Multiple sequence alignment - TraesCS2D01G331000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G331000 chr2D 100.000 4871 0 0 1 4871 423442995 423438125 0.000000e+00 8996.0
1 TraesCS2D01G331000 chr2D 91.864 381 31 0 4491 4871 459040742 459041122 2.580000e-147 532.0
2 TraesCS2D01G331000 chr2D 95.177 311 15 0 4179 4489 459040369 459040679 4.380000e-135 492.0
3 TraesCS2D01G331000 chr2D 95.122 82 2 2 4130 4209 423380553 423380472 1.420000e-25 128.0
4 TraesCS2D01G331000 chr2A 96.349 3150 111 4 828 3976 565169072 565172218 0.000000e+00 5177.0
5 TraesCS2D01G331000 chr2B 95.240 3235 144 8 748 3979 496640530 496637303 0.000000e+00 5112.0
6 TraesCS2D01G331000 chr6D 93.077 520 25 4 3980 4489 306200350 306199832 0.000000e+00 750.0
7 TraesCS2D01G331000 chr6D 93.947 380 23 0 4490 4869 306199770 306199391 4.230000e-160 575.0
8 TraesCS2D01G331000 chr6D 84.766 256 14 5 3978 4209 306149392 306149138 2.930000e-57 233.0
9 TraesCS2D01G331000 chr1A 90.152 528 34 5 3978 4489 542907024 542906499 0.000000e+00 671.0
10 TraesCS2D01G331000 chr1A 92.368 380 29 0 4492 4871 542906435 542906056 4.290000e-150 542.0
11 TraesCS2D01G331000 chr1A 91.453 234 17 2 3978 4209 542901633 542901401 7.870000e-83 318.0
12 TraesCS2D01G331000 chr7D 94.241 382 21 1 4490 4871 500802151 500801771 2.530000e-162 582.0
13 TraesCS2D01G331000 chr7D 94.534 311 17 0 4179 4489 500802523 500802213 9.480000e-132 481.0
14 TraesCS2D01G331000 chr7D 92.308 234 15 2 3978 4209 500785579 500785347 3.630000e-86 329.0
15 TraesCS2D01G331000 chr7D 92.913 127 9 0 3980 4106 500802711 500802585 8.330000e-43 185.0
16 TraesCS2D01G331000 chr7D 85.981 107 12 2 4098 4202 633052412 633052517 1.430000e-20 111.0
17 TraesCS2D01G331000 chr7D 93.846 65 2 1 4140 4202 500802587 500802523 4.010000e-16 97.1
18 TraesCS2D01G331000 chr5D 92.408 382 29 0 4490 4871 123942510 123942129 3.320000e-151 545.0
19 TraesCS2D01G331000 chr5D 80.374 107 17 4 378 480 541530431 541530537 1.450000e-10 78.7
20 TraesCS2D01G331000 chr3D 92.147 382 30 0 4490 4871 550312626 550313007 1.540000e-149 540.0
21 TraesCS2D01G331000 chr3D 91.099 382 32 1 4490 4871 260979373 260978994 2.600000e-142 516.0
22 TraesCS2D01G331000 chr3D 95.177 311 14 1 4179 4489 260979744 260979435 1.580000e-134 490.0
23 TraesCS2D01G331000 chr4D 91.885 382 31 0 4490 4871 297365940 297365559 7.180000e-148 534.0
24 TraesCS2D01G331000 chr4D 95.177 311 15 0 4179 4489 297366311 297366001 4.380000e-135 492.0
25 TraesCS2D01G331000 chr5A 91.601 381 30 1 4491 4871 246813948 246813570 4.320000e-145 525.0
26 TraesCS2D01G331000 chr5A 94.855 311 14 1 4179 4489 246814319 246814011 7.330000e-133 484.0
27 TraesCS2D01G331000 chr5A 83.784 74 8 2 745 817 602140848 602140778 3.150000e-07 67.6
28 TraesCS2D01G331000 chr6B 95.177 311 15 0 4179 4489 465301680 465301370 4.380000e-135 492.0
29 TraesCS2D01G331000 chr6B 95.177 311 15 0 4179 4489 465326313 465326003 4.380000e-135 492.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G331000 chr2D 423438125 423442995 4870 True 8996.000 8996 100.0000 1 4871 1 chr2D.!!$R2 4870
1 TraesCS2D01G331000 chr2D 459040369 459041122 753 False 512.000 532 93.5205 4179 4871 2 chr2D.!!$F1 692
2 TraesCS2D01G331000 chr2A 565169072 565172218 3146 False 5177.000 5177 96.3490 828 3976 1 chr2A.!!$F1 3148
3 TraesCS2D01G331000 chr2B 496637303 496640530 3227 True 5112.000 5112 95.2400 748 3979 1 chr2B.!!$R1 3231
4 TraesCS2D01G331000 chr6D 306199391 306200350 959 True 662.500 750 93.5120 3980 4869 2 chr6D.!!$R2 889
5 TraesCS2D01G331000 chr1A 542906056 542907024 968 True 606.500 671 91.2600 3978 4871 2 chr1A.!!$R2 893
6 TraesCS2D01G331000 chr7D 500801771 500802711 940 True 336.275 582 93.8835 3980 4871 4 chr7D.!!$R2 891
7 TraesCS2D01G331000 chr3D 260978994 260979744 750 True 503.000 516 93.1380 4179 4871 2 chr3D.!!$R1 692
8 TraesCS2D01G331000 chr4D 297365559 297366311 752 True 513.000 534 93.5310 4179 4871 2 chr4D.!!$R1 692
9 TraesCS2D01G331000 chr5A 246813570 246814319 749 True 504.500 525 93.2280 4179 4871 2 chr5A.!!$R2 692

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
476 477 0.029567 CCGACGTCTCCACTGCTATC 59.970 60.0 14.70 0.0 0.0 2.08 F
477 478 0.029567 CGACGTCTCCACTGCTATCC 59.970 60.0 14.70 0.0 0.0 2.59 F
516 517 0.179045 GATCCCAACCATCTCCACCG 60.179 60.0 0.00 0.0 0.0 4.94 F
2148 2153 0.244721 GTTTTCAGCCTGACCATGCC 59.755 55.0 0.00 0.0 0.0 4.40 F
3705 3710 0.392706 TTGGTCTGATCAGCACACGT 59.607 50.0 18.36 0.0 0.0 4.49 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2386 2391 0.178967 TCCAGTGCCTCAAAATGCCA 60.179 50.0 0.00 0.0 0.00 4.92 R
2387 2392 0.968405 TTCCAGTGCCTCAAAATGCC 59.032 50.0 0.00 0.0 0.00 4.40 R
2499 2504 0.754472 AATGCAGTTGCTTTGCCAGT 59.246 45.0 5.62 0.0 40.81 4.00 R
3852 3857 0.179234 TTCACCAGAAGTCGCCACAA 59.821 50.0 0.00 0.0 0.00 3.33 R
4797 4904 0.738389 ACAGAAGTTTTGTGGGTGCG 59.262 50.0 0.00 0.0 0.00 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.696281 AATTGGCAAACAAAAAGCTGC 57.304 38.095 3.01 0.00 43.46 5.25
24 25 2.673976 GCAAACAAAAAGCTGCCATG 57.326 45.000 0.00 0.00 0.00 3.66
25 26 1.941975 GCAAACAAAAAGCTGCCATGT 59.058 42.857 0.00 0.00 0.00 3.21
26 27 3.129871 GCAAACAAAAAGCTGCCATGTA 58.870 40.909 0.00 0.00 0.00 2.29
27 28 3.184986 GCAAACAAAAAGCTGCCATGTAG 59.815 43.478 0.00 0.00 0.00 2.74
28 29 3.665745 AACAAAAAGCTGCCATGTAGG 57.334 42.857 0.00 0.00 41.84 3.18
29 30 2.597455 ACAAAAAGCTGCCATGTAGGT 58.403 42.857 0.00 0.00 40.61 3.08
30 31 3.761897 ACAAAAAGCTGCCATGTAGGTA 58.238 40.909 0.00 0.00 40.61 3.08
38 39 3.805207 CTGCCATGTAGGTAGGTTAACC 58.195 50.000 17.41 17.41 45.51 2.85
53 54 6.014771 AGGTTAACCTGTCTTTTTCTTCCT 57.985 37.500 26.57 0.00 46.55 3.36
54 55 6.062749 AGGTTAACCTGTCTTTTTCTTCCTC 58.937 40.000 26.57 0.00 46.55 3.71
55 56 5.241064 GGTTAACCTGTCTTTTTCTTCCTCC 59.759 44.000 17.83 0.00 0.00 4.30
56 57 4.519906 AACCTGTCTTTTTCTTCCTCCA 57.480 40.909 0.00 0.00 0.00 3.86
57 58 3.821748 ACCTGTCTTTTTCTTCCTCCAC 58.178 45.455 0.00 0.00 0.00 4.02
58 59 3.202151 ACCTGTCTTTTTCTTCCTCCACA 59.798 43.478 0.00 0.00 0.00 4.17
59 60 3.817647 CCTGTCTTTTTCTTCCTCCACAG 59.182 47.826 0.00 0.00 0.00 3.66
60 61 3.817647 CTGTCTTTTTCTTCCTCCACAGG 59.182 47.826 0.00 0.00 42.01 4.00
61 62 2.554462 GTCTTTTTCTTCCTCCACAGGC 59.446 50.000 0.00 0.00 40.12 4.85
62 63 2.174639 TCTTTTTCTTCCTCCACAGGCA 59.825 45.455 0.00 0.00 40.12 4.75
63 64 2.276732 TTTTCTTCCTCCACAGGCAG 57.723 50.000 0.00 0.00 40.12 4.85
64 65 0.250901 TTTCTTCCTCCACAGGCAGC 60.251 55.000 0.00 0.00 40.12 5.25
65 66 1.418097 TTCTTCCTCCACAGGCAGCA 61.418 55.000 0.00 0.00 40.12 4.41
66 67 1.376942 CTTCCTCCACAGGCAGCAG 60.377 63.158 0.00 0.00 40.12 4.24
67 68 1.834856 CTTCCTCCACAGGCAGCAGA 61.835 60.000 0.00 0.00 40.12 4.26
68 69 1.834856 TTCCTCCACAGGCAGCAGAG 61.835 60.000 0.00 0.00 40.12 3.35
69 70 2.268280 CTCCACAGGCAGCAGAGG 59.732 66.667 0.00 0.00 0.00 3.69
70 71 3.972971 CTCCACAGGCAGCAGAGGC 62.973 68.421 0.00 0.00 41.61 4.70
80 81 4.154347 GCAGAGGCGAGAGGTGGG 62.154 72.222 0.00 0.00 0.00 4.61
81 82 4.154347 CAGAGGCGAGAGGTGGGC 62.154 72.222 0.00 0.00 0.00 5.36
88 89 4.021925 GAGAGGTGGGCGCCTTGT 62.022 66.667 28.56 8.77 39.34 3.16
89 90 2.606519 AGAGGTGGGCGCCTTGTA 60.607 61.111 28.56 7.82 39.34 2.41
90 91 2.436115 GAGGTGGGCGCCTTGTAC 60.436 66.667 28.56 19.14 39.34 2.90
91 92 4.388499 AGGTGGGCGCCTTGTACG 62.388 66.667 28.56 0.00 34.71 3.67
99 100 2.778679 GCCTTGTACGCGAGCTTG 59.221 61.111 15.93 0.00 0.00 4.01
100 101 2.740714 GCCTTGTACGCGAGCTTGG 61.741 63.158 15.93 10.51 0.00 3.61
101 102 2.100631 CCTTGTACGCGAGCTTGGG 61.101 63.158 15.93 16.18 0.00 4.12
102 103 2.740714 CTTGTACGCGAGCTTGGGC 61.741 63.158 15.93 6.61 39.06 5.36
103 104 3.523087 TTGTACGCGAGCTTGGGCA 62.523 57.895 15.93 1.99 41.70 5.36
104 105 3.188786 GTACGCGAGCTTGGGCAG 61.189 66.667 15.93 6.76 41.70 4.85
113 114 4.399395 CTTGGGCAGCTGAGGCGA 62.399 66.667 20.43 0.00 44.37 5.54
114 115 4.704833 TTGGGCAGCTGAGGCGAC 62.705 66.667 20.43 0.00 44.37 5.19
116 117 3.461773 GGGCAGCTGAGGCGACTA 61.462 66.667 20.43 0.00 44.43 2.59
117 118 2.579201 GGCAGCTGAGGCGACTAA 59.421 61.111 20.43 0.00 44.43 2.24
118 119 1.520342 GGCAGCTGAGGCGACTAAG 60.520 63.158 20.43 0.00 44.43 2.18
119 120 1.520342 GCAGCTGAGGCGACTAAGG 60.520 63.158 20.43 0.00 44.43 2.69
120 121 1.520342 CAGCTGAGGCGACTAAGGC 60.520 63.158 8.42 2.92 44.43 4.35
121 122 2.583593 GCTGAGGCGACTAAGGCG 60.584 66.667 4.31 0.00 44.43 5.52
122 123 3.064987 GCTGAGGCGACTAAGGCGA 62.065 63.158 4.31 0.00 44.43 5.54
123 124 1.064946 CTGAGGCGACTAAGGCGAG 59.935 63.158 0.00 0.00 44.43 5.03
124 125 1.658686 CTGAGGCGACTAAGGCGAGT 61.659 60.000 0.00 0.00 44.43 4.18
125 126 1.226717 GAGGCGACTAAGGCGAGTG 60.227 63.158 0.00 0.00 44.43 3.51
126 127 2.202756 GGCGACTAAGGCGAGTGG 60.203 66.667 0.00 0.47 0.00 4.00
127 128 2.202756 GCGACTAAGGCGAGTGGG 60.203 66.667 0.00 0.00 0.00 4.61
128 129 2.494918 CGACTAAGGCGAGTGGGG 59.505 66.667 0.00 0.00 0.00 4.96
129 130 2.187163 GACTAAGGCGAGTGGGGC 59.813 66.667 0.00 0.00 0.00 5.80
130 131 2.606519 ACTAAGGCGAGTGGGGCA 60.607 61.111 0.00 0.00 34.40 5.36
131 132 2.187946 CTAAGGCGAGTGGGGCAG 59.812 66.667 0.00 0.00 34.40 4.85
132 133 4.096003 TAAGGCGAGTGGGGCAGC 62.096 66.667 0.00 0.00 34.40 5.25
138 139 3.640407 GAGTGGGGCAGCCACTGA 61.640 66.667 16.83 0.00 46.81 3.41
139 140 3.177884 AGTGGGGCAGCCACTGAA 61.178 61.111 16.83 0.00 45.38 3.02
140 141 2.674380 GTGGGGCAGCCACTGAAG 60.674 66.667 16.83 0.00 35.53 3.02
141 142 3.970410 TGGGGCAGCCACTGAAGG 61.970 66.667 16.83 0.00 32.44 3.46
142 143 3.971702 GGGGCAGCCACTGAAGGT 61.972 66.667 15.19 0.00 32.44 3.50
143 144 2.360475 GGGCAGCCACTGAAGGTC 60.360 66.667 15.19 0.00 32.44 3.85
144 145 2.753029 GGCAGCCACTGAAGGTCT 59.247 61.111 6.55 0.00 32.44 3.85
145 146 1.673665 GGCAGCCACTGAAGGTCTG 60.674 63.158 6.55 0.00 36.51 3.51
146 147 1.673665 GCAGCCACTGAAGGTCTGG 60.674 63.158 0.00 0.00 35.05 3.86
147 148 2.061220 CAGCCACTGAAGGTCTGGA 58.939 57.895 0.00 0.00 32.44 3.86
148 149 0.036577 CAGCCACTGAAGGTCTGGAG 60.037 60.000 0.00 0.00 32.44 3.86
149 150 1.197430 AGCCACTGAAGGTCTGGAGG 61.197 60.000 0.00 0.00 0.00 4.30
150 151 1.194781 GCCACTGAAGGTCTGGAGGA 61.195 60.000 0.00 0.00 0.00 3.71
151 152 0.901124 CCACTGAAGGTCTGGAGGAG 59.099 60.000 0.00 0.00 0.00 3.69
152 153 1.551099 CCACTGAAGGTCTGGAGGAGA 60.551 57.143 0.00 0.00 0.00 3.71
153 154 2.465813 CACTGAAGGTCTGGAGGAGAT 58.534 52.381 0.00 0.00 31.63 2.75
154 155 2.168106 CACTGAAGGTCTGGAGGAGATG 59.832 54.545 0.00 0.00 31.63 2.90
