Multiple sequence alignment - TraesCS2D01G327000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G327000 chr2D 100.000 5100 0 0 1 5100 420313836 420308737 0.000000e+00 9419.0
1 TraesCS2D01G327000 chr2D 86.275 51 7 0 3972 4022 394119396 394119346 7.130000e-04 56.5
2 TraesCS2D01G327000 chr2B 90.155 2326 125 31 1 2263 492797643 492795359 0.000000e+00 2931.0
3 TraesCS2D01G327000 chr2B 93.873 1469 55 21 2964 4412 492794475 492793022 0.000000e+00 2182.0
4 TraesCS2D01G327000 chr2B 95.856 362 12 2 4393 4751 492793007 492792646 2.650000e-162 582.0
5 TraesCS2D01G327000 chr2A 89.652 2300 147 44 1 2253 569901033 569903288 0.000000e+00 2844.0
6 TraesCS2D01G327000 chr2A 91.576 1840 100 31 2638 4458 569904604 569906407 0.000000e+00 2488.0
7 TraesCS2D01G327000 chr2A 86.275 51 7 0 3972 4022 532086240 532086190 7.130000e-04 56.5
8 TraesCS2D01G327000 chr5D 80.878 706 129 6 3358 4060 480463235 480462533 7.460000e-153 551.0
9 TraesCS2D01G327000 chr5D 81.761 477 82 4 1767 2240 480465276 480464802 1.330000e-105 394.0
10 TraesCS2D01G327000 chr5D 90.909 220 20 0 1343 1562 480465655 480465436 3.860000e-76 296.0
11 TraesCS2D01G327000 chr5A 79.208 707 139 7 3358 4060 599206132 599205430 7.680000e-133 484.0
12 TraesCS2D01G327000 chr5A 81.551 477 83 4 1767 2240 599207818 599207344 6.190000e-104 388.0
13 TraesCS2D01G327000 chr5A 85.763 295 28 7 4751 5043 509741339 509741057 2.980000e-77 300.0
14 TraesCS2D01G327000 chr5A 77.903 267 47 11 1769 2029 693641905 693641645 6.840000e-34 156.0
15 TraesCS2D01G327000 chr5A 94.872 39 2 0 5062 5100 509741058 509741020 1.530000e-05 62.1
16 TraesCS2D01G327000 chr5B 81.799 478 82 4 1767 2241 588648003 588647528 3.700000e-106 396.0
17 TraesCS2D01G327000 chr5B 89.091 220 24 0 1343 1562 588648381 588648162 1.810000e-69 274.0
18 TraesCS2D01G327000 chr1A 79.457 258 47 6 1774 2028 373766810 373767064 1.460000e-40 178.0
19 TraesCS2D01G327000 chr1D 77.860 271 54 6 1774 2041 299584528 299584261 4.090000e-36 163.0
20 TraesCS2D01G327000 chr3B 81.863 204 24 7 3642 3832 824387180 824387383 5.290000e-35 159.0
21 TraesCS2D01G327000 chr1B 77.907 258 51 6 1774 2028 403541785 403542039 6.840000e-34 156.0
22 TraesCS2D01G327000 chr7A 82.209 163 20 5 3642 3795 49367588 49367750 1.150000e-26 132.0
23 TraesCS2D01G327000 chr4D 79.856 139 21 7 1408 1542 63047221 63047086 1.510000e-15 95.3
24 TraesCS2D01G327000 chr4A 79.856 139 21 7 1408 1542 533258470 533258605 1.510000e-15 95.3
25 TraesCS2D01G327000 chr4B 79.137 139 22 7 1408 1542 93412172 93412037 7.030000e-14 89.8
26 TraesCS2D01G327000 chr3A 86.076 79 9 1 3799 3877 691855975 691856051 3.270000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G327000 chr2D 420308737 420313836 5099 True 9419.000000 9419 100.000000 1 5100 1 chr2D.!!$R2 5099
1 TraesCS2D01G327000 chr2B 492792646 492797643 4997 True 1898.333333 2931 93.294667 1 4751 3 chr2B.!!$R1 4750
2 TraesCS2D01G327000 chr2A 569901033 569906407 5374 False 2666.000000 2844 90.614000 1 4458 2 chr2A.!!$F1 4457
3 TraesCS2D01G327000 chr5D 480462533 480465655 3122 True 413.666667 551 84.516000 1343 4060 3 chr5D.!!$R1 2717
4 TraesCS2D01G327000 chr5A 599205430 599207818 2388 True 436.000000 484 80.379500 1767 4060 2 chr5A.!!$R3 2293
5 TraesCS2D01G327000 chr5B 588647528 588648381 853 True 335.000000 396 85.445000 1343 2241 2 chr5B.!!$R1 898

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
566 598 0.536233 CCAACCCGAACATGACCACA 60.536 55.0 0.00 0.00 0.0 4.17 F
1018 1053 0.172578 CATGGTACGGCACTCTCGAA 59.827 55.0 0.00 0.00 0.0 3.71 F
1632 1709 0.038618 TGGCGCGCGTATCTGATATT 60.039 50.0 32.35 0.00 0.0 1.28 F
1634 1711 0.246912 GCGCGCGTATCTGATATTGC 60.247 55.0 32.35 5.38 0.0 3.56 F
2884 4362 0.249657 GTCGGATGAGGGTGATGCTC 60.250 60.0 0.00 0.00 0.0 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1613 1690 0.038618 AATATCAGATACGCGCGCCA 60.039 50.0 32.58 19.39 0.00 5.69 R
2923 4871 0.035152 TGTGGCACATGATCCTGACC 60.035 55.0 17.96 6.46 44.52 4.02 R
3104 5110 0.109153 TCAGTGTCCTGCAACATGCT 59.891 50.0 3.78 0.00 45.31 3.79 R
3112 5118 0.312102 GGCAAGTTTCAGTGTCCTGC 59.688 55.0 0.00 0.00 38.66 4.85 R
4798 7398 0.040692 CCTCGTGTTCGTCGTCTTGA 60.041 55.0 0.00 0.00 38.33 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
77 78 0.687354 AGTGGCGAGGTGAGAACAAT 59.313 50.000 0.00 0.00 0.00 2.71
