Multiple sequence alignment - TraesCS2D01G330400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G330400 chr2D 100.000 2501 0 0 1 2501 423289289 423286789 0.000000e+00 4619.0
1 TraesCS2D01G330400 chr2D 83.209 1477 136 50 35 1448 423305575 423304148 0.000000e+00 1251.0
2 TraesCS2D01G330400 chr2D 97.771 314 6 1 1987 2299 422077875 422077562 7.870000e-150 540.0
3 TraesCS2D01G330400 chr2D 84.302 516 46 16 1010 1510 423280356 423279861 2.910000e-129 472.0
4 TraesCS2D01G330400 chr2D 93.103 58 4 0 867 924 493086897 493086954 4.430000e-13 86.1
5 TraesCS2D01G330400 chr2B 81.976 1326 101 47 349 1608 496088534 496087281 0.000000e+00 998.0
6 TraesCS2D01G330400 chr2B 86.493 807 58 22 811 1581 496073737 496072946 0.000000e+00 839.0
7 TraesCS2D01G330400 chr2B 79.734 1278 149 39 1 1222 496214340 496213117 0.000000e+00 824.0
8 TraesCS2D01G330400 chr2B 83.011 724 61 21 823 1510 496512750 496512053 1.280000e-167 599.0
9 TraesCS2D01G330400 chr2B 81.586 782 81 30 773 1510 496351408 496350646 2.770000e-164 588.0
10 TraesCS2D01G330400 chr2B 81.586 782 81 30 773 1510 496355722 496354960 2.770000e-164 588.0
11 TraesCS2D01G330400 chr2B 81.330 782 83 30 773 1510 496353565 496352803 6.000000e-161 577.0
12 TraesCS2D01G330400 chr2B 89.549 421 29 7 1099 1510 496118205 496117791 1.030000e-143 520.0
13 TraesCS2D01G330400 chr2B 87.805 451 37 10 1010 1448 496078736 496078292 1.720000e-141 512.0
14 TraesCS2D01G330400 chr2B 83.824 544 74 7 1 535 496461858 496461320 2.870000e-139 505.0
15 TraesCS2D01G330400 chr2B 84.590 305 21 13 449 727 496074040 496073736 1.890000e-71 279.0
16 TraesCS2D01G330400 chr2B 80.726 358 49 8 1 340 496101419 496101064 6.860000e-66 261.0
17 TraesCS2D01G330400 chr2B 88.652 141 9 3 2361 2501 496198427 496198294 5.530000e-37 165.0
18 TraesCS2D01G330400 chr2B 91.304 69 6 0 2433 2501 496072741 496072673 7.360000e-16 95.3
19 TraesCS2D01G330400 chr2A 85.251 956 79 26 771 1675 565288082 565289026 0.000000e+00 928.0
20 TraesCS2D01G330400 chr2A 93.694 111 3 1 423 533 565287826 565287932 1.990000e-36 163.0
21 TraesCS2D01G330400 chr2A 89.720 107 11 0 621 727 565317786 565317892 1.210000e-28 137.0
22 TraesCS2D01G330400 chr2A 83.444 151 10 11 586 730 565287936 565288077 2.610000e-25 126.0
23 TraesCS2D01G330400 chr2A 97.561 41 1 0 1541 1581 565318551 565318591 1.240000e-08 71.3
24 TraesCS2D01G330400 chr5D 96.885 321 8 2 1987 2306 457014604 457014285 1.020000e-148 536.0
25 TraesCS2D01G330400 chr1D 96.835 316 9 1 1987 2301 4350803 4350488 6.130000e-146 527.0
26 TraesCS2D01G330400 chr1D 96.508 315 10 1 1987 2300 322927340 322927026 1.030000e-143 520.0
27 TraesCS2D01G330400 chr4A 94.704 321 14 2 1984 2301 441823693 441824013 1.730000e-136 496.0
28 TraesCS2D01G330400 chr4A 73.640 239 51 9 60 289 477793255 477793020 5.730000e-12 82.4
29 TraesCS2D01G330400 chr4D 94.637 317 15 2 1984 2299 57442315 57442630 8.040000e-135 490.0
30 TraesCS2D01G330400 chr5A 94.357 319 15 2 1984 2299 585565335 585565653 1.040000e-133 486.0
31 TraesCS2D01G330400 chr5A 94.545 55 3 0 1674 1728 13506788 13506734 4.430000e-13 86.1
32 TraesCS2D01G330400 chr3A 94.025 318 16 2 1987 2301 585641512 585641195 1.740000e-131 479.0
33 TraesCS2D01G330400 chr7B 90.312 320 28 2 1984 2300 558639263 558639582 1.380000e-112 416.0
34 TraesCS2D01G330400 chrUn 79.798 99 20 0 119 217 307584328 307584230 3.450000e-09 73.1
35 TraesCS2D01G330400 chrUn 79.798 99 20 0 119 217 307588471 307588373 3.450000e-09 73.1
36 TraesCS2D01G330400 chrUn 79.798 99 20 0 119 217 318416775 318416677 3.450000e-09 73.1
37 TraesCS2D01G330400 chr1A 97.143 35 1 0 161 195 513835218 513835252 2.690000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G330400 chr2D 423286789 423289289 2500 True 4619.000000 4619 100.000000 1 2501 1 chr2D.!!$R3 2500
1 TraesCS2D01G330400 chr2D 423304148 423305575 1427 True 1251.000000 1251 83.209000 35 1448 1 chr2D.!!$R4 1413
2 TraesCS2D01G330400 chr2B 496087281 496088534 1253 True 998.000000 998 81.976000 349 1608 1 chr2B.!!$R2 1259
3 TraesCS2D01G330400 chr2B 496213117 496214340 1223 True 824.000000 824 79.734000 1 1222 1 chr2B.!!$R6 1221
4 TraesCS2D01G330400 chr2B 496512053 496512750 697 True 599.000000 599 83.011000 823 1510 1 chr2B.!!$R8 687
5 TraesCS2D01G330400 chr2B 496350646 496355722 5076 True 584.333333 588 81.500667 773 1510 3 chr2B.!!$R10 737
6 TraesCS2D01G330400 chr2B 496461320 496461858 538 True 505.000000 505 83.824000 1 535 1 chr2B.!!$R7 534
7 TraesCS2D01G330400 chr2B 496072673 496074040 1367 True 404.433333 839 87.462333 449 2501 3 chr2B.!!$R9 2052
8 TraesCS2D01G330400 chr2A 565287826 565289026 1200 False 405.666667 928 87.463000 423 1675 3 chr2A.!!$F1 1252


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
143 153 0.107643 TTGTGGACTCGACATTGGCA 59.892 50.0 0.0 0.0 0.0 4.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2134 6650 0.033699 AAGGAATTCCAGCTCCTGCC 60.034 55.0 26.22 0.0 41.4 4.85 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 7.039722 ACATCTACCCCTTAAAGAAATTCCA 57.960 36.000 0.00 0.00 0.00 3.53
79 80 3.504906 ACCTTCTTGAAGACATCGTCGTA 59.495 43.478 11.53 0.00 37.67 3.43
112 113 2.203182 TCTGGGTTCCGGGTGAGT 59.797 61.111 0.00 0.00 0.00 3.41
135 145 3.138304 CCTTTGTTCATTGTGGACTCGA 58.862 45.455 0.00 0.00 0.00 4.04
138 148 3.401033 TGTTCATTGTGGACTCGACAT 57.599 42.857 0.00 0.00 0.00 3.06
143 153 0.107643 TTGTGGACTCGACATTGGCA 59.892 50.000 0.00 0.00 0.00 4.92
169 179 2.503895 AGCATTGTTCTCCTTCCTGG 57.496 50.000 0.00 0.00 37.10 4.45
177 187 2.856988 TCCTTCCTGGGGGCGTTT 60.857 61.111 0.00 0.00 36.20 3.60
232 242 5.295787 GTGGCGTTGTAATCAATTCCTCATA 59.704 40.000 0.00 0.00 35.92 2.15
256 266 1.746470 TTCTCTCGACGGCATAGTCA 58.254 50.000 0.00 0.00 40.98 3.41
258 268 0.733150 CTCTCGACGGCATAGTCACA 59.267 55.000 0.00 0.00 40.98 3.58
260 270 2.548480 CTCTCGACGGCATAGTCACATA 59.452 50.000 0.00 0.00 40.98 2.29
261 271 3.146847 TCTCGACGGCATAGTCACATAT 58.853 45.455 0.00 0.00 40.98 1.78
262 272 3.058224 TCTCGACGGCATAGTCACATATG 60.058 47.826 0.00 0.00 40.98 1.78
286 296 5.128827 GTCTTACATGGTCTGGTTATCCTCA 59.871 44.000 0.00 0.00 34.23 3.86
343 361 6.939627 TCGTTCGGTTGTTGCTTTATATATG 58.060 36.000 0.00 0.00 0.00 1.78
351 369 8.682710 GGTTGTTGCTTTATATATGAAACAGGA 58.317 33.333 8.77 0.00 32.64 3.86
369 387 6.927294 ACAGGATAAAAGCCTATTTCGAAG 57.073 37.500 0.00 0.00 33.51 3.79
410 428 1.064314 ACCAGTAGCTGATCGAGGACT 60.064 52.381 0.00 0.00 32.44 3.85
437 456 7.627939 GCTGATCAGTTGAATTTGAGCTATTGT 60.628 37.037 23.38 0.00 31.34 2.71
539 578 1.134965 CGTCTTCGGAGAAGCCAATCT 60.135 52.381 0.00 0.00 45.90 2.40
573 616 1.696832 GCGTCGTCCTGGAATTCAGC 61.697 60.000 7.93 0.00 42.05 4.26
618 672 1.840635 GTCTCTCCATGGGGTAGCTTT 59.159 52.381 12.53 0.00 34.93 3.51
625 679 1.136828 ATGGGGTAGCTTTGCCGATA 58.863 50.000 0.00 0.00 0.00 2.92
644 698 4.210120 CGATAGGAAAATTGAAGGAGAGCG 59.790 45.833 0.00 0.00 0.00 5.03
657 717 1.344458 GAGAGCGTGTGACTGTGATG 58.656 55.000 0.00 0.00 0.00 3.07
684 744 2.205074 CGCTTACATCTACTTGCCCAG 58.795 52.381 0.00 0.00 0.00 4.45
686 746 3.610911 GCTTACATCTACTTGCCCAGTT 58.389 45.455 0.00 0.00 36.88 3.16
712 778 5.395642 GCACTTGTCTTAGTCTACTCACTC 58.604 45.833 0.00 0.00 0.00 3.51
730 796 3.184683 CGAGCTCAACTGCCGCTC 61.185 66.667 15.40 0.00 44.98 5.03
734 804 1.144936 GCTCAACTGCCGCTCCTAT 59.855 57.895 0.00 0.00 0.00 2.57
786 862 4.461198 TCGCTCCTGATACTGATAACTCA 58.539 43.478 0.00 0.00 0.00 3.41
788 3021 4.979197 CGCTCCTGATACTGATAACTCAAC 59.021 45.833 0.00 0.00 0.00 3.18
867 3117 2.165030 CTCCACCAAATCATCACAAGCC 59.835 50.000 0.00 0.00 0.00 4.35
868 3118 1.894466 CCACCAAATCATCACAAGCCA 59.106 47.619 0.00 0.00 0.00 4.75
869 3119 2.353011 CCACCAAATCATCACAAGCCAC 60.353 50.000 0.00 0.00 0.00 5.01
907 3170 3.247173 GCCAAAGATCGATCAGTTGCTAG 59.753 47.826 26.47 16.40 0.00 3.42
908 3171 3.806521 CCAAAGATCGATCAGTTGCTAGG 59.193 47.826 26.47 13.01 0.00 3.02
940 5364 5.381757 TCTAGCCTACAACACCAACATTTT 58.618 37.500 0.00 0.00 0.00 1.82
943 5367 3.068873 GCCTACAACACCAACATTTTCCA 59.931 43.478 0.00 0.00 0.00 3.53
944 5368 4.442192 GCCTACAACACCAACATTTTCCAA 60.442 41.667 0.00 0.00 0.00 3.53
945 5369 5.741673 GCCTACAACACCAACATTTTCCAAT 60.742 40.000 0.00 0.00 0.00 3.16
946 5370 6.517529 GCCTACAACACCAACATTTTCCAATA 60.518 38.462 0.00 0.00 0.00 1.90
950 5374 7.957002 ACAACACCAACATTTTCCAATACATA 58.043 30.769 0.00 0.00 0.00 2.29
966 5390 8.593679 TCCAATACATAGAGTTTCTGTTTCTCA 58.406 33.333 0.00 0.00 0.00 3.27
970 5394 7.588143 ACATAGAGTTTCTGTTTCTCATTCG 57.412 36.000 0.00 0.00 0.00 3.34
979 5403 3.531538 TGTTTCTCATTCGTAGGCATCC 58.468 45.455 0.00 0.00 0.00 3.51
