290 1.001406 ACAAGGGAAGAAGACGAGCAG 59.999 52.381 0.00 0.00 0.00 4.24
289 291 1.000955 GACAAGGGAAGAAGACGAGCA 59.999 52.381 0.00 0.00 0.00 4.26
290 292 1.273886 AGACAAGGGAAGAAGACGAGC 59.726 52.381 0.00 0.00 0.00 5.03
295 297 2.158158 TGGAGGAGACAAGGGAAGAAGA 60.158 50.000 0.00 0.00 0.00 2.87
296 298 2.260822 TGGAGGAGACAAGGGAAGAAG 58.739 52.381 0.00 0.00 0.00 2.85
316 318 7.652524 TCAGAAGCTATCTAACAGAGTTCAT 57.347 36.000 0.00 0.00 36.32 2.57
324 326 7.093333 TGTGAAGGAATCAGAAGCTATCTAACA 60.093 37.037 0.00 0.00 39.19 2.41
355 357 8.526147 ACTAGCAAGCATTCAAAGATTACAAAT 58.474 29.630 0.00 0.00 0.00 2.32
356 358 7.885297 ACTAGCAAGCATTCAAAGATTACAAA 58.115 30.769 0.00 0.00 0.00 2.83
366 368 2.489329 GCCTCAACTAGCAAGCATTCAA 59.511 45.455 0.00 0.00 0.00 2.69
376 378 5.012328 AGTACTGTATTGCCTCAACTAGC 57.988 43.478 0.00 0.00 0.00 3.42
423 452 1.616865 CGGGTTGAACTCTACCAGACA 59.383 52.381 11.61 0.00 42.34 3.41
435 464 4.583086 GGGTTTGACCGGGTTGAA 57.417 55.556 6.32 0.00 39.83 2.69
461 490 2.443957 GAACACAACTCAAGCCGGCG 62.444 60.000 23.20 9.47 0.00 6.46
483 512 7.789273 TTGCAACATCAAAAACATCTTCAAT 57.211 28.000 0.00 0.00 0.00 2.57
484 513 7.333921 AGTTTGCAACATCAAAAACATCTTCAA 59.666 29.630 0.00 0.00 37.65 2.69
538 567 6.101881 CCAATCTTTAGAGGAGAAACCCCTAT 59.898 42.308 0.00 0.00 40.05 2.57
539 568 5.428783 CCAATCTTTAGAGGAGAAACCCCTA 59.571 44.000 0.00 0.00 40.05 3.53
568 599 4.617253 ATCGGATTAACATGATCCCGAA 57.383 40.909 17.58 2.74 39.97 4.30
578 609 6.888632 GGAGGGAGTAGTATATCGGATTAACA 59.111 42.308 0.00 0.00 0.00 2.41
591 622 0.911769 TTCGGACGGAGGGAGTAGTA 59.088 55.000 0.00 0.00 0.00 1.82
592 623 0.038744 TTTCGGACGGAGGGAGTAGT 59.961 55.000 0.00 0.00 0.00 2.73
593 624 1.180029 TTTTCGGACGGAGGGAGTAG 58.820 55.000 0.00 0.00 0.00 2.57
595 626 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
596 627 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
597 628 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
598 629 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
599 630 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
600 631 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
601 632 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
602 633 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
603 634 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
604 635 8.020819 TCATTTTGATGACAAGTATTTTCGGAC 58.979 33.333 0.00 0.00 37.32 4.79
605 636 8.105097 TCATTTTGATGACAAGTATTTTCGGA 57.895 30.769 0.00 0.00 37.32 4.55
606 637 8.638565 GTTCATTTTGATGACAAGTATTTTCGG 58.361 33.333 0.00 0.00 37.32 4.30
607 638 9.179552 TGTTCATTTTGATGACAAGTATTTTCG 57.820 29.630 0.00 0.00 37.32 3.46
613 644 9.311916 CCTTTTTGTTCATTTTGATGACAAGTA 57.688 29.630 0.00 0.00 37.32 2.24
614 645 7.280652 CCCTTTTTGTTCATTTTGATGACAAGT 59.719 33.333 0.00 0.00 37.32 3.16
615 646 7.254863 CCCCTTTTTGTTCATTTTGATGACAAG 60.255 37.037 0.00 0.00 37.32 3.16
616 647 6.541641 CCCCTTTTTGTTCATTTTGATGACAA 59.458 34.615 0.00 0.00 0.00 3.18
617 648 6.054295 CCCCTTTTTGTTCATTTTGATGACA 58.946 36.000 0.00 0.00 0.00 3.58