155 156 1.761784 CTGAAGGTCTGGAGGAGATGG 59.238 57.143 0.00 0.00 31.63 3.51
156 157 1.127343 GAAGGTCTGGAGGAGATGGG 58.873 60.000 0.00 0.00 31.63 4.00
157 158 0.327000 AAGGTCTGGAGGAGATGGGG 60.327 60.000 0.00 0.00 31.63 4.96
158 159 1.768077 GGTCTGGAGGAGATGGGGG 60.768 68.421 0.00 0.00 31.63 5.40
159 160 1.314867 GTCTGGAGGAGATGGGGGA 59.685 63.158 0.00 0.00 31.63 4.81
160 161 0.326618 GTCTGGAGGAGATGGGGGAA 60.327 60.000 0.00 0.00 31.63 3.97
161 162 0.421495 TCTGGAGGAGATGGGGGAAA 59.579 55.000 0.00 0.00 0.00 3.13
162 163 0.842635 CTGGAGGAGATGGGGGAAAG 59.157 60.000 0.00 0.00 0.00 2.62
163 164 1.281925 TGGAGGAGATGGGGGAAAGC 61.282 60.000 0.00 0.00 0.00 3.51
164 165 1.281925 GGAGGAGATGGGGGAAAGCA 61.282 60.000 0.00 0.00 0.00 3.91
165 166 0.182299 GAGGAGATGGGGGAAAGCAG 59.818 60.000 0.00 0.00 0.00 4.24
166 167 1.228510 GGAGATGGGGGAAAGCAGG 59.771 63.158 0.00 0.00 0.00 4.85
167 168 1.575447 GGAGATGGGGGAAAGCAGGT 61.575 60.000 0.00 0.00 0.00 4.00
168 169 0.106967 GAGATGGGGGAAAGCAGGTC 60.107 60.000 0.00 0.00 0.00 3.85
169 170 0.551131 AGATGGGGGAAAGCAGGTCT 60.551 55.000 0.00 0.00 0.00 3.85
170 171 0.394899 GATGGGGGAAAGCAGGTCTG 60.395 60.000 0.00 0.00 0.00 3.51
207 208 4.717313 GGGGGACAACGGCACTCC 62.717 72.222 0.00 0.00 0.00 3.85
208 209 3.637273 GGGGACAACGGCACTCCT 61.637 66.667 0.00 0.00 0.00 3.69
209 210 2.358737 GGGACAACGGCACTCCTG 60.359 66.667 0.00 0.00 0.00 3.86
210 211 2.426023 GGACAACGGCACTCCTGT 59.574 61.111 0.00 0.00 0.00 4.00
211 212 1.961277 GGACAACGGCACTCCTGTG 60.961 63.158 0.00 0.00 46.37 3.66
212 213 1.227556 GACAACGGCACTCCTGTGT 60.228 57.895 0.00 0.00 45.44 3.72
213 214 1.222115 GACAACGGCACTCCTGTGTC 61.222 60.000 0.00 0.00 45.44 3.67
214 215 1.069765 CAACGGCACTCCTGTGTCT 59.930 57.895 0.00 0.00 45.84 3.41
215 216 0.946221 CAACGGCACTCCTGTGTCTC 60.946 60.000 0.00 0.00 45.84 3.36
216 217 1.115930 AACGGCACTCCTGTGTCTCT 61.116 55.000 0.00 0.00 45.84 3.10
217 218 1.214062 CGGCACTCCTGTGTCTCTC 59.786 63.158 0.00 0.00 45.84 3.20
218 219 1.247419 CGGCACTCCTGTGTCTCTCT 61.247 60.000 0.00 0.00 45.84 3.10
219 220 0.530288 GGCACTCCTGTGTCTCTCTC 59.470 60.000 0.00 0.00 44.72 3.20
220 221 1.544724 GCACTCCTGTGTCTCTCTCT 58.455 55.000 0.00 0.00 45.44 3.10
221 222 1.472480 GCACTCCTGTGTCTCTCTCTC 59.528 57.143 0.00 0.00 45.44 3.20
222 223 2.879756 GCACTCCTGTGTCTCTCTCTCT 60.880 54.545 0.00 0.00 45.44 3.10
223 224 3.009723 CACTCCTGTGTCTCTCTCTCTC 58.990 54.545 0.00 0.00 39.24 3.20
224 225 2.912956 ACTCCTGTGTCTCTCTCTCTCT 59.087 50.000 0.00 0.00 0.00 3.10
225 226 3.055094 ACTCCTGTGTCTCTCTCTCTCTC 60.055 52.174 0.00 0.00 0.00 3.20
226 227 2.093711 TCCTGTGTCTCTCTCTCTCTCG 60.094 54.545 0.00 0.00 0.00 4.04
227 228 1.665679 CTGTGTCTCTCTCTCTCTCGC 59.334 57.143 0.00 0.00 0.00 5.03
228 229 1.277842 TGTGTCTCTCTCTCTCTCGCT 59.722 52.381 0.00 0.00 0.00 4.93
229 230 1.933853 GTGTCTCTCTCTCTCTCGCTC 59.066 57.143 0.00 0.00 0.00 5.03
230 231 1.209128 GTCTCTCTCTCTCTCGCTCG 58.791 60.000 0.00 0.00 0.00 5.03
231 232 0.104120 TCTCTCTCTCTCTCGCTCGG 59.896 60.000 0.00 0.00 0.00 4.63
232 233 0.880278 CTCTCTCTCTCTCGCTCGGG 60.880 65.000 0.00 0.00 0.00 5.14
233 234 1.145156 CTCTCTCTCTCGCTCGGGA 59.855 63.158 0.00 0.00 0.00 5.14
234 235 0.880278 CTCTCTCTCTCGCTCGGGAG 60.880 65.000 12.62 12.62 43.79 4.30
235 236 1.891919 CTCTCTCTCGCTCGGGAGG 60.892 68.421 17.86 9.64 42.72 4.30
236 237 2.904866 CTCTCTCGCTCGGGAGGG 60.905 72.222 17.86 11.84 42.72 4.30
237 238 3.408099 CTCTCTCGCTCGGGAGGGA 62.408 68.421 13.47 10.65 45.88 4.20
245 246 4.124943 TCGGGAGGGAGACGAGGG 62.125 72.222 0.00 0.00 32.29 4.30
246 247 4.124943 CGGGAGGGAGACGAGGGA 62.125 72.222 0.00 0.00 0.00 4.20
247 248 2.363361 GGGAGGGAGACGAGGGAA 59.637 66.667 0.00 0.00 0.00 3.97
248 249 1.758906 GGGAGGGAGACGAGGGAAG 60.759 68.421 0.00 0.00 0.00 3.46
249 250 1.306970 GGAGGGAGACGAGGGAAGA 59.693 63.158 0.00 0.00 0.00 2.87
250 251 0.753848 GGAGGGAGACGAGGGAAGAG 60.754 65.000 0.00 0.00 0.00 2.85
251 252 0.256464 GAGGGAGACGAGGGAAGAGA 59.744 60.000 0.00 0.00 0.00 3.10
252 253 0.705253 AGGGAGACGAGGGAAGAGAA 59.295 55.000 0.00 0.00 0.00 2.87
253 254 1.107945 GGGAGACGAGGGAAGAGAAG 58.892 60.000 0.00 0.00 0.00 2.85
254 255 1.107945 GGAGACGAGGGAAGAGAAGG 58.892 60.000 0.00 0.00 0.00 3.46
255 256 1.341187 GGAGACGAGGGAAGAGAAGGA 60.341 57.143 0.00 0.00 0.00 3.36
256 257 2.021457 GAGACGAGGGAAGAGAAGGAG 58.979 57.143 0.00 0.00 0.00 3.69
257 258 1.107945 GACGAGGGAAGAGAAGGAGG 58.892 60.000 0.00 0.00 0.00 4.30
258 259 0.324830 ACGAGGGAAGAGAAGGAGGG 60.325 60.000 0.00 0.00 0.00 4.30
259 260 1.681486 CGAGGGAAGAGAAGGAGGGC 61.681 65.000 0.00 0.00 0.00 5.19
260 261 1.307430 AGGGAAGAGAAGGAGGGCC 60.307 63.158 0.00 0.00 0.00 5.80
261 262 2.736826 GGGAAGAGAAGGAGGGCCG 61.737 68.421 0.00 0.00 39.96 6.13
262 263 2.736826 GGAAGAGAAGGAGGGCCGG 61.737 68.421 0.00 0.00 39.96 6.13
263 264 2.689034 AAGAGAAGGAGGGCCGGG 60.689 66.667 2.18 0.00 39.96 5.73
264 265 3.254035 AAGAGAAGGAGGGCCGGGA 62.254 63.158 2.18 0.00 39.96 5.14
265 266 3.157949 GAGAAGGAGGGCCGGGAG 61.158 72.222 2.18 0.00 39.96 4.30
266 267 3.680920 GAGAAGGAGGGCCGGGAGA 62.681 68.421 2.18 0.00 39.96 3.71
267 268 3.471806 GAAGGAGGGCCGGGAGAC 61.472 72.222 2.18 0.00 39.96 3.36
279 280 3.731295 GGGAGACGAGCAGAAAGAG 57.269 57.895 0.00 0.00 0.00 2.85
280 281 0.892063 GGGAGACGAGCAGAAAGAGT 59.108 55.000 0.00 0.00 0.00 3.24
281 282 1.135228 GGGAGACGAGCAGAAAGAGTC 60.135 57.143 0.00 0.00 0.00 3.36
282 283 1.135228 GGAGACGAGCAGAAAGAGTCC 60.135 57.143 0.00 0.00 32.70 3.85
283 284 0.523966 AGACGAGCAGAAAGAGTCCG 59.476 55.000 0.00 0.00 32.70 4.79
284 285 0.456995 GACGAGCAGAAAGAGTCCGG 60.457 60.000 0.00 0.00 0.00 5.14
285 286 1.179814 ACGAGCAGAAAGAGTCCGGT 61.180 55.000 0.00 0.00 0.00 5.28
286 287 0.734253 CGAGCAGAAAGAGTCCGGTG 60.734 60.000 0.00 0.00 0.00 4.94
287 288 1.004440 AGCAGAAAGAGTCCGGTGC 60.004 57.895 0.00 0.36 0.00 5.01
288 289 2.383527 GCAGAAAGAGTCCGGTGCG 61.384 63.158 0.00 0.00 0.00 5.34
289 290 1.006102 CAGAAAGAGTCCGGTGCGT 60.006 57.895 0.00 0.00 0.00 5.24
290 291 1.006102 AGAAAGAGTCCGGTGCGTG 60.006 57.895 0.00 0.00 0.00 5.34
291 292 1.006571 GAAAGAGTCCGGTGCGTGA 60.007 57.895 0.00 0.00 0.00 4.35
292 293 1.006102 AAAGAGTCCGGTGCGTGAG 60.006 57.895 0.00 0.00 0.00 3.51
306 307 1.997669 CGTGAGCTACTGGGAAGAAC 58.002 55.000 0.00 0.00 0.00 3.01
307 308 1.404315 CGTGAGCTACTGGGAAGAACC 60.404 57.143 0.00 0.00 38.08 3.62
308 309 1.623811 GTGAGCTACTGGGAAGAACCA 59.376 52.381 0.00 0.00 41.20 3.67
309 310 2.237392 GTGAGCTACTGGGAAGAACCAT 59.763 50.000 0.00 0.00 40.36 3.55
310 311 3.451178 GTGAGCTACTGGGAAGAACCATA 59.549 47.826 0.00 0.00 40.36 2.74
311 312 3.451178 TGAGCTACTGGGAAGAACCATAC 59.549 47.826 0.00 0.00 40.36 2.39
312 313 3.450904 AGCTACTGGGAAGAACCATACA 58.549 45.455 0.00 0.00 40.36 2.29
313 314 3.844211 AGCTACTGGGAAGAACCATACAA 59.156 43.478 0.00 0.00 40.36 2.41
314 315 3.939592 GCTACTGGGAAGAACCATACAAC 59.060 47.826 0.00 0.00 40.36 3.32
315 316 3.053831 ACTGGGAAGAACCATACAACG 57.946 47.619 0.00 0.00 40.36 4.10
316 317 2.370849 ACTGGGAAGAACCATACAACGT 59.629 45.455 0.00 0.00 40.36 3.99
317 318 3.181448 ACTGGGAAGAACCATACAACGTT 60.181 43.478 0.00 0.00 40.36 3.99
318 319 3.142951 TGGGAAGAACCATACAACGTTG 58.857 45.455 26.20 26.20 41.20 4.10
319 320 3.181453 TGGGAAGAACCATACAACGTTGA 60.181 43.478 33.66 17.69 41.20 3.18
320 321 3.435671 GGGAAGAACCATACAACGTTGAG 59.564 47.826 33.66 20.99 41.20 3.02
321 322 3.120304 GGAAGAACCATACAACGTTGAGC 60.120 47.826 33.66 13.72 38.79 4.26
322 323 3.402628 AGAACCATACAACGTTGAGCT 57.597 42.857 33.66 14.85 0.00 4.09
323 324 3.740115 AGAACCATACAACGTTGAGCTT 58.260 40.909 33.66 14.48 0.00 3.74
324 325 3.498397 AGAACCATACAACGTTGAGCTTG 59.502 43.478 33.66 21.64 0.00 4.01
325 326 3.120321 ACCATACAACGTTGAGCTTGA 57.880 42.857 33.66 11.84 0.00 3.02
326 327 3.472652 ACCATACAACGTTGAGCTTGAA 58.527 40.909 33.66 10.37 0.00 2.69
327 328 3.880490 ACCATACAACGTTGAGCTTGAAA 59.120 39.130 33.66 9.07 0.00 2.69
328 329 4.024048 ACCATACAACGTTGAGCTTGAAAG 60.024 41.667 33.66 13.84 0.00 2.62
329 330 4.466828 CATACAACGTTGAGCTTGAAAGG 58.533 43.478 33.66 3.74 0.00 3.11
330 331 2.639065 ACAACGTTGAGCTTGAAAGGA 58.361 42.857 33.66 0.00 0.00 3.36
331 332 3.013921 ACAACGTTGAGCTTGAAAGGAA 58.986 40.909 33.66 0.00 0.00 3.36
332 333 3.181500 ACAACGTTGAGCTTGAAAGGAAC 60.181 43.478 33.66 0.00 0.00 3.62
334 335 4.067972 ACGTTGAGCTTGAAAGGAACTA 57.932 40.909 0.00 0.00 38.49 2.24
335 336 4.448210 ACGTTGAGCTTGAAAGGAACTAA 58.552 39.130 0.00 0.00 38.49 2.24
336 337 5.063880 ACGTTGAGCTTGAAAGGAACTAAT 58.936 37.500 0.00 0.00 38.49 1.73
337 338 5.049405 ACGTTGAGCTTGAAAGGAACTAATG 60.049 40.000 0.00 0.00 38.49 1.90
338 339 5.617751 CGTTGAGCTTGAAAGGAACTAATGG 60.618 44.000 0.00 0.00 38.49 3.16
339 340 3.758554 TGAGCTTGAAAGGAACTAATGGC 59.241 43.478 0.00 0.00 38.49 4.40
340 341 3.758554 GAGCTTGAAAGGAACTAATGGCA 59.241 43.478 0.00 0.00 38.49 4.92
341 342 4.347607 AGCTTGAAAGGAACTAATGGCAT 58.652 39.130 0.00 0.00 38.49 4.40
342 343 4.774200 AGCTTGAAAGGAACTAATGGCATT 59.226 37.500 18.01 18.01 38.49 3.56
343 344 5.951747 AGCTTGAAAGGAACTAATGGCATTA 59.048 36.000 18.33 18.33 38.49 1.90
344 345 6.096001 AGCTTGAAAGGAACTAATGGCATTAG 59.904 38.462 34.56 34.56 45.97 1.73
356 357 7.650834 CTAATGGCATTAGTTAGAAGAGCTC 57.349 40.000 30.40 5.27 37.91 4.09
357 358 5.885449 ATGGCATTAGTTAGAAGAGCTCT 57.115 39.130 11.45 11.45 38.28 4.09
358 359 5.269505 TGGCATTAGTTAGAAGAGCTCTC 57.730 43.478 18.55 10.73 35.41 3.20
359 360 4.959210 TGGCATTAGTTAGAAGAGCTCTCT 59.041 41.667 18.55 17.28 42.75 3.10
360 361 5.068460 TGGCATTAGTTAGAAGAGCTCTCTC 59.932 44.000 18.55 15.98 39.39 3.20
361 362 5.212194 GCATTAGTTAGAAGAGCTCTCTCG 58.788 45.833 18.55 3.28 44.02 4.04
362 363 4.886247 TTAGTTAGAAGAGCTCTCTCGC 57.114 45.455 18.55 7.20 44.02 5.03
363 364 2.717390 AGTTAGAAGAGCTCTCTCGCA 58.283 47.619 18.55 7.71 44.02 5.10
364 365 2.422127 AGTTAGAAGAGCTCTCTCGCAC 59.578 50.000 18.55 16.16 44.02 5.34
365 366 2.115343 TAGAAGAGCTCTCTCGCACA 57.885 50.000 18.55 0.00 44.02 4.57
366 367 0.810648 AGAAGAGCTCTCTCGCACAG 59.189 55.000 18.55 0.00 44.02 3.66
367 368 0.179140 GAAGAGCTCTCTCGCACAGG 60.179 60.000 18.55 0.00 44.02 4.00
368 369 1.603236 AAGAGCTCTCTCGCACAGGG 61.603 60.000 18.55 0.00 44.02 4.45
369 370 3.714871 GAGCTCTCTCGCACAGGGC 62.715 68.421 6.43 0.00 39.90 5.19
388 389 4.785453 GCGGGACCTCTTGCCCAG 62.785 72.222 0.00 0.00 44.94 4.45
389 390 4.785453 CGGGACCTCTTGCCCAGC 62.785 72.222 0.00 0.00 44.94 4.85
390 391 3.334054 GGGACCTCTTGCCCAGCT 61.334 66.667 0.00 0.00 44.07 4.24