1085 5545 6.207614 AGCTATCGATACATTACTCTGAAGCA 59.792 38.462 0.00 0.00 0.00 3.91
1092 5552 4.645535 ACATTACTCTGAAGCAGAAGCAA 58.354 39.130 0.00 0.00 45.49 3.91
1093 5553 5.251764 ACATTACTCTGAAGCAGAAGCAAT 58.748 37.500 0.00 0.00 45.49 3.56
1108 5568 0.590195 GCAATCGACTGATCCATGGC 59.410 55.000 6.96 0.00 32.24 4.40
1109 5569 1.813092 GCAATCGACTGATCCATGGCT 60.813 52.381 6.96 0.00 32.24 4.75
1110 5570 2.569059 CAATCGACTGATCCATGGCTT 58.431 47.619 6.96 0.00 32.24 4.35
1113 5573 2.632377 TCGACTGATCCATGGCTTTTC 58.368 47.619 6.96 1.90 0.00 2.29
1123 5583 2.094338 CCATGGCTTTTCTTCTCCTTGC 60.094 50.000 0.00 0.00 0.00 4.01
1125 5589 2.508526 TGGCTTTTCTTCTCCTTGCTC 58.491 47.619 0.00 0.00 0.00 4.26
1150 5614 3.508762 CAGCAAAAGATTGTCATCCAGC 58.491 45.455 0.00 0.00 38.85 4.85
1192 5656 2.281484 GGGCCAAAGCACTGACGA 60.281 61.111 4.39 0.00 40.27 4.20
1512 6015 4.130118 GGACCATGTAATTGCCAGAGTAG 58.870 47.826 0.00 0.00 0.00 2.57
1533 6036 7.086376 AGTAGTTTAATTTTGTCAGCATGCAG 58.914 34.615 21.98 12.90 34.76 4.41
1602 6118 7.337942 TGGAAGAAATAAAAAGGAGAGAGATGC 59.662 37.037 0.00 0.00 0.00 3.91
1622 6138 2.416747 CCATTCTGTGACTTCGCTTGA 58.583 47.619 0.00 0.00 0.00 3.02
1630 6146 5.758296 TCTGTGACTTCGCTTGACTAATTTT 59.242 36.000 0.00 0.00 0.00 1.82
1634 6150 5.758296 TGACTTCGCTTGACTAATTTTCACT 59.242 36.000 0.00 0.00 0.00 3.41
1654 6170 7.416154 TCACTTAGAAATCAAGGTAAACACG 57.584 36.000 0.00 0.00 0.00 4.49
1664 6180 4.453136 TCAAGGTAAACACGAAGGTTATGC 59.547 41.667 0.00 0.00 30.78 3.14
1675 6191 5.957796 CACGAAGGTTATGCGAATCTTTTAC 59.042 40.000 0.00 0.00 0.00 2.01
1676 6192 5.873164 ACGAAGGTTATGCGAATCTTTTACT 59.127 36.000 0.00 0.00 0.00 2.24
1677 6193 6.035758 ACGAAGGTTATGCGAATCTTTTACTC 59.964 38.462 0.00 0.00 0.00 2.59
1678 6194 6.509677 CGAAGGTTATGCGAATCTTTTACTCC 60.510 42.308 0.00 0.00 0.00 3.85
1679 6195 5.123936 AGGTTATGCGAATCTTTTACTCCC 58.876 41.667 0.00 0.00 0.00 4.30
1680 6196 5.104485 AGGTTATGCGAATCTTTTACTCCCT 60.104 40.000 0.00 0.00 0.00 4.20
1681 6197 5.236695 GGTTATGCGAATCTTTTACTCCCTC 59.763 44.000 0.00 0.00 0.00 4.30
1682 6198 3.261981 TGCGAATCTTTTACTCCCTCC 57.738 47.619 0.00 0.00 0.00 4.30
1683 6199 2.202566 GCGAATCTTTTACTCCCTCCG 58.797 52.381 0.00 0.00 0.00 4.63
1684 6200 2.418334 GCGAATCTTTTACTCCCTCCGT 60.418 50.000 0.00 0.00 0.00 4.69
1685 6201 3.445857 CGAATCTTTTACTCCCTCCGTC 58.554 50.000 0.00 0.00 0.00 4.79
1686 6202 3.737355 CGAATCTTTTACTCCCTCCGTCC 60.737 52.174 0.00 0.00 0.00 4.79
1687 6203 2.617840 TCTTTTACTCCCTCCGTCCT 57.382 50.000 0.00 0.00 0.00 3.85
1688 6204 3.744940 TCTTTTACTCCCTCCGTCCTA 57.255 47.619 0.00 0.00 0.00 2.94
1689 6205 4.261411 TCTTTTACTCCCTCCGTCCTAT 57.739 45.455 0.00 0.00 0.00 2.57
1690 6206 5.393068 TCTTTTACTCCCTCCGTCCTATA 57.607 43.478 0.00 0.00 0.00 1.31
1691 6207 5.769835 TCTTTTACTCCCTCCGTCCTATAA 58.230 41.667 0.00 0.00 0.00 0.98
1692 6208 6.379579 TCTTTTACTCCCTCCGTCCTATAAT 58.620 40.000 0.00 0.00 0.00 1.28
1693 6209 7.529555 TCTTTTACTCCCTCCGTCCTATAATA 58.470 38.462 0.00 0.00 0.00 0.98
1694 6210 8.175431 TCTTTTACTCCCTCCGTCCTATAATAT 58.825 37.037 0.00 0.00 0.00 1.28
1695 6211 9.471702 CTTTTACTCCCTCCGTCCTATAATATA 57.528 37.037 0.00 0.00 0.00 0.86
1696 6212 9.827198 TTTTACTCCCTCCGTCCTATAATATAA 57.173 33.333 0.00 0.00 0.00 0.98
1700 6216 8.789782 ACTCCCTCCGTCCTATAATATAATAGT 58.210 37.037 0.00 0.00 0.00 2.12
1767 6283 0.456628 GCGGGAGTAGTTCTCAGTCC 59.543 60.000 0.00 0.00 44.40 3.85
1772 6288 2.093921 GGAGTAGTTCTCAGTCCCTTGC 60.094 54.545 0.00 0.00 44.40 4.01
1773 6289 2.829120 GAGTAGTTCTCAGTCCCTTGCT 59.171 50.000 0.00 0.00 42.34 3.91
1774 6290 3.243724 AGTAGTTCTCAGTCCCTTGCTT 58.756 45.455 0.00 0.00 0.00 3.91
1775 6291 3.648545 AGTAGTTCTCAGTCCCTTGCTTT 59.351 43.478 0.00 0.00 0.00 3.51
1776 6292 3.133141 AGTTCTCAGTCCCTTGCTTTC 57.867 47.619 0.00 0.00 0.00 2.62
1777 6293 2.708325 AGTTCTCAGTCCCTTGCTTTCT 59.292 45.455 0.00 0.00 0.00 2.52
1778 6294 3.137360 AGTTCTCAGTCCCTTGCTTTCTT 59.863 43.478 0.00 0.00 0.00 2.52
1779 6295 3.864789 TCTCAGTCCCTTGCTTTCTTT 57.135 42.857 0.00 0.00 0.00 2.52
1780 6296 4.170468 TCTCAGTCCCTTGCTTTCTTTT 57.830 40.909 0.00 0.00 0.00 2.27
1781 6297 3.885297 TCTCAGTCCCTTGCTTTCTTTTG 59.115 43.478 0.00 0.00 0.00 2.44
1782 6298 3.631250 TCAGTCCCTTGCTTTCTTTTGT 58.369 40.909 0.00 0.00 0.00 2.83
1783 6299 4.023291 TCAGTCCCTTGCTTTCTTTTGTT 58.977 39.130 0.00 0.00 0.00 2.83
1784 6300 4.097892 TCAGTCCCTTGCTTTCTTTTGTTC 59.902 41.667 0.00 0.00 0.00 3.18
1785 6301 4.098501 CAGTCCCTTGCTTTCTTTTGTTCT 59.901 41.667 0.00 0.00 0.00 3.01
1786 6302 4.711846 AGTCCCTTGCTTTCTTTTGTTCTT 59.288 37.500 0.00 0.00 0.00 2.52
1787 6303 5.187772 AGTCCCTTGCTTTCTTTTGTTCTTT 59.812 36.000 0.00 0.00 0.00 2.52
1788 6304 5.874810 GTCCCTTGCTTTCTTTTGTTCTTTT 59.125 36.000 0.00 0.00 0.00 2.27
1789 6305 6.371548 GTCCCTTGCTTTCTTTTGTTCTTTTT 59.628 34.615 0.00 0.00 0.00 1.94
1867 6383 6.679884 GCTGATGAGAAACAAAATCAGGGATC 60.680 42.308 12.12 0.00 44.02 3.36
1871 6387 5.942236 TGAGAAACAAAATCAGGGATCTCAG 59.058 40.000 0.00 0.00 37.67 3.35
1877 6393 1.786937 ATCAGGGATCTCAGTCGCTT 58.213 50.000 0.00 0.00 39.11 4.68
1883 6399 1.134848 GGATCTCAGTCGCTTGCTTCT 60.135 52.381 0.00 0.00 0.00 2.85
1884 6400 2.192624 GATCTCAGTCGCTTGCTTCTC 58.807 52.381 0.00 0.00 0.00 2.87
1885 6401 0.109551 TCTCAGTCGCTTGCTTCTCG 60.110 55.000 0.00 0.00 0.00 4.04
1886 6402 1.075425 CTCAGTCGCTTGCTTCTCGG 61.075 60.000 0.00 0.00 0.00 4.63
1887 6403 2.433318 AGTCGCTTGCTTCTCGGC 60.433 61.111 0.00 0.00 0.00 5.54
1896 6412 2.970639 CTTCTCGGCGAAGGGTGA 59.029 61.111 12.13 0.52 44.37 4.02
1897 6413 1.292223 CTTCTCGGCGAAGGGTGAA 59.708 57.895 12.13 9.66 44.37 3.18
1898 6414 0.737715 CTTCTCGGCGAAGGGTGAAG 60.738 60.000 17.58 17.58 44.37 3.02
1899 6415 1.469335 TTCTCGGCGAAGGGTGAAGT 61.469 55.000 12.13 0.00 0.00 3.01
1900 6416 0.609957 TCTCGGCGAAGGGTGAAGTA 60.610 55.000 12.13 0.00 0.00 2.24
1901 6417 0.458025 CTCGGCGAAGGGTGAAGTAC 60.458 60.000 12.13 0.00 0.00 2.73
1902 6418 1.804326 CGGCGAAGGGTGAAGTACG 60.804 63.158 0.00 0.00 0.00 3.67
1903 6419 1.291272 GGCGAAGGGTGAAGTACGT 59.709 57.895 0.00 0.00 0.00 3.57
1904 6420 0.527565 GGCGAAGGGTGAAGTACGTA 59.472 55.000 0.00 0.00 0.00 3.57
1905 6421 1.135721 GGCGAAGGGTGAAGTACGTAT 59.864 52.381 0.00 0.00 0.00 3.06
1906 6422 2.358898 GGCGAAGGGTGAAGTACGTATA 59.641 50.000 0.00 0.00 0.00 1.47
1907 6423 3.549625 GGCGAAGGGTGAAGTACGTATAG 60.550 52.174 0.00 0.00 0.00 1.31
1908 6424 3.313526 GCGAAGGGTGAAGTACGTATAGA 59.686 47.826 0.00 0.00 0.00 1.98
1909 6425 4.023365 GCGAAGGGTGAAGTACGTATAGAT 60.023 45.833 0.00 0.00 0.00 1.98
1910 6426 5.687828 CGAAGGGTGAAGTACGTATAGATC 58.312 45.833 0.00 0.00 0.00 2.75
1911 6427 5.237996 CGAAGGGTGAAGTACGTATAGATCA 59.762 44.000 0.00 0.00 0.00 2.92
1912 6428 6.566187 CGAAGGGTGAAGTACGTATAGATCAG 60.566 46.154 0.00 0.00 0.00 2.90
1913 6429 5.938279 AGGGTGAAGTACGTATAGATCAGA 58.062 41.667 0.00 0.00 0.00 3.27
1914 6430 6.544650 AGGGTGAAGTACGTATAGATCAGAT 58.455 40.000 0.00 0.00 0.00 2.90
1915 6431 6.431543 AGGGTGAAGTACGTATAGATCAGATG 59.568 42.308 0.00 0.00 0.00 2.90
1916 6432 6.207025 GGGTGAAGTACGTATAGATCAGATGT 59.793 42.308 0.00 0.00 0.00 3.06
1917 6433 7.078851 GGTGAAGTACGTATAGATCAGATGTG 58.921 42.308 0.00 0.00 0.00 3.21
1918 6434 7.078851 GTGAAGTACGTATAGATCAGATGTGG 58.921 42.308 0.00 0.00 0.00 4.17
1919 6435 6.996282 TGAAGTACGTATAGATCAGATGTGGA 59.004 38.462 0.00 0.00 0.00 4.02
1920 6436 7.665974 TGAAGTACGTATAGATCAGATGTGGAT 59.334 37.037 0.00 0.00 0.00 3.41
1921 6437 7.618502 AGTACGTATAGATCAGATGTGGATC 57.381 40.000 0.00 0.00 41.14 3.36
1922 6438 5.553290 ACGTATAGATCAGATGTGGATCG 57.447 43.478 0.00 0.00 44.58 3.69
1923 6439 4.396478 ACGTATAGATCAGATGTGGATCGG 59.604 45.833 0.00 0.00 44.58 4.18
1924 6440 4.201960 CGTATAGATCAGATGTGGATCGGG 60.202 50.000 0.00 0.00 44.58 5.14
1925 6441 1.346062 AGATCAGATGTGGATCGGGG 58.654 55.000 0.00 0.00 44.58 5.73
1926 6442 0.321122 GATCAGATGTGGATCGGGGC 60.321 60.000 0.00 0.00 32.62 5.80
1927 6443 0.765903 ATCAGATGTGGATCGGGGCT 60.766 55.000 0.00 0.00 33.34 5.19
1928 6444 0.982852 TCAGATGTGGATCGGGGCTT 60.983 55.000 0.00 0.00 33.34 4.35
1929 6445 0.533755 CAGATGTGGATCGGGGCTTC 60.534 60.000 0.00 0.00 33.34 3.86
1930 6446 1.595382 GATGTGGATCGGGGCTTCG 60.595 63.158 0.00 0.00 0.00 3.79
1931 6447 2.996168 GATGTGGATCGGGGCTTCGG 62.996 65.000 1.61 0.00 0.00 4.30
1932 6448 4.547367 GTGGATCGGGGCTTCGGG 62.547 72.222 1.61 0.00 0.00 5.14
1942 6458 3.818787 GCTTCGGGCCTGTGCATG 61.819 66.667 21.42 4.34 40.13 4.06
1943 6459 2.360350 CTTCGGGCCTGTGCATGT 60.360 61.111 12.43 0.00 40.13 3.21
1944 6460 2.672651 TTCGGGCCTGTGCATGTG 60.673 61.111 12.43 0.00 40.13 3.21