618 649 6.018016 CACCCCTTTTTGTTCATTTTGATGAC 60.018 38.462 0.00 0.00 0.00 3.06
619 650 6.054295 CACCCCTTTTTGTTCATTTTGATGA 58.946 36.000 0.00 0.00 0.00 2.92
620 651 5.821995 ACACCCCTTTTTGTTCATTTTGATG 59.178 36.000 0.00 0.00 0.00 3.07
621 652 6.000246 ACACCCCTTTTTGTTCATTTTGAT 58.000 33.333 0.00 0.00 0.00 2.57
622 653 5.428184 ACACCCCTTTTTGTTCATTTTGA 57.572 34.783 0.00 0.00 0.00 2.69
623 654 7.216494 AGATACACCCCTTTTTGTTCATTTTG 58.784 34.615 0.00 0.00 0.00 2.44
624 655 7.373617 AGATACACCCCTTTTTGTTCATTTT 57.626 32.000 0.00 0.00 0.00 1.82
625 656 6.994421 AGATACACCCCTTTTTGTTCATTT 57.006 33.333 0.00 0.00 0.00 2.32
626 657 7.466804 TCTAGATACACCCCTTTTTGTTCATT 58.533 34.615 0.00 0.00 0.00 2.57
627 658 7.027874 TCTAGATACACCCCTTTTTGTTCAT 57.972 36.000 0.00 0.00 0.00 2.57
628 659 6.442541 TCTAGATACACCCCTTTTTGTTCA 57.557 37.500 0.00 0.00 0.00 3.18
629 660 6.940867 AGTTCTAGATACACCCCTTTTTGTTC 59.059 38.462 0.00 0.00 0.00 3.18
630 661 6.849151 AGTTCTAGATACACCCCTTTTTGTT 58.151 36.000 0.00 0.00 0.00 2.83
631 662 6.449830 AGTTCTAGATACACCCCTTTTTGT 57.550 37.500 0.00 0.00 0.00 2.83
632 663 8.857694 TTTAGTTCTAGATACACCCCTTTTTG 57.142 34.615 0.00 0.00 0.00 2.44
636 667 9.275572 TGTATTTTAGTTCTAGATACACCCCTT 57.724 33.333 0.00 0.00 30.60 3.95
637 668 8.849543 TGTATTTTAGTTCTAGATACACCCCT 57.150 34.615 0.00 0.00 30.60 4.79
638 669 9.708092 GATGTATTTTAGTTCTAGATACACCCC 57.292 37.037 14.34 8.08 36.40 4.95
655 686 9.901172 AGAAGGGAACGTATTTAGATGTATTTT 57.099 29.630 0.00 0.00 0.00 1.82
685 716 9.976255 CGTCCGAAAATACTTGTCATTAAAATA 57.024 29.630 0.00 0.00 0.00 1.40
686 717 7.966204 CCGTCCGAAAATACTTGTCATTAAAAT 59.034 33.333 0.00 0.00 0.00 1.82
687 718 7.172875 TCCGTCCGAAAATACTTGTCATTAAAA 59.827 33.333 0.00 0.00 0.00 1.52
688 719 6.649973 TCCGTCCGAAAATACTTGTCATTAAA 59.350 34.615 0.00 0.00 0.00 1.52
689 720 6.164876 TCCGTCCGAAAATACTTGTCATTAA 58.835 36.000 0.00 0.00 0.00 1.40
690 721 5.722263 TCCGTCCGAAAATACTTGTCATTA 58.278 37.500 0.00 0.00 0.00 1.90
691 722 4.571919 TCCGTCCGAAAATACTTGTCATT 58.428 39.130 0.00 0.00 0.00 2.57
692 723 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
693 724 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
694 725 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
695 726 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
696 727 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
697 728 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
698 729 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
699 730 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
700 731 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
701 732 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
702 733 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
703 734 1.856629 AATACTCCCTCCGTCCGAAA 58.143 50.000 0.00 0.00 0.00 3.46
704 735 1.753073 GAAATACTCCCTCCGTCCGAA 59.247 52.381 0.00 0.00 0.00 4.30
705 736 1.396653 GAAATACTCCCTCCGTCCGA 58.603 55.000 0.00 0.00 0.00 4.55