391 392 2.270527 GGACCTCTTGCCCAGCTC 59.729 66.667 0.00 0.00 0.00 4.09
392 393 2.270527 GACCTCTTGCCCAGCTCC 59.729 66.667 0.00 0.00 0.00 4.70
393 394 2.204059 ACCTCTTGCCCAGCTCCT 60.204 61.111 0.00 0.00 0.00 3.69
394 395 2.250741 GACCTCTTGCCCAGCTCCTC 62.251 65.000 0.00 0.00 0.00 3.71
395 396 2.186384 CTCTTGCCCAGCTCCTCG 59.814 66.667 0.00 0.00 0.00 4.63
396 397 3.382803 CTCTTGCCCAGCTCCTCGG 62.383 68.421 0.00 0.00 0.00 4.63
434 435 4.144703 GGGCCTCCCGTTCGACTC 62.145 72.222 0.84 0.00 32.13 3.36
435 436 4.144703 GGCCTCCCGTTCGACTCC 62.145 72.222 0.00 0.00 0.00 3.85
436 437 3.069318 GCCTCCCGTTCGACTCCT 61.069 66.667 0.00 0.00 0.00 3.69
437 438 3.066233 GCCTCCCGTTCGACTCCTC 62.066 68.421 0.00 0.00 0.00 3.71
438 439 1.378778 CCTCCCGTTCGACTCCTCT 60.379 63.158 0.00 0.00 0.00 3.69
439 440 0.107312 CCTCCCGTTCGACTCCTCTA 60.107 60.000 0.00 0.00 0.00 2.43
440 441 1.477195 CCTCCCGTTCGACTCCTCTAT 60.477 57.143 0.00 0.00 0.00 1.98
441 442 1.604755 CTCCCGTTCGACTCCTCTATG 59.395 57.143 0.00 0.00 0.00 2.23
442 443 1.211212 TCCCGTTCGACTCCTCTATGA 59.789 52.381 0.00 0.00 0.00 2.15
443 444 1.604755 CCCGTTCGACTCCTCTATGAG 59.395 57.143 0.00 0.00 38.37 2.90
453 454 2.390225 CCTCTATGAGGTGCCCTAGT 57.610 55.000 5.50 0.00 44.25 2.57
454 455 2.243810 CCTCTATGAGGTGCCCTAGTC 58.756 57.143 5.50 0.00 44.25 2.59
455 456 2.243810 CTCTATGAGGTGCCCTAGTCC 58.756 57.143 0.00 0.00 31.76 3.85
456 457 1.133136 TCTATGAGGTGCCCTAGTCCC 60.133 57.143 0.00 0.00 31.76 4.46
457 458 0.105142 TATGAGGTGCCCTAGTCCCC 60.105 60.000 0.00 0.00 31.76 4.81
458 459 2.768769 GAGGTGCCCTAGTCCCCC 60.769 72.222 0.00 0.00 31.76 5.40
459 460 4.798682 AGGTGCCCTAGTCCCCCG 62.799 72.222 0.00 0.00 28.47 5.73
460 461 4.791069 GGTGCCCTAGTCCCCCGA 62.791 72.222 0.00 0.00 0.00 5.14
461 462 3.468140 GTGCCCTAGTCCCCCGAC 61.468 72.222 0.00 0.00 39.50 4.79
464 465 2.832201 CCCTAGTCCCCCGACGTC 60.832 72.222 5.18 5.18 44.28 4.34
465 466 2.274760 CCTAGTCCCCCGACGTCT 59.725 66.667 14.70 0.00 44.28 4.18
466 467 1.823041 CCTAGTCCCCCGACGTCTC 60.823 68.421 14.70 0.00 44.28 3.36
467 468 1.823041 CTAGTCCCCCGACGTCTCC 60.823 68.421 14.70 0.00 44.28 3.71
468 469 2.547640 CTAGTCCCCCGACGTCTCCA 62.548 65.000 14.70 0.00 44.28 3.86
469 470 2.826777 TAGTCCCCCGACGTCTCCAC 62.827 65.000 14.70 3.16 44.28 4.02
470 471 3.975591 TCCCCCGACGTCTCCACT 61.976 66.667 14.70 0.00 0.00 4.00
471 472 3.760035 CCCCCGACGTCTCCACTG 61.760 72.222 14.70 0.00 0.00 3.66
472 473 4.436998 CCCCGACGTCTCCACTGC 62.437 72.222 14.70 0.00 0.00 4.40
473 474 3.374402 CCCGACGTCTCCACTGCT 61.374 66.667 14.70 0.00 0.00 4.24
474 475 2.044555 CCCGACGTCTCCACTGCTA 61.045 63.158 14.70 0.00 0.00 3.49
475 476 1.384989 CCCGACGTCTCCACTGCTAT 61.385 60.000 14.70 0.00 0.00 2.97
476 477 0.029567 CCGACGTCTCCACTGCTATC 59.970 60.000 14.70 0.00 0.00 2.08
477 478 0.029567 CGACGTCTCCACTGCTATCC 59.970 60.000 14.70 0.00 0.00 2.59
478 479 1.103803 GACGTCTCCACTGCTATCCA 58.896 55.000 8.70 0.00 0.00 3.41
487 488 3.748863 CTGCTATCCAGTTCACGCT 57.251 52.632 0.00 0.00 36.79 5.07
488 489 2.015736 CTGCTATCCAGTTCACGCTT 57.984 50.000 0.00 0.00 36.79 4.68
489 490 1.662629 CTGCTATCCAGTTCACGCTTG 59.337 52.381 0.00 0.00 36.79 4.01
490 491 1.275010 TGCTATCCAGTTCACGCTTGA 59.725 47.619 0.00 0.00 0.00 3.02
491 492 1.929836 GCTATCCAGTTCACGCTTGAG 59.070 52.381 0.00 0.00 31.71 3.02
492 493 1.929836 CTATCCAGTTCACGCTTGAGC 59.070 52.381 0.00 0.00 31.71 4.26
502 503 2.514824 GCTTGAGCGTGGGATCCC 60.515 66.667 25.22 25.22 0.00 3.85
503 504 2.989639 CTTGAGCGTGGGATCCCA 59.010 61.111 30.62 30.62 45.02 4.37
512 513 2.632831 TGGGATCCCAACCATCTCC 58.367 57.895 32.09 0.15 44.12 3.71
513 514 0.253583 TGGGATCCCAACCATCTCCA 60.254 55.000 32.09 3.12 44.12 3.86
514 515 0.183731 GGGATCCCAACCATCTCCAC 59.816 60.000 26.95 0.00 35.81 4.02
515 516 0.183731 GGATCCCAACCATCTCCACC 59.816 60.000 0.00 0.00 0.00 4.61
516 517 0.179045 GATCCCAACCATCTCCACCG 60.179 60.000 0.00 0.00 0.00 4.94
517 518 0.914417 ATCCCAACCATCTCCACCGT 60.914 55.000 0.00 0.00 0.00 4.83
518 519 1.377202 CCCAACCATCTCCACCGTG 60.377 63.158 0.00 0.00 0.00 4.94
519 520 1.676968 CCAACCATCTCCACCGTGA 59.323 57.895 0.00 0.00 0.00 4.35
520 521 0.253044 CCAACCATCTCCACCGTGAT 59.747 55.000 0.00 0.00 0.00 3.06
521 522 1.372582 CAACCATCTCCACCGTGATG 58.627 55.000 0.00 0.00 38.94 3.07
523 524 4.863707 CATCTCCACCGTGATGGG 57.136 61.111 0.00 0.00 44.64 4.00
524 525 1.524621 CATCTCCACCGTGATGGGC 60.525 63.158 0.00 0.00 44.64 5.36
525 526 1.995066 ATCTCCACCGTGATGGGCA 60.995 57.895 0.00 0.00 44.64 5.36
526 527 1.348008 ATCTCCACCGTGATGGGCAT 61.348 55.000 0.00 0.00 44.64 4.40
527 528 1.820906 CTCCACCGTGATGGGCATG 60.821 63.158 0.00 0.00 44.64 4.06
528 529 2.256072 CTCCACCGTGATGGGCATGA 62.256 60.000 0.00 0.00 44.64 3.07
529 530 1.378382 CCACCGTGATGGGCATGAA 60.378 57.895 0.00 0.00 44.64 2.57
530 531 1.378882 CCACCGTGATGGGCATGAAG 61.379 60.000 0.00 0.00 44.64 3.02
531 532 1.750399 ACCGTGATGGGCATGAAGC 60.750 57.895 0.00 0.00 44.64 3.86
540 541 4.496336 GCATGAAGCGGCTCCCCT 62.496 66.667 1.45 0.00 0.00 4.79
541 542 2.273449 CATGAAGCGGCTCCCCTT 59.727 61.111 1.45 0.00 0.00 3.95
542 543 1.526887 CATGAAGCGGCTCCCCTTA 59.473 57.895 1.45 0.00 0.00 2.69
543 544 0.815615 CATGAAGCGGCTCCCCTTAC 60.816 60.000 1.45 0.00 0.00 2.34
544 545 1.984288 ATGAAGCGGCTCCCCTTACC 61.984 60.000 1.45 0.00 0.00 2.85
548 549 3.846430 CGGCTCCCCTTACCGGAC 61.846 72.222 9.46 0.00 43.23 4.79
549 550 3.846430 GGCTCCCCTTACCGGACG 61.846 72.222 9.46 0.00 33.16 4.79
550 551 2.757099 GCTCCCCTTACCGGACGA 60.757 66.667 9.46 0.00 33.16 4.20
551 552 3.073742 GCTCCCCTTACCGGACGAC 62.074 68.421 9.46 0.00 33.16 4.34
552 553 2.751436 TCCCCTTACCGGACGACG 60.751 66.667 9.46 0.00 43.80 5.12
553 554 4.503314 CCCCTTACCGGACGACGC 62.503 72.222 9.46 0.00 42.52 5.19
554 555 4.503314 CCCTTACCGGACGACGCC 62.503 72.222 9.46 0.00 42.52 5.68
555 556 3.446570 CCTTACCGGACGACGCCT 61.447 66.667 9.46 0.00 42.52 5.52
556 557 2.570181 CTTACCGGACGACGCCTT 59.430 61.111 9.46 0.00 42.52 4.35
557 558 1.515736 CTTACCGGACGACGCCTTC 60.516 63.158 9.46 0.00 42.52 3.46
566 567 4.094684 GACGCCTTCGACCTCATG 57.905 61.111 0.00 0.00 39.41 3.07
567 568 2.125512 ACGCCTTCGACCTCATGC 60.126 61.111 0.00 0.00 39.41 4.06
568 569 2.125552 CGCCTTCGACCTCATGCA 60.126 61.111 0.00 0.00 38.10 3.96
569 570 2.456119 CGCCTTCGACCTCATGCAC 61.456 63.158 0.00 0.00 38.10 4.57
570 571 2.109126 GCCTTCGACCTCATGCACC 61.109 63.158 0.00 0.00 0.00 5.01
571 572 1.811266 CCTTCGACCTCATGCACCG 60.811 63.158 0.00 0.00 0.00 4.94
572 573 1.079819 CTTCGACCTCATGCACCGT 60.080 57.895 0.00 0.00 0.00 4.83
573 574 1.354337 CTTCGACCTCATGCACCGTG 61.354 60.000 0.00 0.00 0.00 4.94
574 575 1.811645 TTCGACCTCATGCACCGTGA 61.812 55.000 1.65 0.00 0.00 4.35
575 576 1.153568 CGACCTCATGCACCGTGAT 60.154 57.895 1.65 0.00 0.00 3.06
576 577 1.423721 CGACCTCATGCACCGTGATG 61.424 60.000 1.65 3.92 0.00 3.07
577 578 1.709147 GACCTCATGCACCGTGATGC 61.709 60.000 1.65 0.00 46.32 3.91
583 584 3.266964 GCACCGTGATGCACATGT 58.733 55.556 1.65 0.00 45.39 3.21
584 585 1.135315 GCACCGTGATGCACATGTC 59.865 57.895 1.65 0.00 45.39 3.06
585 586 1.796151 CACCGTGATGCACATGTCC 59.204 57.895 0.00 0.00 33.40 4.02
586 587 0.954938 CACCGTGATGCACATGTCCA 60.955 55.000 0.00 0.00 33.40 4.02
587 588 0.955428 ACCGTGATGCACATGTCCAC 60.955 55.000 0.00 1.34 33.40 4.02
588 589 1.421093 CGTGATGCACATGTCCACG 59.579 57.895 18.55 18.55 43.24 4.94
589 590 1.135315 GTGATGCACATGTCCACGC 59.865 57.895 0.00 0.00 34.08 5.34
590 591 2.039974 TGATGCACATGTCCACGCC 61.040 57.895 0.00 0.00 0.00 5.68
591 592 3.099619 GATGCACATGTCCACGCCG 62.100 63.158 0.00 0.00 0.00 6.46
592 593 3.604129 ATGCACATGTCCACGCCGA 62.604 57.895 0.00 0.00 0.00 5.54
593 594 3.490759 GCACATGTCCACGCCGAG 61.491 66.667 0.00 0.00 0.00 4.63
594 595 2.261361 CACATGTCCACGCCGAGA 59.739 61.111 0.00 0.00 0.00 4.04
595 596 2.094659 CACATGTCCACGCCGAGAC 61.095 63.158 0.00 0.00 0.00 3.36
596 597 2.276116 ACATGTCCACGCCGAGACT 61.276 57.895 11.91 0.00 34.02 3.24
597 598 1.807165 CATGTCCACGCCGAGACTG 60.807 63.158 11.91 5.73 34.02 3.51
598 599 3.649277 ATGTCCACGCCGAGACTGC 62.649 63.158 11.91 0.00 34.02 4.40
599 600 4.357947 GTCCACGCCGAGACTGCA 62.358 66.667 0.00 0.00 0.00 4.41
600 601 4.357947 TCCACGCCGAGACTGCAC 62.358 66.667 0.00 0.00 0.00 4.57
601 602 4.662961 CCACGCCGAGACTGCACA 62.663 66.667 0.00 0.00 0.00 4.57
602 603 2.433145 CACGCCGAGACTGCACAT 60.433 61.111 0.00 0.00 0.00 3.21
603 604 1.153842 CACGCCGAGACTGCACATA 60.154 57.895 0.00 0.00 0.00 2.29
604 605 0.735978 CACGCCGAGACTGCACATAA 60.736 55.000 0.00 0.00 0.00 1.90
605 606 0.736325 ACGCCGAGACTGCACATAAC 60.736 55.000 0.00 0.00 0.00 1.89
606 607 0.735978 CGCCGAGACTGCACATAACA 60.736 55.000 0.00 0.00 0.00 2.41
607 608 1.656652 GCCGAGACTGCACATAACAT 58.343 50.000 0.00 0.00 0.00 2.71
608 609 1.328680 GCCGAGACTGCACATAACATG 59.671 52.381 0.00 0.00 0.00 3.21
609 610 2.621338 CCGAGACTGCACATAACATGT 58.379 47.619 0.00 0.00 46.22 3.21
610 611 3.002791 CCGAGACTGCACATAACATGTT 58.997 45.455 16.68 16.68 42.70 2.71
611 612 3.436704 CCGAGACTGCACATAACATGTTT 59.563 43.478 17.78 1.87 42.70 2.83
612 613 4.397382 CGAGACTGCACATAACATGTTTG 58.603 43.478 17.78 16.04 42.70 2.93
613 614 4.152223 CGAGACTGCACATAACATGTTTGA 59.848 41.667 17.78 0.00 42.70 2.69
614 615 5.163824 CGAGACTGCACATAACATGTTTGAT 60.164 40.000 17.78 1.78 42.70 2.57
615 616 6.035975 CGAGACTGCACATAACATGTTTGATA 59.964 38.462 17.78 0.00 42.70 2.15
616 617 7.412891 CGAGACTGCACATAACATGTTTGATAA 60.413 37.037 17.78 0.00 42.70 1.75
617 618 8.109705 AGACTGCACATAACATGTTTGATAAA 57.890 30.769 17.78 0.00 42.70 1.40
618 619 8.575589 AGACTGCACATAACATGTTTGATAAAA 58.424 29.630 17.78 0.00 42.70 1.52
619 620 8.746922 ACTGCACATAACATGTTTGATAAAAG 57.253 30.769 17.78 9.34 42.70 2.27
620 621 7.814107 ACTGCACATAACATGTTTGATAAAAGG 59.186 33.333 17.78 0.62 42.70 3.11
621 622 6.589523 TGCACATAACATGTTTGATAAAAGGC 59.410 34.615 17.78 9.01 42.70 4.35
622 623 6.813152 GCACATAACATGTTTGATAAAAGGCT 59.187 34.615 17.78 0.00 42.70 4.58
623 624 7.973388 GCACATAACATGTTTGATAAAAGGCTA 59.027 33.333 17.78 0.00 42.70 3.93
624 625 9.289303 CACATAACATGTTTGATAAAAGGCTAC 57.711 33.333 17.78 0.00 42.70 3.58
625 626 9.019656 ACATAACATGTTTGATAAAAGGCTACA 57.980 29.630 17.78 0.00 41.63 2.74
626 627 9.853555 CATAACATGTTTGATAAAAGGCTACAA 57.146 29.630 17.78 0.00 0.00 2.41
628 629 8.816640 AACATGTTTGATAAAAGGCTACAAAG 57.183 30.769 4.92 0.00 32.47 2.77
629 630 8.177119 ACATGTTTGATAAAAGGCTACAAAGA 57.823 30.769 0.00 0.00 32.47 2.52
630 631 8.637986 ACATGTTTGATAAAAGGCTACAAAGAA 58.362 29.630 0.00 0.00 32.47 2.52