79 80 0.684535 TGGCGAGGTGAGAACAATGA 59.315 50.000 0.00 0.00 0.00 2.57
90 91 5.512232 GGTGAGAACAATGAAGAGGAAGACT 60.512 44.000 0.00 0.00 0.00 3.24
113 114 3.729356 CTCAGCGAGCATGTACAGT 57.271 52.632 0.33 0.00 0.00 3.55
128 129 3.684305 TGTACAGTGAGAATGCCAATTCG 59.316 43.478 0.00 0.00 45.84 3.34
201 202 7.443844 GAGGGGCCTCGGAAGAAAATATCTT 62.444 48.000 0.84 0.00 41.02 2.40
227 228 0.983378 GGCTGGTCCTAGTCCATGGT 60.983 60.000 12.58 0.00 34.26 3.55
271 272 4.779475 CCACAAGTTGGCGAGAGT 57.221 55.556 7.96 0.00 39.07 3.24
286 287 2.504367 GAGAGTAAAGCACCCAAGCAA 58.496 47.619 0.00 0.00 36.85 3.91
324 325 3.838120 TGTAAGAAGCTCACATGACGAG 58.162 45.455 0.00 6.11 0.00 4.18
337 338 4.797868 CACATGACGAGAAGAAGAGATCAC 59.202 45.833 0.00 0.00 0.00 3.06
345 346 3.829601 AGAAGAAGAGATCACCGAGTTGT 59.170 43.478 0.00 0.00 0.00 3.32
427 449 0.592637 CAACACTGCGGCATCAAAGA 59.407 50.000 1.75 0.00 0.00 2.52
435 457 1.675641 GGCATCAAAGACACCGCCT 60.676 57.895 0.00 0.00 36.58 5.52
456 478 1.812686 CGAACCCCGAGAGAACACCA 61.813 60.000 0.00 0.00 41.76 4.17
457 479 0.613777 GAACCCCGAGAGAACACCAT 59.386 55.000 0.00 0.00 0.00 3.55
462 484 2.076863 CCCGAGAGAACACCATCAAAC 58.923 52.381 0.00 0.00 0.00 2.93
466 492 3.559655 CGAGAGAACACCATCAAACACAA 59.440 43.478 0.00 0.00 0.00 3.33
477 503 5.184864 ACCATCAAACACAAACAGAAAGACA 59.815 36.000 0.00 0.00 0.00 3.41
489 515 4.104086 ACAGAAAGACATGGTAGGGATGA 58.896 43.478 0.00 0.00 0.00 2.92
492 518 4.039730 AGAAAGACATGGTAGGGATGATCG 59.960 45.833 0.00 0.00 0.00 3.69
525 551 2.281970 CAGTGCTTCTGCCAGGCA 60.282 61.111 15.23 15.23 37.36 4.75
539 565 1.031571 CAGGCACAACACACACCACT 61.032 55.000 0.00 0.00 0.00 4.00
555 581 3.307906 CTGTCGACCCCAACCCGA 61.308 66.667 14.12 0.00 0.00 5.14
556 582 2.843411 TGTCGACCCCAACCCGAA 60.843 61.111 14.12 0.00 33.91 4.30
559 591 2.218454 TCGACCCCAACCCGAACAT 61.218 57.895 0.00 0.00 0.00 2.71
566 598 0.536233 CCAACCCGAACATGACCACA 60.536 55.000 0.00 0.00 0.00 4.17
607 639 3.778969 CGTGTAGCAACGGTAGACA 57.221 52.632 2.14 0.00 39.89 3.41
673 707 3.516700 TCATGGACACATCACTGTCATCT 59.483 43.478 0.00 0.00 42.17 2.90
698 732 2.544685 CGATCAGATGTCAAGGACACC 58.455 52.381 0.49 0.00 45.65 4.16
787 822 4.516321 GGAGTAGGATCTTCGAAGGTACTC 59.484 50.000 26.53 27.44 38.49 2.59
851 886 7.784470 AGGAGCTAAAACTAGAAGAAGAAGA 57.216 36.000 0.00 0.00 0.00 2.87
852 887 8.196378 AGGAGCTAAAACTAGAAGAAGAAGAA 57.804 34.615 0.00 0.00 0.00 2.52
853 888 8.311109 AGGAGCTAAAACTAGAAGAAGAAGAAG 58.689 37.037 0.00 0.00 0.00 2.85
981 1016 2.356818 GATTGGCTCCTCGTCCTCGG 62.357 65.000 0.00 0.00 37.69 4.63
1018 1053 0.172578 CATGGTACGGCACTCTCGAA 59.827 55.000 0.00 0.00 0.00 3.71
1140 1175 1.673337 GGTTTCTACCGGCGGCTTT 60.673 57.895 28.71 9.71 34.01 3.51
1248 1283 2.161030 GGCCTCATCCTAGGTACGTAG 58.839 57.143 14.39 14.39 39.02 3.51
1249 1284 2.488710 GGCCTCATCCTAGGTACGTAGT 60.489 54.545 18.62 1.59 40.20 2.73
1250 1285 3.244700 GGCCTCATCCTAGGTACGTAGTA 60.245 52.174 18.62 6.14 37.84 1.82
1316 1390 4.171005 CGATGCAATGTTTTTGCTCATCT 58.829 39.130 11.18 0.00 45.13 2.90
1583 1660 2.040544 GCACACCAACATAGCCGCT 61.041 57.895 0.00 0.00 0.00 5.52
1592 1669 2.370281 ACATAGCCGCTATCATTCCG 57.630 50.000 10.09 1.16 0.00 4.30
1603 1680 4.805719 CGCTATCATTCCGCATGTATGTAT 59.194 41.667 0.00 0.00 34.06 2.29
1629 1706 2.658593 GTGGCGCGCGTATCTGAT 60.659 61.111 32.35 0.00 0.00 2.90
1630 1707 1.371267 GTGGCGCGCGTATCTGATA 60.371 57.895 32.35 6.02 0.00 2.15
1631 1708 0.732880 GTGGCGCGCGTATCTGATAT 60.733 55.000 32.35 0.00 0.00 1.63
1632 1709 0.038618 TGGCGCGCGTATCTGATATT 60.039 50.000 32.35 0.00 0.00 1.28
1633 1710 0.366871 GGCGCGCGTATCTGATATTG 59.633 55.000 32.35 0.00 0.00 1.90
1634 1711 0.246912 GCGCGCGTATCTGATATTGC 60.247 55.000 32.35 5.38 0.00 3.56
1635 1712 1.059942 CGCGCGTATCTGATATTGCA 58.940 50.000 24.19 0.00 0.00 4.08
1636 1713 1.455408 CGCGCGTATCTGATATTGCAA 59.545 47.619 24.19 0.00 0.00 4.08
1637 1714 2.096958 CGCGCGTATCTGATATTGCAAA 60.097 45.455 24.19 0.00 0.00 3.68
1638 1715 3.423515 CGCGCGTATCTGATATTGCAAAT 60.424 43.478 24.19 0.00 0.00 2.32
1639 1716 3.842428 GCGCGTATCTGATATTGCAAATG 59.158 43.478 8.43 8.38 0.00 2.32
1667 1744 0.935898 CACTGCTGCTCCATCGATTC 59.064 55.000 0.00 0.00 0.00 2.52
2242 2319 4.038883 ACATACGGACAGGCTTAGGTATTC 59.961 45.833 0.00 0.00 0.00 1.75