706 737 0.030369 CGAAATACTCCCTCCGTCCG 59.970 60.000 0.00 0.00 0.00 4.79
707 738 0.388294 CCGAAATACTCCCTCCGTCC 59.612 60.000 0.00 0.00 0.00 4.79
708 739 1.396653 TCCGAAATACTCCCTCCGTC 58.603 55.000 0.00 0.00 0.00 4.79
709 740 1.479730 GTTCCGAAATACTCCCTCCGT 59.520 52.381 0.00 0.00 0.00 4.69
710 741 1.755380 AGTTCCGAAATACTCCCTCCG 59.245 52.381 0.00 0.00 0.00 4.63
711 742 3.055312 ACAAGTTCCGAAATACTCCCTCC 60.055 47.826 0.00 0.00 0.00 4.30
712 743 4.182339 GACAAGTTCCGAAATACTCCCTC 58.818 47.826 0.00 0.00 0.00 4.30
713 744 3.055312 GGACAAGTTCCGAAATACTCCCT 60.055 47.826 0.00 0.00 33.46 4.20
714 745 3.268330 GGACAAGTTCCGAAATACTCCC 58.732 50.000 0.00 0.00 33.46 4.30
726 757 4.204799 ACCCACTTACTTTGGACAAGTTC 58.795 43.478 0.00 0.00 36.02 3.01
766 802 4.825085 TGCGAAGGTTTCATTTCTTTAGGT 59.175 37.500 0.00 0.00 0.00 3.08
934 976 1.271707 GGTTTGGAAGGACGGGATTGA 60.272 52.381 0.00 0.00 0.00 2.57
1101 1143 3.435186 GGCTTCTTGGAGTGGCGC 61.435 66.667 0.00 0.00 0.00 6.53
1584 1626 7.475299 ACAACCCTCCAAGAAAGGAAATATAA 58.525 34.615 0.00 0.00 37.20 0.98
1769 1814 4.843728 TCACCTAAAATACCCAGCAGAAG 58.156 43.478 0.00 0.00 0.00 2.85
1781 1826 2.649816 AGCCCCAGAGTTCACCTAAAAT 59.350 45.455 0.00 0.00 0.00 1.82
1790 1835 1.220477 GAGCAGAGCCCCAGAGTTC 59.780 63.158 0.00 0.00 0.00 3.01
1860 1905 0.321564 CGTCCTGAGAATTGCCACCA 60.322 55.000 0.00 0.00 0.00 4.17
1879 1925 1.669999 ATCAAAGATTGCAGCCGCCC 61.670 55.000 0.00 0.00 37.32 6.13
1933 1979 1.742761 ATGACAGTGCTCGAAATGGG 58.257 50.000 0.00 0.00 0.00 4.00
2040 2086 8.474025 TCAAATACAAGCAAAGGGGTAATAATG 58.526 33.333 0.00 0.00 0.00 1.90
2619 2824 3.802948 ATAAGAACACCTAGACGCTGG 57.197 47.619 0.00 0.00 0.00 4.85
2650 2855 4.533311 ACAAATCAGCTTCAAAATCCCCAT 59.467 37.500 0.00 0.00 0.00 4.00
2730 2937 2.421529 CCTGATAACCTTGGTAGGGTGC 60.422 54.545 0.00 0.00 43.07 5.01
2779 2986 5.422214 AATCTTGTATCGACCAGTTCCTT 57.578 39.130 0.00 0.00 0.00 3.36
2852 3059 6.040391 ACTTTGCCTGCATTTACAAGTTTCTA 59.960 34.615 0.00 0.00 0.00 2.10
2940 3147 2.956333 GTGTAAACCCTTCACCAAAGCT 59.044 45.455 0.00 0.00 33.29 3.74
3112 3319 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
3113 3320 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
3114 3321 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
3115 3322 8.422566 AGAAAGACTTATATTTAGGAACGGAGG 58.577 37.037 0.00 0.00 0.00 4.30
3142 3349 9.698309 CCGTATGTAGTTCATATTGAAATCTCT 57.302 33.333 0.00 0.00 38.22 3.10
3143 3350 9.692749 TCCGTATGTAGTTCATATTGAAATCTC 57.307 33.333 0.00 0.00 38.22 2.75
3146 3353 9.778741 ACATCCGTATGTAGTTCATATTGAAAT 57.221 29.630 0.00 0.00 44.66 2.17
3165 3372 9.149225 CTCTAAACTACGTCTATATACATCCGT 57.851 37.037 0.00 0.00 0.00 4.69
3166 3373 9.149225 ACTCTAAACTACGTCTATATACATCCG 57.851 37.037 0.00 0.00 0.00 4.18
3175 3382 9.610705 TGAATCTACACTCTAAACTACGTCTAT 57.389 33.333 0.00 0.00 0.00 1.98
3176 3383 8.877779 GTGAATCTACACTCTAAACTACGTCTA 58.122 37.037 0.00 0.00 37.73 2.59
3177 3384 7.607223 AGTGAATCTACACTCTAAACTACGTCT 59.393 37.037 0.00 0.00 46.36 4.18