631 632 9.474920 CATGTTTGATAAAAGGCTACAAAGAAA 57.525 29.630 0.00 0.00 32.47 2.52
632 633 9.696917 ATGTTTGATAAAAGGCTACAAAGAAAG 57.303 29.630 0.00 0.00 32.47 2.62
633 634 8.908903 TGTTTGATAAAAGGCTACAAAGAAAGA 58.091 29.630 0.00 0.00 32.47 2.52
634 635 9.744468 GTTTGATAAAAGGCTACAAAGAAAGAA 57.256 29.630 0.00 0.00 32.47 2.52
636 637 9.965824 TTGATAAAAGGCTACAAAGAAAGAAAG 57.034 29.630 0.00 0.00 0.00 2.62
637 638 9.349713 TGATAAAAGGCTACAAAGAAAGAAAGA 57.650 29.630 0.00 0.00 0.00 2.52
641 642 9.719355 AAAAGGCTACAAAGAAAGAAAGAAAAA 57.281 25.926 0.00 0.00 0.00 1.94
661 662 6.806668 AAAAAGAATGGAGGAGGAACAAAA 57.193 33.333 0.00 0.00 0.00 2.44
662 663 6.806668 AAAAGAATGGAGGAGGAACAAAAA 57.193 33.333 0.00 0.00 0.00 1.94
663 664 6.410942 AAAGAATGGAGGAGGAACAAAAAG 57.589 37.500 0.00 0.00 0.00 2.27
664 665 5.324832 AGAATGGAGGAGGAACAAAAAGA 57.675 39.130 0.00 0.00 0.00 2.52
665 666 5.705400 AGAATGGAGGAGGAACAAAAAGAA 58.295 37.500 0.00 0.00 0.00 2.52
666 667 5.536538 AGAATGGAGGAGGAACAAAAAGAAC 59.463 40.000 0.00 0.00 0.00 3.01
667 668 4.519906 TGGAGGAGGAACAAAAAGAACT 57.480 40.909 0.00 0.00 0.00 3.01
668 669 5.640158 TGGAGGAGGAACAAAAAGAACTA 57.360 39.130 0.00 0.00 0.00 2.24
669 670 5.621193 TGGAGGAGGAACAAAAAGAACTAG 58.379 41.667 0.00 0.00 0.00 2.57
670 671 5.132144 TGGAGGAGGAACAAAAAGAACTAGT 59.868 40.000 0.00 0.00 0.00 2.57
671 672 5.701750 GGAGGAGGAACAAAAAGAACTAGTC 59.298 44.000 0.00 0.00 0.00 2.59
672 673 6.248569 AGGAGGAACAAAAAGAACTAGTCA 57.751 37.500 0.00 0.00 0.00 3.41
673 674 6.659824 AGGAGGAACAAAAAGAACTAGTCAA 58.340 36.000 0.00 0.00 0.00 3.18
674 675 7.290813 AGGAGGAACAAAAAGAACTAGTCAAT 58.709 34.615 0.00 0.00 0.00 2.57
675 676 8.437575 AGGAGGAACAAAAAGAACTAGTCAATA 58.562 33.333 0.00 0.00 0.00 1.90
676 677 9.232473 GGAGGAACAAAAAGAACTAGTCAATAT 57.768 33.333 0.00 0.00 0.00 1.28
678 679 8.515414 AGGAACAAAAAGAACTAGTCAATATGC 58.485 33.333 0.00 0.00 0.00 3.14
679 680 7.755373 GGAACAAAAAGAACTAGTCAATATGCC 59.245 37.037 0.00 0.00 0.00 4.40
680 681 8.409358 AACAAAAAGAACTAGTCAATATGCCT 57.591 30.769 0.00 0.00 0.00 4.75
681 682 9.515226 AACAAAAAGAACTAGTCAATATGCCTA 57.485 29.630 0.00 0.00 0.00 3.93
682 683 9.686683 ACAAAAAGAACTAGTCAATATGCCTAT 57.313 29.630 0.00 0.00 0.00 2.57
683 684 9.941664 CAAAAAGAACTAGTCAATATGCCTATG 57.058 33.333 0.00 0.00 0.00 2.23
684 685 9.686683 AAAAAGAACTAGTCAATATGCCTATGT 57.313 29.630 0.00 0.00 0.00 2.29
685 686 8.668510 AAAGAACTAGTCAATATGCCTATGTG 57.331 34.615 0.00 0.00 0.00 3.21
686 687 6.763355 AGAACTAGTCAATATGCCTATGTGG 58.237 40.000 0.00 0.00 39.35 4.17
687 688 6.327626 AGAACTAGTCAATATGCCTATGTGGT 59.672 38.462 0.00 0.00 38.35 4.16
688 689 7.509318 AGAACTAGTCAATATGCCTATGTGGTA 59.491 37.037 0.00 0.00 38.35 3.25
689 690 7.233389 ACTAGTCAATATGCCTATGTGGTAG 57.767 40.000 0.00 0.00 38.35 3.18
690 691 6.782988 ACTAGTCAATATGCCTATGTGGTAGT 59.217 38.462 0.00 0.00 38.35 2.73
691 692 6.500589 AGTCAATATGCCTATGTGGTAGTT 57.499 37.500 0.00 0.00 38.35 2.24
692 693 6.900194 AGTCAATATGCCTATGTGGTAGTTT 58.100 36.000 0.00 0.00 38.35 2.66
693 694 7.346471 AGTCAATATGCCTATGTGGTAGTTTT 58.654 34.615 0.00 0.00 38.35 2.43
694 695 7.834181 AGTCAATATGCCTATGTGGTAGTTTTT 59.166 33.333 0.00 0.00 38.35 1.94
713 714 2.727123 TTTTCCAACTCAGCCTGACA 57.273 45.000 0.00 0.00 0.00 3.58
714 715 2.260844 TTTCCAACTCAGCCTGACAG 57.739 50.000 0.00 0.00 0.00 3.51
715 716 0.397941 TTCCAACTCAGCCTGACAGG 59.602 55.000 17.83 17.83 38.80 4.00
716 717 0.764369 TCCAACTCAGCCTGACAGGT 60.764 55.000 22.58 7.04 37.80 4.00
717 718 0.604780 CCAACTCAGCCTGACAGGTG 60.605 60.000 22.58 17.93 37.80 4.00
718 719 0.604780 CAACTCAGCCTGACAGGTGG 60.605 60.000 22.58 14.65 37.80 4.61
719 720 1.772819 AACTCAGCCTGACAGGTGGG 61.773 60.000 22.58 19.62 37.80 4.61
720 721 3.618780 CTCAGCCTGACAGGTGGGC 62.619 68.421 22.58 9.32 45.57 5.36
721 722 4.729918 CAGCCTGACAGGTGGGCC 62.730 72.222 22.58 5.68 46.31 5.80
730 731 3.674278 AGGTGGGCCTGAACAGTT 58.326 55.556 4.53 0.00 45.05 3.16
731 732 2.862780 AGGTGGGCCTGAACAGTTA 58.137 52.632 4.53 0.00 45.05 2.24
732 733 0.693049 AGGTGGGCCTGAACAGTTAG 59.307 55.000 4.53 0.00 45.05 2.34
733 734 0.690762 GGTGGGCCTGAACAGTTAGA 59.309 55.000 4.53 0.00 0.00 2.10
734 735 1.610886 GGTGGGCCTGAACAGTTAGAC 60.611 57.143 4.53 0.00 0.00 2.59
735 736 0.690762 TGGGCCTGAACAGTTAGACC 59.309 55.000 4.53 0.00 0.00 3.85
736 737 0.391263 GGGCCTGAACAGTTAGACCG 60.391 60.000 0.84 0.00 0.00 4.79
737 738 0.320697 GGCCTGAACAGTTAGACCGT 59.679 55.000 0.00 0.00 0.00 4.83
738 739 1.672145 GGCCTGAACAGTTAGACCGTC 60.672 57.143 0.00 0.00 0.00 4.79
739 740 1.000506 GCCTGAACAGTTAGACCGTCA 59.999 52.381 0.40 0.00 0.00 4.35
740 741 2.927014 GCCTGAACAGTTAGACCGTCAG 60.927 54.545 0.40 0.00 0.00 3.51
741 742 2.296471 CCTGAACAGTTAGACCGTCAGT 59.704 50.000 0.40 0.00 0.00 3.41
742 743 3.309388 CTGAACAGTTAGACCGTCAGTG 58.691 50.000 0.40 0.00 0.00 3.66
743 744 2.691526 TGAACAGTTAGACCGTCAGTGT 59.308 45.455 0.40 0.00 0.00 3.55
744 745 3.131577 TGAACAGTTAGACCGTCAGTGTT 59.868 43.478 10.40 10.40 0.00 3.32
745 746 3.814005 ACAGTTAGACCGTCAGTGTTT 57.186 42.857 0.40 0.00 0.00 2.83
746 747 4.133013 ACAGTTAGACCGTCAGTGTTTT 57.867 40.909 0.40 0.00 0.00 2.43
808 809 5.335661 GCACCGATTTCTAAAGTGATGGTTT 60.336 40.000 0.00 0.00 0.00 3.27
819 820 8.514594 TCTAAAGTGATGGTTTTCTGCTAATTG 58.485 33.333 0.00 0.00 0.00 2.32
822 823 3.505680 TGATGGTTTTCTGCTAATTGCGT 59.494 39.130 0.00 0.00 46.63 5.24
825 826 3.505680 TGGTTTTCTGCTAATTGCGTCAT 59.494 39.130 0.00 0.00 46.63 3.06
830 834 5.422666 TTCTGCTAATTGCGTCATAATGG 57.577 39.130 0.00 0.00 46.63 3.16
844 848 4.009675 TCATAATGGTGGTTCTGTGCTTC 58.990 43.478 0.00 0.00 0.00 3.86
867 871 9.658475 CTTCTTTACTTCATCGTCTACATCTAG 57.342 37.037 0.00 0.00 0.00 2.43
871 875 8.734218 TTACTTCATCGTCTACATCTAGAAGT 57.266 34.615 5.84 5.84 44.45 3.01
884 888 6.846350 ACATCTAGAAGTGCATTTTTGCTAC 58.154 36.000 0.00 0.00 35.49 3.58
940 944 1.024579 CACCCGCACTTTTATCCGCT 61.025 55.000 0.00 0.00 0.00 5.52
979 984 5.818136 ATCGAAATTGTAATCCACACCAG 57.182 39.130 0.00 0.00 36.69 4.00
981 986 4.454161 TCGAAATTGTAATCCACACCAGTG 59.546 41.667 0.00 0.00 45.47 3.66
1035 1040 0.621082 AAAGAGCCTCTAAGCCCACC 59.379 55.000 0.00 0.00 0.00 4.61
1056 1061 4.418328 GCCATGGCCACCACCGTA 62.418 66.667 27.24 0.00 35.80 4.02
1070 1075 1.306970 CCGTACTCTCCCTCCCACT 59.693 63.158 0.00 0.00 0.00 4.00
1073 1078 2.622452 CCGTACTCTCCCTCCCACTAAA 60.622 54.545 0.00 0.00 0.00 1.85
1074 1079 3.297736 CGTACTCTCCCTCCCACTAAAT 58.702 50.000 0.00 0.00 0.00 1.40
1076 1081 2.765502 ACTCTCCCTCCCACTAAATCC 58.234 52.381 0.00 0.00 0.00 3.01
1088 1093 4.446311 CCCACTAAATCCAATCCCCTACAG 60.446 50.000 0.00 0.00 0.00 2.74
1098 1103 5.492524 TCCAATCCCCTACAGAAAATTCTCT 59.507 40.000 0.00 0.00 34.74 3.10
1102 1107 3.432326 CCCCTACAGAAAATTCTCTCCCG 60.432 52.174 0.00 0.00 34.74 5.14
1115 1120 4.853142 TCCCGCTCTACCCGCCAT 62.853 66.667 0.00 0.00 0.00 4.40
1573 1578 4.641645 TGCTCAAGGCGTGTGGGG 62.642 66.667 0.00 0.00 45.43 4.96
1686 1691 1.089481 CGATGTATGCCAAGTGCGGT 61.089 55.000 0.00 0.00 45.60 5.68
1687 1692 0.378257 GATGTATGCCAAGTGCGGTG 59.622 55.000 0.00 0.00 45.60 4.94
1764 1769 3.422217 CGTCGTGGAATTCAGTGATATCG 59.578 47.826 7.93 0.00 0.00 2.92
1866 1871 1.037030 ACACAACTGTTGGGGTGCTG 61.037 55.000 25.15 14.66 38.76 4.41
2148 2153 0.244721 GTTTTCAGCCTGACCATGCC 59.755 55.000 0.00 0.00 0.00 4.40
2229 2234 8.159447 AGAGAGGTTCATGCATATGCTATAAAA 58.841 33.333 27.13 12.11 42.66 1.52
2355 2360 6.998074 GGATTAAAGACCACATATCATGGACA 59.002 38.462 9.17 0.00 39.87 4.02
2385 2390 3.963428 ACTTGTTATGCTCGGAGTTCT 57.037 42.857 6.90 0.00 0.00 3.01
2386 2391 4.273148 ACTTGTTATGCTCGGAGTTCTT 57.727 40.909 6.90 0.00 0.00 2.52
2387 2392 3.997021 ACTTGTTATGCTCGGAGTTCTTG 59.003 43.478 6.90 0.00 0.00 3.02
2493 2498 2.431782 AGCATGCAGTGGTTTGAAAACT 59.568 40.909 21.98 0.00 38.89 2.66
2499 2504 6.761099 TGCAGTGGTTTGAAAACTAGTTTA 57.239 33.333 20.83 3.97 38.89 2.01
2520 2525 0.751452 TGGCAAAGCAACTGCATTCA 59.249 45.000 4.22 0.00 45.16 2.57
2734 2739 5.494632 TGCAGAGATGCAAAATACAGATG 57.505 39.130 0.00 0.00 42.40 2.90
2811 2816 1.203050 TCCTTGGCAAAAGGGAAGGAG 60.203 52.381 15.36 0.00 39.25 3.69
2857 2862 4.440112 GGAATTTTCTTATGGAAGGTGCCG 60.440 45.833 0.00 0.00 35.16 5.69
3118 3123 6.435430 TTGTCGATGAGGGAAAATGTTATG 57.565 37.500 0.00 0.00 0.00 1.90
3279 3284 3.555324 TGGTGCGCACTCCTTGGA 61.555 61.111 36.84 10.62 0.00 3.53
3303 3308 3.620427 TGCCGTATACACAAGAACCAT 57.380 42.857 3.32 0.00 0.00 3.55
3408 3413 1.747709 CTGAGATGGGCAAGTGGAAG 58.252 55.000 0.00 0.00 0.00 3.46
3513 3518 1.227823 CCACACCTTCACCGCAAGA 60.228 57.895 0.00 0.00 43.02 3.02
3691 3696 1.273887 CTCGCGATCGCATTTGGTC 59.726 57.895 36.45 7.93 42.06 4.02
3705 3710 0.392706 TTGGTCTGATCAGCACACGT 59.607 50.000 18.36 0.00 0.00 4.49
3816 3821 2.430382 AAATCGTGGTCCGTGACGCT 62.430 55.000 0.00 0.00 37.94 5.07
3840 3845 2.686915 CAGATTCCACCATTTCAGAGGC 59.313 50.000 0.00 0.00 0.00 4.70
3843 3848 1.750399 CCACCATTTCAGAGGCGGG 60.750 63.158 0.00 0.00 0.00 6.13
3852 3857 0.832135 TCAGAGGCGGGTCTTGTTCT 60.832 55.000 0.00 0.00 0.00 3.01
3891 3896 5.420104 GTGAATGGTTCTCCCTTCATGAAAT 59.580 40.000 9.88 0.00 45.21 2.17
3895 3900 8.434589 AATGGTTCTCCCTTCATGAAATTTAA 57.565 30.769 9.88 0.00 0.00 1.52
3920 3925 2.032030 ACGGATTGTTTGCTCTTGTTCG 60.032 45.455 0.00 0.00 0.00 3.95
3937 3942 6.696583 TCTTGTTCGTAAACACGTGAGATTTA 59.303 34.615 25.01 13.78 44.90 1.40
3943 3948 6.864685 TCGTAAACACGTGAGATTTACAAGAT 59.135 34.615 26.54 1.88 41.66 2.40
3970 3975 0.117742 TCGGGGAGAAGGGTTAGGTT 59.882 55.000 0.00 0.00 0.00 3.50
3971 3976 1.362237 TCGGGGAGAAGGGTTAGGTTA 59.638 52.381 0.00 0.00 0.00 2.85
3974 3979 2.125233 GGGAGAAGGGTTAGGTTAGGG 58.875 57.143 0.00 0.00 0.00 3.53
3976 3981 3.310879 GGGAGAAGGGTTAGGTTAGGGTA 60.311 52.174 0.00 0.00 0.00 3.69
3982 3987 4.441757 AGGGTTAGGTTAGGGTACATGTT 58.558 43.478 2.30 0.00 0.00 2.71
4006 4011 5.091261 AGATGGATAAAGCGTCTCAACTT 57.909 39.130 0.00 0.00 0.00 2.66
4092 4098 2.577105 AGGACTCCTAACCGAGAGAGAA 59.423 50.000 0.00 0.00 34.13 2.87
4111 4131 6.444704 AGAGAAATGTTACAGGAGGGAGATA 58.555 40.000 0.00 0.00 0.00 1.98
4126 4146 7.014422 AGGAGGGAGATAAAAGACATAGTAACG 59.986 40.741 0.00 0.00 0.00 3.18
4210 4255 7.334421 CAGCCGCCATAATATATCTTTAACACT 59.666 37.037 0.00 0.00 0.00 3.55
4231 4276 3.707102 CTCTCCCTTAATCCGAACTTCCT 59.293 47.826 0.00 0.00 0.00 3.36
4294 4339 4.742138 GCCAAGGCTTTTGTAAAACCATCA 60.742 41.667 3.29 0.00 38.26 3.07