2249 2326 3.712218 ACAGGCTTAGGTATTCCTCCTTC 59.288 47.826 0.00 0.00 43.94 3.46
2256 3381 2.242452 AGGTATTCCTCCTTCTTTGGCC 59.758 50.000 0.00 0.00 40.58 5.36
2260 3385 1.680314 CCTCCTTCTTTGGCCTGGC 60.680 63.158 11.05 11.05 0.00 4.85
2273 3398 1.151450 CCTGGCTGTGTCCCTTTGT 59.849 57.895 0.00 0.00 0.00 2.83
2276 3401 0.751277 TGGCTGTGTCCCTTTGTGTG 60.751 55.000 0.00 0.00 0.00 3.82
2277 3402 1.455383 GGCTGTGTCCCTTTGTGTGG 61.455 60.000 0.00 0.00 0.00 4.17
2279 3404 1.597742 CTGTGTCCCTTTGTGTGGAG 58.402 55.000 0.00 0.00 0.00 3.86
2282 3407 2.708861 TGTGTCCCTTTGTGTGGAGTAT 59.291 45.455 0.00 0.00 0.00 2.12
2283 3408 3.137544 TGTGTCCCTTTGTGTGGAGTATT 59.862 43.478 0.00 0.00 0.00 1.89
2284 3409 4.142038 GTGTCCCTTTGTGTGGAGTATTT 58.858 43.478 0.00 0.00 0.00 1.40
2285 3410 4.023193 GTGTCCCTTTGTGTGGAGTATTTG 60.023 45.833 0.00 0.00 0.00 2.32
2286 3411 3.057526 GTCCCTTTGTGTGGAGTATTTGC 60.058 47.826 0.00 0.00 0.00 3.68
2287 3412 2.095263 CCCTTTGTGTGGAGTATTTGCG 60.095 50.000 0.00 0.00 0.00 4.85
2288 3413 2.584791 CTTTGTGTGGAGTATTTGCGC 58.415 47.619 0.00 0.00 0.00 6.09
2289 3414 1.890876 TTGTGTGGAGTATTTGCGCT 58.109 45.000 9.73 0.00 0.00 5.92
2290 3415 2.753055 TGTGTGGAGTATTTGCGCTA 57.247 45.000 9.73 0.00 0.00 4.26
2291 3416 2.343101 TGTGTGGAGTATTTGCGCTAC 58.657 47.619 9.73 2.58 0.00 3.58
2292 3417 2.028476 TGTGTGGAGTATTTGCGCTACT 60.028 45.455 9.73 8.41 32.17 2.57
2293 3418 3.193903 TGTGTGGAGTATTTGCGCTACTA 59.806 43.478 9.73 0.00 29.67 1.82
2294 3419 4.142026 TGTGTGGAGTATTTGCGCTACTAT 60.142 41.667 9.73 0.00 29.67 2.12
2295 3420 5.068067 TGTGTGGAGTATTTGCGCTACTATA 59.932 40.000 9.73 0.00 29.67 1.31
2296 3421 5.981315 GTGTGGAGTATTTGCGCTACTATAA 59.019 40.000 9.73 0.00 29.67 0.98
2297 3422 5.981315 TGTGGAGTATTTGCGCTACTATAAC 59.019 40.000 9.73 7.99 29.67 1.89
2298 3423 6.183360 TGTGGAGTATTTGCGCTACTATAACT 60.183 38.462 9.73 2.90 29.67 2.24
2299 3424 6.362820 GTGGAGTATTTGCGCTACTATAACTC 59.637 42.308 9.73 11.84 29.67 3.01
2300 3425 6.040054 TGGAGTATTTGCGCTACTATAACTCA 59.960 38.462 9.73 1.93 29.67 3.41
2301 3426 6.583050 GGAGTATTTGCGCTACTATAACTCAG 59.417 42.308 9.73 0.00 29.67 3.35
2302 3427 6.448006 AGTATTTGCGCTACTATAACTCAGG 58.552 40.000 9.73 0.00 0.00 3.86
2303 3428 2.795175 TGCGCTACTATAACTCAGGC 57.205 50.000 9.73 0.00 0.00 4.85
2304 3429 1.001706 TGCGCTACTATAACTCAGGCG 60.002 52.381 9.73 0.00 43.21 5.52
2305 3430 1.001597 GCGCTACTATAACTCAGGCGT 60.002 52.381 0.00 0.00 42.49 5.68
2320 3445 3.004315 TCAGGCGTCATTTGGTTTTCTTC 59.996 43.478 0.00 0.00 0.00 2.87
2326 3451 5.290885 GCGTCATTTGGTTTTCTTCAACTTT 59.709 36.000 0.00 0.00 0.00 2.66
2328 3453 7.623297 GCGTCATTTGGTTTTCTTCAACTTTTT 60.623 33.333 0.00 0.00 0.00 1.94
2353 3478 9.667107 TTTTTGAGAGAGAGTTAGTTTTCTTCA 57.333 29.630 0.00 0.00 0.00 3.02
2354 3479 9.667107 TTTTGAGAGAGAGTTAGTTTTCTTCAA 57.333 29.630 0.00 0.00 0.00 2.69
2355 3480 8.649973 TTGAGAGAGAGTTAGTTTTCTTCAAC 57.350 34.615 0.00 0.00 0.00 3.18
2356 3481 8.012957 TGAGAGAGAGTTAGTTTTCTTCAACT 57.987 34.615 0.00 0.00 40.28 3.16
2357 3482 8.478877 TGAGAGAGAGTTAGTTTTCTTCAACTT 58.521 33.333 0.00 0.00 38.07 2.66
2358 3483 9.968870 GAGAGAGAGTTAGTTTTCTTCAACTTA 57.031 33.333 0.00 0.00 38.07 2.24
2359 3484 9.974980 AGAGAGAGTTAGTTTTCTTCAACTTAG 57.025 33.333 0.00 0.00 38.07 2.18
2360 3485 8.596271 AGAGAGTTAGTTTTCTTCAACTTAGC 57.404 34.615 0.00 0.00 38.07 3.09
2361 3486 8.425703 AGAGAGTTAGTTTTCTTCAACTTAGCT 58.574 33.333 0.00 0.00 38.07 3.32
2362 3487 8.966069 AGAGTTAGTTTTCTTCAACTTAGCTT 57.034 30.769 0.00 0.00 38.07 3.74
2380 3505 9.668497 ACTTAGCTTAAGTATCTTTCGGATTTT 57.332 29.630 4.02 0.00 46.53 1.82
2383 3508 7.762382 AGCTTAAGTATCTTTCGGATTTTTGG 58.238 34.615 4.02 0.00 35.98 3.28
2384 3509 7.610305 AGCTTAAGTATCTTTCGGATTTTTGGA 59.390 33.333 4.02 0.00 35.98 3.53
2385 3510 7.910683 GCTTAAGTATCTTTCGGATTTTTGGAG 59.089 37.037 4.02 0.00 35.98 3.86
2386 3511 8.857694 TTAAGTATCTTTCGGATTTTTGGAGT 57.142 30.769 0.00 0.00 35.98 3.85
2387 3512 9.947433 TTAAGTATCTTTCGGATTTTTGGAGTA 57.053 29.630 0.00 0.00 35.98 2.59
2388 3513 8.494016 AAGTATCTTTCGGATTTTTGGAGTAG 57.506 34.615 0.00 0.00 35.98 2.57
2389 3514 7.621796 AGTATCTTTCGGATTTTTGGAGTAGT 58.378 34.615 0.00 0.00 35.98 2.73
2390 3515 8.755977 AGTATCTTTCGGATTTTTGGAGTAGTA 58.244 33.333 0.00 0.00 35.98 1.82
2391 3516 9.374838 GTATCTTTCGGATTTTTGGAGTAGTAA 57.625 33.333 0.00 0.00 35.98 2.24