3178 3385 7.750769 AGTGAATCTACACTCTAAACTACGTC 58.249 38.462 0.00 0.00 46.36 4.34
3179 3386 7.684937 AGTGAATCTACACTCTAAACTACGT 57.315 36.000 0.00 0.00 46.36 3.57
3191 3398 5.412594 TGGAGCAAAATGAGTGAATCTACAC 59.587 40.000 0.00 0.00 40.60 2.90
3192 3399 5.559770 TGGAGCAAAATGAGTGAATCTACA 58.440 37.500 0.00 0.00 0.00 2.74
3193 3400 6.690194 ATGGAGCAAAATGAGTGAATCTAC 57.310 37.500 0.00 0.00 0.00 2.59
3194 3401 7.994911 ACATATGGAGCAAAATGAGTGAATCTA 59.005 33.333 7.80 0.00 0.00 1.98
3195 3402 6.832384 ACATATGGAGCAAAATGAGTGAATCT 59.168 34.615 7.80 0.00 0.00 2.40
3196 3403 7.035840 ACATATGGAGCAAAATGAGTGAATC 57.964 36.000 7.80 0.00 0.00 2.52
3197 3404 7.776969 ACTACATATGGAGCAAAATGAGTGAAT 59.223 33.333 15.30 0.00 0.00 2.57
3198 3405 7.112122 ACTACATATGGAGCAAAATGAGTGAA 58.888 34.615 15.30 0.00 0.00 3.18
3199 3406 6.653020 ACTACATATGGAGCAAAATGAGTGA 58.347 36.000 15.30 0.00 0.00 3.41
3200 3407 6.765036 AGACTACATATGGAGCAAAATGAGTG 59.235 38.462 15.30 0.00 0.00 3.51
3201 3408 6.893583 AGACTACATATGGAGCAAAATGAGT 58.106 36.000 15.30 0.00 0.00 3.41
3241 3448 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
3242 3449 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
3243 3450 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
3244 3451 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
3245 3452 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
3246 3453 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
3247 3454 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
3248 3455 8.731591 AATACTCCCTCCGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
3250 3457 8.912614 ATAATACTCCCTCCGTTCCTAAATAT 57.087 34.615 0.00 0.00 0.00 1.28
3251 3458 8.175431 AGATAATACTCCCTCCGTTCCTAAATA 58.825 37.037 0.00 0.00 0.00 1.40
3252 3459 7.017531 AGATAATACTCCCTCCGTTCCTAAAT 58.982 38.462 0.00 0.00 0.00 1.40
3253 3460 6.379579 AGATAATACTCCCTCCGTTCCTAAA 58.620 40.000 0.00 0.00 0.00 1.85
3254 3461 5.961897 AGATAATACTCCCTCCGTTCCTAA 58.038 41.667 0.00 0.00 0.00 2.69
3255 3462 5.595814 AGATAATACTCCCTCCGTTCCTA 57.404 43.478 0.00 0.00 0.00 2.94
3256 3463 4.472690 AGATAATACTCCCTCCGTTCCT 57.527 45.455 0.00 0.00 0.00 3.36
3257 3464 6.661304 TTAAGATAATACTCCCTCCGTTCC 57.339 41.667 0.00 0.00 0.00 3.62
3258 3465 7.652507 CAGTTTAAGATAATACTCCCTCCGTTC 59.347 40.741 0.00 0.00 0.00 3.95
3259 3466 7.343833 TCAGTTTAAGATAATACTCCCTCCGTT 59.656 37.037 0.00 0.00 0.00 4.44
3260 3467 6.837568 TCAGTTTAAGATAATACTCCCTCCGT 59.162 38.462 0.00 0.00 0.00 4.69
3261 3468 7.286215 TCAGTTTAAGATAATACTCCCTCCG 57.714 40.000 0.00 0.00 0.00 4.63
3287 3494 9.500785 AAAACCATTCCAAAATGAAAATACGAT 57.499 25.926 0.00 0.00 44.25 3.73
3288 3495 8.894768 AAAACCATTCCAAAATGAAAATACGA 57.105 26.923 0.00 0.00 44.25 3.43
3645 3853 2.877866 TCCTTAATCCACCCGCAAAAA 58.122 42.857 0.00 0.00 0.00 1.94
3646 3854 2.588464 TCCTTAATCCACCCGCAAAA 57.412 45.000 0.00 0.00 0.00 2.44
3647 3855 2.588464 TTCCTTAATCCACCCGCAAA 57.412 45.000 0.00 0.00 0.00 3.68
3648 3856 2.588464 TTTCCTTAATCCACCCGCAA 57.412 45.000 0.00 0.00 0.00 4.85