4336 4381 2.851195 ACAAACCGAATCTGCAACTCT 58.149 42.857 0.00 0.00 0.00 3.24
4368 4413 5.972107 ACTCTTTCCCTCACAAAATGATG 57.028 39.130 0.00 0.00 36.48 3.07
4377 4422 5.186409 CCCTCACAAAATGATGGTCAATCTT 59.814 40.000 0.00 0.00 38.10 2.40
4447 4492 2.009774 GCGCCAAGATTGTCACACTAT 58.990 47.619 0.00 0.00 0.00 2.12
4510 4616 4.448210 GGTACTTGACCTGAAAACTGTGA 58.552 43.478 0.00 0.00 45.89 3.58
4547 4653 6.118170 CACACCATGAGATCAAATTAGGTCT 58.882 40.000 0.00 0.00 0.00 3.85
4549 4655 7.440556 CACACCATGAGATCAAATTAGGTCTAG 59.559 40.741 0.00 0.00 0.00 2.43
4551 4657 8.206867 CACCATGAGATCAAATTAGGTCTAGAA 58.793 37.037 0.00 0.00 0.00 2.10
4555 4661 9.844257 ATGAGATCAAATTAGGTCTAGAAAAGG 57.156 33.333 0.00 0.00 0.00 3.11
4565 4672 2.816672 GTCTAGAAAAGGCTGCAAAGCT 59.183 45.455 0.50 0.00 34.73 3.74
4598 4705 6.737720 TCTTCTATCATCTATGCAACCTGT 57.262 37.500 0.00 0.00 0.00 4.00
4606 4713 2.637382 TCTATGCAACCTGTCCAGTCAA 59.363 45.455 0.00 0.00 0.00 3.18
4638 4745 2.157668 CGCACTAACAAGTGTGGATGAC 59.842 50.000 10.49 0.00 44.05 3.06
4737 4844 4.309099 CTGTAGTTGGTGCATGCAAAAAT 58.691 39.130 24.58 20.42 0.00 1.82
4739 4846 5.847304 TGTAGTTGGTGCATGCAAAAATTA 58.153 33.333 24.58 16.77 0.00 1.40
4789 4896 0.398318 AGGCCTGGTGAGAGTCAAAC 59.602 55.000 3.11 0.00 0.00 2.93
4797 4904 2.545946 GGTGAGAGTCAAACACTGAAGC 59.454 50.000 12.38 0.00 34.41 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.696281 GCAGCTTTTTGTTTGCCAATT 57.304 38.095 0.00 0.00 31.81 2.32
5 6 1.941975 ACATGGCAGCTTTTTGTTTGC 59.058 42.857 0.00 0.00 35.87 3.68
6 7 3.742369 CCTACATGGCAGCTTTTTGTTTG 59.258 43.478 0.00 0.00 0.00 2.93
7 8 3.387699 ACCTACATGGCAGCTTTTTGTTT 59.612 39.130 0.00 0.00 40.22 2.83
8 9 2.965147 ACCTACATGGCAGCTTTTTGTT 59.035 40.909 0.00 0.00 40.22 2.83
9 10 2.597455 ACCTACATGGCAGCTTTTTGT 58.403 42.857 0.00 0.00 40.22 2.83
10 11 3.129287 CCTACCTACATGGCAGCTTTTTG 59.871 47.826 0.00 0.00 40.22 2.44
11 12 3.245264 ACCTACCTACATGGCAGCTTTTT 60.245 43.478 0.00 0.00 40.22 1.94
12 13 2.308866 ACCTACCTACATGGCAGCTTTT 59.691 45.455 0.00 0.00 40.22 2.27
13 14 1.916181 ACCTACCTACATGGCAGCTTT 59.084 47.619 0.00 0.00 40.22 3.51
14 15 1.584724 ACCTACCTACATGGCAGCTT 58.415 50.000 0.00 0.00 40.22 3.74
15 16 1.584724 AACCTACCTACATGGCAGCT 58.415 50.000 0.00 0.00 40.22 4.24
16 17 3.203716 GTTAACCTACCTACATGGCAGC 58.796 50.000 0.00 0.00 40.22 5.25
17 18 3.454812 AGGTTAACCTACCTACATGGCAG 59.545 47.826 26.03 0.00 46.65 4.85
18 19 3.199071 CAGGTTAACCTACCTACATGGCA 59.801 47.826 26.66 0.00 46.80 4.92
19 20 3.199289 ACAGGTTAACCTACCTACATGGC 59.801 47.826 26.66 0.00 46.80 4.40
20 21 4.715297 AGACAGGTTAACCTACCTACATGG 59.285 45.833 26.66 13.29 46.80 3.66
21 22 5.934402 AGACAGGTTAACCTACCTACATG 57.066 43.478 26.66 14.79 46.80 3.21
22 23 6.947376 AAAGACAGGTTAACCTACCTACAT 57.053 37.500 26.66 12.67 46.80 2.29
23 24 6.752285 AAAAGACAGGTTAACCTACCTACA 57.248 37.500 26.66 0.00 46.80 2.74
24 25 7.448420 AGAAAAAGACAGGTTAACCTACCTAC 58.552 38.462 26.66 15.07 46.80 3.18
25 26 7.622502 AGAAAAAGACAGGTTAACCTACCTA 57.377 36.000 26.66 0.00 46.80 3.08
27 28 6.206243 GGAAGAAAAAGACAGGTTAACCTACC 59.794 42.308 26.66 19.61 46.65 3.18
28 29 6.996879 AGGAAGAAAAAGACAGGTTAACCTAC 59.003 38.462 26.66 21.50 46.65 3.18
29 30 7.145474 AGGAAGAAAAAGACAGGTTAACCTA 57.855 36.000 26.66 0.00 46.65 3.08
31 32 5.241064 GGAGGAAGAAAAAGACAGGTTAACC 59.759 44.000 17.41 17.41 0.00 2.85
32 33 5.826208 TGGAGGAAGAAAAAGACAGGTTAAC 59.174 40.000 0.00 0.00 0.00 2.01
33 34 5.826208 GTGGAGGAAGAAAAAGACAGGTTAA 59.174 40.000 0.00 0.00 0.00 2.01
34 35 5.104277 TGTGGAGGAAGAAAAAGACAGGTTA 60.104 40.000 0.00 0.00 0.00 2.85
35 36 4.207955 GTGGAGGAAGAAAAAGACAGGTT 58.792 43.478 0.00 0.00 0.00 3.50
36 37 3.202151 TGTGGAGGAAGAAAAAGACAGGT 59.798 43.478 0.00 0.00 0.00 4.00
37 38 3.817647 CTGTGGAGGAAGAAAAAGACAGG 59.182 47.826 0.00 0.00 0.00 4.00
38 39 3.817647 CCTGTGGAGGAAGAAAAAGACAG 59.182 47.826 0.00 0.00 42.93 3.51
39 40 3.820557 CCTGTGGAGGAAGAAAAAGACA 58.179 45.455 0.00 0.00 42.93 3.41
40 41 2.554462 GCCTGTGGAGGAAGAAAAAGAC 59.446 50.000 0.00 0.00 42.93 3.01
41 42 2.174639 TGCCTGTGGAGGAAGAAAAAGA 59.825 45.455 0.00 0.00 42.93 2.52
42 43 2.586425 TGCCTGTGGAGGAAGAAAAAG 58.414 47.619 0.00 0.00 42.93 2.27
43 44 2.746279 TGCCTGTGGAGGAAGAAAAA 57.254 45.000 0.00 0.00 42.93 1.94
49 50 1.834856 CTCTGCTGCCTGTGGAGGAA 61.835 60.000 0.00 0.00 42.93 3.36
50 51 2.203832 TCTGCTGCCTGTGGAGGA 60.204 61.111 0.00 0.00 42.93 3.71
51 52 2.268280 CTCTGCTGCCTGTGGAGG 59.732 66.667 0.00 0.00 43.19 4.30
52 53 2.268280 CCTCTGCTGCCTGTGGAG 59.732 66.667 0.00 0.00 0.00 3.86
53 54 4.025858 GCCTCTGCTGCCTGTGGA 62.026 66.667 12.73 0.00 33.53 4.02
55 56 4.383861 TCGCCTCTGCTGCCTGTG 62.384 66.667 0.00 0.00 34.43 3.66
56 57 4.079850 CTCGCCTCTGCTGCCTGT 62.080 66.667 0.00 0.00 34.43 4.00
57 58 3.719883 CTCTCGCCTCTGCTGCCTG 62.720 68.421 0.00 0.00 34.43 4.85
58 59 3.459965 CTCTCGCCTCTGCTGCCT 61.460 66.667 0.00 0.00 34.43 4.75
59 60 4.527583 CCTCTCGCCTCTGCTGCC 62.528 72.222 0.00 0.00 34.43 4.85
60 61 3.768922 ACCTCTCGCCTCTGCTGC 61.769 66.667 0.00 0.00 34.43 5.25
61 62 2.183811 CACCTCTCGCCTCTGCTG 59.816 66.667 0.00 0.00 34.43 4.41
62 63 3.073735 CCACCTCTCGCCTCTGCT 61.074 66.667 0.00 0.00 34.43 4.24
63 64 4.154347 CCCACCTCTCGCCTCTGC 62.154 72.222 0.00 0.00 0.00 4.26
64 65 4.154347 GCCCACCTCTCGCCTCTG 62.154 72.222 0.00 0.00 0.00 3.35
71 72 2.656069 TACAAGGCGCCCACCTCTC 61.656 63.158 26.15 0.00 39.93 3.20
72 73 2.606519 TACAAGGCGCCCACCTCT 60.607 61.111 26.15 0.00 39.93 3.69
73 74 2.436115 GTACAAGGCGCCCACCTC 60.436 66.667 26.15 7.87 39.93 3.85
74 75 4.388499 CGTACAAGGCGCCCACCT 62.388 66.667 26.15 0.00 43.91 4.00
82 83 2.740714 CCAAGCTCGCGTACAAGGC 61.741 63.158 5.77 2.52 0.00 4.35
83 84 2.100631 CCCAAGCTCGCGTACAAGG 61.101 63.158 5.77 4.26 0.00 3.61
84 85 2.740714 GCCCAAGCTCGCGTACAAG 61.741 63.158 5.77 0.00 35.50 3.16
85 86 2.740826 GCCCAAGCTCGCGTACAA 60.741 61.111 5.77 0.00 35.50 2.41
86 87 3.932580 CTGCCCAAGCTCGCGTACA 62.933 63.158 5.77 0.00 40.80 2.90
87 88 3.188786 CTGCCCAAGCTCGCGTAC 61.189 66.667 5.77 0.00 40.80 3.67
96 97 4.399395 TCGCCTCAGCTGCCCAAG 62.399 66.667 9.47 0.28 36.60 3.61
97 98 4.704833 GTCGCCTCAGCTGCCCAA 62.705 66.667 9.47 0.00 36.60 4.12
99 100 2.914777 CTTAGTCGCCTCAGCTGCCC 62.915 65.000 9.47 0.00 36.60 5.36
100 101 1.520342 CTTAGTCGCCTCAGCTGCC 60.520 63.158 9.47 0.00 36.60 4.85
101 102 1.520342 CCTTAGTCGCCTCAGCTGC 60.520 63.158 9.47 0.00 36.60 5.25
102 103 1.520342 GCCTTAGTCGCCTCAGCTG 60.520 63.158 7.63 7.63 36.60 4.24
103 104 2.896443 GCCTTAGTCGCCTCAGCT 59.104 61.111 0.00 0.00 36.60 4.24
104 105 2.583593 CGCCTTAGTCGCCTCAGC 60.584 66.667 0.00 0.00 0.00 4.26
105 106 1.064946 CTCGCCTTAGTCGCCTCAG 59.935 63.158 0.00 0.00 0.00 3.35
106 107 1.677966 ACTCGCCTTAGTCGCCTCA 60.678 57.895 0.00 0.00 0.00 3.86
107 108 1.226717 CACTCGCCTTAGTCGCCTC 60.227 63.158 0.00 0.00 0.00 4.70
108 109 2.711922 CCACTCGCCTTAGTCGCCT 61.712 63.158 0.00 0.00 0.00 5.52
109 110 2.202756 CCACTCGCCTTAGTCGCC 60.203 66.667 0.00 0.00 0.00 5.54
110 111 2.202756 CCCACTCGCCTTAGTCGC 60.203 66.667 0.00 0.00 0.00 5.19
111 112 2.494918 CCCCACTCGCCTTAGTCG 59.505 66.667 0.00 0.00 0.00 4.18
112 113 2.187163 GCCCCACTCGCCTTAGTC 59.813 66.667 0.00 0.00 0.00 2.59
113 114 2.606519 TGCCCCACTCGCCTTAGT 60.607 61.111 0.00 0.00 0.00 2.24
114 115 2.187946 CTGCCCCACTCGCCTTAG 59.812 66.667 0.00 0.00 0.00 2.18
115 116 4.096003 GCTGCCCCACTCGCCTTA 62.096 66.667 0.00 0.00 0.00 2.69
124 125 3.970410 CCTTCAGTGGCTGCCCCA 61.970 66.667 17.53 0.00 42.79 4.96
125 126 3.927481 GACCTTCAGTGGCTGCCCC 62.927 68.421 17.53 4.13 0.00 5.80
126 127 2.360475 GACCTTCAGTGGCTGCCC 60.360 66.667 17.53 7.66 0.00 5.36
127 128 1.673665 CAGACCTTCAGTGGCTGCC 60.674 63.158 12.87 12.87 0.00 4.85
128 129 1.673665 CCAGACCTTCAGTGGCTGC 60.674 63.158 0.00 0.00 33.22 5.25
129 130 0.036577 CTCCAGACCTTCAGTGGCTG 60.037 60.000 0.00 0.00 33.85 4.85
130 131 1.197430 CCTCCAGACCTTCAGTGGCT 61.197 60.000 0.00 0.00 0.00 4.75
131 132 1.194781 TCCTCCAGACCTTCAGTGGC 61.195 60.000 0.00 0.00 0.00 5.01
132 133 0.901124 CTCCTCCAGACCTTCAGTGG 59.099 60.000 0.00 0.00 0.00 4.00
133 134 1.930251 TCTCCTCCAGACCTTCAGTG 58.070 55.000 0.00 0.00 0.00 3.66
134 135 2.465813 CATCTCCTCCAGACCTTCAGT 58.534 52.381 0.00 0.00 32.26 3.41
135 136 1.761784 CCATCTCCTCCAGACCTTCAG 59.238 57.143 0.00 0.00 32.26 3.02
136 137 1.623557 CCCATCTCCTCCAGACCTTCA 60.624 57.143 0.00 0.00 32.26 3.02
137 138 1.127343 CCCATCTCCTCCAGACCTTC 58.873 60.000 0.00 0.00 32.26 3.46
138 139 0.327000 CCCCATCTCCTCCAGACCTT 60.327 60.000 0.00 0.00 32.26 3.50
139 140 1.316266 CCCCATCTCCTCCAGACCT 59.684 63.158 0.00 0.00 32.26 3.85
140 141 1.768077 CCCCCATCTCCTCCAGACC 60.768 68.421 0.00 0.00 32.26 3.85
141 142 0.326618 TTCCCCCATCTCCTCCAGAC 60.327 60.000 0.00 0.00 32.26 3.51
142 143 0.421495 TTTCCCCCATCTCCTCCAGA 59.579 55.000 0.00 0.00 34.78 3.86
143 144 0.842635 CTTTCCCCCATCTCCTCCAG 59.157 60.000 0.00 0.00 0.00 3.86
144 145 1.281925 GCTTTCCCCCATCTCCTCCA 61.282 60.000 0.00 0.00 0.00 3.86
145 146 1.281925 TGCTTTCCCCCATCTCCTCC 61.282 60.000 0.00 0.00 0.00 4.30
146 147 0.182299 CTGCTTTCCCCCATCTCCTC 59.818 60.000 0.00 0.00 0.00 3.71
147 148 1.284841 CCTGCTTTCCCCCATCTCCT 61.285 60.000 0.00 0.00 0.00 3.69
148 149 1.228510 CCTGCTTTCCCCCATCTCC 59.771 63.158 0.00 0.00 0.00 3.71
149 150 0.106967 GACCTGCTTTCCCCCATCTC 60.107 60.000 0.00 0.00 0.00 2.75
150 151 0.551131 AGACCTGCTTTCCCCCATCT 60.551 55.000 0.00 0.00 0.00 2.90
151 152 0.394899 CAGACCTGCTTTCCCCCATC 60.395 60.000 0.00 0.00 0.00 3.51
152 153 1.693640 CAGACCTGCTTTCCCCCAT 59.306 57.895 0.00 0.00 0.00 4.00
153 154 3.170362 CAGACCTGCTTTCCCCCA 58.830 61.111 0.00 0.00 0.00 4.96
190 191 4.717313 GGAGTGCCGTTGTCCCCC 62.717 72.222 0.00 0.00 0.00 5.40
191 192 3.637273 AGGAGTGCCGTTGTCCCC 61.637 66.667 0.00 0.00 39.96 4.81
192 193 2.358737 CAGGAGTGCCGTTGTCCC 60.359 66.667 0.00 0.00 39.96 4.46
193 194 1.961277 CACAGGAGTGCCGTTGTCC 60.961 63.158 0.00 0.00 39.21 4.02
194 195 3.642755 CACAGGAGTGCCGTTGTC 58.357 61.111 0.00 0.00 39.21 3.18
203 204 2.912956 AGAGAGAGAGAGACACAGGAGT 59.087 50.000 0.00 0.00 0.00 3.85
204 205 3.535561 GAGAGAGAGAGAGACACAGGAG 58.464 54.545 0.00 0.00 0.00 3.69
205 206 2.093711 CGAGAGAGAGAGAGACACAGGA 60.094 54.545 0.00 0.00 0.00 3.86
206 207 2.279741 CGAGAGAGAGAGAGACACAGG 58.720 57.143 0.00 0.00 0.00 4.00
207 208 1.665679 GCGAGAGAGAGAGAGACACAG 59.334 57.143 0.00 0.00 0.00 3.66
208 209 1.277842 AGCGAGAGAGAGAGAGACACA 59.722 52.381 0.00 0.00 0.00 3.72
209 210 1.933853 GAGCGAGAGAGAGAGAGACAC 59.066 57.143 0.00 0.00 0.00 3.67