2394 3519 9.947433 TCTTTCGGATTTTTGGAGTAGTAATAA 57.053 29.630 0.00 0.00 0.00 1.40
2396 3521 9.729281 TTTCGGATTTTTGGAGTAGTAATAAGT 57.271 29.630 0.00 0.00 0.00 2.24
2397 3522 8.937634 TCGGATTTTTGGAGTAGTAATAAGTC 57.062 34.615 0.00 0.00 0.00 3.01
2398 3523 7.983484 TCGGATTTTTGGAGTAGTAATAAGTCC 59.017 37.037 0.00 0.00 37.04 3.85
2399 3524 7.767198 CGGATTTTTGGAGTAGTAATAAGTCCA 59.233 37.037 0.00 0.00 43.26 4.02
2400 3525 9.628500 GGATTTTTGGAGTAGTAATAAGTCCAT 57.372 33.333 3.96 0.00 44.12 3.41
2409 3534 5.560966 AGTAATAAGTCCATTGGCAAACG 57.439 39.130 3.01 0.00 0.00 3.60
2431 3556 4.449743 CGAGAGTAGTAGGCTAGCTGTTAG 59.550 50.000 15.72 0.00 0.00 2.34
2468 3604 6.174451 TCACATAGTCACGTACTACACTTC 57.826 41.667 6.93 0.00 43.47 3.01
2520 3660 3.947868 ACTGGATGAAATGTGACAGAGG 58.052 45.455 0.00 0.00 0.00 3.69
2521 3661 3.584406 ACTGGATGAAATGTGACAGAGGA 59.416 43.478 0.00 0.00 0.00 3.71
2545 3685 4.058721 TGATGCACGTAGCTATTCATGT 57.941 40.909 0.00 0.00 45.94 3.21
2552 3692 2.408704 CGTAGCTATTCATGTAAGGCGC 59.591 50.000 0.00 0.00 0.00 6.53
2560 3700 5.852282 ATTCATGTAAGGCGCCTAAAAAT 57.148 34.783 33.07 18.87 0.00 1.82
2562 3702 5.744666 TCATGTAAGGCGCCTAAAAATAC 57.255 39.130 33.07 26.78 0.00 1.89
2564 3704 5.295787 TCATGTAAGGCGCCTAAAAATACAG 59.704 40.000 30.92 24.28 0.00 2.74
2565 3705 4.834534 TGTAAGGCGCCTAAAAATACAGA 58.165 39.130 33.07 10.18 0.00 3.41
2566 3706 5.433526 TGTAAGGCGCCTAAAAATACAGAT 58.566 37.500 33.07 12.16 0.00 2.90
2567 3707 5.883673 TGTAAGGCGCCTAAAAATACAGATT 59.116 36.000 33.07 11.93 0.00 2.40
2568 3708 5.500645 AAGGCGCCTAAAAATACAGATTC 57.499 39.130 33.07 0.00 0.00 2.52
2570 3710 3.303791 GGCGCCTAAAAATACAGATTCCG 60.304 47.826 22.15 0.00 0.00 4.30
2574 3714 5.696724 CGCCTAAAAATACAGATTCCGAGAT 59.303 40.000 0.00 0.00 0.00 2.75
2598 3738 0.672711 GGAACGAACACTACCCCTGC 60.673 60.000 0.00 0.00 0.00 4.85
2599 3739 0.672711 GAACGAACACTACCCCTGCC 60.673 60.000 0.00 0.00 0.00 4.85
2602 3742 0.250553 CGAACACTACCCCTGCCAAA 60.251 55.000 0.00 0.00 0.00 3.28
2603 3743 1.816183 CGAACACTACCCCTGCCAAAA 60.816 52.381 0.00 0.00 0.00 2.44
2605 3745 0.536460 ACACTACCCCTGCCAAAACG 60.536 55.000 0.00 0.00 0.00 3.60
2608 3748 1.339727 ACTACCCCTGCCAAAACGATC 60.340 52.381 0.00 0.00 0.00 3.69
2617 3757 1.225745 CAAAACGATCTGCCGACGC 60.226 57.895 0.00 0.00 0.00 5.19
2634 3774 4.465512 CGCCGCCATGTGTCTTGC 62.466 66.667 0.00 0.00 0.00 4.01
2643 3912 4.023792 CGCCATGTGTCTTGCATATACATT 60.024 41.667 8.60 0.00 30.15 2.71
2644 3913 5.217393 GCCATGTGTCTTGCATATACATTG 58.783 41.667 8.60 7.37 30.15 2.82
2648 3917 8.404765 CCATGTGTCTTGCATATACATTGTAAA 58.595 33.333 8.60 0.00 30.15 2.01
2658 3927 6.735694 GCATATACATTGTAAACCTTGGCTGG 60.736 42.308 0.00 0.00 0.00 4.85
2661 3930 4.159557 ACATTGTAAACCTTGGCTGGAAT 58.840 39.130 4.24 0.00 0.00 3.01
2791 4065 2.488545 AGAACTACCTACGTGCAGACAG 59.511 50.000 0.00 0.00 0.00 3.51
2884 4362 0.249657 GTCGGATGAGGGTGATGCTC 60.250 60.000 0.00 0.00 0.00 4.26
2896 4374 0.392706 TGATGCTCCGGCGTGATATT 59.607 50.000 6.01 0.00 42.25 1.28
2908 4386 4.377021 GGCGTGATATTACATCTTGGACA 58.623 43.478 0.00 0.00 0.00 4.02
2939 4890 2.134789 AAAGGTCAGGATCATGTGCC 57.865 50.000 7.33 10.84 0.00 5.01
2981 4961 1.494824 CAGAACTTTTGCTTGCAGCC 58.505 50.000 5.82 0.00 41.51 4.85
3050 5032 4.003788 CCACCTCCACGAACGGCT 62.004 66.667 0.00 0.00 0.00 5.52
3066 5072 2.038557 ACGGCTCCACTAGTGACATTTT 59.961 45.455 24.68 1.44 0.00 1.82
3069 5075 2.749621 GCTCCACTAGTGACATTTTGGG 59.250 50.000 24.68 6.50 0.00 4.12
3077 5083 1.066215 GTGACATTTTGGGGGCCAATC 60.066 52.381 4.39 0.00 43.55 2.67
3099 5105 1.137872 CCGAGGCATTTCTAGAGCACT 59.862 52.381 4.99 0.00 0.00 4.40
3100 5106 2.200067 CGAGGCATTTCTAGAGCACTG 58.800 52.381 4.99 0.00 0.00 3.66
3101 5107 1.939255 GAGGCATTTCTAGAGCACTGC 59.061 52.381 4.99 6.97 0.00 4.40
3102 5108 0.654683 GGCATTTCTAGAGCACTGCG 59.345 55.000 4.99 0.00 0.00 5.18
3103 5109 0.654683 GCATTTCTAGAGCACTGCGG 59.345 55.000 0.00 0.00 0.00 5.69
3104 5110 1.740380 GCATTTCTAGAGCACTGCGGA 60.740 52.381 0.00 0.00 0.00 5.54
3105 5111 2.200067 CATTTCTAGAGCACTGCGGAG 58.800 52.381 0.85 0.85 0.00 4.63
3637 6194 2.681778 CTGACCTCCCTCCAGCGT 60.682 66.667 0.00 0.00 0.00 5.07
3907 6464 0.037447 GGTTCTTCCTGAGCAGCCTT 59.963 55.000 0.00 0.00 0.00 4.35
3918 6475 2.507992 CAGCCTTCTCGTGCTCGG 60.508 66.667 8.49 0.00 35.12 4.63