3649 3857 2.588464 TTTTCCTTAATCCACCCGCA 57.412 45.000 0.00 0.00 0.00 5.69
3650 3858 3.194755 ACAATTTTCCTTAATCCACCCGC 59.805 43.478 0.00 0.00 0.00 6.13
3651 3859 4.461081 TCACAATTTTCCTTAATCCACCCG 59.539 41.667 0.00 0.00 0.00 5.28
3652 3860 5.993748 TCACAATTTTCCTTAATCCACCC 57.006 39.130 0.00 0.00 0.00 4.61
3653 3861 6.754193 TGTTCACAATTTTCCTTAATCCACC 58.246 36.000 0.00 0.00 0.00 4.61
3654 3862 7.095649 GCTTGTTCACAATTTTCCTTAATCCAC 60.096 37.037 0.00 0.00 35.02 4.02
3655 3863 6.928492 GCTTGTTCACAATTTTCCTTAATCCA 59.072 34.615 0.00 0.00 35.02 3.41
3656 3864 6.928492 TGCTTGTTCACAATTTTCCTTAATCC 59.072 34.615 0.00 0.00 35.02 3.01
3657 3865 7.945033 TGCTTGTTCACAATTTTCCTTAATC 57.055 32.000 0.00 0.00 35.02 1.75
3658 3866 7.986889 AGTTGCTTGTTCACAATTTTCCTTAAT 59.013 29.630 0.00 0.00 35.02 1.40
3659 3867 7.327214 AGTTGCTTGTTCACAATTTTCCTTAA 58.673 30.769 0.00 0.00 35.02 1.85
3660 3868 6.872920 AGTTGCTTGTTCACAATTTTCCTTA 58.127 32.000 0.00 0.00 35.02 2.69
3661 3869 5.733676 AGTTGCTTGTTCACAATTTTCCTT 58.266 33.333 0.00 0.00 35.02 3.36
3662 3870 5.343307 AGTTGCTTGTTCACAATTTTCCT 57.657 34.783 0.00 0.00 35.02 3.36
3663 3871 6.146021 CCATAGTTGCTTGTTCACAATTTTCC 59.854 38.462 0.00 0.00 35.02 3.13
3664 3872 6.701400 ACCATAGTTGCTTGTTCACAATTTTC 59.299 34.615 0.00 0.00 35.02 2.29
3665 3873 6.581712 ACCATAGTTGCTTGTTCACAATTTT 58.418 32.000 0.00 0.00 35.02 1.82
3666 3874 6.160576 ACCATAGTTGCTTGTTCACAATTT 57.839 33.333 0.00 0.00 35.02 1.82
3672 3880 4.754618 CACTGTACCATAGTTGCTTGTTCA 59.245 41.667 0.00 0.00 0.00 3.18
3702 3910 3.002862 GTGTGTCAATGGCTTGTTTACGA 59.997 43.478 0.00 0.00 33.87 3.43
3703 3911 3.242903 TGTGTGTCAATGGCTTGTTTACG 60.243 43.478 0.00 0.00 33.87 3.18
3705 3913 6.641169 TTATGTGTGTCAATGGCTTGTTTA 57.359 33.333 0.00 0.00 33.87 2.01
3706 3914 5.528043 TTATGTGTGTCAATGGCTTGTTT 57.472 34.783 0.00 0.00 33.87 2.83
3709 3917 5.571784 AGATTATGTGTGTCAATGGCTTG 57.428 39.130 0.00 0.00 0.00 4.01
3710 3918 6.015180 ACAAAGATTATGTGTGTCAATGGCTT 60.015 34.615 0.00 0.00 0.00 4.35
3829 4062 8.147058 AGAAGATACAGGTAATGCATGACTTAG 58.853 37.037 14.06 6.80 32.48 2.18
3894 4130 1.133009 AGACCTGACCTTGTCTCCTGT 60.133 52.381 0.00 0.00 37.24 4.00
3917 4153 3.806521 GTGTTGCCAGCTCTAGATACATG 59.193 47.826 0.00 0.00 0.00 3.21
3995 4231 4.481112 CGTTGGGCAATCGCAGGC 62.481 66.667 0.00 0.00 41.24 4.85
4048 4284 2.481795 GCTCATCTTCTGGCAGAGAGAC 60.482 54.545 26.61 17.22 30.18 3.36
4115 4351 3.120304 GCCTTGGAAACGATGTAGTCAAC 60.120 47.826 0.00 0.00 0.00 3.18
4127 4363 2.477972 GAAGCGCCTGCCTTGGAAAC 62.478 60.000 2.29 0.00 44.31 2.78
4247 4613 1.226128 GCATTCCGCTGCTTCGAAC 60.226 57.895 0.00 0.00 39.12 3.95
4400 4768 7.600065 AGAGCGTTTGAATCACTAAAGTAGTA 58.400 34.615 0.00 0.00 37.23 1.82
4465 4833 4.683832 CTGTGGTACAGCACTATACCTTC 58.316 47.826 12.33 1.52 41.80 3.46
4528 4907 7.065120 TCAACATTTCCTCAATCACCAAAAT 57.935 32.000 0.00 0.00 0.00 1.82
4557 4936 5.302360 AGCCCATTTGCAAGCATATTATTG 58.698 37.500 10.59 0.00 0.00 1.90
4577 4956 6.457528 GCAGTTCTATTGACAAGACATAAGCC 60.458 42.308 0.00 0.00 0.00 4.35