210 211 1.470805 CGAGCGAGAGAGAGAGAGACA 60.471 57.143 0.00 0.00 0.00 3.41
211 212 1.209128 CGAGCGAGAGAGAGAGAGAC 58.791 60.000 0.00 0.00 0.00 3.36
212 213 0.104120 CCGAGCGAGAGAGAGAGAGA 59.896 60.000 0.00 0.00 0.00 3.10
213 214 0.880278 CCCGAGCGAGAGAGAGAGAG 60.880 65.000 0.00 0.00 0.00 3.20
214 215 1.145156 CCCGAGCGAGAGAGAGAGA 59.855 63.158 0.00 0.00 0.00 3.10
215 216 0.880278 CTCCCGAGCGAGAGAGAGAG 60.880 65.000 0.00 0.00 31.43 3.20
216 217 1.145156 CTCCCGAGCGAGAGAGAGA 59.855 63.158 0.00 0.00 31.43 3.10
217 218 1.891919 CCTCCCGAGCGAGAGAGAG 60.892 68.421 2.86 0.00 31.43 3.20
218 219 2.190843 CCTCCCGAGCGAGAGAGA 59.809 66.667 2.86 0.00 31.43 3.10
219 220 2.904866 CCCTCCCGAGCGAGAGAG 60.905 72.222 2.86 1.10 31.43 3.20
220 221 3.408099 CTCCCTCCCGAGCGAGAGA 62.408 68.421 2.86 0.00 35.84 3.10
221 222 2.904866 CTCCCTCCCGAGCGAGAG 60.905 72.222 0.84 0.00 35.84 3.20
222 223 3.408853 TCTCCCTCCCGAGCGAGA 61.409 66.667 5.20 5.20 39.34 4.04
223 224 3.213402 GTCTCCCTCCCGAGCGAG 61.213 72.222 0.70 0.70 35.28 5.03
226 227 3.213402 CTCGTCTCCCTCCCGAGC 61.213 72.222 0.00 0.00 41.21 5.03
227 228 2.517402 CCTCGTCTCCCTCCCGAG 60.517 72.222 0.00 0.00 45.71 4.63
228 229 4.124943 CCCTCGTCTCCCTCCCGA 62.125 72.222 0.00 0.00 0.00 5.14
229 230 3.657038 TTCCCTCGTCTCCCTCCCG 62.657 68.421 0.00 0.00 0.00 5.14
230 231 1.758906 CTTCCCTCGTCTCCCTCCC 60.759 68.421 0.00 0.00 0.00 4.30
231 232 0.753848 CTCTTCCCTCGTCTCCCTCC 60.754 65.000 0.00 0.00 0.00 4.30
232 233 0.256464 TCTCTTCCCTCGTCTCCCTC 59.744 60.000 0.00 0.00 0.00 4.30
233 234 0.705253 TTCTCTTCCCTCGTCTCCCT 59.295 55.000 0.00 0.00 0.00 4.20
234 235 1.107945 CTTCTCTTCCCTCGTCTCCC 58.892 60.000 0.00 0.00 0.00 4.30
235 236 1.107945 CCTTCTCTTCCCTCGTCTCC 58.892 60.000 0.00 0.00 0.00 3.71
236 237 2.021457 CTCCTTCTCTTCCCTCGTCTC 58.979 57.143 0.00 0.00 0.00 3.36
237 238 1.341581 CCTCCTTCTCTTCCCTCGTCT 60.342 57.143 0.00 0.00 0.00 4.18
238 239 1.107945 CCTCCTTCTCTTCCCTCGTC 58.892 60.000 0.00 0.00 0.00 4.20
239 240 0.324830 CCCTCCTTCTCTTCCCTCGT 60.325 60.000 0.00 0.00 0.00 4.18
240 241 1.681486 GCCCTCCTTCTCTTCCCTCG 61.681 65.000 0.00 0.00 0.00 4.63
241 242 1.341913 GGCCCTCCTTCTCTTCCCTC 61.342 65.000 0.00 0.00 0.00 4.30
242 243 1.307430 GGCCCTCCTTCTCTTCCCT 60.307 63.158 0.00 0.00 0.00 4.20
243 244 2.736826 CGGCCCTCCTTCTCTTCCC 61.737 68.421 0.00 0.00 0.00 3.97
244 245 2.736826 CCGGCCCTCCTTCTCTTCC 61.737 68.421 0.00 0.00 0.00 3.46
245 246 2.736826 CCCGGCCCTCCTTCTCTTC 61.737 68.421 0.00 0.00 0.00 2.87
246 247 2.689034 CCCGGCCCTCCTTCTCTT 60.689 66.667 0.00 0.00 0.00 2.85
247 248 3.684628 TCCCGGCCCTCCTTCTCT 61.685 66.667 0.00 0.00 0.00 3.10
248 249 3.157949 CTCCCGGCCCTCCTTCTC 61.158 72.222 0.00 0.00 0.00 2.87
249 250 3.684628 TCTCCCGGCCCTCCTTCT 61.685 66.667 0.00 0.00 0.00 2.85
250 251 3.471806 GTCTCCCGGCCCTCCTTC 61.472 72.222 0.00 0.00 0.00 3.46
258 259 3.296709 TTTCTGCTCGTCTCCCGGC 62.297 63.158 0.00 0.00 37.11 6.13
259 260 1.153745 CTTTCTGCTCGTCTCCCGG 60.154 63.158 0.00 0.00 37.11 5.73
260 261 0.179150 CTCTTTCTGCTCGTCTCCCG 60.179 60.000 0.00 0.00 38.13 5.14
261 262 0.892063 ACTCTTTCTGCTCGTCTCCC 59.108 55.000 0.00 0.00 0.00 4.30
262 263 1.135228 GGACTCTTTCTGCTCGTCTCC 60.135 57.143 0.00 0.00 0.00 3.71
263 264 1.466697 CGGACTCTTTCTGCTCGTCTC 60.467 57.143 0.00 0.00 0.00 3.36
264 265 0.523966 CGGACTCTTTCTGCTCGTCT 59.476 55.000 0.00 0.00 0.00 4.18
265 266 0.456995 CCGGACTCTTTCTGCTCGTC 60.457 60.000 0.00 0.00 0.00 4.20
266 267 1.179814 ACCGGACTCTTTCTGCTCGT 61.180 55.000 9.46 0.00 0.00 4.18
267 268 0.734253 CACCGGACTCTTTCTGCTCG 60.734 60.000 9.46 0.00 0.00 5.03
268 269 1.016653 GCACCGGACTCTTTCTGCTC 61.017 60.000 9.46 0.00 0.00 4.26
269 270 1.004440 GCACCGGACTCTTTCTGCT 60.004 57.895 9.46 0.00 0.00 4.24
270 271 2.383527 CGCACCGGACTCTTTCTGC 61.384 63.158 9.46 3.39 0.00 4.26
271 272 1.006102 ACGCACCGGACTCTTTCTG 60.006 57.895 9.46 0.00 0.00 3.02
272 273 1.006102 CACGCACCGGACTCTTTCT 60.006 57.895 9.46 0.00 0.00 2.52
273 274 1.006571 TCACGCACCGGACTCTTTC 60.007 57.895 9.46 0.00 0.00 2.62
274 275 1.006102 CTCACGCACCGGACTCTTT 60.006 57.895 9.46 0.00 0.00 2.52
275 276 2.651361 CTCACGCACCGGACTCTT 59.349 61.111 9.46 0.00 0.00 2.85
276 277 4.057428 GCTCACGCACCGGACTCT 62.057 66.667 9.46 0.00 35.78 3.24
277 278 2.697761 TAGCTCACGCACCGGACTC 61.698 63.158 9.46 0.00 39.10 3.36
278 279 2.675423 TAGCTCACGCACCGGACT 60.675 61.111 9.46 0.00 39.10 3.85
279 280 2.506438 GTAGCTCACGCACCGGAC 60.506 66.667 9.46 0.00 39.10 4.79
280 281 2.675423 AGTAGCTCACGCACCGGA 60.675 61.111 9.46 0.00 39.10 5.14
281 282 2.507102 CAGTAGCTCACGCACCGG 60.507 66.667 0.00 0.00 39.10 5.28
282 283 2.507102 CCAGTAGCTCACGCACCG 60.507 66.667 0.00 0.00 39.10 4.94
283 284 2.125512 CCCAGTAGCTCACGCACC 60.126 66.667 0.00 0.00 39.10 5.01
284 285 0.737715 CTTCCCAGTAGCTCACGCAC 60.738 60.000 0.00 0.00 39.10 5.34
285 286 0.898326 TCTTCCCAGTAGCTCACGCA 60.898 55.000 0.00 0.00 39.10 5.24
286 287 0.246635 TTCTTCCCAGTAGCTCACGC 59.753 55.000 0.00 0.00 0.00 5.34
287 288 1.404315 GGTTCTTCCCAGTAGCTCACG 60.404 57.143 0.00 0.00 0.00 4.35
288 289 1.623811 TGGTTCTTCCCAGTAGCTCAC 59.376 52.381 0.00 0.00 34.77 3.51
289 290 2.024176 TGGTTCTTCCCAGTAGCTCA 57.976 50.000 0.00 0.00 34.77 4.26
290 291 3.451178 TGTATGGTTCTTCCCAGTAGCTC 59.549 47.826 0.00 0.00 38.07 4.09
291 292 3.450904 TGTATGGTTCTTCCCAGTAGCT 58.549 45.455 0.00 0.00 38.07 3.32
292 293 3.906720 TGTATGGTTCTTCCCAGTAGC 57.093 47.619 0.00 0.00 38.07 3.58
293 294 4.181578 CGTTGTATGGTTCTTCCCAGTAG 58.818 47.826 0.00 0.00 38.07 2.57
294 295 3.579586 ACGTTGTATGGTTCTTCCCAGTA 59.420 43.478 0.00 0.00 38.07 2.74
295 296 2.370849 ACGTTGTATGGTTCTTCCCAGT 59.629 45.455 0.00 0.00 38.07 4.00
296 297 3.053831 ACGTTGTATGGTTCTTCCCAG 57.946 47.619 0.00 0.00 38.07 4.45
297 298 3.142951 CAACGTTGTATGGTTCTTCCCA 58.857 45.455 20.21 0.00 39.27 4.37
298 299 3.404899 TCAACGTTGTATGGTTCTTCCC 58.595 45.455 26.47 0.00 34.77 3.97
299 300 3.120304 GCTCAACGTTGTATGGTTCTTCC 60.120 47.826 26.47 2.41 0.00 3.46
300 301 3.746492 AGCTCAACGTTGTATGGTTCTTC 59.254 43.478 26.47 6.07 0.00 2.87
301 302 3.740115 AGCTCAACGTTGTATGGTTCTT 58.260 40.909 26.47 2.56 0.00 2.52
302 303 3.402628 AGCTCAACGTTGTATGGTTCT 57.597 42.857 26.47 11.59 0.00 3.01
303 304 3.496884 TCAAGCTCAACGTTGTATGGTTC 59.503 43.478 26.47 9.77 0.00 3.62
304 305 3.472652 TCAAGCTCAACGTTGTATGGTT 58.527 40.909 26.47 22.97 0.00 3.67
305 306 3.120321 TCAAGCTCAACGTTGTATGGT 57.880 42.857 26.47 19.26 0.00 3.55
306 307 4.466828 CTTTCAAGCTCAACGTTGTATGG 58.533 43.478 26.47 15.93 0.00 2.74
307 308 4.213270 TCCTTTCAAGCTCAACGTTGTATG 59.787 41.667 26.47 19.45 0.00 2.39
308 309 4.385825 TCCTTTCAAGCTCAACGTTGTAT 58.614 39.130 26.47 11.82 0.00 2.29
309 310 3.799366 TCCTTTCAAGCTCAACGTTGTA 58.201 40.909 26.47 13.16 0.00 2.41
310 311 2.639065 TCCTTTCAAGCTCAACGTTGT 58.361 42.857 26.47 6.11 0.00 3.32
311 312 3.065371 AGTTCCTTTCAAGCTCAACGTTG 59.935 43.478 22.35 22.35 0.00 4.10
312 313 3.279434 AGTTCCTTTCAAGCTCAACGTT 58.721 40.909 0.00 0.00 0.00 3.99
313 314 2.919228 AGTTCCTTTCAAGCTCAACGT 58.081 42.857 0.00 0.00 0.00 3.99
314 315 5.385617 CATTAGTTCCTTTCAAGCTCAACG 58.614 41.667 0.00 0.00 0.00 4.10
315 316 5.703876 CCATTAGTTCCTTTCAAGCTCAAC 58.296 41.667 0.00 0.00 0.00 3.18
316 317 4.218417 GCCATTAGTTCCTTTCAAGCTCAA 59.782 41.667 0.00 0.00 0.00 3.02
317 318 3.758554 GCCATTAGTTCCTTTCAAGCTCA 59.241 43.478 0.00 0.00 0.00 4.26
318 319 3.758554 TGCCATTAGTTCCTTTCAAGCTC 59.241 43.478 0.00 0.00 0.00 4.09
319 320 3.766545 TGCCATTAGTTCCTTTCAAGCT 58.233 40.909 0.00 0.00 0.00 3.74
320 321 4.725790 ATGCCATTAGTTCCTTTCAAGC 57.274 40.909 0.00 0.00 0.00 4.01
332 333 7.441017 AGAGCTCTTCTAACTAATGCCATTAG 58.559 38.462 20.31 20.31 40.24 1.73
333 334 7.288852 AGAGAGCTCTTCTAACTAATGCCATTA 59.711 37.037 19.36 0.00 36.31 1.90
334 335 6.099557 AGAGAGCTCTTCTAACTAATGCCATT 59.900 38.462 19.36 0.00 36.31 3.16
335 336 5.602145 AGAGAGCTCTTCTAACTAATGCCAT 59.398 40.000 19.36 0.00 36.31 4.40
336 337 4.959210 AGAGAGCTCTTCTAACTAATGCCA 59.041 41.667 19.36 0.00 36.31 4.92
337 338 5.528870 GAGAGAGCTCTTCTAACTAATGCC 58.471 45.833 19.36 0.00 40.61 4.40
338 339 5.212194 CGAGAGAGCTCTTCTAACTAATGC 58.788 45.833 19.36 0.00 40.61 3.56
339 340 5.212194 GCGAGAGAGCTCTTCTAACTAATG 58.788 45.833 19.36 4.80 40.61 1.90
340 341 4.884744 TGCGAGAGAGCTCTTCTAACTAAT 59.115 41.667 19.36 0.00 40.61 1.73
341 342 4.095185 GTGCGAGAGAGCTCTTCTAACTAA 59.905 45.833 19.36 0.00 40.61 2.24
342 343 3.623960 GTGCGAGAGAGCTCTTCTAACTA 59.376 47.826 19.36 0.00 40.61 2.24
343 344 2.422127 GTGCGAGAGAGCTCTTCTAACT 59.578 50.000 19.36 9.82 40.61 2.24
344 345 2.162608 TGTGCGAGAGAGCTCTTCTAAC 59.837 50.000 19.36 13.13 40.61 2.34
345 346 2.421775 CTGTGCGAGAGAGCTCTTCTAA 59.578 50.000 19.36 0.12 40.61 2.10
346 347 2.013400 CTGTGCGAGAGAGCTCTTCTA 58.987 52.381 19.36 6.65 40.61 2.10
347 348 0.810648 CTGTGCGAGAGAGCTCTTCT 59.189 55.000 19.36 15.83 40.61 2.85
348 349 0.179140 CCTGTGCGAGAGAGCTCTTC 60.179 60.000 19.36 15.40 40.61 2.87
349 350 1.603236 CCCTGTGCGAGAGAGCTCTT 61.603 60.000 19.36 7.93 40.61 2.85
350 351 2.051518 CCCTGTGCGAGAGAGCTCT 61.052 63.158 18.28 18.28 43.78 4.09
351 352 2.493973 CCCTGTGCGAGAGAGCTC 59.506 66.667 5.27 5.27 38.13 4.09
352 353 3.768922 GCCCTGTGCGAGAGAGCT 61.769 66.667 0.00 0.00 38.13 4.09
371 372 4.785453 CTGGGCAAGAGGTCCCGC 62.785 72.222 0.00 0.00 45.60 6.13
372 373 4.785453 GCTGGGCAAGAGGTCCCG 62.785 72.222 0.00 0.00 45.60 5.14
373 374 3.334054 AGCTGGGCAAGAGGTCCC 61.334 66.667 0.00 0.00 42.20 4.46
374 375 2.270527 GAGCTGGGCAAGAGGTCC 59.729 66.667 0.00 0.00 43.63 4.46
375 376 2.250741 GAGGAGCTGGGCAAGAGGTC 62.251 65.000 0.00 0.00 37.25 3.85
376 377 2.204059 AGGAGCTGGGCAAGAGGT 60.204 61.111 0.00 0.00 0.00 3.85
377 378 2.588989 GAGGAGCTGGGCAAGAGG 59.411 66.667 0.00 0.00 0.00 3.69
378 379 2.186384 CGAGGAGCTGGGCAAGAG 59.814 66.667 0.00 0.00 0.00 2.85
379 380 3.393970 CCGAGGAGCTGGGCAAGA 61.394 66.667 0.00 0.00 0.00 3.02
413 414 4.222847 CGAACGGGAGGCCCTAGC 62.223 72.222 0.00 0.00 42.67 3.42
414 415 2.441532 TCGAACGGGAGGCCCTAG 60.442 66.667 0.00 0.00 42.67 3.02
415 416 2.757099 GTCGAACGGGAGGCCCTA 60.757 66.667 0.00 0.00 42.67 3.53
416 417 4.698625 AGTCGAACGGGAGGCCCT 62.699 66.667 0.00 0.00 42.67 5.19
417 418 4.144703 GAGTCGAACGGGAGGCCC 62.145 72.222 0.00 0.00 41.09 5.80
418 419 4.144703 GGAGTCGAACGGGAGGCC 62.145 72.222 0.00 0.00 0.00 5.19
419 420 3.066233 GAGGAGTCGAACGGGAGGC 62.066 68.421 0.00 0.00 0.00 4.70
420 421 0.107312 TAGAGGAGTCGAACGGGAGG 60.107 60.000 0.00 0.00 0.00 4.30