3997 6554 2.364002 GGACCTCTTCTACTGGATGCTC 59.636 54.545 0.00 0.00 0.00 4.26
4069 6626 0.466543 ACCAGTACAAACGCACCAGA 59.533 50.000 0.00 0.00 0.00 3.86
4122 6680 4.087892 GAGAGGCCAAGCAGCGGA 62.088 66.667 5.01 0.00 0.00 5.54
4197 6755 3.838903 GGGTGGATCGAATAGGTAGGAAT 59.161 47.826 0.00 0.00 0.00 3.01
4534 7132 3.119814 GCGTCAACTCTGTGATACTCAGA 60.120 47.826 0.00 0.00 39.25 3.27
4560 7158 6.226787 ACATCTGCTGGTATGTATTAAGAGC 58.773 40.000 0.00 0.00 34.61 4.09
4632 7230 6.194796 TCAAGTTTCTTTTTGAGTGGAGTG 57.805 37.500 0.00 0.00 0.00 3.51
4753 7353 2.677875 GGGCTTGACTTGGGCCAG 60.678 66.667 6.23 3.69 46.87 4.85
4754 7354 2.677875 GGCTTGACTTGGGCCAGG 60.678 66.667 14.96 14.96 44.69 4.45
4755 7355 2.677875 GCTTGACTTGGGCCAGGG 60.678 66.667 20.71 13.30 0.00 4.45
4756 7356 3.170362 CTTGACTTGGGCCAGGGA 58.830 61.111 20.71 2.89 0.00 4.20
4757 7357 1.001641 CTTGACTTGGGCCAGGGAG 60.002 63.158 20.71 11.43 0.00 4.30
4758 7358 2.490270 CTTGACTTGGGCCAGGGAGG 62.490 65.000 20.71 2.69 41.84 4.30
4782 7382 4.399395 CGGAGGGCAGCAGCAAGA 62.399 66.667 2.65 0.00 44.61 3.02
4783 7383 2.749441 GGAGGGCAGCAGCAAGAC 60.749 66.667 2.65 0.00 44.61 3.01
4784 7384 3.123620 GAGGGCAGCAGCAAGACG 61.124 66.667 2.65 0.00 44.61 4.18
4785 7385 3.890936 GAGGGCAGCAGCAAGACGT 62.891 63.158 2.65 0.00 44.61 4.34
4786 7386 3.730761 GGGCAGCAGCAAGACGTG 61.731 66.667 2.65 0.00 44.61 4.49
4787 7387 3.730761 GGCAGCAGCAAGACGTGG 61.731 66.667 2.65 0.00 44.61 4.94
4788 7388 2.666190 GCAGCAGCAAGACGTGGA 60.666 61.111 0.00 0.00 41.58 4.02
4789 7389 2.675056 GCAGCAGCAAGACGTGGAG 61.675 63.158 0.00 0.00 41.58 3.86
4790 7390 1.005748 CAGCAGCAAGACGTGGAGA 60.006 57.895 0.00 0.00 0.00 3.71
4791 7391 0.390866 CAGCAGCAAGACGTGGAGAT 60.391 55.000 0.00 0.00 0.00 2.75
4792 7392 0.390866 AGCAGCAAGACGTGGAGATG 60.391 55.000 0.00 0.00 0.00 2.90
4793 7393 0.390340 GCAGCAAGACGTGGAGATGA 60.390 55.000 0.00 0.00 0.00 2.92
4794 7394 1.354040 CAGCAAGACGTGGAGATGAC 58.646 55.000 0.00 0.00 0.00 3.06
4795 7395 0.247736 AGCAAGACGTGGAGATGACC 59.752 55.000 0.00 0.00 0.00 4.02
4796 7396 0.247736 GCAAGACGTGGAGATGACCT 59.752 55.000 0.00 0.00 0.00 3.85
4797 7397 2.001812 CAAGACGTGGAGATGACCTG 57.998 55.000 0.00 0.00 0.00 4.00
4798 7398 1.273606 CAAGACGTGGAGATGACCTGT 59.726 52.381 0.00 0.00 0.00 4.00
4799 7399 1.178276 AGACGTGGAGATGACCTGTC 58.822 55.000 0.00 0.00 36.78 3.51
4800 7400 0.888619 GACGTGGAGATGACCTGTCA 59.111 55.000 1.93 1.93 44.59 3.58
4801 7401 1.272490 GACGTGGAGATGACCTGTCAA 59.728 52.381 3.79 0.00 43.58 3.18
4802 7402 1.273606 ACGTGGAGATGACCTGTCAAG 59.726 52.381 3.79 0.00 43.58 3.02
4803 7403 1.546029 CGTGGAGATGACCTGTCAAGA 59.454 52.381 3.79 0.00 43.58 3.02
4804 7404 2.672478 CGTGGAGATGACCTGTCAAGAC 60.672 54.545 3.79 0.00 43.58 3.01
4805 7405 1.546029 TGGAGATGACCTGTCAAGACG 59.454 52.381 3.79 0.00 43.58 4.18
4806 7406 1.819288 GGAGATGACCTGTCAAGACGA 59.181 52.381 3.79 0.00 43.58 4.20
4807 7407 2.416162 GGAGATGACCTGTCAAGACGAC 60.416 54.545 3.79 0.00 43.58 4.34
4815 7415 3.153364 GTCAAGACGACGAACACGA 57.847 52.632 0.00 0.00 34.19 4.35
4816 7416 1.043224 GTCAAGACGACGAACACGAG 58.957 55.000 0.00 0.00 34.19 4.18
4817 7417 0.040692 TCAAGACGACGAACACGAGG 60.041 55.000 0.00 0.00 34.70 4.63
4818 7418 0.040692 CAAGACGACGAACACGAGGA 60.041 55.000 0.00 0.00 34.70 3.71
4819 7419 0.664761 AAGACGACGAACACGAGGAA 59.335 50.000 0.00 0.00 34.70 3.36
4820 7420 0.664761 AGACGACGAACACGAGGAAA 59.335 50.000 0.00 0.00 34.70 3.13
4821 7421 1.050767 GACGACGAACACGAGGAAAG 58.949 55.000 0.00 0.00 34.70 2.62
4822 7422 0.938168 ACGACGAACACGAGGAAAGC 60.938 55.000 0.00 0.00 34.70 3.51
4823 7423 0.937699 CGACGAACACGAGGAAAGCA 60.938 55.000 0.00 0.00 0.00 3.91
4824 7424 1.429463 GACGAACACGAGGAAAGCAT 58.571 50.000 0.00 0.00 0.00 3.79
4825 7425 1.126846 GACGAACACGAGGAAAGCATG 59.873 52.381 0.00 0.00 0.00 4.06
4826 7426 0.179215 CGAACACGAGGAAAGCATGC 60.179 55.000 10.51 10.51 0.00 4.06
4827 7427 0.169009 GAACACGAGGAAAGCATGCC 59.831 55.000 15.66 0.00 0.00 4.40
4828 7428 1.577328 AACACGAGGAAAGCATGCCG 61.577 55.000 15.66 12.20 0.00 5.69
4829 7429 2.436646 ACGAGGAAAGCATGCCGG 60.437 61.111 15.66 0.00 0.00 6.13
4830 7430 2.125147 CGAGGAAAGCATGCCGGA 60.125 61.111 15.66 0.00 0.00 5.14
4831 7431 1.524621 CGAGGAAAGCATGCCGGAT 60.525 57.895 15.66 0.00 0.00 4.18