4600 4979 2.429250 CCAAATCTTGCTCATCATGGCA 59.571 45.455 0.00 0.00 36.62 4.92
4623 5003 0.109597 GGCACGCTTCTCCAACATTG 60.110 55.000 0.00 0.00 0.00 2.82
4663 5043 6.183360 CCATAAATTCCCTTCCCATTGTACAC 60.183 42.308 0.00 0.00 0.00 2.90
4664 5044 5.896678 CCATAAATTCCCTTCCCATTGTACA 59.103 40.000 0.00 0.00 0.00 2.90
4665 5045 5.221441 GCCATAAATTCCCTTCCCATTGTAC 60.221 44.000 0.00 0.00 0.00 2.90
4666 5046 4.898861 GCCATAAATTCCCTTCCCATTGTA 59.101 41.667 0.00 0.00 0.00 2.41
4667 5047 3.711190 GCCATAAATTCCCTTCCCATTGT 59.289 43.478 0.00 0.00 0.00 2.71
4669 5049 4.078395 AGAGCCATAAATTCCCTTCCCATT 60.078 41.667 0.00 0.00 0.00 3.16
4670 5050 3.468625 AGAGCCATAAATTCCCTTCCCAT 59.531 43.478 0.00 0.00 0.00 4.00
4671 5051 2.858768 AGAGCCATAAATTCCCTTCCCA 59.141 45.455 0.00 0.00 0.00 4.37
4672 5052 3.117512 TGAGAGCCATAAATTCCCTTCCC 60.118 47.826 0.00 0.00 0.00 3.97
4673 5053 4.140536 CTGAGAGCCATAAATTCCCTTCC 58.859 47.826 0.00 0.00 0.00 3.46
4674 5054 4.140536 CCTGAGAGCCATAAATTCCCTTC 58.859 47.826 0.00 0.00 0.00 3.46
4699 5079 8.766994 ATTATTTTGTGCATATAGGGTTCACT 57.233 30.769 0.00 0.00 0.00 3.41
4700 5080 9.816354 AAATTATTTTGTGCATATAGGGTTCAC 57.184 29.630 0.00 0.00 0.00 3.18
4751 5132 9.696917 GATCACATCTGTTTCCAAATTAGTTTT 57.303 29.630 0.00 0.00 0.00 2.43
4757 5138 7.294017 ACTTGATCACATCTGTTTCCAAATT 57.706 32.000 0.00 0.00 0.00 1.82
4758 5139 6.906157 ACTTGATCACATCTGTTTCCAAAT 57.094 33.333 0.00 0.00 0.00 2.32
4782 5163 8.634444 TGGCAAAACTTTGTATACAAGTACAAT 58.366 29.630 17.36 2.91 42.35 2.71
4783 5164 7.997482 TGGCAAAACTTTGTATACAAGTACAA 58.003 30.769 17.36 2.89 41.44 2.41
4804 5185 4.922206 ACTATTGAAGTCATTCCTTGGCA 58.078 39.130 0.00 0.00 30.33 4.92
4860 5241 8.575589 TGACAAATAGCATGAACAACTTGTAAT 58.424 29.630 0.00 0.00 0.00 1.89
4861 5242 7.935520 TGACAAATAGCATGAACAACTTGTAA 58.064 30.769 0.00 0.00 0.00 2.41
4862 5243 7.503521 TGACAAATAGCATGAACAACTTGTA 57.496 32.000 0.00 0.00 0.00 2.41
4863 5244 6.389830 TGACAAATAGCATGAACAACTTGT 57.610 33.333 0.00 0.00 0.00 3.16
4864 5245 7.383029 ACAATGACAAATAGCATGAACAACTTG 59.617 33.333 0.00 0.00 0.00 3.16
4865 5246 7.436118 ACAATGACAAATAGCATGAACAACTT 58.564 30.769 0.00 0.00 0.00 2.66
4866 5247 6.985117 ACAATGACAAATAGCATGAACAACT 58.015 32.000 0.00 0.00 0.00 3.16
4867 5248 7.642071 AACAATGACAAATAGCATGAACAAC 57.358 32.000 0.00 0.00 0.00 3.32
4868 5249 8.659925 AAAACAATGACAAATAGCATGAACAA 57.340 26.923 0.00 0.00 0.00 2.83
4869 5250 8.659925 AAAAACAATGACAAATAGCATGAACA 57.340 26.923 0.00 0.00 0.00 3.18
4892 5273 7.159322 TGTATATAGCGGGCAAAAAGAAAAA 57.841 32.000 0.00 0.00 0.00 1.94
4893 5274 6.761099 TGTATATAGCGGGCAAAAAGAAAA 57.239 33.333 0.00 0.00 0.00 2.29
4894 5275 6.376018 ACTTGTATATAGCGGGCAAAAAGAAA 59.624 34.615 0.00 0.00 0.00 2.52
4895 5276 5.883673 ACTTGTATATAGCGGGCAAAAAGAA 59.116 36.000 0.00 0.00 0.00 2.52
4896 5277 5.433526 ACTTGTATATAGCGGGCAAAAAGA 58.566 37.500 0.00 0.00 0.00 2.52
4897 5278 5.751243 ACTTGTATATAGCGGGCAAAAAG 57.249 39.130 0.00 0.00 0.00 2.27
4898 5279 5.416326 ACAACTTGTATATAGCGGGCAAAAA 59.584 36.000 0.00 0.00 0.00 1.94