421 422 1.604755 CATAGAGGAGTCGAACGGGAG 59.395 57.143 0.00 0.00 0.00 4.30
422 423 1.211212 TCATAGAGGAGTCGAACGGGA 59.789 52.381 0.00 0.00 0.00 5.14
423 424 1.604755 CTCATAGAGGAGTCGAACGGG 59.395 57.143 0.00 0.00 0.00 5.28
444 445 3.468140 GTCGGGGGACTAGGGCAC 61.468 72.222 0.00 0.00 0.00 5.01
447 448 2.832201 GACGTCGGGGGACTAGGG 60.832 72.222 0.00 0.00 0.00 3.53
448 449 1.823041 GAGACGTCGGGGGACTAGG 60.823 68.421 10.46 0.00 0.00 3.02
449 450 1.823041 GGAGACGTCGGGGGACTAG 60.823 68.421 10.46 0.00 0.00 2.57
450 451 2.273449 GGAGACGTCGGGGGACTA 59.727 66.667 10.46 0.00 0.00 2.59
451 452 3.975591 TGGAGACGTCGGGGGACT 61.976 66.667 10.46 0.00 0.00 3.85
452 453 3.756727 GTGGAGACGTCGGGGGAC 61.757 72.222 10.46 0.34 0.00 4.46
453 454 3.975591 AGTGGAGACGTCGGGGGA 61.976 66.667 10.46 0.00 0.00 4.81
454 455 3.760035 CAGTGGAGACGTCGGGGG 61.760 72.222 10.46 0.00 0.00 5.40
455 456 4.436998 GCAGTGGAGACGTCGGGG 62.437 72.222 10.46 0.00 0.00 5.73
456 457 1.384989 ATAGCAGTGGAGACGTCGGG 61.385 60.000 10.46 0.00 0.00 5.14
457 458 0.029567 GATAGCAGTGGAGACGTCGG 59.970 60.000 10.46 0.00 0.00 4.79
458 459 0.029567 GGATAGCAGTGGAGACGTCG 59.970 60.000 10.46 0.00 0.00 5.12
459 460 1.066303 CTGGATAGCAGTGGAGACGTC 59.934 57.143 7.70 7.70 0.00 4.34
460 461 1.107114 CTGGATAGCAGTGGAGACGT 58.893 55.000 0.00 0.00 0.00 4.34
461 462 1.107114 ACTGGATAGCAGTGGAGACG 58.893 55.000 0.00 0.00 0.00 4.18
462 463 2.497675 TGAACTGGATAGCAGTGGAGAC 59.502 50.000 0.00 0.00 32.56 3.36
463 464 2.497675 GTGAACTGGATAGCAGTGGAGA 59.502 50.000 0.00 0.00 32.56 3.71
464 465 2.736719 CGTGAACTGGATAGCAGTGGAG 60.737 54.545 0.00 0.00 32.56 3.86
465 466 1.204704 CGTGAACTGGATAGCAGTGGA 59.795 52.381 0.00 0.00 32.56 4.02
466 467 1.645034 CGTGAACTGGATAGCAGTGG 58.355 55.000 0.00 0.00 32.56 4.00
467 468 1.002366 GCGTGAACTGGATAGCAGTG 58.998 55.000 0.00 0.00 32.56 3.66
468 469 0.898320 AGCGTGAACTGGATAGCAGT 59.102 50.000 0.00 0.00 33.80 4.40
469 470 1.662629 CAAGCGTGAACTGGATAGCAG 59.337 52.381 0.00 0.00 0.00 4.24
470 471 1.275010 TCAAGCGTGAACTGGATAGCA 59.725 47.619 0.00 0.00 0.00 3.49
471 472 1.929836 CTCAAGCGTGAACTGGATAGC 59.070 52.381 3.39 0.00 31.88 2.97
472 473 1.929836 GCTCAAGCGTGAACTGGATAG 59.070 52.381 3.39 0.00 31.88 2.08
473 474 2.010145 GCTCAAGCGTGAACTGGATA 57.990 50.000 3.39 0.00 31.88 2.59
474 475 2.846371 GCTCAAGCGTGAACTGGAT 58.154 52.632 3.39 0.00 31.88 3.41
475 476 4.361253 GCTCAAGCGTGAACTGGA 57.639 55.556 3.39 0.00 31.88 3.86
485 486 2.514824 GGGATCCCACGCTCAAGC 60.515 66.667 26.95 0.00 35.81 4.01
486 487 2.989639 TGGGATCCCACGCTCAAG 59.010 61.111 30.62 0.00 41.89 3.02
494 495 0.253583 TGGAGATGGTTGGGATCCCA 60.254 55.000 30.62 30.62 45.63 4.37
495 496 0.183731 GTGGAGATGGTTGGGATCCC 59.816 60.000 25.22 25.22 0.00 3.85
496 497 0.183731 GGTGGAGATGGTTGGGATCC 59.816 60.000 1.92 1.92 0.00 3.36
497 498 0.179045 CGGTGGAGATGGTTGGGATC 60.179 60.000 0.00 0.00 0.00 3.36
498 499 0.914417 ACGGTGGAGATGGTTGGGAT 60.914 55.000 0.00 0.00 0.00 3.85
499 500 1.537889 ACGGTGGAGATGGTTGGGA 60.538 57.895 0.00 0.00 0.00 4.37
500 501 1.377202 CACGGTGGAGATGGTTGGG 60.377 63.158 0.00 0.00 0.00 4.12
501 502 0.253044 ATCACGGTGGAGATGGTTGG 59.747 55.000 8.50 0.00 0.00 3.77
502 503 1.372582 CATCACGGTGGAGATGGTTG 58.627 55.000 8.50 0.00 37.53 3.77
503 504 3.861341 CATCACGGTGGAGATGGTT 57.139 52.632 8.50 0.00 37.53 3.67
506 507 1.524621 GCCCATCACGGTGGAGATG 60.525 63.158 8.50 4.90 42.02 2.90
507 508 1.348008 ATGCCCATCACGGTGGAGAT 61.348 55.000 8.50 0.00 42.02 2.75
508 509 1.995066 ATGCCCATCACGGTGGAGA 60.995 57.895 8.50 0.00 42.02 3.71
509 510 1.820906 CATGCCCATCACGGTGGAG 60.821 63.158 8.50 1.11 42.02 3.86
510 511 1.846712 TTCATGCCCATCACGGTGGA 61.847 55.000 8.50 0.00 42.02 4.02
511 512 1.378382 TTCATGCCCATCACGGTGG 60.378 57.895 8.50 0.00 39.05 4.61
512 513 1.996786 GCTTCATGCCCATCACGGTG 61.997 60.000 0.56 0.56 35.15 4.94
513 514 1.750399 GCTTCATGCCCATCACGGT 60.750 57.895 0.00 0.00 35.15 4.83
514 515 2.827051 CGCTTCATGCCCATCACGG 61.827 63.158 0.00 0.00 38.78 4.94
515 516 2.711311 CGCTTCATGCCCATCACG 59.289 61.111 0.00 0.00 38.78 4.35
516 517 3.113745 CCGCTTCATGCCCATCAC 58.886 61.111 0.00 0.00 38.78 3.06
517 518 2.829914 GCCGCTTCATGCCCATCA 60.830 61.111 0.00 0.00 38.78 3.07
518 519 2.517875 AGCCGCTTCATGCCCATC 60.518 61.111 0.00 0.00 38.78 3.51
519 520 2.517875 GAGCCGCTTCATGCCCAT 60.518 61.111 0.00 0.00 38.78 4.00
520 521 4.802051 GGAGCCGCTTCATGCCCA 62.802 66.667 0.00 0.00 38.78 5.36
523 524 2.608970 TAAGGGGAGCCGCTTCATGC 62.609 60.000 20.34 0.00 45.83 4.06
524 525 0.815615 GTAAGGGGAGCCGCTTCATG 60.816 60.000 20.34 0.00 45.83 3.07
525 526 1.527370 GTAAGGGGAGCCGCTTCAT 59.473 57.895 20.34 2.17 45.83 2.57
526 527 2.666098 GGTAAGGGGAGCCGCTTCA 61.666 63.158 20.34 6.72 45.83 3.02
527 528 2.189784 GGTAAGGGGAGCCGCTTC 59.810 66.667 20.34 12.65 45.83 3.86
531 532 3.846430 GTCCGGTAAGGGGAGCCG 61.846 72.222 0.00 0.00 44.55 5.52
532 533 3.846430 CGTCCGGTAAGGGGAGCC 61.846 72.222 0.00 0.00 41.52 4.70
533 534 2.757099 TCGTCCGGTAAGGGGAGC 60.757 66.667 0.00 0.00 41.52 4.70
534 535 2.768492 CGTCGTCCGGTAAGGGGAG 61.768 68.421 0.00 0.00 41.52 4.30
535 536 2.751436 CGTCGTCCGGTAAGGGGA 60.751 66.667 0.00 0.00 41.52 4.81
536 537 4.503314 GCGTCGTCCGGTAAGGGG 62.503 72.222 0.00 0.00 41.52 4.79
537 538 4.503314 GGCGTCGTCCGGTAAGGG 62.503 72.222 0.00 0.00 41.52 3.95
538 539 2.879039 GAAGGCGTCGTCCGGTAAGG 62.879 65.000 0.00 0.00 42.97 2.69
539 540 1.515736 GAAGGCGTCGTCCGGTAAG 60.516 63.158 0.00 0.00 36.94 2.34
540 541 2.568090 GAAGGCGTCGTCCGGTAA 59.432 61.111 0.00 0.00 36.94 2.85
541 542 3.803082 CGAAGGCGTCGTCCGGTA 61.803 66.667 14.73 0.00 45.09 4.02
550 551 2.125512 GCATGAGGTCGAAGGCGT 60.126 61.111 0.00 0.00 38.98 5.68
551 552 2.125552 TGCATGAGGTCGAAGGCG 60.126 61.111 0.00 0.00 39.35 5.52
552 553 2.109126 GGTGCATGAGGTCGAAGGC 61.109 63.158 0.00 0.00 0.00 4.35
553 554 1.811266 CGGTGCATGAGGTCGAAGG 60.811 63.158 0.00 0.00 0.00 3.46
554 555 1.079819 ACGGTGCATGAGGTCGAAG 60.080 57.895 0.00 0.00 0.00 3.79
555 556 1.374125 CACGGTGCATGAGGTCGAA 60.374 57.895 0.00 0.00 0.00 3.71
556 557 1.604147 ATCACGGTGCATGAGGTCGA 61.604 55.000 2.51 0.00 0.00 4.20
557 558 1.153568 ATCACGGTGCATGAGGTCG 60.154 57.895 2.51 0.00 0.00 4.79
558 559 1.709147 GCATCACGGTGCATGAGGTC 61.709 60.000 18.43 3.85 44.43 3.85
559 560 1.746615 GCATCACGGTGCATGAGGT 60.747 57.895 18.43 0.00 44.43 3.85
560 561 3.104766 GCATCACGGTGCATGAGG 58.895 61.111 18.43 0.00 44.43 3.86
566 567 1.135315 GACATGTGCATCACGGTGC 59.865 57.895 1.15 0.00 45.25 5.01
567 568 0.954938 TGGACATGTGCATCACGGTG 60.955 55.000 16.89 0.56 37.14 4.94
568 569 0.955428 GTGGACATGTGCATCACGGT 60.955 55.000 23.52 0.00 37.14 4.83
569 570 1.796151 GTGGACATGTGCATCACGG 59.204 57.895 23.52 0.00 37.14 4.94
570 571 1.421093 CGTGGACATGTGCATCACG 59.579 57.895 23.52 20.72 43.58 4.35
571 572 1.135315 GCGTGGACATGTGCATCAC 59.865 57.895 23.52 11.83 32.40 3.06
572 573 2.039974 GGCGTGGACATGTGCATCA 61.040 57.895 23.52 3.63 32.40 3.07
573 574 2.793946 GGCGTGGACATGTGCATC 59.206 61.111 23.52 16.91 32.40 3.91
574 575 3.126879 CGGCGTGGACATGTGCAT 61.127 61.111 23.52 0.00 32.40 3.96
575 576 4.306967 TCGGCGTGGACATGTGCA 62.307 61.111 16.89 16.89 0.00 4.57
576 577 3.490759 CTCGGCGTGGACATGTGC 61.491 66.667 10.90 10.90 0.00 4.57
577 578 2.094659 GTCTCGGCGTGGACATGTG 61.095 63.158 22.60 0.00 33.19 3.21
578 579 2.261671 GTCTCGGCGTGGACATGT 59.738 61.111 22.60 0.00 33.19 3.21
579 580 1.807165 CAGTCTCGGCGTGGACATG 60.807 63.158 26.53 19.90 35.18 3.21
580 581 2.573869 CAGTCTCGGCGTGGACAT 59.426 61.111 26.53 15.08 35.18 3.06
581 582 4.357947 GCAGTCTCGGCGTGGACA 62.358 66.667 26.53 2.32 35.18 4.02
582 583 4.357947 TGCAGTCTCGGCGTGGAC 62.358 66.667 21.00 21.00 0.00 4.02
583 584 4.357947 GTGCAGTCTCGGCGTGGA 62.358 66.667 6.85 3.84 0.00 4.02
584 585 2.557059 TATGTGCAGTCTCGGCGTGG 62.557 60.000 6.85 1.09 0.00 4.94
585 586 0.735978 TTATGTGCAGTCTCGGCGTG 60.736 55.000 6.85 4.24 0.00 5.34
586 587 0.736325 GTTATGTGCAGTCTCGGCGT 60.736 55.000 6.85 0.00 0.00 5.68
587 588 0.735978 TGTTATGTGCAGTCTCGGCG 60.736 55.000 0.00 0.00 0.00 6.46
588 589 1.328680 CATGTTATGTGCAGTCTCGGC 59.671 52.381 0.00 0.00 0.00 5.54
589 590 2.621338 ACATGTTATGTGCAGTCTCGG 58.379 47.619 0.00 0.00 43.01 4.63
590 591 4.152223 TCAAACATGTTATGTGCAGTCTCG 59.848 41.667 12.39 0.00 44.07 4.04
591 592 5.611796 TCAAACATGTTATGTGCAGTCTC 57.388 39.130 12.39 0.00 44.07 3.36
592 593 7.686438 TTATCAAACATGTTATGTGCAGTCT 57.314 32.000 12.39 0.00 44.07 3.24
593 594 8.741101 TTTTATCAAACATGTTATGTGCAGTC 57.259 30.769 12.39 0.00 44.07 3.51
594 595 7.814107 CCTTTTATCAAACATGTTATGTGCAGT 59.186 33.333 12.39 0.00 44.07 4.40
595 596 7.201461 GCCTTTTATCAAACATGTTATGTGCAG 60.201 37.037 12.39 3.36 44.07 4.41
596 597 6.589523 GCCTTTTATCAAACATGTTATGTGCA 59.410 34.615 12.39 0.00 44.07 4.57
597 598 6.813152 AGCCTTTTATCAAACATGTTATGTGC 59.187 34.615 12.39 5.67 44.07 4.57
598 599 9.289303 GTAGCCTTTTATCAAACATGTTATGTG 57.711 33.333 12.39 6.97 44.07 3.21
600 601 9.853555 TTGTAGCCTTTTATCAAACATGTTATG 57.146 29.630 12.39 12.15 0.00 1.90
602 603 9.906660 CTTTGTAGCCTTTTATCAAACATGTTA 57.093 29.630 12.39 0.00 0.00 2.41
603 604 8.637986 TCTTTGTAGCCTTTTATCAAACATGTT 58.362 29.630 4.92 4.92 0.00 2.71
604 605 8.177119 TCTTTGTAGCCTTTTATCAAACATGT 57.823 30.769 0.00 0.00 0.00 3.21
605 606 9.474920 TTTCTTTGTAGCCTTTTATCAAACATG 57.525 29.630 0.00 0.00 0.00 3.21
606 607 9.696917 CTTTCTTTGTAGCCTTTTATCAAACAT 57.303 29.630 0.00 0.00 0.00 2.71
607 608 8.908903 TCTTTCTTTGTAGCCTTTTATCAAACA 58.091 29.630 0.00 0.00 0.00 2.83
608 609 9.744468 TTCTTTCTTTGTAGCCTTTTATCAAAC 57.256 29.630 0.00 0.00 0.00 2.93
610 611 9.965824 CTTTCTTTCTTTGTAGCCTTTTATCAA 57.034 29.630 0.00 0.00 0.00 2.57
611 612 9.349713 TCTTTCTTTCTTTGTAGCCTTTTATCA 57.650 29.630 0.00 0.00 0.00 2.15
615 616 9.719355 TTTTTCTTTCTTTCTTTGTAGCCTTTT 57.281 25.926 0.00 0.00 0.00 2.27
638 639 6.806668 TTTTGTTCCTCCTCCATTCTTTTT 57.193 33.333 0.00 0.00 0.00 1.94
639 640 6.611236 TCTTTTTGTTCCTCCTCCATTCTTTT 59.389 34.615 0.00 0.00 0.00 2.27
640 641 6.136155 TCTTTTTGTTCCTCCTCCATTCTTT 58.864 36.000 0.00 0.00 0.00 2.52
641 642 5.705400 TCTTTTTGTTCCTCCTCCATTCTT 58.295 37.500 0.00 0.00 0.00 2.52
642 643 5.324832 TCTTTTTGTTCCTCCTCCATTCT 57.675 39.130 0.00 0.00 0.00 2.40
643 644 5.536538 AGTTCTTTTTGTTCCTCCTCCATTC 59.463 40.000 0.00 0.00 0.00 2.67
644 645 5.458595 AGTTCTTTTTGTTCCTCCTCCATT 58.541 37.500 0.00 0.00 0.00 3.16
645 646 5.066913 AGTTCTTTTTGTTCCTCCTCCAT 57.933 39.130 0.00 0.00 0.00 3.41