1949 6465 3.673484 GCCTGTGCATGTGCCGTT 61.673 61.111 2.07 0.00 41.18 4.44
1950 6466 3.041701 CCTGTGCATGTGCCGTTT 58.958 55.556 2.07 0.00 41.18 3.60
1951 6467 1.081242 CCTGTGCATGTGCCGTTTC 60.081 57.895 2.07 0.00 41.18 2.78
1955 6471 0.446222 GTGCATGTGCCGTTTCGTAT 59.554 50.000 2.07 0.00 41.18 3.06
1956 6472 0.724549 TGCATGTGCCGTTTCGTATC 59.275 50.000 2.07 0.00 41.18 2.24
1978 6494 3.824151 GTGAGGACGAGTAGAGTCAAAC 58.176 50.000 0.00 0.00 40.20 2.93
1979 6495 3.252701 GTGAGGACGAGTAGAGTCAAACA 59.747 47.826 0.00 0.00 40.20 2.83
1980 6496 4.079970 TGAGGACGAGTAGAGTCAAACAT 58.920 43.478 0.00 0.00 40.20 2.71
1981 6497 4.156190 TGAGGACGAGTAGAGTCAAACATC 59.844 45.833 0.00 0.00 40.20 3.06
1982 6498 4.079970 AGGACGAGTAGAGTCAAACATCA 58.920 43.478 0.00 0.00 40.20 3.07
1983 6499 4.082679 AGGACGAGTAGAGTCAAACATCAC 60.083 45.833 0.00 0.00 40.20 3.06
1984 6500 4.321008 GGACGAGTAGAGTCAAACATCACA 60.321 45.833 0.00 0.00 40.20 3.58
1985 6501 5.196341 ACGAGTAGAGTCAAACATCACAA 57.804 39.130 0.00 0.00 0.00 3.33
1986 6502 4.982916 ACGAGTAGAGTCAAACATCACAAC 59.017 41.667 0.00 0.00 0.00 3.32
1987 6503 5.221263 ACGAGTAGAGTCAAACATCACAACT 60.221 40.000 0.00 0.00 0.00 3.16
1988 6504 5.117745 CGAGTAGAGTCAAACATCACAACTG 59.882 44.000 0.00 0.00 0.00 3.16
1989 6505 6.161855 AGTAGAGTCAAACATCACAACTGA 57.838 37.500 0.00 0.00 0.00 3.41
1990 6506 6.763355 AGTAGAGTCAAACATCACAACTGAT 58.237 36.000 0.00 0.00 37.65 2.90
1991 6507 7.896811 AGTAGAGTCAAACATCACAACTGATA 58.103 34.615 0.00 0.00 35.17 2.15
1992 6508 8.367911 AGTAGAGTCAAACATCACAACTGATAA 58.632 33.333 0.00 0.00 35.17 1.75
1993 6509 7.664082 AGAGTCAAACATCACAACTGATAAG 57.336 36.000 0.00 0.00 35.17 1.73
1994 6510 7.445121 AGAGTCAAACATCACAACTGATAAGA 58.555 34.615 0.00 0.00 35.17 2.10
1995 6511 7.601886 AGAGTCAAACATCACAACTGATAAGAG 59.398 37.037 0.00 0.00 35.17 2.85
1996 6512 6.652481 AGTCAAACATCACAACTGATAAGAGG 59.348 38.462 0.00 0.00 35.17 3.69
1997 6513 6.650807 GTCAAACATCACAACTGATAAGAGGA 59.349 38.462 0.00 0.00 35.17 3.71
1998 6514 7.173218 GTCAAACATCACAACTGATAAGAGGAA 59.827 37.037 0.00 0.00 35.17 3.36
1999 6515 7.719193 TCAAACATCACAACTGATAAGAGGAAA 59.281 33.333 0.00 0.00 35.17 3.13
2000 6516 7.678947 AACATCACAACTGATAAGAGGAAAG 57.321 36.000 0.00 0.00 35.17 2.62
2001 6517 6.176183 ACATCACAACTGATAAGAGGAAAGG 58.824 40.000 0.00 0.00 35.17 3.11
2002 6518 6.013379 ACATCACAACTGATAAGAGGAAAGGA 60.013 38.462 0.00 0.00 35.17 3.36
2003 6519 6.042638 TCACAACTGATAAGAGGAAAGGAG 57.957 41.667 0.00 0.00 0.00 3.69
2004 6520 5.544176 TCACAACTGATAAGAGGAAAGGAGT 59.456 40.000 0.00 0.00 0.00 3.85
2005 6521 6.043243 TCACAACTGATAAGAGGAAAGGAGTT 59.957 38.462 0.00 0.00 0.00 3.01
2006 6522 6.370166 CACAACTGATAAGAGGAAAGGAGTTC 59.630 42.308 0.00 0.00 35.28 3.01
2007 6523 6.271159 ACAACTGATAAGAGGAAAGGAGTTCT 59.729 38.462 0.00 0.00 36.40 3.01
2008 6524 6.943899 ACTGATAAGAGGAAAGGAGTTCTT 57.056 37.500 0.00 0.00 36.40 2.52
2020 6536 6.661304 AAAGGAGTTCTTTCTTTGATGCAT 57.339 33.333 0.00 0.00 41.53 3.96
2021 6537 5.893897 AGGAGTTCTTTCTTTGATGCATC 57.106 39.130 20.14 20.14 0.00 3.91
2022 6538 5.568392 AGGAGTTCTTTCTTTGATGCATCT 58.432 37.500 26.32 2.26 0.00 2.90
2023 6539 6.715280 AGGAGTTCTTTCTTTGATGCATCTA 58.285 36.000 26.32 17.25 0.00 1.98
2024 6540 6.822676 AGGAGTTCTTTCTTTGATGCATCTAG 59.177 38.462 26.32 21.56 0.00 2.43
2025 6541 6.597280 GGAGTTCTTTCTTTGATGCATCTAGT 59.403 38.462 26.32 7.08 0.00 2.57
2026 6542 7.201600 GGAGTTCTTTCTTTGATGCATCTAGTC 60.202 40.741 26.32 13.93 0.00 2.59
2027 6543 7.393216 AGTTCTTTCTTTGATGCATCTAGTCT 58.607 34.615 26.32 12.78 0.00 3.24
2028 6544 7.548780 AGTTCTTTCTTTGATGCATCTAGTCTC 59.451 37.037 26.32 0.92 0.00 3.36
2029 6545 6.344500 TCTTTCTTTGATGCATCTAGTCTCC 58.656 40.000 26.32 0.00 0.00 3.71
2030 6546 5.946942 TTCTTTGATGCATCTAGTCTCCT 57.053 39.130 26.32 0.00 0.00 3.69
2031 6547 5.273674 TCTTTGATGCATCTAGTCTCCTG 57.726 43.478 26.32 7.49 0.00 3.86
2032 6548 4.100653 TCTTTGATGCATCTAGTCTCCTGG 59.899 45.833 26.32 6.21 0.00 4.45
2033 6549 2.323599 TGATGCATCTAGTCTCCTGGG 58.676 52.381 26.32 0.00 0.00 4.45
2034 6550 2.091111 TGATGCATCTAGTCTCCTGGGA 60.091 50.000 26.32 0.00 0.00 4.37
2035 6551 2.079170 TGCATCTAGTCTCCTGGGAG 57.921 55.000 10.19 10.19 43.21 4.30
2043 6559 3.057749 TCTCCTGGGAGATATGGCG 57.942 57.895 14.64 0.00 45.26 5.69
2044 6560 0.188587 TCTCCTGGGAGATATGGCGT 59.811 55.000 14.64 0.00 45.26 5.68
2045 6561 0.319728 CTCCTGGGAGATATGGCGTG 59.680 60.000 10.92 0.00 44.53 5.34
2046 6562 0.105709 TCCTGGGAGATATGGCGTGA 60.106 55.000 0.00 0.00 0.00 4.35
2047 6563 0.319728 CCTGGGAGATATGGCGTGAG 59.680 60.000 0.00 0.00 0.00 3.51
2059 6575 3.902063 CGTGAGCGCAATCGACGG 61.902 66.667 11.47 0.00 38.10 4.79
2060 6576 2.506217 GTGAGCGCAATCGACGGA 60.506 61.111 11.47 0.00 38.10 4.69
2061 6577 1.878522 GTGAGCGCAATCGACGGAT 60.879 57.895 11.47 0.00 38.10 4.18
2062 6578 1.153647 TGAGCGCAATCGACGGATT 60.154 52.632 11.47 0.00 43.62 3.01
2063 6579 0.739462 TGAGCGCAATCGACGGATTT 60.739 50.000 11.47 0.00 40.90 2.17
2064 6580 0.373716 GAGCGCAATCGACGGATTTT 59.626 50.000 11.47 0.00 40.90 1.82
2065 6581 0.802494 AGCGCAATCGACGGATTTTT 59.198 45.000 11.47 0.00 40.90 1.94
2066 6582 1.180166 GCGCAATCGACGGATTTTTC 58.820 50.000 0.30 0.00 40.90 2.29
2067 6583 1.465020 GCGCAATCGACGGATTTTTCA 60.465 47.619 0.30 0.00 40.90 2.69
2068 6584 2.430956 CGCAATCGACGGATTTTTCAG 58.569 47.619 0.00 0.00 40.90 3.02
2069 6585 2.785679 GCAATCGACGGATTTTTCAGG 58.214 47.619 0.00 0.00 40.90 3.86
2070 6586 2.418628 GCAATCGACGGATTTTTCAGGA 59.581 45.455 0.00 0.00 40.90 3.86
2071 6587 3.727970 GCAATCGACGGATTTTTCAGGAC 60.728 47.826 0.00 0.00 40.90 3.85
2072 6588 3.611766 ATCGACGGATTTTTCAGGACT 57.388 42.857 0.00 0.00 0.00 3.85
2073 6589 3.396260 TCGACGGATTTTTCAGGACTT 57.604 42.857 0.00 0.00 0.00 3.01
2074 6590 4.524316 TCGACGGATTTTTCAGGACTTA 57.476 40.909 0.00 0.00 0.00 2.24
2075 6591 4.240096 TCGACGGATTTTTCAGGACTTAC 58.760 43.478 0.00 0.00 0.00 2.34
2076 6592 3.060363 CGACGGATTTTTCAGGACTTACG 59.940 47.826 0.00 0.00 0.00 3.18
2077 6593 3.332034 ACGGATTTTTCAGGACTTACGG 58.668 45.455 0.00 0.00 0.00 4.02
2078 6594 3.007182 ACGGATTTTTCAGGACTTACGGA 59.993 43.478 0.00 0.00 0.00 4.69
2079 6595 4.189231 CGGATTTTTCAGGACTTACGGAT 58.811 43.478 0.00 0.00 0.00 4.18
2080 6596 4.034048 CGGATTTTTCAGGACTTACGGATG 59.966 45.833 0.00 0.00 0.00 3.51
2081 6597 4.335594 GGATTTTTCAGGACTTACGGATGG 59.664 45.833 0.00 0.00 0.00 3.51
2082 6598 4.627284 TTTTTCAGGACTTACGGATGGA 57.373 40.909 0.00 0.00 0.00 3.41
2083 6599 3.604875 TTTCAGGACTTACGGATGGAC 57.395 47.619 0.00 0.00 0.00 4.02
2084 6600 2.225382 TCAGGACTTACGGATGGACA 57.775 50.000 0.00 0.00 0.00 4.02
2085 6601 2.747177 TCAGGACTTACGGATGGACAT 58.253 47.619 0.00 0.00 0.00 3.06
2086 6602 2.430694 TCAGGACTTACGGATGGACATG 59.569 50.000 0.00 0.00 0.00 3.21
2087 6603 1.139058 AGGACTTACGGATGGACATGC 59.861 52.381 0.00 0.00 0.00 4.06
2088 6604 1.134521 GGACTTACGGATGGACATGCA 60.135 52.381 4.72 0.00 0.00 3.96
2089 6605 1.933853 GACTTACGGATGGACATGCAC 59.066 52.381 4.72 0.00 0.00 4.57
2090 6606 1.277842 ACTTACGGATGGACATGCACA 59.722 47.619 4.72 0.00 0.00 4.57
2091 6607 1.665679 CTTACGGATGGACATGCACAC 59.334 52.381 4.72 0.00 0.00 3.82
2092 6608 0.107897 TACGGATGGACATGCACACC 60.108 55.000 4.72 0.00 0.00 4.16
2093 6609 1.078214 CGGATGGACATGCACACCT 60.078 57.895 4.72 0.00 0.00 4.00
2094 6610 0.677731 CGGATGGACATGCACACCTT 60.678 55.000 4.72 0.00 0.00 3.50
2095 6611 1.098050 GGATGGACATGCACACCTTC 58.902 55.000 0.00 0.69 0.00 3.46
2096 6612 0.729116 GATGGACATGCACACCTTCG 59.271 55.000 0.00 0.00 0.00 3.79
2097 6613 0.036732 ATGGACATGCACACCTTCGT 59.963 50.000 0.00 0.00 0.00 3.85
2098 6614 0.884259 TGGACATGCACACCTTCGTG 60.884 55.000 0.00 0.00 46.11 4.35
2114 6630 1.853319 GTGCAACGACTGAAGGACG 59.147 57.895 0.00 0.00 0.00 4.79
2115 6631 0.596600 GTGCAACGACTGAAGGACGA 60.597 55.000 0.00 0.00 0.00 4.20
2116 6632 0.103390 TGCAACGACTGAAGGACGAA 59.897 50.000 0.00 0.00 0.00 3.85
2117 6633 1.214367 GCAACGACTGAAGGACGAAA 58.786 50.000 0.00 0.00 0.00 3.46
2118 6634 1.798813 GCAACGACTGAAGGACGAAAT 59.201 47.619 0.00 0.00 0.00 2.17
2119 6635 2.159827 GCAACGACTGAAGGACGAAATC 60.160 50.000 0.00 0.00 0.00 2.17
2120 6636 3.057019 CAACGACTGAAGGACGAAATCA 58.943 45.455 0.00 0.00 0.00 2.57
2121 6637 2.673833 ACGACTGAAGGACGAAATCAC 58.326 47.619 0.00 0.00 0.00 3.06
2122 6638 2.296471 ACGACTGAAGGACGAAATCACT 59.704 45.455 0.00 0.00 0.00 3.41
2123 6639 3.504906 ACGACTGAAGGACGAAATCACTA 59.495 43.478 0.00 0.00 0.00 2.74
2124 6640 4.158025 ACGACTGAAGGACGAAATCACTAT 59.842 41.667 0.00 0.00 0.00 2.12
2125 6641 5.356190 ACGACTGAAGGACGAAATCACTATA 59.644 40.000 0.00 0.00 0.00 1.31