4899 5280 4.944930 ACAACTTGTATATAGCGGGCAAAA 59.055 37.500 0.00 0.00 0.00 2.44
4900 5281 4.519213 ACAACTTGTATATAGCGGGCAAA 58.481 39.130 0.00 0.00 0.00 3.68
4901 5282 4.145365 ACAACTTGTATATAGCGGGCAA 57.855 40.909 0.00 0.00 0.00 4.52
4902 5283 3.830744 ACAACTTGTATATAGCGGGCA 57.169 42.857 0.00 0.00 0.00 5.36
4903 5284 4.624015 TGTACAACTTGTATATAGCGGGC 58.376 43.478 4.93 0.00 35.05 6.13
4904 5285 5.120208 GCATGTACAACTTGTATATAGCGGG 59.880 44.000 10.00 1.44 33.29 6.13
4905 5286 5.926542 AGCATGTACAACTTGTATATAGCGG 59.073 40.000 10.00 1.73 33.29 5.52
4906 5287 8.689251 ATAGCATGTACAACTTGTATATAGCG 57.311 34.615 10.00 2.01 33.29 4.26
4911 5292 9.104965 GGACAAATAGCATGTACAACTTGTATA 57.895 33.333 0.00 3.05 35.05 1.47
4912 5293 7.829211 AGGACAAATAGCATGTACAACTTGTAT 59.171 33.333 0.00 0.00 35.05 2.29
4913 5294 7.165485 AGGACAAATAGCATGTACAACTTGTA 58.835 34.615 0.00 0.00 33.88 2.41
4914 5295 6.003950 AGGACAAATAGCATGTACAACTTGT 58.996 36.000 0.00 2.38 33.88 3.16
4915 5296 6.500684 AGGACAAATAGCATGTACAACTTG 57.499 37.500 0.00 0.00 33.88 3.16
4916 5297 7.524717 AAAGGACAAATAGCATGTACAACTT 57.475 32.000 0.00 0.00 33.88 2.66
4917 5298 7.524717 AAAAGGACAAATAGCATGTACAACT 57.475 32.000 0.00 3.09 33.88 3.16
4943 5324 4.223923 TGACTTCAGGGCAAAAAGGAAAAA 59.776 37.500 0.00 0.00 0.00 1.94
4944 5325 3.772025 TGACTTCAGGGCAAAAAGGAAAA 59.228 39.130 0.00 0.00 0.00 2.29
4945 5326 3.370104 TGACTTCAGGGCAAAAAGGAAA 58.630 40.909 0.00 0.00 0.00 3.13
4946 5327 3.025322 TGACTTCAGGGCAAAAAGGAA 57.975 42.857 0.00 0.00 0.00 3.36
4947 5328 2.746279 TGACTTCAGGGCAAAAAGGA 57.254 45.000 0.00 0.00 0.00 3.36
4954 5335 2.655090 TTCACATTGACTTCAGGGCA 57.345 45.000 0.00 0.00 0.00 5.36
4955 5336 5.841957 ATAATTCACATTGACTTCAGGGC 57.158 39.130 0.00 0.00 0.00 5.19
4956 5337 8.059798 AGAAATAATTCACATTGACTTCAGGG 57.940 34.615 0.00 0.00 38.06 4.45
4957 5338 9.350357 CAAGAAATAATTCACATTGACTTCAGG 57.650 33.333 0.00 0.00 38.06 3.86
4958 5339 9.350357 CCAAGAAATAATTCACATTGACTTCAG 57.650 33.333 0.00 0.00 38.06 3.02
4959 5340 7.814107 GCCAAGAAATAATTCACATTGACTTCA 59.186 33.333 0.00 0.00 38.06 3.02
4960 5341 7.814107 TGCCAAGAAATAATTCACATTGACTTC 59.186 33.333 0.00 0.00 38.06 3.01
4961 5342 7.669427 TGCCAAGAAATAATTCACATTGACTT 58.331 30.769 0.00 0.00 38.06 3.01
4962 5343 7.230849 TGCCAAGAAATAATTCACATTGACT 57.769 32.000 0.00 0.00 38.06 3.41
4963 5344 7.887996 TTGCCAAGAAATAATTCACATTGAC 57.112 32.000 0.00 0.00 38.06 3.18
4964 5345 8.772705 GTTTTGCCAAGAAATAATTCACATTGA 58.227 29.630 0.00 0.00 38.06 2.57
4965 5346 8.776470 AGTTTTGCCAAGAAATAATTCACATTG 58.224 29.630 0.00 0.00 38.06 2.82
4966 5347 8.907222 AGTTTTGCCAAGAAATAATTCACATT 57.093 26.923 0.00 0.00 38.06 2.71
4967 5348 8.907222 AAGTTTTGCCAAGAAATAATTCACAT 57.093 26.923 0.00 0.00 38.06 3.21
4968 5349 8.729805 AAAGTTTTGCCAAGAAATAATTCACA 57.270 26.923 0.00 0.00 38.06 3.58
4974 5355 8.596380 CGTGTAAAAAGTTTTGCCAAGAAATAA 58.404 29.630 0.61 0.00 32.72 1.40
4975 5356 7.974501 TCGTGTAAAAAGTTTTGCCAAGAAATA 59.025 29.630 0.61 0.00 32.72 1.40