646 647 4.519906 AGTTCTTTTTGTTCCTCCTCCA 57.480 40.909 0.00 0.00 0.00 3.86
647 648 5.622180 ACTAGTTCTTTTTGTTCCTCCTCC 58.378 41.667 0.00 0.00 0.00 4.30
648 649 6.289064 TGACTAGTTCTTTTTGTTCCTCCTC 58.711 40.000 0.00 0.00 0.00 3.71
649 650 6.248569 TGACTAGTTCTTTTTGTTCCTCCT 57.751 37.500 0.00 0.00 0.00 3.69
650 651 6.937436 TTGACTAGTTCTTTTTGTTCCTCC 57.063 37.500 0.00 0.00 0.00 4.30
652 653 8.515414 GCATATTGACTAGTTCTTTTTGTTCCT 58.485 33.333 0.00 0.00 0.00 3.36
653 654 7.755373 GGCATATTGACTAGTTCTTTTTGTTCC 59.245 37.037 0.00 0.00 0.00 3.62
654 655 8.515414 AGGCATATTGACTAGTTCTTTTTGTTC 58.485 33.333 0.00 0.00 30.85 3.18
655 656 8.409358 AGGCATATTGACTAGTTCTTTTTGTT 57.591 30.769 0.00 0.00 30.85 2.83
656 657 9.686683 ATAGGCATATTGACTAGTTCTTTTTGT 57.313 29.630 0.00 0.00 42.06 2.83
657 658 9.941664 CATAGGCATATTGACTAGTTCTTTTTG 57.058 33.333 0.00 0.00 42.06 2.44
658 659 9.686683 ACATAGGCATATTGACTAGTTCTTTTT 57.313 29.630 0.00 0.00 42.06 1.94
659 660 9.113838 CACATAGGCATATTGACTAGTTCTTTT 57.886 33.333 0.00 0.00 42.06 2.27
660 661 7.716998 CCACATAGGCATATTGACTAGTTCTTT 59.283 37.037 0.00 0.00 42.06 2.52
661 662 7.147479 ACCACATAGGCATATTGACTAGTTCTT 60.147 37.037 0.00 0.00 42.06 2.52
662 663 6.327626 ACCACATAGGCATATTGACTAGTTCT 59.672 38.462 0.00 0.00 42.06 3.01
663 664 6.525629 ACCACATAGGCATATTGACTAGTTC 58.474 40.000 0.00 0.00 42.06 3.01
664 665 6.500589 ACCACATAGGCATATTGACTAGTT 57.499 37.500 0.00 0.00 42.06 2.24
665 666 6.782988 ACTACCACATAGGCATATTGACTAGT 59.217 38.462 0.00 0.00 42.06 2.57
666 667 7.233389 ACTACCACATAGGCATATTGACTAG 57.767 40.000 0.00 0.00 42.06 2.57
667 668 7.612065 AACTACCACATAGGCATATTGACTA 57.388 36.000 0.00 0.00 43.12 2.59
668 669 6.500589 AACTACCACATAGGCATATTGACT 57.499 37.500 0.00 0.00 43.14 3.41
669 670 7.568199 AAAACTACCACATAGGCATATTGAC 57.432 36.000 0.00 0.00 43.14 3.18
693 694 2.951642 CTGTCAGGCTGAGTTGGAAAAA 59.048 45.455 19.38 0.00 0.00 1.94
694 695 2.575532 CTGTCAGGCTGAGTTGGAAAA 58.424 47.619 19.38 0.00 0.00 2.29
695 696 1.202806 CCTGTCAGGCTGAGTTGGAAA 60.203 52.381 19.38 0.00 0.00 3.13
696 697 0.397941 CCTGTCAGGCTGAGTTGGAA 59.602 55.000 19.38 0.00 0.00 3.53
697 698 0.764369 ACCTGTCAGGCTGAGTTGGA 60.764 55.000 26.77 8.14 39.63 3.53
698 699 0.604780 CACCTGTCAGGCTGAGTTGG 60.605 60.000 19.38 20.72 39.63 3.77
699 700 0.604780 CCACCTGTCAGGCTGAGTTG 60.605 60.000 19.38 11.94 39.63 3.16
700 701 1.757306 CCACCTGTCAGGCTGAGTT 59.243 57.895 19.38 0.00 39.63 3.01
701 702 2.219875 CCCACCTGTCAGGCTGAGT 61.220 63.158 19.38 9.91 39.63 3.41
702 703 2.667418 CCCACCTGTCAGGCTGAG 59.333 66.667 19.38 9.18 39.63 3.35
703 704 3.640407 GCCCACCTGTCAGGCTGA 61.640 66.667 19.40 14.43 43.62 4.26
704 705 4.729918 GGCCCACCTGTCAGGCTG 62.730 72.222 19.40 8.58 46.31 4.85
714 715 0.690762 TCTAACTGTTCAGGCCCACC 59.309 55.000 0.00 0.00 0.00 4.61
715 716 1.610886 GGTCTAACTGTTCAGGCCCAC 60.611 57.143 0.00 0.00 29.81 4.61
716 717 0.690762 GGTCTAACTGTTCAGGCCCA 59.309 55.000 0.00 0.00 29.81 5.36
717 718 0.391263 CGGTCTAACTGTTCAGGCCC 60.391 60.000 0.00 0.00 32.63 5.80
718 719 0.320697 ACGGTCTAACTGTTCAGGCC 59.679 55.000 0.00 0.00 32.95 5.19
719 720 1.000506 TGACGGTCTAACTGTTCAGGC 59.999 52.381 9.88 0.00 37.93 4.85
720 721 2.296471 ACTGACGGTCTAACTGTTCAGG 59.704 50.000 9.88 0.00 37.93 3.86
721 722 3.243434 ACACTGACGGTCTAACTGTTCAG 60.243 47.826 9.88 0.00 37.93 3.02
722 723 2.691526 ACACTGACGGTCTAACTGTTCA 59.308 45.455 9.88 0.00 37.93 3.18
723 724 3.366440 ACACTGACGGTCTAACTGTTC 57.634 47.619 9.88 0.00 37.93 3.18
724 725 3.814005 AACACTGACGGTCTAACTGTT 57.186 42.857 9.88 8.22 37.93 3.16
725 726 3.814005 AAACACTGACGGTCTAACTGT 57.186 42.857 9.88 2.74 41.12 3.55
766 767 1.338960 TGCACTTCTCATGGCATCGAA 60.339 47.619 0.00 2.74 0.00 3.71
767 768 0.249955 TGCACTTCTCATGGCATCGA 59.750 50.000 0.00 0.00 0.00 3.59
774 775 3.005554 AGAAATCGGTGCACTTCTCATG 58.994 45.455 17.98 0.00 0.00 3.07
775 776 3.340814 AGAAATCGGTGCACTTCTCAT 57.659 42.857 17.98 0.00 0.00 2.90
808 809 4.881273 ACCATTATGACGCAATTAGCAGAA 59.119 37.500 0.00 0.00 46.13 3.02
819 820 2.095853 CACAGAACCACCATTATGACGC 59.904 50.000 0.00 0.00 0.00 5.19
822 823 3.719268 AGCACAGAACCACCATTATGA 57.281 42.857 0.00 0.00 0.00 2.15
825 826 3.788227 AGAAGCACAGAACCACCATTA 57.212 42.857 0.00 0.00 0.00 1.90
830 834 4.574828 TGAAGTAAAGAAGCACAGAACCAC 59.425 41.667 0.00 0.00 0.00 4.16
844 848 9.658475 CTTCTAGATGTAGACGATGAAGTAAAG 57.342 37.037 0.00 0.00 34.84 1.85
867 871 5.881637 TTTTCGTAGCAAAAATGCACTTC 57.118 34.783 3.41 0.00 37.25 3.01
871 875 8.359060 ACTAAATTTTTCGTAGCAAAAATGCA 57.641 26.923 0.00 0.00 42.55 3.96
952 957 8.024285 TGGTGTGGATTACAATTTCGATTTAAC 58.976 33.333 0.00 0.00 41.89 2.01
955 960 6.208599 ACTGGTGTGGATTACAATTTCGATTT 59.791 34.615 0.00 0.00 41.89 2.17
1015 1020 1.680249 GGTGGGCTTAGAGGCTCTTTG 60.680 57.143 24.13 16.19 41.09 2.77
1016 1021 0.621082 GGTGGGCTTAGAGGCTCTTT 59.379 55.000 24.13 1.18 41.09 2.52
1056 1061 2.045885 TGGATTTAGTGGGAGGGAGAGT 59.954 50.000 0.00 0.00 0.00 3.24
1070 1075 8.343787 AGAATTTTCTGTAGGGGATTGGATTTA 58.656 33.333 0.00 0.00 35.89 1.40
1073 1078 6.161170 AGAGAATTTTCTGTAGGGGATTGGAT 59.839 38.462 0.00 0.00 37.73 3.41
1074 1079 5.492524 AGAGAATTTTCTGTAGGGGATTGGA 59.507 40.000 0.00 0.00 37.73 3.53
1076 1081 5.825151 GGAGAGAATTTTCTGTAGGGGATTG 59.175 44.000 2.71 0.00 37.73 2.67
1088 1093 3.459145 GGTAGAGCGGGAGAGAATTTTC 58.541 50.000 0.00 0.00 0.00 2.29
1098 1103 4.853142 ATGGCGGGTAGAGCGGGA 62.853 66.667 0.00 0.00 35.00 5.14
1102 1107 2.336809 CGAGATGGCGGGTAGAGC 59.663 66.667 0.00 0.00 0.00 4.09
1115 1120 0.894184 GGTGTGGTCTGGAGACGAGA 60.894 60.000 0.74 0.00 45.65 4.04
1573 1578 3.268103 AACGACCATGCCCCTCCAC 62.268 63.158 0.00 0.00 0.00 4.02
1612 1617 2.265182 GCCTGTGCTTAACCGCCAA 61.265 57.895 0.00 0.00 33.53 4.52
1686 1691 3.038788 TGCAACGCAGAATCTAGAACA 57.961 42.857 0.00 0.00 33.32 3.18
1764 1769 2.472909 GCCGTTCTGCATACAGCCC 61.473 63.158 0.00 0.00 44.10 5.19
1866 1871 3.491792 GGGCTAACTCTGTACAGATCTGC 60.492 52.174 25.35 23.00 36.76 4.26
2148 2153 4.612259 GCAGAACACAAGCTCACAATACAG 60.612 45.833 0.00 0.00 0.00 2.74
2229 2234 3.697045 GTGTGTCTGTATCTAGCCTCTGT 59.303 47.826 0.00 0.00 0.00 3.41
2298 2303 6.726490 TCAAATACATGGGTAGAGTACTCC 57.274 41.667 19.38 5.30 31.88 3.85
2385 2390 0.680618 CCAGTGCCTCAAAATGCCAA 59.319 50.000 0.00 0.00 0.00 4.52
2386 2391 0.178967 TCCAGTGCCTCAAAATGCCA 60.179 50.000 0.00 0.00 0.00 4.92
2387 2392 0.968405 TTCCAGTGCCTCAAAATGCC 59.032 50.000 0.00 0.00 0.00 4.40
2493 2498 3.004315 GCAGTTGCTTTGCCAGTAAACTA 59.996 43.478 0.00 0.00 38.21 2.24
2499 2504 0.754472 AATGCAGTTGCTTTGCCAGT 59.246 45.000 5.62 0.00 40.81 4.00
2520 2525 9.135189 TCAAGCAAACCATTTCTAATAGCATAT 57.865 29.630 0.00 0.00 0.00 1.78
2537 2542 6.072112 TCTTCAGTACCAAATCAAGCAAAC 57.928 37.500 0.00 0.00 0.00 2.93
2734 2739 4.319177 AGTGCTACAGAATCAGGTTGAAC 58.681 43.478 0.00 0.00 0.00 3.18
2811 2816 3.614092 TCTGATGAGAAAGCCATGAACC 58.386 45.455 0.00 0.00 0.00 3.62
2857 2862 1.134877 GTCTACCAGGGAACTAACCGC 60.135 57.143 0.00 0.00 40.21 5.68
3118 3123 7.363355 CCTGTACATGGTCTCCATCATATCTAC 60.363 44.444 0.00 0.00 43.15 2.59
3279 3284 2.936498 GTTCTTGTGTATACGGCATGCT 59.064 45.455 18.92 0.24 0.00 3.79
3303 3308 0.460811 CTGCAACCATAGCGAGCTCA 60.461 55.000 15.40 0.00 33.85 4.26
3408 3413 2.016096 GCTCTGACCTCCTTGGCATTC 61.016 57.143 0.00 0.00 40.22 2.67
3492 3497 2.110213 GCGGTGAAGGTGTGGACA 59.890 61.111 0.00 0.00 0.00 4.02
3513 3518 2.223363 CGCGTCTCTGTGTGTATGATCT 60.223 50.000 0.00 0.00 0.00 2.75
3659 3664 2.653115 CGAGCCTCTCACTGTGCA 59.347 61.111 2.12 0.00 0.00 4.57
3691 3696 0.738762 CCTGGACGTGTGCTGATCAG 60.739 60.000 18.84 18.84 0.00 2.90
3816 3821 5.500234 CCTCTGAAATGGTGGAATCTGTTA 58.500 41.667 0.00 0.00 0.00 2.41
3840 3845 1.841663 CGCCACAAGAACAAGACCCG 61.842 60.000 0.00 0.00 0.00 5.28
3843 3848 1.583054 AGTCGCCACAAGAACAAGAC 58.417 50.000 0.00 0.00 0.00 3.01
3852 3857 0.179234 TTCACCAGAAGTCGCCACAA 59.821 50.000 0.00 0.00 0.00 3.33
3891 3896 7.174253 ACAAGAGCAAACAATCCGTCTATTAAA 59.826 33.333 0.00 0.00 0.00 1.52
3895 3900 4.579869 ACAAGAGCAAACAATCCGTCTAT 58.420 39.130 0.00 0.00 0.00 1.98
3900 3905 2.032030 ACGAACAAGAGCAAACAATCCG 60.032 45.455 0.00 0.00 0.00 4.18
3920 3925 8.014322 TGATCTTGTAAATCTCACGTGTTTAC 57.986 34.615 23.24 23.24 38.28 2.01
3937 3942 2.695666 CTCCCCGATACACTGATCTTGT 59.304 50.000 5.93 5.93 0.00 3.16
3943 3948 1.688311 CCCTTCTCCCCGATACACTGA 60.688 57.143 0.00 0.00 0.00 3.41
3970 3975 8.154856 GCTTTATCCATCTTAACATGTACCCTA 58.845 37.037 0.00 0.00 0.00 3.53
3971 3976 6.998673 GCTTTATCCATCTTAACATGTACCCT 59.001 38.462 0.00 0.00 0.00 4.34
3974 3979 7.438459 AGACGCTTTATCCATCTTAACATGTAC 59.562 37.037 0.00 0.00 0.00 2.90
3976 3981 6.349300 AGACGCTTTATCCATCTTAACATGT 58.651 36.000 0.00 0.00 0.00 3.21
3982 3987 6.222038 AGTTGAGACGCTTTATCCATCTTA 57.778 37.500 0.00 0.00 0.00 2.10
4028 4034 7.957002 ACTCTCACGACCAGATCAATATAAAT 58.043 34.615 0.00 0.00 0.00 1.40
4092 4098 7.037586 TGTCTTTTATCTCCCTCCTGTAACATT 60.038 37.037 0.00 0.00 0.00 2.71
4111 4131 7.675962 TTGTTATGCCGTTACTATGTCTTTT 57.324 32.000 0.00 0.00 0.00 2.27
4151 4171 0.035439 CTTGGGTTACACGCCCTGAT 60.035 55.000 1.85 0.00 46.22 2.90
4210 4255 3.721021 AGGAAGTTCGGATTAAGGGAGA 58.279 45.455 0.00 0.00 0.00 3.71
4231 4276 9.095065 GAGGAATTCAAGCGTAATCTTAACTTA 57.905 33.333 7.93 0.00 0.00 2.24
4294 4339 5.302568 TGTTCATTCAAAGGATCAAGTTGCT 59.697 36.000 0.00 0.00 0.00 3.91
4336 4381 6.539173 TGTGAGGGAAAGAGTTGCTAATAAA 58.461 36.000 0.00 0.00 0.00 1.40
4368 4413 6.981722 AGAACCAAACACATAAAGATTGACC 58.018 36.000 0.00 0.00 0.00 4.02
4377 4422 5.781210 TCATGCAAGAACCAAACACATAA 57.219 34.783 0.00 0.00 0.00 1.90
4447 4492 1.073125 CACACACCAACCCCATGTCTA 59.927 52.381 0.00 0.00 0.00 2.59
4510 4616 1.846007 TGGTGTGCAAAGAAACAGGT 58.154 45.000 0.00 0.00 0.00 4.00
4565 4672 8.526978 GCATAGATGATAGAAGATCAACAGGTA 58.473 37.037 0.00 0.00 0.00 3.08
4598 4705 2.612212 GCGTTTTCTGACTTTGACTGGA 59.388 45.455 0.00 0.00 0.00 3.86
4606 4713 4.634443 ACTTGTTAGTGCGTTTTCTGACTT 59.366 37.500 0.00 0.00 31.99 3.01
4638 4745 6.560253 ATTGGCCTAATATTTAGCAAGTCG 57.440 37.500 3.32 0.00 0.00 4.18
4737 4844 8.915036 TCCTTTGCTGTAAATAAGGTTTGTTAA 58.085 29.630 0.00 0.00 38.59 2.01
4739 4846 7.354751 TCCTTTGCTGTAAATAAGGTTTGTT 57.645 32.000 0.00 0.00 38.59 2.83
4789 4896 1.723608 TTTGTGGGTGCGCTTCAGTG 61.724 55.000 9.73 0.00 0.00 3.66
4797 4904 0.738389 ACAGAAGTTTTGTGGGTGCG 59.262 50.000 0.00 0.00 0.00 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.