2126 6642 6.039493 ACGACTGAAGGACGAAATCACTATAT 59.961 38.462 0.00 0.00 0.00 0.86
2127 6643 6.360947 CGACTGAAGGACGAAATCACTATATG 59.639 42.308 0.00 0.00 0.00 1.78
2128 6644 6.516718 ACTGAAGGACGAAATCACTATATGG 58.483 40.000 0.00 0.00 0.00 2.74
2129 6645 6.323996 ACTGAAGGACGAAATCACTATATGGA 59.676 38.462 0.00 0.00 0.00 3.41
2130 6646 7.119709 TGAAGGACGAAATCACTATATGGAA 57.880 36.000 0.00 0.00 0.00 3.53
2131 6647 6.984474 TGAAGGACGAAATCACTATATGGAAC 59.016 38.462 0.00 0.00 0.00 3.62
2143 6659 3.499406 TGGAACATGGCAGGAGCT 58.501 55.556 5.99 0.00 41.70 4.09
2144 6660 1.001764 TGGAACATGGCAGGAGCTG 60.002 57.895 5.99 0.00 41.70 4.24
2145 6661 1.751927 GGAACATGGCAGGAGCTGG 60.752 63.158 5.99 0.00 41.70 4.85
2146 6662 1.300963 GAACATGGCAGGAGCTGGA 59.699 57.895 5.99 0.00 41.70 3.86
2147 6663 0.322816 GAACATGGCAGGAGCTGGAA 60.323 55.000 5.99 0.00 41.70 3.53
2148 6664 0.333993 AACATGGCAGGAGCTGGAAT 59.666 50.000 5.99 0.00 41.70 3.01
2149 6665 0.333993 ACATGGCAGGAGCTGGAATT 59.666 50.000 5.99 0.00 41.70 2.17
2150 6666 1.030457 CATGGCAGGAGCTGGAATTC 58.970 55.000 0.00 0.00 41.70 2.17
2151 6667 0.106318 ATGGCAGGAGCTGGAATTCC 60.106 55.000 18.17 18.17 41.70 3.01
2152 6668 1.210204 TGGCAGGAGCTGGAATTCCT 61.210 55.000 24.73 5.15 44.59 3.36
2153 6669 0.033699 GGCAGGAGCTGGAATTCCTT 60.034 55.000 24.73 10.83 41.86 3.36
2154 6670 1.618074 GGCAGGAGCTGGAATTCCTTT 60.618 52.381 24.73 10.48 41.86 3.11
2155 6671 2.174360 GCAGGAGCTGGAATTCCTTTT 58.826 47.619 24.73 10.12 41.86 2.27
2156 6672 2.094338 GCAGGAGCTGGAATTCCTTTTG 60.094 50.000 24.73 14.48 41.86 2.44
2157 6673 3.424703 CAGGAGCTGGAATTCCTTTTGA 58.575 45.455 24.73 3.65 41.86 2.69
2158 6674 3.192212 CAGGAGCTGGAATTCCTTTTGAC 59.808 47.826 24.73 10.97 41.86 3.18
2159 6675 2.493675 GGAGCTGGAATTCCTTTTGACC 59.506 50.000 24.73 15.61 36.82 4.02
2160 6676 2.493675 GAGCTGGAATTCCTTTTGACCC 59.506 50.000 24.73 4.94 36.82 4.46
2161 6677 1.202348 GCTGGAATTCCTTTTGACCCG 59.798 52.381 24.73 4.08 36.82 5.28
2162 6678 1.818674 CTGGAATTCCTTTTGACCCGG 59.181 52.381 24.73 0.00 36.82 5.73
2163 6679 1.182667 GGAATTCCTTTTGACCCGGG 58.817 55.000 22.25 22.25 0.00 5.73
2164 6680 1.549265 GGAATTCCTTTTGACCCGGGT 60.549 52.381 30.81 30.81 0.00 5.28
2165 6681 2.244695 GAATTCCTTTTGACCCGGGTT 58.755 47.619 30.89 12.07 0.00 4.11
2166 6682 1.627864 ATTCCTTTTGACCCGGGTTG 58.372 50.000 30.89 15.23 0.00 3.77
2167 6683 0.551879 TTCCTTTTGACCCGGGTTGA 59.448 50.000 30.89 17.13 0.00 3.18
2168 6684 0.109723 TCCTTTTGACCCGGGTTGAG 59.890 55.000 30.89 21.33 0.00 3.02
2169 6685 0.893727 CCTTTTGACCCGGGTTGAGG 60.894 60.000 30.89 25.81 0.00 3.86
2170 6686 0.109723 CTTTTGACCCGGGTTGAGGA 59.890 55.000 30.89 12.34 0.00 3.71
2171 6687 0.179012 TTTTGACCCGGGTTGAGGAC 60.179 55.000 30.89 14.75 0.00 3.85
2181 6697 0.673985 GGTTGAGGACCCTTTTGTGC 59.326 55.000 0.00 0.00 43.06 4.57
2182 6698 1.398692 GTTGAGGACCCTTTTGTGCA 58.601 50.000 0.00 0.00 0.00 4.57
2183 6699 1.963515 GTTGAGGACCCTTTTGTGCAT 59.036 47.619 0.00 0.00 0.00 3.96
2184 6700 1.909700 TGAGGACCCTTTTGTGCATC 58.090 50.000 0.00 0.00 0.00 3.91
2185 6701 1.425066 TGAGGACCCTTTTGTGCATCT 59.575 47.619 0.00 0.00 0.00 2.90
2186 6702 2.158475 TGAGGACCCTTTTGTGCATCTT 60.158 45.455 0.00 0.00 0.00 2.40
2187 6703 2.893489 GAGGACCCTTTTGTGCATCTTT 59.107 45.455 0.00 0.00 0.00 2.52
2188 6704 3.308401 AGGACCCTTTTGTGCATCTTTT 58.692 40.909 0.00 0.00 0.00 2.27
2189 6705 3.711190 AGGACCCTTTTGTGCATCTTTTT 59.289 39.130 0.00 0.00 0.00 1.94
2214 6730 9.487790 TTTCCTTTTAATGGCATAGTTTCTTTG 57.512 29.630 0.00 0.00 0.00 2.77
2215 6731 8.415950 TCCTTTTAATGGCATAGTTTCTTTGA 57.584 30.769 0.00 0.00 0.00 2.69
2216 6732 9.034800 TCCTTTTAATGGCATAGTTTCTTTGAT 57.965 29.630 0.00 0.00 0.00 2.57
2217 6733 9.090692 CCTTTTAATGGCATAGTTTCTTTGATG 57.909 33.333 0.00 0.00 0.00 3.07
2218 6734 9.643693 CTTTTAATGGCATAGTTTCTTTGATGT 57.356 29.630 0.00 0.00 0.00 3.06
2219 6735 9.638239 TTTTAATGGCATAGTTTCTTTGATGTC 57.362 29.630 0.00 0.00 0.00 3.06
2220 6736 8.579850 TTAATGGCATAGTTTCTTTGATGTCT 57.420 30.769 0.00 0.00 0.00 3.41
2221 6737 7.472334 AATGGCATAGTTTCTTTGATGTCTT 57.528 32.000 0.00 0.00 0.00 3.01
2222 6738 6.899393 TGGCATAGTTTCTTTGATGTCTTT 57.101 33.333 0.00 0.00 0.00 2.52
2223 6739 6.680810 TGGCATAGTTTCTTTGATGTCTTTG 58.319 36.000 0.00 0.00 0.00 2.77
2224 6740 5.574443 GGCATAGTTTCTTTGATGTCTTTGC 59.426 40.000 0.00 0.00 32.32 3.68
2225 6741 5.574443 GCATAGTTTCTTTGATGTCTTTGCC 59.426 40.000 0.00 0.00 0.00 4.52
2226 6742 6.571150 GCATAGTTTCTTTGATGTCTTTGCCT 60.571 38.462 0.00 0.00 0.00 4.75
2227 6743 5.859205 AGTTTCTTTGATGTCTTTGCCTT 57.141 34.783 0.00 0.00 0.00 4.35
2228 6744 6.225981 AGTTTCTTTGATGTCTTTGCCTTT 57.774 33.333 0.00 0.00 0.00 3.11
2229 6745 6.643388 AGTTTCTTTGATGTCTTTGCCTTTT 58.357 32.000 0.00 0.00 0.00 2.27
2230 6746 7.105588 AGTTTCTTTGATGTCTTTGCCTTTTT 58.894 30.769 0.00 0.00 0.00 1.94
2231 6747 6.907206 TTCTTTGATGTCTTTGCCTTTTTG 57.093 33.333 0.00 0.00 0.00 2.44
2232 6748 5.358922 TCTTTGATGTCTTTGCCTTTTTGG 58.641 37.500 0.00 0.00 39.35 3.28
2241 6757 3.763671 CCTTTTTGGCGCTCCTGT 58.236 55.556 7.64 0.00 0.00 4.00
2242 6758 2.041153 CCTTTTTGGCGCTCCTGTT 58.959 52.632 7.64 0.00 0.00 3.16
2243 6759 1.243902 CCTTTTTGGCGCTCCTGTTA 58.756 50.000 7.64 0.00 0.00 2.41
2244 6760 1.068541 CCTTTTTGGCGCTCCTGTTAC 60.069 52.381 7.64 0.00 0.00 2.50
2245 6761 1.880027 CTTTTTGGCGCTCCTGTTACT 59.120 47.619 7.64 0.00 0.00 2.24
2246 6762 1.519408 TTTTGGCGCTCCTGTTACTC 58.481 50.000 7.64 0.00 0.00 2.59
2247 6763 0.685097 TTTGGCGCTCCTGTTACTCT 59.315 50.000 7.64 0.00 0.00 3.24
2248 6764 0.685097 TTGGCGCTCCTGTTACTCTT 59.315 50.000 7.64 0.00 0.00 2.85
2249 6765 0.685097 TGGCGCTCCTGTTACTCTTT 59.315 50.000 7.64 0.00 0.00 2.52
2250 6766 1.337823 TGGCGCTCCTGTTACTCTTTC 60.338 52.381 7.64 0.00 0.00 2.62
2251 6767 1.066787 GGCGCTCCTGTTACTCTTTCT 60.067 52.381 7.64 0.00 0.00 2.52
2252 6768 2.263945 GCGCTCCTGTTACTCTTTCTC 58.736 52.381 0.00 0.00 0.00 2.87
2253 6769 2.882324 CGCTCCTGTTACTCTTTCTCC 58.118 52.381 0.00 0.00 0.00 3.71
2254 6770 2.417515 CGCTCCTGTTACTCTTTCTCCC 60.418 54.545 0.00 0.00 0.00 4.30
2255 6771 2.835156 GCTCCTGTTACTCTTTCTCCCT 59.165 50.000 0.00 0.00 0.00 4.20
2256 6772 3.368948 GCTCCTGTTACTCTTTCTCCCTG 60.369 52.174 0.00 0.00 0.00 4.45
2257 6773 4.090090 CTCCTGTTACTCTTTCTCCCTGA 58.910 47.826 0.00 0.00 0.00 3.86
2258 6774 4.689062 TCCTGTTACTCTTTCTCCCTGAT 58.311 43.478 0.00 0.00 0.00 2.90
2259 6775 4.712337 TCCTGTTACTCTTTCTCCCTGATC 59.288 45.833 0.00 0.00 0.00 2.92
2260 6776 4.467795 CCTGTTACTCTTTCTCCCTGATCA 59.532 45.833 0.00 0.00 0.00 2.92
2261 6777 5.046304 CCTGTTACTCTTTCTCCCTGATCAA 60.046 44.000 0.00 0.00 0.00 2.57
2262 6778 6.352565 CCTGTTACTCTTTCTCCCTGATCAAT 60.353 42.308 0.00 0.00 0.00 2.57
2263 6779 6.409704 TGTTACTCTTTCTCCCTGATCAATG 58.590 40.000 0.00 0.00 0.00 2.82
2264 6780 6.213397 TGTTACTCTTTCTCCCTGATCAATGA 59.787 38.462 0.00 0.00 0.00 2.57
2265 6781 5.768980 ACTCTTTCTCCCTGATCAATGAA 57.231 39.130 0.00 0.00 0.00 2.57
2266 6782 6.324601 ACTCTTTCTCCCTGATCAATGAAT 57.675 37.500 0.00 0.00 0.00 2.57
2267 6783 6.729428 ACTCTTTCTCCCTGATCAATGAATT 58.271 36.000 0.00 0.00 0.00 2.17
2268 6784 7.180663 ACTCTTTCTCCCTGATCAATGAATTT 58.819 34.615 0.00 0.00 0.00 1.82
2269 6785 7.122353 ACTCTTTCTCCCTGATCAATGAATTTG 59.878 37.037 0.00 0.00 36.61 2.32
2270 6786 6.379133 TCTTTCTCCCTGATCAATGAATTTGG 59.621 38.462 0.00 0.00 35.92 3.28
2271 6787 5.197224 TCTCCCTGATCAATGAATTTGGT 57.803 39.130 0.00 0.00 35.92 3.67
2272 6788 6.325993 TCTCCCTGATCAATGAATTTGGTA 57.674 37.500 0.00 0.00 35.92 3.25
2273 6789 6.359804 TCTCCCTGATCAATGAATTTGGTAG 58.640 40.000 0.00 0.00 35.92 3.18
2274 6790 6.158520 TCTCCCTGATCAATGAATTTGGTAGA 59.841 38.462 0.00 0.00 35.92 2.59
2275 6791 6.914665 TCCCTGATCAATGAATTTGGTAGAT 58.085 36.000 0.00 0.00 35.92 1.98
2276 6792 7.000472 TCCCTGATCAATGAATTTGGTAGATC 59.000 38.462 0.00 0.00 35.92 2.75
2277 6793 6.774170 CCCTGATCAATGAATTTGGTAGATCA 59.226 38.462 0.00 0.00 35.92 2.92
2278 6794 7.286087 CCCTGATCAATGAATTTGGTAGATCAA 59.714 37.037 0.00 0.00 35.92 2.57
2279 6795 8.133627 CCTGATCAATGAATTTGGTAGATCAAC 58.866 37.037 0.00 0.00 35.92 3.18
2280 6796 8.812513 TGATCAATGAATTTGGTAGATCAACT 57.187 30.769 0.00 0.00 35.92 3.16
2281 6797 9.904198 TGATCAATGAATTTGGTAGATCAACTA 57.096 29.630 0.00 0.00 35.92 2.24
2321 6837 7.724305 AAAACATCACAACTGATAGTACGTT 57.276 32.000 0.00 0.00 35.17 3.99
2336 6852 1.298340 CGTTGGCCCCACATAGTGA 59.702 57.895 0.00 0.00 35.23 3.41
2337 6853 1.024579 CGTTGGCCCCACATAGTGAC 61.025 60.000 0.00 0.00 35.23 3.67
2340 6856 0.615261 TGGCCCCACATAGTGACGTA 60.615 55.000 0.00 0.00 35.23 3.57