4976 5357 6.814146 TCGTGTAAAAAGTTTTGCCAAGAAAT 59.186 30.769 0.61 0.00 32.72 2.17
4977 5358 6.157211 TCGTGTAAAAAGTTTTGCCAAGAAA 58.843 32.000 0.61 0.00 32.72 2.52
4978 5359 5.710984 TCGTGTAAAAAGTTTTGCCAAGAA 58.289 33.333 0.61 0.00 32.72 2.52
4979 5360 5.106078 ACTCGTGTAAAAAGTTTTGCCAAGA 60.106 36.000 0.61 8.37 32.72 3.02
4980 5361 5.099575 ACTCGTGTAAAAAGTTTTGCCAAG 58.900 37.500 0.61 4.67 32.72 3.61
4981 5362 5.061920 ACTCGTGTAAAAAGTTTTGCCAA 57.938 34.783 0.61 0.00 32.72 4.52
4982 5363 4.705337 ACTCGTGTAAAAAGTTTTGCCA 57.295 36.364 0.61 0.00 32.72 4.92
4983 5364 5.096849 TGAACTCGTGTAAAAAGTTTTGCC 58.903 37.500 0.61 0.00 33.54 4.52
4984 5365 6.620253 TTGAACTCGTGTAAAAAGTTTTGC 57.380 33.333 0.61 0.00 33.54 3.68
4985 5366 8.458328 CGTATTGAACTCGTGTAAAAAGTTTTG 58.542 33.333 0.61 0.00 33.54 2.44
4986 5367 8.177013 ACGTATTGAACTCGTGTAAAAAGTTTT 58.823 29.630 0.00 0.00 36.46 2.43
4987 5368 7.637132 CACGTATTGAACTCGTGTAAAAAGTTT 59.363 33.333 13.18 0.00 46.11 2.66
4988 5369 7.121272 CACGTATTGAACTCGTGTAAAAAGTT 58.879 34.615 13.18 0.00 46.11 2.66
4989 5370 6.642917 CACGTATTGAACTCGTGTAAAAAGT 58.357 36.000 13.18 0.00 46.11 2.66
4998 5379 7.491372 ACAAATATGATCACGTATTGAACTCGT 59.509 33.333 15.31 0.00 37.98 4.18
4999 5380 7.841486 ACAAATATGATCACGTATTGAACTCG 58.159 34.615 15.31 0.00 37.98 4.18
5000 5381 9.988350 AAACAAATATGATCACGTATTGAACTC 57.012 29.630 15.31 0.00 37.98 3.01
5001 5382 9.988350 GAAACAAATATGATCACGTATTGAACT 57.012 29.630 15.31 3.81 37.98 3.01
5002 5383 9.221775 GGAAACAAATATGATCACGTATTGAAC 57.778 33.333 15.31 8.34 37.98 3.18
5003 5384 8.951243 TGGAAACAAATATGATCACGTATTGAA 58.049 29.630 15.31 0.00 37.98 2.69
5004 5385 8.499403 TGGAAACAAATATGATCACGTATTGA 57.501 30.769 15.31 0.00 37.98 2.57
5005 5386 8.611757 TCTGGAAACAAATATGATCACGTATTG 58.388 33.333 0.00 4.26 42.06 1.90
5006 5387 8.731275 TCTGGAAACAAATATGATCACGTATT 57.269 30.769 0.00 0.00 42.06 1.89
5007 5388 8.908786 ATCTGGAAACAAATATGATCACGTAT 57.091 30.769 0.00 0.00 42.06 3.06
5008 5389 9.825109 TTATCTGGAAACAAATATGATCACGTA 57.175 29.630 0.00 0.00 42.06 3.57
5009 5390 8.731275 TTATCTGGAAACAAATATGATCACGT 57.269 30.769 0.00 0.00 42.06 4.49
5010 5391 9.045223 TCTTATCTGGAAACAAATATGATCACG 57.955 33.333 0.00 0.00 42.06 4.35
5021 5402 9.965824 GAAAAGTCAAATCTTATCTGGAAACAA 57.034 29.630 0.00 0.00 42.06 2.83
5022 5403 8.289618 CGAAAAGTCAAATCTTATCTGGAAACA 58.710 33.333 0.00 0.00 39.59 2.83
5023 5404 8.290325 ACGAAAAGTCAAATCTTATCTGGAAAC 58.710 33.333 0.00 0.00 0.00 2.78
5024 5405 8.391075 ACGAAAAGTCAAATCTTATCTGGAAA 57.609 30.769 0.00 0.00 0.00 3.13
5025 5406 7.979444 ACGAAAAGTCAAATCTTATCTGGAA 57.021 32.000 0.00 0.00 0.00 3.53
5026 5407 9.098355 CATACGAAAAGTCAAATCTTATCTGGA 57.902 33.333 0.00 0.00 0.00 3.86
5027 5408 9.098355 TCATACGAAAAGTCAAATCTTATCTGG 57.902 33.333 0.00 0.00 0.00 3.86
5028 5409 9.907576 GTCATACGAAAAGTCAAATCTTATCTG 57.092 33.333 0.00 0.00 0.00 2.90
5029 5410 9.877178 AGTCATACGAAAAGTCAAATCTTATCT 57.123 29.630 0.00 0.00 0.00 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.