4832 7432 0.249868 CGAGGAAAGCATGCCGGATA 60.250 55.000 15.66 0.00 0.00 2.59
4833 7433 1.230324 GAGGAAAGCATGCCGGATAC 58.770 55.000 15.66 0.00 0.00 2.24
4834 7434 0.839946 AGGAAAGCATGCCGGATACT 59.160 50.000 15.66 0.90 0.00 2.12
4835 7435 1.212935 AGGAAAGCATGCCGGATACTT 59.787 47.619 15.66 0.00 0.00 2.24
4836 7436 1.604278 GGAAAGCATGCCGGATACTTC 59.396 52.381 15.66 6.05 0.00 3.01
4837 7437 1.604278 GAAAGCATGCCGGATACTTCC 59.396 52.381 15.66 0.00 38.81 3.46
4838 7438 0.546122 AAGCATGCCGGATACTTCCA 59.454 50.000 15.66 0.00 42.74 3.53
4839 7439 0.767375 AGCATGCCGGATACTTCCAT 59.233 50.000 15.66 0.00 42.74 3.41
4840 7440 1.977854 AGCATGCCGGATACTTCCATA 59.022 47.619 15.66 0.00 42.74 2.74
4841 7441 2.027745 AGCATGCCGGATACTTCCATAG 60.028 50.000 15.66 0.00 42.74 2.23
4842 7442 2.028112 GCATGCCGGATACTTCCATAGA 60.028 50.000 5.05 0.00 42.74 1.98
4843 7443 3.369892 GCATGCCGGATACTTCCATAGAT 60.370 47.826 5.05 0.00 42.74 1.98
4844 7444 4.141937 GCATGCCGGATACTTCCATAGATA 60.142 45.833 5.05 0.00 42.74 1.98
4845 7445 5.352284 CATGCCGGATACTTCCATAGATAC 58.648 45.833 5.05 0.00 42.74 2.24
4846 7446 3.767673 TGCCGGATACTTCCATAGATACC 59.232 47.826 5.05 0.00 42.74 2.73
4847 7447 3.181489 GCCGGATACTTCCATAGATACCG 60.181 52.174 5.05 0.00 42.74 4.02
4848 7448 3.181489 CCGGATACTTCCATAGATACCGC 60.181 52.174 0.00 0.00 42.74 5.68
4849 7449 3.487042 CGGATACTTCCATAGATACCGCG 60.487 52.174 0.00 0.00 42.74 6.46
4850 7450 3.693085 GGATACTTCCATAGATACCGCGA 59.307 47.826 8.23 0.00 42.12 5.87
4851 7451 4.438472 GGATACTTCCATAGATACCGCGAC 60.438 50.000 8.23 0.00 42.12 5.19
4852 7452 2.584236 ACTTCCATAGATACCGCGACT 58.416 47.619 8.23 3.89 0.00 4.18
4853 7453 2.957006 ACTTCCATAGATACCGCGACTT 59.043 45.455 8.23 0.00 0.00 3.01
4854 7454 3.243434 ACTTCCATAGATACCGCGACTTG 60.243 47.826 8.23 0.00 0.00 3.16
4855 7455 1.611977 TCCATAGATACCGCGACTTGG 59.388 52.381 8.23 11.23 0.00 3.61
4856 7456 1.336887 CCATAGATACCGCGACTTGGG 60.337 57.143 8.23 3.17 0.00 4.12
4857 7457 1.611977 CATAGATACCGCGACTTGGGA 59.388 52.381 8.23 0.00 0.00 4.37
4858 7458 1.027357 TAGATACCGCGACTTGGGAC 58.973 55.000 8.23 0.00 0.00 4.46
4859 7459 0.968901 AGATACCGCGACTTGGGACA 60.969 55.000 8.23 0.00 0.00 4.02
4860 7460 0.104304 GATACCGCGACTTGGGACAT 59.896 55.000 8.23 0.00 39.30 3.06
4861 7461 0.179084 ATACCGCGACTTGGGACATG 60.179 55.000 8.23 0.00 39.30 3.21
4862 7462 2.845752 TACCGCGACTTGGGACATGC 62.846 60.000 8.23 0.00 39.30 4.06
4863 7463 2.434884 CGCGACTTGGGACATGCT 60.435 61.111 0.00 0.00 39.30 3.79
4864 7464 2.743752 CGCGACTTGGGACATGCTG 61.744 63.158 0.00 0.00 39.30 4.41
4865 7465 2.401766 GCGACTTGGGACATGCTGG 61.402 63.158 0.00 0.00 39.30 4.85
4866 7466 1.746615 CGACTTGGGACATGCTGGG 60.747 63.158 0.00 0.00 39.30 4.45
4867 7467 1.685224 GACTTGGGACATGCTGGGA 59.315 57.895 0.00 0.00 39.30 4.37
4868 7468 0.393537 GACTTGGGACATGCTGGGAG 60.394 60.000 0.00 0.00 39.30 4.30
4869 7469 1.751927 CTTGGGACATGCTGGGAGC 60.752 63.158 0.00 0.00 42.82 4.70
4878 7478 3.081554 GCTGGGAGCAAAGGAGGA 58.918 61.111 0.00 0.00 41.89 3.71
4879 7479 1.611965 GCTGGGAGCAAAGGAGGAT 59.388 57.895 0.00 0.00 41.89 3.24
4880 7480 0.750911 GCTGGGAGCAAAGGAGGATG 60.751 60.000 0.00 0.00 41.89 3.51
4881 7481 0.914644 CTGGGAGCAAAGGAGGATGA 59.085 55.000 0.00 0.00 0.00 2.92
4882 7482 0.914644 TGGGAGCAAAGGAGGATGAG 59.085 55.000 0.00 0.00 0.00 2.90
4883 7483 1.207791 GGGAGCAAAGGAGGATGAGA 58.792 55.000 0.00 0.00 0.00 3.27
4884 7484 1.773653 GGGAGCAAAGGAGGATGAGAT 59.226 52.381 0.00 0.00 0.00 2.75
4885 7485 2.486907 GGGAGCAAAGGAGGATGAGATG 60.487 54.545 0.00 0.00 0.00 2.90
4886 7486 2.220313 GAGCAAAGGAGGATGAGATGC 58.780 52.381 0.00 0.00 0.00 3.91
4887 7487 1.133853 AGCAAAGGAGGATGAGATGCC 60.134 52.381 0.00 0.00 32.95 4.40
4888 7488 1.590932 CAAAGGAGGATGAGATGCCG 58.409 55.000 0.00 0.00 0.00 5.69
4889 7489 0.471617 AAAGGAGGATGAGATGCCGG 59.528 55.000 0.00 0.00 0.00 6.13
4890 7490 0.692419 AAGGAGGATGAGATGCCGGT 60.692 55.000 1.90 0.00 0.00 5.28
4891 7491 1.070445 GGAGGATGAGATGCCGGTG 59.930 63.158 1.90 0.00 0.00 4.94
4892 7492 1.070445 GAGGATGAGATGCCGGTGG 59.930 63.158 1.90 0.00 0.00 4.61
4893 7493 1.383109 AGGATGAGATGCCGGTGGA 60.383 57.895 1.90 0.00 0.00 4.02
4894 7494 1.227674 GGATGAGATGCCGGTGGAC 60.228 63.158 1.90 0.00 0.00 4.02
4895 7495 1.522092 GATGAGATGCCGGTGGACA 59.478 57.895 1.90 0.00 0.00 4.02