2341 6857 0.756903 GGCCCCACATAGTGACGTAT 59.243 55.000 0.00 0.00 35.23 3.06
2342 6858 1.965643 GGCCCCACATAGTGACGTATA 59.034 52.381 0.00 0.00 35.23 1.47
2343 6859 2.565834 GGCCCCACATAGTGACGTATAT 59.434 50.000 0.00 0.00 35.23 0.86
2396 6912 8.956533 TTTAGATGAACCAAATCATACGATGA 57.043 30.769 0.00 0.00 40.08 2.92
2411 6927 8.947055 TCATACGATGATTGGGTGATAATATG 57.053 34.615 0.00 0.00 33.59 1.78
2412 6928 7.986889 TCATACGATGATTGGGTGATAATATGG 59.013 37.037 0.00 0.00 33.59 2.74
2413 6929 5.500234 ACGATGATTGGGTGATAATATGGG 58.500 41.667 0.00 0.00 0.00 4.00
2414 6930 5.014123 ACGATGATTGGGTGATAATATGGGT 59.986 40.000 0.00 0.00 0.00 4.51
2415 6931 5.945784 CGATGATTGGGTGATAATATGGGTT 59.054 40.000 0.00 0.00 0.00 4.11
2416 6932 6.127925 CGATGATTGGGTGATAATATGGGTTG 60.128 42.308 0.00 0.00 0.00 3.77
2417 6933 6.024563 TGATTGGGTGATAATATGGGTTGT 57.975 37.500 0.00 0.00 0.00 3.32
2418 6934 7.155442 TGATTGGGTGATAATATGGGTTGTA 57.845 36.000 0.00 0.00 0.00 2.41
2419 6935 7.764617 TGATTGGGTGATAATATGGGTTGTAT 58.235 34.615 0.00 0.00 0.00 2.29
2420 6936 8.895624 TGATTGGGTGATAATATGGGTTGTATA 58.104 33.333 0.00 0.00 0.00 1.47
2421 6937 9.920946 GATTGGGTGATAATATGGGTTGTATAT 57.079 33.333 0.00 0.00 0.00 0.86
2424 6940 8.479689 TGGGTGATAATATGGGTTGTATATACG 58.520 37.037 8.33 0.00 0.00 3.06
2425 6941 7.440255 GGGTGATAATATGGGTTGTATATACGC 59.560 40.741 8.33 3.92 0.00 4.42
2426 6942 7.168637 GGTGATAATATGGGTTGTATATACGCG 59.831 40.741 3.53 3.53 0.00 6.01
2427 6943 7.703621 GTGATAATATGGGTTGTATATACGCGT 59.296 37.037 19.17 19.17 0.00 6.01
2428 6944 8.252417 TGATAATATGGGTTGTATATACGCGTT 58.748 33.333 20.78 8.23 0.00 4.84
2429 6945 9.734620 GATAATATGGGTTGTATATACGCGTTA 57.265 33.333 20.78 10.44 0.00 3.18
2430 6946 7.816945 AATATGGGTTGTATATACGCGTTAC 57.183 36.000 20.78 15.17 0.00 2.50
2431 6947 4.916983 TGGGTTGTATATACGCGTTACT 57.083 40.909 20.78 5.37 0.00 2.24
2439 6955 6.205784 TGTATATACGCGTTACTGTAAACCC 58.794 40.000 20.78 0.00 0.00 4.11
2458 6974 2.230992 CCCGCAAATGGAAATGAACAGA 59.769 45.455 0.00 0.00 0.00 3.41
2461 6977 3.916172 CGCAAATGGAAATGAACAGACAG 59.084 43.478 0.00 0.00 0.00 3.51
2465 6981 6.684686 CAAATGGAAATGAACAGACAGACAT 58.315 36.000 0.00 0.00 0.00 3.06
2469 6985 6.768483 TGGAAATGAACAGACAGACATTCTA 58.232 36.000 0.00 0.00 32.84 2.10
2470 6986 6.650807 TGGAAATGAACAGACAGACATTCTAC 59.349 38.462 0.00 0.00 32.84 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 7.131069 AGGATGGAATTTCTTTAAGGGGTAGAT 59.869 37.037 0.00 0.00 0.00 1.98
33 34 2.767960 GGCCATCAACAATTCCAAGGAT 59.232 45.455 0.00 0.00 0.00 3.24
79 80 0.600557 CAGACACGAAGAGGAGCACT 59.399 55.000 0.00 0.00 0.00 4.40
112 113 4.062293 CGAGTCCACAATGAACAAAGGTA 58.938 43.478 0.00 0.00 0.00 3.08
143 153 8.928542 CCAGGAAGGAGAACAATGCTAAACATT 61.929 40.741 0.00 0.00 45.15 2.71
155 165 2.231380 GCCCCCAGGAAGGAGAACA 61.231 63.158 0.00 0.00 41.22 3.18
169 179 1.792118 AAGCTTCACGAAAACGCCCC 61.792 55.000 0.00 0.00 0.00 5.80
177 187 5.394883 CCCTATAACACCTAAGCTTCACGAA 60.395 44.000 0.00 0.00 0.00 3.85
232 242 1.591703 TGCCGTCGAGAGAAAGCAT 59.408 52.632 0.00 0.00 43.08 3.79
256 266 5.957771 ACCAGACCATGTAAGACATATGT 57.042 39.130 8.43 8.43 36.53 2.29
258 268 7.514127 AGGATAACCAGACCATGTAAGACATAT 59.486 37.037 0.00 0.00 36.14 1.78
260 270 5.667626 AGGATAACCAGACCATGTAAGACAT 59.332 40.000 0.00 0.00 37.77 3.06
261 271 5.030147 AGGATAACCAGACCATGTAAGACA 58.970 41.667 0.00 0.00 38.94 3.41
262 272 5.128827 TGAGGATAACCAGACCATGTAAGAC 59.871 44.000 0.00 0.00 38.94 3.01
291 301 5.128827 ACACGGTACAAGATGATGAGGTAAT 59.871 40.000 0.00 0.00 0.00 1.89
303 313 3.606846 CGAACGAAGTACACGGTACAAGA 60.607 47.826 14.78 0.00 45.00 3.02
305 315 2.604373 CCGAACGAAGTACACGGTACAA 60.604 50.000 14.78 0.00 45.00 2.41
392 410 1.268999 GCAGTCCTCGATCAGCTACTG 60.269 57.143 4.91 4.91 37.53 2.74
410 428 4.077108 AGCTCAAATTCAACTGATCAGCA 58.923 39.130 22.83 4.03 0.00 4.41
437 456 9.384764 TGAAACGACAAAATACATACATGGATA 57.615 29.630 0.00 0.00 29.25 2.59
539 578 2.195096 CGACGCGACCCAATTATTGTA 58.805 47.619 15.93 0.00 0.00 2.41
573 616 6.525121 TTAAACAATGACTTGTGACGAGAG 57.475 37.500 6.88 0.00 44.83 3.20
618 672 4.080582 TCTCCTTCAATTTTCCTATCGGCA 60.081 41.667 0.00 0.00 0.00 5.69
625 679 3.077359 CACGCTCTCCTTCAATTTTCCT 58.923 45.455 0.00 0.00 0.00 3.36
634 688 0.315568 ACAGTCACACGCTCTCCTTC 59.684 55.000 0.00 0.00 0.00 3.46
644 698 1.702886 CGTCCTCATCACAGTCACAC 58.297 55.000 0.00 0.00 0.00 3.82
657 717 1.334243 AGTAGATGTAAGCGCGTCCTC 59.666 52.381 8.43 0.00 0.00 3.71
684 744 3.127425 AGACTAAGACAAGTGCCCAAC 57.873 47.619 0.00 0.00 0.00 3.77
686 746 3.507411 AGTAGACTAAGACAAGTGCCCA 58.493 45.455 0.00 0.00 0.00 5.36
712 778 4.749310 AGCGGCAGTTGAGCTCGG 62.749 66.667 9.64 0.00 36.33 4.63
762 832 6.238648 TGAGTTATCAGTATCAGGAGCGATA 58.761 40.000 0.00 0.00 0.00 2.92
786 862 0.398318 GGTGTGGGAGCAGAGAAGTT 59.602 55.000 0.00 0.00 0.00 2.66
788 3021 1.298014 GGGTGTGGGAGCAGAGAAG 59.702 63.158 0.00 0.00 0.00 2.85
867 3117 2.005451 GGCAGATGCAAGTGTCTAGTG 58.995 52.381 7.19 0.00 44.36 2.74
868 3118 1.625315 TGGCAGATGCAAGTGTCTAGT 59.375 47.619 7.19 0.00 44.36 2.57
869 3119 2.391616 TGGCAGATGCAAGTGTCTAG 57.608 50.000 7.19 0.00 44.36 2.43
907 3170 2.999331 TGTAGGCTAGAATGGTTTGCC 58.001 47.619 0.00 0.00 43.52 4.52
908 3171 3.756434 TGTTGTAGGCTAGAATGGTTTGC 59.244 43.478 7.42 0.00 0.00 3.68
925 5349 6.227298 TGTATTGGAAAATGTTGGTGTTGT 57.773 33.333 0.00 0.00 0.00 3.32
940 5364 8.593679 TGAGAAACAGAAACTCTATGTATTGGA 58.406 33.333 0.00 0.00 0.00 3.53
944 5368 9.307121 CGAATGAGAAACAGAAACTCTATGTAT 57.693 33.333 0.00 0.00 0.00 2.29
945 5369 8.304596 ACGAATGAGAAACAGAAACTCTATGTA 58.695 33.333 0.00 0.00 0.00 2.29
946 5370 7.155328 ACGAATGAGAAACAGAAACTCTATGT 58.845 34.615 0.00 0.00 0.00 2.29
950 5374 6.159988 CCTACGAATGAGAAACAGAAACTCT 58.840 40.000 0.00 0.00 0.00 3.24
966 5390 1.668419 GTTGCTGGATGCCTACGAAT 58.332 50.000 0.00 0.00 42.00 3.34
970 5394 1.453928 GGGGTTGCTGGATGCCTAC 60.454 63.158 0.00 0.00 42.00 3.18
979 5403 2.913578 TTGCTGCTGGGGTTGCTG 60.914 61.111 0.00 0.00 0.00 4.41
985 5409 3.458163 CATGGCTTGCTGCTGGGG 61.458 66.667 0.00 0.00 42.39 4.96
1007 5432 3.442273 AGAAGTCTAGGAGCAGAAACTCG 59.558 47.826 0.00 0.00 37.57 4.18
1085 5545 3.464907 CATGGATCAGTCGATTGCTTCT 58.535 45.455 2.51 0.00 29.66 2.85
1092 5552 3.118112 AGAAAAGCCATGGATCAGTCGAT 60.118 43.478 18.40 0.00 33.31 3.59
1093 5553 2.237143 AGAAAAGCCATGGATCAGTCGA 59.763 45.455 18.40 0.00 0.00 4.20
1108 5568 4.158020 GCAAGAGCAAGGAGAAGAAAAG 57.842 45.455 0.00 0.00 41.58 2.27
1123 5583 4.233123 TGACAATCTTTTGCTGCAAGAG 57.767 40.909 22.76 22.76 36.22 2.85
1125 5589 3.924686 GGATGACAATCTTTTGCTGCAAG 59.075 43.478 15.39 5.04 36.22 4.01
1323 5787 1.065199 TCCTCCACCTTGATGATGTGC 60.065 52.381 0.00 0.00 0.00 4.57
1512 6015 4.949756 GCTGCATGCTGACAAAATTAAAC 58.050 39.130 26.71 2.11 38.95 2.01
1538 6041 8.991243 ACACGTGTACATGTAACTATGTAAAT 57.009 30.769 21.98 0.00 43.11 1.40
1545 6055 9.642327 ATCAATAAACACGTGTACATGTAACTA 57.358 29.630 23.69 11.47 0.00 2.24
1602 6118 2.158449 GTCAAGCGAAGTCACAGAATGG 59.842 50.000 0.00 0.00 43.62 3.16
1630 6146 7.211573 TCGTGTTTACCTTGATTTCTAAGTGA 58.788 34.615 0.00 0.00 0.00 3.41
1634 6150 6.993902 ACCTTCGTGTTTACCTTGATTTCTAA 59.006 34.615 0.00 0.00 0.00 2.10
1647 6163 5.172934 AGATTCGCATAACCTTCGTGTTTA 58.827 37.500 0.00 0.00 0.00 2.01
1652 6168 5.873164 AGTAAAAGATTCGCATAACCTTCGT 59.127 36.000 0.00 0.00 0.00 3.85
1654 6170 6.238402 GGGAGTAAAAGATTCGCATAACCTTC 60.238 42.308 0.00 0.00 0.00 3.46
1664 6180 3.445857 GACGGAGGGAGTAAAAGATTCG 58.554 50.000 0.00 0.00 0.00 3.34
1741 6257 3.135994 GAGAACTACTCCCGCACAAAAA 58.864 45.455 0.00 0.00 39.53 1.94
1742 6258 2.103432 TGAGAACTACTCCCGCACAAAA 59.897 45.455 0.00 0.00 44.34 2.44
1743 6259 1.689813 TGAGAACTACTCCCGCACAAA 59.310 47.619 0.00 0.00 44.34 2.83
1744 6260 1.272490 CTGAGAACTACTCCCGCACAA 59.728 52.381 0.00 0.00 44.34 3.33
1745 6261 0.888619 CTGAGAACTACTCCCGCACA 59.111 55.000 0.00 0.00 44.34 4.57
1746 6262 0.889306 ACTGAGAACTACTCCCGCAC 59.111 55.000 0.00 0.00 44.34 5.34
1747 6263 1.174783 GACTGAGAACTACTCCCGCA 58.825 55.000 0.00 0.00 44.34 5.69
1748 6264 0.456628 GGACTGAGAACTACTCCCGC 59.543 60.000 0.00 0.00 44.34 6.13
1749 6265 1.104630 GGGACTGAGAACTACTCCCG 58.895 60.000 0.00 0.00 44.34 5.14
1750 6266 2.498078 CAAGGGACTGAGAACTACTCCC 59.502 54.545 0.00 0.00 44.34 4.30
1751 6267 2.093921 GCAAGGGACTGAGAACTACTCC 60.094 54.545 0.00 0.00 44.34 3.85
1752 6268 2.829120 AGCAAGGGACTGAGAACTACTC 59.171 50.000 0.00 0.00 40.86 2.59
1753 6269 2.896039 AGCAAGGGACTGAGAACTACT 58.104 47.619 0.00 0.00 40.86 2.57
1754 6270 3.686916 AAGCAAGGGACTGAGAACTAC 57.313 47.619 0.00 0.00 40.86 2.73
1755 6271 3.904339 AGAAAGCAAGGGACTGAGAACTA 59.096 43.478 0.00 0.00 40.86 2.24
1824 6340 9.654663 CTCATCAGCTTCTAAATGATATGATGA 57.345 33.333 12.43 12.43 41.10 2.92
1825 6341 9.654663 TCTCATCAGCTTCTAAATGATATGATG 57.345 33.333 5.67 5.67 38.81 3.07
1829 6345 9.842775 TGTTTCTCATCAGCTTCTAAATGATAT 57.157 29.630 0.00 0.00 32.51 1.63
1830 6346 9.671279 TTGTTTCTCATCAGCTTCTAAATGATA 57.329 29.630 0.00 0.00 32.51 2.15
1831 6347 8.571461 TTGTTTCTCATCAGCTTCTAAATGAT 57.429 30.769 0.00 0.00 34.02 2.45
1832 6348 7.984422 TTGTTTCTCATCAGCTTCTAAATGA 57.016 32.000 0.00 0.00 0.00 2.57
1833 6349 9.635520 ATTTTGTTTCTCATCAGCTTCTAAATG 57.364 29.630 0.00 0.00 0.00 2.32
1834 6350 9.852091 GATTTTGTTTCTCATCAGCTTCTAAAT 57.148 29.630 0.00 0.00 0.00 1.40
1835 6351 8.849168 TGATTTTGTTTCTCATCAGCTTCTAAA 58.151 29.630 0.00 0.00 0.00 1.85
1836 6352 8.394971 TGATTTTGTTTCTCATCAGCTTCTAA 57.605 30.769 0.00 0.00 0.00 2.10
1837 6353 7.120285 CCTGATTTTGTTTCTCATCAGCTTCTA 59.880 37.037 2.97 0.00 35.49 2.10
1838 6354 6.072064 CCTGATTTTGTTTCTCATCAGCTTCT 60.072 38.462 2.97 0.00 35.49 2.85
1839 6355 6.091437 CCTGATTTTGTTTCTCATCAGCTTC 58.909 40.000 2.97 0.00 35.49 3.86
1840 6356 5.047519 CCCTGATTTTGTTTCTCATCAGCTT 60.048 40.000 2.97 0.00 35.49 3.74
1841 6357 4.461781 CCCTGATTTTGTTTCTCATCAGCT 59.538 41.667 2.97 0.00 35.49 4.24
1842 6358 4.460382 TCCCTGATTTTGTTTCTCATCAGC 59.540 41.667 2.97 0.00 35.49 4.26
1843 6359 6.602406 AGATCCCTGATTTTGTTTCTCATCAG 59.398 38.462 0.00 0.00 36.29 2.90
1844 6360 6.487828 AGATCCCTGATTTTGTTTCTCATCA 58.512 36.000 0.00 0.00 0.00 3.07
1845 6361 6.600822 TGAGATCCCTGATTTTGTTTCTCATC 59.399 38.462 0.00 0.00 34.89 2.92
1846 6362 6.487828 TGAGATCCCTGATTTTGTTTCTCAT 58.512 36.000 0.00 0.00 34.89 2.90
1847 6363 5.879763 TGAGATCCCTGATTTTGTTTCTCA 58.120 37.500 0.00 0.00 36.83 3.27
1848 6364 5.942826 ACTGAGATCCCTGATTTTGTTTCTC 59.057 40.000 0.00 0.00 0.00 2.87
1867 6383 1.075425 CCGAGAAGCAAGCGACTGAG 61.075 60.000 0.00 0.00 0.00 3.35
1883 6399 1.588082 GTACTTCACCCTTCGCCGA 59.412 57.895 0.00 0.00 0.00 5.54
1884 6400 1.804326 CGTACTTCACCCTTCGCCG 60.804 63.158 0.00 0.00 0.00 6.46
1885 6401 0.527565 TACGTACTTCACCCTTCGCC 59.472 55.000 0.00 0.00 0.00 5.54
1886 6402 2.573941 ATACGTACTTCACCCTTCGC 57.426 50.000 0.00 0.00 0.00 4.70
1887 6403 5.237996 TGATCTATACGTACTTCACCCTTCG 59.762 44.000 0.00 0.00 0.00 3.79
1888 6404 6.485984 TCTGATCTATACGTACTTCACCCTTC 59.514 42.308 0.00 0.00 0.00 3.46
1889 6405 6.363065 TCTGATCTATACGTACTTCACCCTT 58.637 40.000 0.00 0.00 0.00 3.95
1890 6406 5.938279 TCTGATCTATACGTACTTCACCCT 58.062 41.667 0.00 0.00 0.00 4.34
1891 6407 6.207025 ACATCTGATCTATACGTACTTCACCC 59.793 42.308 0.00 0.00 0.00 4.61
1892 6408 7.078851 CACATCTGATCTATACGTACTTCACC 58.921 42.308 0.00 0.00 0.00 4.02
1893 6409 7.041303 TCCACATCTGATCTATACGTACTTCAC 60.041 40.741 0.00 0.00 0.00 3.18
1894 6410 6.996282 TCCACATCTGATCTATACGTACTTCA 59.004 38.462 0.00 0.00 0.00 3.02
1895 6411 7.436430 TCCACATCTGATCTATACGTACTTC 57.564 40.000 0.00 0.00 0.00 3.01
1896 6412 7.148390 CGATCCACATCTGATCTATACGTACTT 60.148 40.741 0.00 0.00 37.15 2.24
1897 6413 6.314152 CGATCCACATCTGATCTATACGTACT 59.686 42.308 0.00 0.00 37.15 2.73
1898 6414 6.457122 CCGATCCACATCTGATCTATACGTAC 60.457 46.154 0.00 0.00 37.15 3.67
1899 6415 5.585047 CCGATCCACATCTGATCTATACGTA 59.415 44.000 0.00 0.00 37.15 3.57
1900 6416 4.396478 CCGATCCACATCTGATCTATACGT 59.604 45.833 0.00 0.00 37.15 3.57
1901 6417 4.201960 CCCGATCCACATCTGATCTATACG 60.202 50.000 0.00 0.00 37.15 3.06
1902 6418 4.098654 CCCCGATCCACATCTGATCTATAC 59.901 50.000 0.00 0.00 37.15 1.47
1903 6419 4.281657 CCCCGATCCACATCTGATCTATA 58.718 47.826 0.00 0.00 37.15 1.31
1904 6420 3.102972 CCCCGATCCACATCTGATCTAT 58.897 50.000 0.00 0.00 37.15 1.98
1905 6421 2.529632 CCCCGATCCACATCTGATCTA 58.470 52.381 0.00 0.00 37.15 1.98
1906 6422 1.346062 CCCCGATCCACATCTGATCT 58.654 55.000 0.00 0.00 37.15 2.75
1907 6423 0.321122 GCCCCGATCCACATCTGATC 60.321 60.000 0.00 0.00 36.18 2.92
1908 6424 0.765903 AGCCCCGATCCACATCTGAT 60.766 55.000 0.00 0.00 0.00 2.90
1909 6425 0.982852 AAGCCCCGATCCACATCTGA 60.983 55.000 0.00 0.00 0.00 3.27
1910 6426 0.533755 GAAGCCCCGATCCACATCTG 60.534 60.000 0.00 0.00 0.00 2.90
1911 6427 1.832912 GAAGCCCCGATCCACATCT 59.167 57.895 0.00 0.00 0.00 2.90
1912 6428 1.595382 CGAAGCCCCGATCCACATC 60.595 63.158 0.00 0.00 0.00 3.06
1913 6429 2.505982 CGAAGCCCCGATCCACAT 59.494 61.111 0.00 0.00 0.00 3.21
1914 6430 3.781307 CCGAAGCCCCGATCCACA 61.781 66.667 0.00 0.00 0.00 4.17
1915 6431 4.547367 CCCGAAGCCCCGATCCAC 62.547 72.222 0.00 0.00 0.00 4.02
1925 6441 3.818787 CATGCACAGGCCCGAAGC 61.819 66.667 0.00 0.00 40.13 3.86
1926 6442 2.360350 ACATGCACAGGCCCGAAG 60.360 61.111 0.00 0.00 40.13 3.79
1927 6443 2.672651 CACATGCACAGGCCCGAA 60.673 61.111 0.00 0.00 40.13 4.30
1932 6448 3.211564 AAACGGCACATGCACAGGC 62.212 57.895 6.15 0.00 44.36 4.85
1933 6449 1.081242 GAAACGGCACATGCACAGG 60.081 57.895 6.15 0.00 44.36 4.00
1934 6450 1.440850 CGAAACGGCACATGCACAG 60.441 57.895 6.15 0.00 44.36 3.66
1935 6451 0.880718 TACGAAACGGCACATGCACA 60.881 50.000 6.15 0.00 44.36 4.57
1936 6452 0.446222 ATACGAAACGGCACATGCAC 59.554 50.000 6.15 0.00 44.36 4.57
1937 6453 0.724549 GATACGAAACGGCACATGCA 59.275 50.000 6.15 0.00 44.36 3.96
1938 6454 0.315059 CGATACGAAACGGCACATGC 60.315 55.000 0.00 0.00 41.14 4.06
1939 6455 0.996462 ACGATACGAAACGGCACATG 59.004 50.000 0.00 0.00 0.00 3.21
1940 6456 0.996462 CACGATACGAAACGGCACAT 59.004 50.000 0.00 0.00 0.00 3.21
1941 6457 0.039346 TCACGATACGAAACGGCACA 60.039 50.000 0.00 0.00 0.00 4.57
1942 6458 0.638746 CTCACGATACGAAACGGCAC 59.361 55.000 0.00 0.00 0.00 5.01
1943 6459 0.457166 CCTCACGATACGAAACGGCA 60.457 55.000 0.00 0.00 0.00 5.69
1944 6460 0.179156 TCCTCACGATACGAAACGGC 60.179 55.000 0.00 0.00 0.00 5.68
1945 6461 1.542544 GTCCTCACGATACGAAACGG 58.457 55.000 0.00 0.00 0.00 4.44
1968 6484 8.585018 TCTTATCAGTTGTGATGTTTGACTCTA 58.415 33.333 0.00 0.00 43.66 2.43
1971 6487 6.652481 CCTCTTATCAGTTGTGATGTTTGACT 59.348 38.462 0.00 0.00 43.66 3.41
1972 6488 6.650807 TCCTCTTATCAGTTGTGATGTTTGAC 59.349 38.462 0.00 0.00 43.66 3.18
1973 6489 6.768483 TCCTCTTATCAGTTGTGATGTTTGA 58.232 36.000 0.00 0.00 43.66 2.69
1974 6490 7.439157 TTCCTCTTATCAGTTGTGATGTTTG 57.561 36.000 0.00 0.00 43.66 2.93
1975 6491 7.175641 CCTTTCCTCTTATCAGTTGTGATGTTT 59.824 37.037 0.00 0.00 43.66 2.83
1976 6492 6.656693 CCTTTCCTCTTATCAGTTGTGATGTT 59.343 38.462 0.00 0.00 43.66 2.71
1977 6493 6.013379 TCCTTTCCTCTTATCAGTTGTGATGT 60.013 38.462 0.00 0.00 43.66 3.06
1978 6494 6.409704 TCCTTTCCTCTTATCAGTTGTGATG 58.590 40.000 0.00 0.00 43.66 3.07
1979 6495 6.214412 ACTCCTTTCCTCTTATCAGTTGTGAT 59.786 38.462 0.00 0.00 45.82 3.06
1980 6496 5.544176 ACTCCTTTCCTCTTATCAGTTGTGA 59.456 40.000 0.00 0.00 37.02 3.58
1981 6497 5.799213 ACTCCTTTCCTCTTATCAGTTGTG 58.201 41.667 0.00 0.00 0.00 3.33
1982 6498 6.271159 AGAACTCCTTTCCTCTTATCAGTTGT 59.729 38.462 0.00 0.00 34.32 3.32
1983 6499 6.706295 AGAACTCCTTTCCTCTTATCAGTTG 58.294 40.000 0.00 0.00 34.32 3.16
1984 6500 6.943899 AGAACTCCTTTCCTCTTATCAGTT 57.056 37.500 0.00 0.00 34.32 3.16
1985 6501 6.943899 AAGAACTCCTTTCCTCTTATCAGT 57.056 37.500 0.00 0.00 34.32 3.41
1998 6514 6.008960 AGATGCATCAAAGAAAGAACTCCTT 58.991 36.000 27.81 0.00 36.47 3.36
1999 6515 5.568392 AGATGCATCAAAGAAAGAACTCCT 58.432 37.500 27.81 0.00 0.00 3.69
2000 6516 5.893897 AGATGCATCAAAGAAAGAACTCC 57.106 39.130 27.81 0.00 0.00 3.85
2001 6517 7.548780 AGACTAGATGCATCAAAGAAAGAACTC 59.451 37.037 27.81 14.70 0.00 3.01
2002 6518 7.393216 AGACTAGATGCATCAAAGAAAGAACT 58.607 34.615 27.81 14.53 0.00 3.01
2003 6519 7.201600 GGAGACTAGATGCATCAAAGAAAGAAC 60.202 40.741 27.81 13.66 0.00 3.01
2004 6520 6.820656 GGAGACTAGATGCATCAAAGAAAGAA 59.179 38.462 27.81 1.81 0.00 2.52
2005 6521 6.155910 AGGAGACTAGATGCATCAAAGAAAGA 59.844 38.462 27.81 2.56 40.61 2.52
2006 6522 6.258287 CAGGAGACTAGATGCATCAAAGAAAG 59.742 42.308 27.81 15.88 40.21 2.62
2007 6523 6.111382 CAGGAGACTAGATGCATCAAAGAAA 58.889 40.000 27.81 5.72 40.21 2.52
2008 6524 5.396101 CCAGGAGACTAGATGCATCAAAGAA 60.396 44.000 27.81 7.39 40.21 2.52
2009 6525 4.100653 CCAGGAGACTAGATGCATCAAAGA 59.899 45.833 27.81 9.58 40.21 2.52
2010 6526 4.378774 CCAGGAGACTAGATGCATCAAAG 58.621 47.826 27.81 24.08 40.21 2.77
2011 6527 3.135348 CCCAGGAGACTAGATGCATCAAA 59.865 47.826 27.81 14.61 40.21 2.69
2012 6528 2.702478 CCCAGGAGACTAGATGCATCAA 59.298 50.000 27.81 0.00 40.21 2.57
2013 6529 2.091111 TCCCAGGAGACTAGATGCATCA 60.091 50.000 27.81 13.12 40.21 3.07
2014 6530 2.562298 CTCCCAGGAGACTAGATGCATC 59.438 54.545 19.37 19.37 44.53 3.91