4896 7496 0.107456 GATGAGATGCCGGTGGACAT 59.893 55.000 1.90 0.00 0.00 3.06
4897 7497 0.179037 ATGAGATGCCGGTGGACATG 60.179 55.000 1.90 0.00 0.00 3.21
4898 7498 1.524621 GAGATGCCGGTGGACATGG 60.525 63.158 1.90 0.00 0.00 3.66
4902 7502 4.820744 GCCGGTGGACATGGCCAT 62.821 66.667 26.67 14.09 43.06 4.40
4903 7503 2.829914 CCGGTGGACATGGCCATG 60.830 66.667 38.53 38.53 40.68 3.66
4904 7504 3.520862 CGGTGGACATGGCCATGC 61.521 66.667 39.74 31.01 42.39 4.06
4929 7529 4.593864 GGGTCTGATCGCGGCCTC 62.594 72.222 6.13 1.38 0.00 4.70
4930 7530 4.933064 GGTCTGATCGCGGCCTCG 62.933 72.222 9.35 9.35 39.81 4.63
4931 7531 4.933064 GTCTGATCGCGGCCTCGG 62.933 72.222 16.33 3.51 36.79 4.63
4933 7533 4.637489 CTGATCGCGGCCTCGGAG 62.637 72.222 16.33 5.35 36.79 4.63
4947 7547 4.087892 GGAGGCGGCTGCTTCTGA 62.088 66.667 26.64 0.00 45.83 3.27
4948 7548 2.511145 GAGGCGGCTGCTTCTGAG 60.511 66.667 21.57 0.00 43.41 3.35
4961 7561 3.808466 CTTCTGAGCATGTAGGTAGCA 57.192 47.619 0.00 0.00 0.00 3.49
4962 7562 3.452474 CTTCTGAGCATGTAGGTAGCAC 58.548 50.000 0.00 0.00 0.00 4.40
4963 7563 2.739943 TCTGAGCATGTAGGTAGCACT 58.260 47.619 0.00 0.00 0.00 4.40
4964 7564 2.690497 TCTGAGCATGTAGGTAGCACTC 59.310 50.000 0.00 0.00 0.00 3.51
4965 7565 1.757118 TGAGCATGTAGGTAGCACTCC 59.243 52.381 0.00 0.00 0.00 3.85
4966 7566 1.069358 GAGCATGTAGGTAGCACTCCC 59.931 57.143 0.00 0.00 0.00 4.30
4967 7567 0.830648 GCATGTAGGTAGCACTCCCA 59.169 55.000 0.00 0.00 0.00 4.37
4968 7568 1.473434 GCATGTAGGTAGCACTCCCAC 60.473 57.143 0.00 0.00 0.00 4.61
4969 7569 2.111384 CATGTAGGTAGCACTCCCACT 58.889 52.381 0.00 0.00 0.00 4.00
4970 7570 1.557099 TGTAGGTAGCACTCCCACTG 58.443 55.000 0.00 0.00 0.00 3.66
4971 7571 0.175989 GTAGGTAGCACTCCCACTGC 59.824 60.000 0.00 0.00 34.63 4.40
4972 7572 0.041238 TAGGTAGCACTCCCACTGCT 59.959 55.000 0.00 0.00 46.82 4.24
4973 7573 1.219393 GGTAGCACTCCCACTGCTC 59.781 63.158 0.00 0.00 44.07 4.26
4974 7574 1.153745 GTAGCACTCCCACTGCTCG 60.154 63.158 0.00 0.00 44.07 5.03
4975 7575 1.606601 TAGCACTCCCACTGCTCGT 60.607 57.895 0.00 0.00 44.07 4.18
4976 7576 1.185618 TAGCACTCCCACTGCTCGTT 61.186 55.000 0.00 0.00 44.07 3.85
4977 7577 2.029844 GCACTCCCACTGCTCGTTC 61.030 63.158 0.00 0.00 0.00 3.95
4978 7578 1.374758 CACTCCCACTGCTCGTTCC 60.375 63.158 0.00 0.00 0.00 3.62
4979 7579 1.534235 ACTCCCACTGCTCGTTCCT 60.534 57.895 0.00 0.00 0.00 3.36
4980 7580 1.122019 ACTCCCACTGCTCGTTCCTT 61.122 55.000 0.00 0.00 0.00 3.36
4981 7581 0.671781 CTCCCACTGCTCGTTCCTTG 60.672 60.000 0.00 0.00 0.00 3.61
4982 7582 1.672356 CCCACTGCTCGTTCCTTGG 60.672 63.158 0.00 0.00 0.00 3.61
4983 7583 1.371183 CCACTGCTCGTTCCTTGGA 59.629 57.895 0.00 0.00 0.00 3.53
4984 7584 0.671781 CCACTGCTCGTTCCTTGGAG 60.672 60.000 0.00 0.00 0.00 3.86
4985 7585 0.318441 CACTGCTCGTTCCTTGGAGA 59.682 55.000 0.00 0.00 31.90 3.71
4986 7586 1.048601 ACTGCTCGTTCCTTGGAGAA 58.951 50.000 0.00 0.00 31.90 2.87
4987 7587 1.416401 ACTGCTCGTTCCTTGGAGAAA 59.584 47.619 0.00 0.00 31.90 2.52
4988 7588 2.039084 ACTGCTCGTTCCTTGGAGAAAT 59.961 45.455 0.00 0.00 31.90 2.17
4989 7589 2.675348 CTGCTCGTTCCTTGGAGAAATC 59.325 50.000 0.00 0.00 31.90 2.17
4990 7590 2.303022 TGCTCGTTCCTTGGAGAAATCT 59.697 45.455 0.00 0.00 31.90 2.40
4991 7591 3.244561 TGCTCGTTCCTTGGAGAAATCTT 60.245 43.478 0.00 0.00 31.90 2.40
4992 7592 3.753797 GCTCGTTCCTTGGAGAAATCTTT 59.246 43.478 0.00 0.00 31.90 2.52
4993 7593 4.216472 GCTCGTTCCTTGGAGAAATCTTTT 59.784 41.667 0.00 0.00 31.90 2.27
4994 7594 5.689383 TCGTTCCTTGGAGAAATCTTTTG 57.311 39.130 0.00 0.00 0.00 2.44
4995 7595 5.373222 TCGTTCCTTGGAGAAATCTTTTGA 58.627 37.500 0.00 0.00 0.00 2.69
4996 7596 6.003950 TCGTTCCTTGGAGAAATCTTTTGAT 58.996 36.000 0.00 0.00 41.73 2.57
4997 7597 6.149474 TCGTTCCTTGGAGAAATCTTTTGATC 59.851 38.462 0.00 0.00 38.40 2.92
4998 7598 6.072508 CGTTCCTTGGAGAAATCTTTTGATCA 60.073 38.462 0.00 0.00 38.40 2.92
4999 7599 7.522073 CGTTCCTTGGAGAAATCTTTTGATCAA 60.522 37.037 3.38 3.38 38.40 2.57
5000 7600 8.309656 GTTCCTTGGAGAAATCTTTTGATCAAT 58.690 33.333 9.40 0.00 38.40 2.57
5001 7601 9.532494 TTCCTTGGAGAAATCTTTTGATCAATA 57.468 29.630 9.40 3.48 38.40 1.90
5002 7602 9.705103 TCCTTGGAGAAATCTTTTGATCAATAT 57.295 29.630 9.40 0.94 38.40 1.28
5003 7603 9.745880 CCTTGGAGAAATCTTTTGATCAATATG 57.254 33.333 9.40 2.95 38.40 1.78
5004 7604 9.745880 CTTGGAGAAATCTTTTGATCAATATGG 57.254 33.333 9.40 0.51 38.40 2.74