2015 6531 2.178764 TCTCCCAGGAGACTAGATGCAT 59.821 50.000 12.50 0.00 45.26 3.96
2016 6532 1.570979 TCTCCCAGGAGACTAGATGCA 59.429 52.381 12.50 0.00 45.26 3.96
2017 6533 2.373335 TCTCCCAGGAGACTAGATGC 57.627 55.000 12.50 0.00 45.26 3.91
2026 6542 0.319728 CACGCCATATCTCCCAGGAG 59.680 60.000 7.43 7.43 43.21 3.69
2027 6543 0.105709 TCACGCCATATCTCCCAGGA 60.106 55.000 0.00 0.00 0.00 3.86
2028 6544 0.319728 CTCACGCCATATCTCCCAGG 59.680 60.000 0.00 0.00 0.00 4.45
2029 6545 0.320247 GCTCACGCCATATCTCCCAG 60.320 60.000 0.00 0.00 0.00 4.45
2030 6546 1.748403 GCTCACGCCATATCTCCCA 59.252 57.895 0.00 0.00 0.00 4.37
2031 6547 1.373497 CGCTCACGCCATATCTCCC 60.373 63.158 0.00 0.00 0.00 4.30
2032 6548 4.251760 CGCTCACGCCATATCTCC 57.748 61.111 0.00 0.00 0.00 3.71
2042 6558 3.902063 CCGTCGATTGCGCTCACG 61.902 66.667 9.73 11.54 44.07 4.35
2043 6559 1.421410 AATCCGTCGATTGCGCTCAC 61.421 55.000 9.73 0.00 37.33 3.51
2044 6560 0.739462 AAATCCGTCGATTGCGCTCA 60.739 50.000 9.73 0.00 38.75 4.26
2045 6561 0.373716 AAAATCCGTCGATTGCGCTC 59.626 50.000 9.73 0.00 38.75 5.03
2046 6562 0.802494 AAAAATCCGTCGATTGCGCT 59.198 45.000 9.73 0.00 38.75 5.92
2047 6563 1.180166 GAAAAATCCGTCGATTGCGC 58.820 50.000 0.00 0.00 38.75 6.09
2048 6564 2.430956 CTGAAAAATCCGTCGATTGCG 58.569 47.619 0.00 0.00 38.75 4.85
2049 6565 2.418628 TCCTGAAAAATCCGTCGATTGC 59.581 45.455 0.00 0.00 38.75 3.56
2050 6566 3.684788 AGTCCTGAAAAATCCGTCGATTG 59.315 43.478 0.00 0.00 38.75 2.67
2051 6567 3.939066 AGTCCTGAAAAATCCGTCGATT 58.061 40.909 0.00 0.00 40.58 3.34
2052 6568 3.611766 AGTCCTGAAAAATCCGTCGAT 57.388 42.857 0.00 0.00 0.00 3.59
2053 6569 3.396260 AAGTCCTGAAAAATCCGTCGA 57.604 42.857 0.00 0.00 0.00 4.20
2054 6570 3.060363 CGTAAGTCCTGAAAAATCCGTCG 59.940 47.826 0.00 0.00 0.00 5.12
2055 6571 3.370061 CCGTAAGTCCTGAAAAATCCGTC 59.630 47.826 0.00 0.00 0.00 4.79
2056 6572 3.007182 TCCGTAAGTCCTGAAAAATCCGT 59.993 43.478 0.00 0.00 0.00 4.69
2057 6573 3.592059 TCCGTAAGTCCTGAAAAATCCG 58.408 45.455 0.00 0.00 0.00 4.18
2058 6574 4.335594 CCATCCGTAAGTCCTGAAAAATCC 59.664 45.833 0.00 0.00 0.00 3.01
2059 6575 5.064834 GTCCATCCGTAAGTCCTGAAAAATC 59.935 44.000 0.00 0.00 0.00 2.17
2060 6576 4.941873 GTCCATCCGTAAGTCCTGAAAAAT 59.058 41.667 0.00 0.00 0.00 1.82
2061 6577 4.202377 TGTCCATCCGTAAGTCCTGAAAAA 60.202 41.667 0.00 0.00 0.00 1.94
2062 6578 3.325425 TGTCCATCCGTAAGTCCTGAAAA 59.675 43.478 0.00 0.00 0.00 2.29
2063 6579 2.901192 TGTCCATCCGTAAGTCCTGAAA 59.099 45.455 0.00 0.00 0.00 2.69
2064 6580 2.531771 TGTCCATCCGTAAGTCCTGAA 58.468 47.619 0.00 0.00 0.00 3.02
2065 6581 2.225382 TGTCCATCCGTAAGTCCTGA 57.775 50.000 0.00 0.00 0.00 3.86
2066 6582 2.826428 CATGTCCATCCGTAAGTCCTG 58.174 52.381 0.00 0.00 0.00 3.86
2067 6583 1.139058 GCATGTCCATCCGTAAGTCCT 59.861 52.381 0.00 0.00 0.00 3.85
2068 6584 1.134521 TGCATGTCCATCCGTAAGTCC 60.135 52.381 0.00 0.00 0.00 3.85
2069 6585 1.933853 GTGCATGTCCATCCGTAAGTC 59.066 52.381 0.00 0.00 0.00 3.01
2070 6586 1.277842 TGTGCATGTCCATCCGTAAGT 59.722 47.619 0.00 0.00 0.00 2.24
2071 6587 1.665679 GTGTGCATGTCCATCCGTAAG 59.334 52.381 0.00 0.00 0.00 2.34
2072 6588 1.677518 GGTGTGCATGTCCATCCGTAA 60.678 52.381 0.00 0.00 0.00 3.18
2073 6589 0.107897 GGTGTGCATGTCCATCCGTA 60.108 55.000 0.00 0.00 0.00 4.02
2074 6590 1.377202 GGTGTGCATGTCCATCCGT 60.377 57.895 0.00 0.00 0.00 4.69
2075 6591 0.677731 AAGGTGTGCATGTCCATCCG 60.678 55.000 0.00 0.00 0.00 4.18
2076 6592 1.098050 GAAGGTGTGCATGTCCATCC 58.902 55.000 0.00 0.00 0.00 3.51
2077 6593 0.729116 CGAAGGTGTGCATGTCCATC 59.271 55.000 0.00 0.00 0.00 3.51
2078 6594 0.036732 ACGAAGGTGTGCATGTCCAT 59.963 50.000 0.00 0.00 0.00 3.41
2079 6595 0.884259 CACGAAGGTGTGCATGTCCA 60.884 55.000 0.00 0.00 39.38 4.02
2080 6596 1.868997 CACGAAGGTGTGCATGTCC 59.131 57.895 0.00 0.00 39.38 4.02
2095 6611 1.853319 GTCCTTCAGTCGTTGCACG 59.147 57.895 0.00 0.00 44.19 5.34
2096 6612 0.596600 TCGTCCTTCAGTCGTTGCAC 60.597 55.000 0.00 0.00 0.00 4.57
2097 6613 0.103390 TTCGTCCTTCAGTCGTTGCA 59.897 50.000 0.00 0.00 0.00 4.08
2098 6614 1.214367 TTTCGTCCTTCAGTCGTTGC 58.786 50.000 0.00 0.00 0.00 4.17
2099 6615 3.057019 TGATTTCGTCCTTCAGTCGTTG 58.943 45.455 0.00 0.00 0.00 4.10
2100 6616 3.057734 GTGATTTCGTCCTTCAGTCGTT 58.942 45.455 0.00 0.00 0.00 3.85
2101 6617 2.296471 AGTGATTTCGTCCTTCAGTCGT 59.704 45.455 0.00 0.00 0.00 4.34
2102 6618 2.947852 AGTGATTTCGTCCTTCAGTCG 58.052 47.619 0.00 0.00 0.00 4.18
2103 6619 6.642950 CCATATAGTGATTTCGTCCTTCAGTC 59.357 42.308 0.00 0.00 0.00 3.51
2104 6620 6.323996 TCCATATAGTGATTTCGTCCTTCAGT 59.676 38.462 0.00 0.00 0.00 3.41
2105 6621 6.749139 TCCATATAGTGATTTCGTCCTTCAG 58.251 40.000 0.00 0.00 0.00 3.02
2106 6622 6.724893 TCCATATAGTGATTTCGTCCTTCA 57.275 37.500 0.00 0.00 0.00 3.02
2107 6623 6.984474 TGTTCCATATAGTGATTTCGTCCTTC 59.016 38.462 0.00 0.00 0.00 3.46
2108 6624 6.884832 TGTTCCATATAGTGATTTCGTCCTT 58.115 36.000 0.00 0.00 0.00 3.36
2109 6625 6.479972 TGTTCCATATAGTGATTTCGTCCT 57.520 37.500 0.00 0.00 0.00 3.85
2110 6626 6.147821 CCATGTTCCATATAGTGATTTCGTCC 59.852 42.308 0.00 0.00 0.00 4.79
2111 6627 6.347725 GCCATGTTCCATATAGTGATTTCGTC 60.348 42.308 0.00 0.00 0.00 4.20
2112 6628 5.470098 GCCATGTTCCATATAGTGATTTCGT 59.530 40.000 0.00 0.00 0.00 3.85
2113 6629 5.469760 TGCCATGTTCCATATAGTGATTTCG 59.530 40.000 0.00 0.00 0.00 3.46
2114 6630 6.072286 CCTGCCATGTTCCATATAGTGATTTC 60.072 42.308 0.00 0.00 0.00 2.17
2115 6631 5.771666 CCTGCCATGTTCCATATAGTGATTT 59.228 40.000 0.00 0.00 0.00 2.17
2116 6632 5.073554 TCCTGCCATGTTCCATATAGTGATT 59.926 40.000 0.00 0.00 0.00 2.57
2117 6633 4.598807 TCCTGCCATGTTCCATATAGTGAT 59.401 41.667 0.00 0.00 0.00 3.06
2118 6634 3.973305 TCCTGCCATGTTCCATATAGTGA 59.027 43.478 0.00 0.00 0.00 3.41
2119 6635 4.321718 CTCCTGCCATGTTCCATATAGTG 58.678 47.826 0.00 0.00 0.00 2.74
2120 6636 3.244700 GCTCCTGCCATGTTCCATATAGT 60.245 47.826 0.00 0.00 0.00 2.12
2121 6637 3.008813 AGCTCCTGCCATGTTCCATATAG 59.991 47.826 0.00 0.00 40.80 1.31
2122 6638 2.981784 AGCTCCTGCCATGTTCCATATA 59.018 45.455 0.00 0.00 40.80 0.86
2123 6639 1.779092 AGCTCCTGCCATGTTCCATAT 59.221 47.619 0.00 0.00 40.80 1.78
2124 6640 1.134007 CAGCTCCTGCCATGTTCCATA 60.134 52.381 0.00 0.00 40.80 2.74
2125 6641 0.395311 CAGCTCCTGCCATGTTCCAT 60.395 55.000 0.00 0.00 40.80 3.41
2126 6642 1.001764 CAGCTCCTGCCATGTTCCA 60.002 57.895 0.00 0.00 40.80 3.53
2127 6643 1.751927 CCAGCTCCTGCCATGTTCC 60.752 63.158 0.00 0.00 40.80 3.62
2128 6644 0.322816 TTCCAGCTCCTGCCATGTTC 60.323 55.000 0.00 0.00 40.80 3.18
2129 6645 0.333993 ATTCCAGCTCCTGCCATGTT 59.666 50.000 0.00 0.00 40.80 2.71
2130 6646 0.333993 AATTCCAGCTCCTGCCATGT 59.666 50.000 0.00 0.00 40.80 3.21
2131 6647 1.030457 GAATTCCAGCTCCTGCCATG 58.970 55.000 0.00 0.00 40.80 3.66
2132 6648 0.106318 GGAATTCCAGCTCCTGCCAT 60.106 55.000 20.04 0.00 40.80 4.40
2133 6649 1.210204 AGGAATTCCAGCTCCTGCCA 61.210 55.000 26.22 0.00 40.70 4.92
2134 6650 0.033699 AAGGAATTCCAGCTCCTGCC 60.034 55.000 26.22 0.00 41.40 4.85
2135 6651 1.844687 AAAGGAATTCCAGCTCCTGC 58.155 50.000 26.22 0.00 41.40 4.85
2136 6652 3.192212 GTCAAAAGGAATTCCAGCTCCTG 59.808 47.826 26.22 13.41 41.40 3.86
2137 6653 3.425659 GTCAAAAGGAATTCCAGCTCCT 58.574 45.455 26.22 0.82 44.26 3.69
2138 6654 2.493675 GGTCAAAAGGAATTCCAGCTCC 59.506 50.000 26.22 15.37 38.89 4.70
2139 6655 2.493675 GGGTCAAAAGGAATTCCAGCTC 59.506 50.000 26.22 10.74 38.89 4.09
2140 6656 2.529632 GGGTCAAAAGGAATTCCAGCT 58.470 47.619 26.22 7.56 38.89 4.24
2141 6657 1.202348 CGGGTCAAAAGGAATTCCAGC 59.798 52.381 26.22 13.98 38.89 4.85
2142 6658 1.818674 CCGGGTCAAAAGGAATTCCAG 59.181 52.381 26.22 12.69 38.89 3.86
2143 6659 1.549037 CCCGGGTCAAAAGGAATTCCA 60.549 52.381 26.22 1.99 38.89 3.53
2144 6660 1.182667 CCCGGGTCAAAAGGAATTCC 58.817 55.000 17.31 17.31 0.00 3.01
2145 6661 1.919240 ACCCGGGTCAAAAGGAATTC 58.081 50.000 24.16 0.00 0.00 2.17
2146 6662 1.967779 CAACCCGGGTCAAAAGGAATT 59.032 47.619 30.40 3.34 0.00 2.17
2147 6663 1.146152 TCAACCCGGGTCAAAAGGAAT 59.854 47.619 30.40 4.28 0.00 3.01
2148 6664 0.551879 TCAACCCGGGTCAAAAGGAA 59.448 50.000 30.40 3.24 0.00 3.36
2149 6665 0.109723 CTCAACCCGGGTCAAAAGGA 59.890 55.000 30.40 16.11 0.00 3.36
2150 6666 0.893727 CCTCAACCCGGGTCAAAAGG 60.894 60.000 30.40 25.12 0.00 3.11
2151 6667 0.109723 TCCTCAACCCGGGTCAAAAG 59.890 55.000 30.40 20.47 0.00 2.27
2152 6668 0.179012 GTCCTCAACCCGGGTCAAAA 60.179 55.000 30.40 11.83 0.00 2.44
2153 6669 1.452801 GTCCTCAACCCGGGTCAAA 59.547 57.895 30.40 14.60 0.00 2.69
2154 6670 2.522367 GGTCCTCAACCCGGGTCAA 61.522 63.158 30.40 17.41 42.85 3.18
2155 6671 2.926242 GGTCCTCAACCCGGGTCA 60.926 66.667 30.40 16.30 42.85 4.02
2163 6679 1.398692 TGCACAAAAGGGTCCTCAAC 58.601 50.000 0.00 0.00 0.00 3.18
2164 6680 2.158475 AGATGCACAAAAGGGTCCTCAA 60.158 45.455 0.00 0.00 0.00 3.02
2165 6681 1.425066 AGATGCACAAAAGGGTCCTCA 59.575 47.619 0.00 0.00 0.00 3.86
2166 6682 2.206576 AGATGCACAAAAGGGTCCTC 57.793 50.000 0.00 0.00 0.00 3.71
2167 6683 2.683211 AAGATGCACAAAAGGGTCCT 57.317 45.000 0.00 0.00 0.00 3.85
2168 6684 3.751479 AAAAGATGCACAAAAGGGTCC 57.249 42.857 0.00 0.00 0.00 4.46
2188 6704 9.487790 CAAAGAAACTATGCCATTAAAAGGAAA 57.512 29.630 1.73 0.00 0.00 3.13
2189 6705 8.865090 TCAAAGAAACTATGCCATTAAAAGGAA 58.135 29.630 1.73 0.00 0.00 3.36
2190 6706 8.415950 TCAAAGAAACTATGCCATTAAAAGGA 57.584 30.769 1.73 0.00 0.00 3.36
2191 6707 9.090692 CATCAAAGAAACTATGCCATTAAAAGG 57.909 33.333 0.00 0.00 0.00 3.11
2192 6708 9.643693 ACATCAAAGAAACTATGCCATTAAAAG 57.356 29.630 0.00 0.00 0.00 2.27
2193 6709 9.638239 GACATCAAAGAAACTATGCCATTAAAA 57.362 29.630 0.00 0.00 0.00 1.52
2194 6710 9.023962 AGACATCAAAGAAACTATGCCATTAAA 57.976 29.630 0.00 0.00 0.00 1.52
2195 6711 8.579850 AGACATCAAAGAAACTATGCCATTAA 57.420 30.769 0.00 0.00 0.00 1.40
2196 6712 8.579850 AAGACATCAAAGAAACTATGCCATTA 57.420 30.769 0.00 0.00 0.00 1.90
2197 6713 7.472334 AAGACATCAAAGAAACTATGCCATT 57.528 32.000 0.00 0.00 0.00 3.16
2198 6714 7.318141 CAAAGACATCAAAGAAACTATGCCAT 58.682 34.615 0.00 0.00 0.00 4.40
2199 6715 6.680810 CAAAGACATCAAAGAAACTATGCCA 58.319 36.000 0.00 0.00 0.00 4.92
2200 6716 5.574443 GCAAAGACATCAAAGAAACTATGCC 59.426 40.000 0.00 0.00 0.00 4.40
2201 6717 5.574443 GGCAAAGACATCAAAGAAACTATGC 59.426 40.000 0.00 0.00 0.00 3.14
2202 6718 6.917533 AGGCAAAGACATCAAAGAAACTATG 58.082 36.000 0.00 0.00 0.00 2.23
2203 6719 7.530426 AAGGCAAAGACATCAAAGAAACTAT 57.470 32.000 0.00 0.00 0.00 2.12
2204 6720 6.959639 AAGGCAAAGACATCAAAGAAACTA 57.040 33.333 0.00 0.00 0.00 2.24
2205 6721 5.859205 AAGGCAAAGACATCAAAGAAACT 57.141 34.783 0.00 0.00 0.00 2.66
2206 6722 6.908870 AAAAGGCAAAGACATCAAAGAAAC 57.091 33.333 0.00 0.00 0.00 2.78
2207 6723 6.315891 CCAAAAAGGCAAAGACATCAAAGAAA 59.684 34.615 0.00 0.00 0.00 2.52
2208 6724 5.816777 CCAAAAAGGCAAAGACATCAAAGAA 59.183 36.000 0.00 0.00 0.00 2.52
2209 6725 5.358922 CCAAAAAGGCAAAGACATCAAAGA 58.641 37.500 0.00 0.00 0.00 2.52
2210 6726 5.662211 CCAAAAAGGCAAAGACATCAAAG 57.338 39.130 0.00 0.00 0.00 2.77
2224 6740 1.068541 GTAACAGGAGCGCCAAAAAGG 60.069 52.381 9.88 0.00 41.84 3.11
2225 6741 1.880027 AGTAACAGGAGCGCCAAAAAG 59.120 47.619 9.88 0.00 36.29 2.27
2226 6742 1.877443 GAGTAACAGGAGCGCCAAAAA 59.123 47.619 9.88 0.00 36.29 1.94
2227 6743 1.071699 AGAGTAACAGGAGCGCCAAAA 59.928 47.619 9.88 0.00 36.29 2.44
2228 6744 0.685097 AGAGTAACAGGAGCGCCAAA 59.315 50.000 9.88 0.00 36.29 3.28
2229 6745 0.685097 AAGAGTAACAGGAGCGCCAA 59.315 50.000 9.88 0.00 36.29 4.52
2230 6746 0.685097 AAAGAGTAACAGGAGCGCCA 59.315 50.000 9.88 0.00 36.29 5.69
2231 6747 1.066787 AGAAAGAGTAACAGGAGCGCC 60.067 52.381 2.29 0.00 0.00 6.53
2232 6748 2.263945 GAGAAAGAGTAACAGGAGCGC 58.736 52.381 0.00 0.00 0.00 5.92
2233 6749 2.417515 GGGAGAAAGAGTAACAGGAGCG 60.418 54.545 0.00 0.00 0.00 5.03
2234 6750 2.835156 AGGGAGAAAGAGTAACAGGAGC 59.165 50.000 0.00 0.00 0.00 4.70
2235 6751 4.090090 TCAGGGAGAAAGAGTAACAGGAG 58.910 47.826 0.00 0.00 0.00 3.69
2236 6752 4.127918 TCAGGGAGAAAGAGTAACAGGA 57.872 45.455 0.00 0.00 0.00 3.86
2237 6753 4.467795 TGATCAGGGAGAAAGAGTAACAGG 59.532 45.833 0.00 0.00 0.00 4.00
2238 6754 5.667539 TGATCAGGGAGAAAGAGTAACAG 57.332 43.478 0.00 0.00 0.00 3.16
2239 6755 6.213397 TCATTGATCAGGGAGAAAGAGTAACA 59.787 38.462 0.00 0.00 0.00 2.41
2240 6756 6.644347 TCATTGATCAGGGAGAAAGAGTAAC 58.356 40.000 0.00 0.00 0.00 2.50
2241 6757 6.874278 TCATTGATCAGGGAGAAAGAGTAA 57.126 37.500 0.00 0.00 0.00 2.24
2242 6758 6.874278 TTCATTGATCAGGGAGAAAGAGTA 57.126 37.500 0.00 0.00 0.00 2.59
2243 6759 5.768980 TTCATTGATCAGGGAGAAAGAGT 57.231 39.130 0.00 0.00 0.00 3.24
2244 6760 7.416438 CCAAATTCATTGATCAGGGAGAAAGAG 60.416 40.741 0.00 0.00 41.85 2.85
2245 6761 6.379133 CCAAATTCATTGATCAGGGAGAAAGA 59.621 38.462 0.00 0.00 41.85 2.52
2246 6762 6.154021 ACCAAATTCATTGATCAGGGAGAAAG 59.846 38.462 0.00 0.00 41.85 2.62
2247 6763 6.018469 ACCAAATTCATTGATCAGGGAGAAA 58.982 36.000 0.00 0.00 41.85 2.52
2248 6764 5.582953 ACCAAATTCATTGATCAGGGAGAA 58.417 37.500 0.00 0.00 41.85 2.87
2249 6765 5.197224 ACCAAATTCATTGATCAGGGAGA 57.803 39.130 0.00 0.00 41.85 3.71
2250 6766 6.359804 TCTACCAAATTCATTGATCAGGGAG 58.640 40.000 0.00 0.00 41.85 4.30
2251 6767 6.325993 TCTACCAAATTCATTGATCAGGGA 57.674 37.500 0.00 0.00 41.85 4.20
2252 6768 6.774170 TGATCTACCAAATTCATTGATCAGGG 59.226 38.462 0.00 0.00 41.85 4.45
2253 6769 7.812690 TGATCTACCAAATTCATTGATCAGG 57.187 36.000 0.00 0.00 41.85 3.86
2254 6770 8.900781 AGTTGATCTACCAAATTCATTGATCAG 58.099 33.333 3.54 0.00 41.85 2.90
2255 6771 8.812513 AGTTGATCTACCAAATTCATTGATCA 57.187 30.769 3.54 0.00 41.85 2.92
2296 6812 7.724305 ACGTACTATCAGTTGTGATGTTTTT 57.276 32.000 0.00 0.00 43.66 1.94
2297 6813 7.307751 CCAACGTACTATCAGTTGTGATGTTTT 60.308 37.037 8.96 0.00 43.66 2.43
2321 6837 0.615261 TACGTCACTATGTGGGGCCA 60.615 55.000 4.39 0.00 33.87 5.36
2386 6902 7.986889 CCATATTATCACCCAATCATCGTATGA 59.013 37.037 0.99 0.99 44.55 2.15
2388 6904 7.092444 ACCCATATTATCACCCAATCATCGTAT 60.092 37.037 0.00 0.00 0.00 3.06
2389 6905 6.214615 ACCCATATTATCACCCAATCATCGTA 59.785 38.462 0.00 0.00 0.00 3.43
2390 6906 5.014123 ACCCATATTATCACCCAATCATCGT 59.986 40.000 0.00 0.00 0.00 3.73
2391 6907 5.500234 ACCCATATTATCACCCAATCATCG 58.500 41.667 0.00 0.00 0.00 3.84
2392 6908 6.721208 ACAACCCATATTATCACCCAATCATC 59.279 38.462 0.00 0.00 0.00 2.92
2393 6909 6.623329 ACAACCCATATTATCACCCAATCAT 58.377 36.000 0.00 0.00 0.00 2.45
2394 6910 6.024563 ACAACCCATATTATCACCCAATCA 57.975 37.500 0.00 0.00 0.00 2.57
2395 6911 9.920946 ATATACAACCCATATTATCACCCAATC 57.079 33.333 0.00 0.00 0.00 2.67
2398 6914 8.479689 CGTATATACAACCCATATTATCACCCA 58.520 37.037 13.22 0.00 0.00 4.51
2399 6915 7.440255 GCGTATATACAACCCATATTATCACCC 59.560 40.741 13.22 0.00 0.00 4.61
2400 6916 7.168637 CGCGTATATACAACCCATATTATCACC 59.831 40.741 13.22 0.00 0.00 4.02
2401 6917 7.703621 ACGCGTATATACAACCCATATTATCAC 59.296 37.037 11.67 0.00 0.00 3.06
2402 6918 7.774134 ACGCGTATATACAACCCATATTATCA 58.226 34.615 11.67 0.00 0.00 2.15
2403 6919 8.638685 AACGCGTATATACAACCCATATTATC 57.361 34.615 14.46 0.00 0.00 1.75
2404 6920 9.520204 GTAACGCGTATATACAACCCATATTAT 57.480 33.333 14.46 0.00 0.00 1.28
2405 6921 8.739039 AGTAACGCGTATATACAACCCATATTA 58.261 33.333 14.46 0.00 0.00 0.98
2406 6922 7.543172 CAGTAACGCGTATATACAACCCATATT 59.457 37.037 14.46 0.00 0.00 1.28
2407 6923 7.031372 CAGTAACGCGTATATACAACCCATAT 58.969 38.462 14.46 0.00 0.00 1.78
2408 6924 6.016360 ACAGTAACGCGTATATACAACCCATA 60.016 38.462 14.46 0.00 0.00 2.74
2409 6925 5.221303 ACAGTAACGCGTATATACAACCCAT 60.221 40.000 14.46 0.00 0.00 4.00
2410 6926 4.097741 ACAGTAACGCGTATATACAACCCA 59.902 41.667 14.46 0.00 0.00 4.51
2411 6927 4.610945 ACAGTAACGCGTATATACAACCC 58.389 43.478 14.46 0.00 0.00 4.11
2412 6928 7.305993 GGTTTACAGTAACGCGTATATACAACC 60.306 40.741 14.46 16.18 0.00 3.77
2413 6929 7.305993 GGGTTTACAGTAACGCGTATATACAAC 60.306 40.741 14.46 11.37 32.42 3.32
2414 6930 6.695278 GGGTTTACAGTAACGCGTATATACAA 59.305 38.462 14.46 0.03 32.42 2.41
2415 6931 6.205784 GGGTTTACAGTAACGCGTATATACA 58.794 40.000 14.46 0.00 32.42 2.29
2416 6932 6.675515 GGGTTTACAGTAACGCGTATATAC 57.324 41.667 14.46 12.20 32.42 1.47
2424 6940 0.867086 TTGCGGGTTTACAGTAACGC 59.133 50.000 16.14 16.14 46.34 4.84
2425 6941 3.484683 CATTTGCGGGTTTACAGTAACG 58.515 45.455 0.00 0.00 0.00 3.18
2426 6942 3.502979 TCCATTTGCGGGTTTACAGTAAC 59.497 43.478 0.00 0.00 0.00 2.50
2427 6943 3.752665 TCCATTTGCGGGTTTACAGTAA 58.247 40.909 0.00 0.00 0.00 2.24
2428 6944 3.420300 TCCATTTGCGGGTTTACAGTA 57.580 42.857 0.00 0.00 0.00 2.74
2429 6945 2.279935 TCCATTTGCGGGTTTACAGT 57.720 45.000 0.00 0.00 0.00 3.55
2430 6946 3.651803 TTTCCATTTGCGGGTTTACAG 57.348 42.857 0.00 0.00 0.00 2.74
2431 6947 3.574396 TCATTTCCATTTGCGGGTTTACA 59.426 39.130 0.00 0.00 0.00 2.41
2439 6955 3.899734 TGTCTGTTCATTTCCATTTGCG 58.100 40.909 0.00 0.00 0.00 4.85
2458 6974 4.398673 GTCTTACTCGGGTAGAATGTCTGT 59.601 45.833 0.00 0.00 0.00 3.41
2461 6977 3.067883 GGGTCTTACTCGGGTAGAATGTC 59.932 52.174 0.00 0.00 0.00 3.06
2465 6981 2.905415 TGGGTCTTACTCGGGTAGAA 57.095 50.000 0.00 0.00 0.00 2.10
2469 6985 4.226620 ACAATATTTGGGTCTTACTCGGGT 59.773 41.667 0.00 0.00 34.12 5.28
2470 6986 4.777463 ACAATATTTGGGTCTTACTCGGG 58.223 43.478 0.00 0.00 34.12 5.14



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.