5005 7605 7.719483 TGGAGAAATCTTTTGATCAATATGGC 58.281 34.615 9.40 0.85 38.40 4.40
5006 7606 7.562454 TGGAGAAATCTTTTGATCAATATGGCT 59.438 33.333 9.40 5.12 38.40 4.75
5007 7607 8.081025 GGAGAAATCTTTTGATCAATATGGCTC 58.919 37.037 9.40 12.11 38.40 4.70
5008 7608 7.949434 AGAAATCTTTTGATCAATATGGCTCC 58.051 34.615 9.40 0.00 38.40 4.70
5009 7609 7.562454 AGAAATCTTTTGATCAATATGGCTCCA 59.438 33.333 9.40 0.00 38.40 3.86
5010 7610 7.664552 AATCTTTTGATCAATATGGCTCCAA 57.335 32.000 9.40 0.00 38.40 3.53
5011 7611 6.455360 TCTTTTGATCAATATGGCTCCAAC 57.545 37.500 9.40 0.00 0.00 3.77
5012 7612 5.360714 TCTTTTGATCAATATGGCTCCAACC 59.639 40.000 9.40 0.00 0.00 3.77
5013 7613 4.524802 TTGATCAATATGGCTCCAACCT 57.475 40.909 3.38 0.00 0.00 3.50
5014 7614 4.090761 TGATCAATATGGCTCCAACCTC 57.909 45.455 0.00 0.00 0.00 3.85
5015 7615 3.459227 TGATCAATATGGCTCCAACCTCA 59.541 43.478 0.00 0.00 0.00 3.86
5016 7616 4.079844 TGATCAATATGGCTCCAACCTCAA 60.080 41.667 0.00 0.00 0.00 3.02
5017 7617 3.889815 TCAATATGGCTCCAACCTCAAG 58.110 45.455 0.00 0.00 0.00 3.02
5018 7618 2.954318 CAATATGGCTCCAACCTCAAGG 59.046 50.000 0.00 0.00 42.17 3.61
5019 7619 0.255890 TATGGCTCCAACCTCAAGGC 59.744 55.000 0.00 0.00 39.32 4.35
5020 7620 2.361737 GGCTCCAACCTCAAGGCC 60.362 66.667 0.00 0.00 39.32 5.19
5021 7621 2.361737 GCTCCAACCTCAAGGCCC 60.362 66.667 0.00 0.00 39.32 5.80
5022 7622 2.911926 GCTCCAACCTCAAGGCCCT 61.912 63.158 0.00 0.00 39.32 5.19
5023 7623 1.301293 CTCCAACCTCAAGGCCCTC 59.699 63.158 0.00 0.00 39.32 4.30
5024 7624 2.203549 CTCCAACCTCAAGGCCCTCC 62.204 65.000 0.00 0.00 39.32 4.30
5025 7625 2.356667 CAACCTCAAGGCCCTCCC 59.643 66.667 0.00 0.00 39.32 4.30
5027 7627 2.234296 AACCTCAAGGCCCTCCCTG 61.234 63.158 0.00 0.00 45.62 4.45
5028 7628 2.612115 CCTCAAGGCCCTCCCTGT 60.612 66.667 0.00 0.00 45.62 4.00
5029 7629 2.234296 CCTCAAGGCCCTCCCTGTT 61.234 63.158 0.00 0.00 45.62 3.16
5030 7630 1.301293 CTCAAGGCCCTCCCTGTTC 59.699 63.158 0.00 0.00 45.62 3.18
5031 7631 2.203549 CTCAAGGCCCTCCCTGTTCC 62.204 65.000 0.00 0.00 45.62 3.62
5032 7632 2.211279 AAGGCCCTCCCTGTTCCT 59.789 61.111 0.00 0.00 45.62 3.36
5033 7633 1.925972 AAGGCCCTCCCTGTTCCTC 60.926 63.158 0.00 0.00 45.62 3.71
5034 7634 3.412408 GGCCCTCCCTGTTCCTCC 61.412 72.222 0.00 0.00 0.00 4.30
5035 7635 2.285743 GCCCTCCCTGTTCCTCCT 60.286 66.667 0.00 0.00 0.00 3.69
5036 7636 2.674220 GCCCTCCCTGTTCCTCCTG 61.674 68.421 0.00 0.00 0.00 3.86
5037 7637 2.674220 CCCTCCCTGTTCCTCCTGC 61.674 68.421 0.00 0.00 0.00 4.85
5038 7638 2.674220 CCTCCCTGTTCCTCCTGCC 61.674 68.421 0.00 0.00 0.00 4.85
5039 7639 1.614824 CTCCCTGTTCCTCCTGCCT 60.615 63.158 0.00 0.00 0.00 4.75
5040 7640 1.613630 TCCCTGTTCCTCCTGCCTC 60.614 63.158 0.00 0.00 0.00 4.70
5041 7641 1.614824 CCCTGTTCCTCCTGCCTCT 60.615 63.158 0.00 0.00 0.00 3.69
5042 7642 1.601171 CCTGTTCCTCCTGCCTCTG 59.399 63.158 0.00 0.00 0.00 3.35
5043 7643 1.078567 CTGTTCCTCCTGCCTCTGC 60.079 63.158 0.00 0.00 38.26 4.26
5044 7644 1.537397 TGTTCCTCCTGCCTCTGCT 60.537 57.895 0.00 0.00 38.71 4.24
5045 7645 1.078567 GTTCCTCCTGCCTCTGCTG 60.079 63.158 0.00 0.00 38.71 4.41
5051 7651 2.960170 CTGCCTCTGCTGGTTTGC 59.040 61.111 0.00 0.00 38.71 3.68
5052 7652 2.598394 TGCCTCTGCTGGTTTGCC 60.598 61.111 0.00 0.00 38.71 4.52
5053 7653 2.282745 GCCTCTGCTGGTTTGCCT 60.283 61.111 0.00 0.00 35.27 4.75
5054 7654 2.338785 GCCTCTGCTGGTTTGCCTC 61.339 63.158 0.00 0.00 35.27 4.70
5055 7655 1.377994 CCTCTGCTGGTTTGCCTCT 59.622 57.895 0.00 0.00 35.27 3.69
5056 7656 0.959372 CCTCTGCTGGTTTGCCTCTG 60.959 60.000 0.00 0.00 35.27 3.35
5057 7657 0.250640 CTCTGCTGGTTTGCCTCTGT 60.251 55.000 0.00 0.00 35.27 3.41
5058 7658 0.183492 TCTGCTGGTTTGCCTCTGTT 59.817 50.000 0.00 0.00 35.27 3.16
5059 7659 1.035139 CTGCTGGTTTGCCTCTGTTT 58.965 50.000 0.00 0.00 35.27 2.83
5060 7660 0.746063 TGCTGGTTTGCCTCTGTTTG 59.254 50.000 0.00 0.00 35.27 2.93
5061 7661 0.746659 GCTGGTTTGCCTCTGTTTGT 59.253 50.000 0.00 0.00 35.27 2.83
5062 7662 1.536709 GCTGGTTTGCCTCTGTTTGTG 60.537 52.381 0.00 0.00 35.27 3.33
5063 7663 1.067516 CTGGTTTGCCTCTGTTTGTGG 59.932 52.381 0.00 0.00 35.27 4.17
5068 7668 4.404691 CCTCTGTTTGTGGCTCCC 57.595 61.111 0.00 0.00 0.00 4.30
5069 7669 1.763770 CCTCTGTTTGTGGCTCCCT 59.236 57.895 0.00 0.00 0.00 4.20
5070 7670 0.322008 CCTCTGTTTGTGGCTCCCTC 60.322 60.000 0.00 0.00 0.00 4.30
5071 7671 0.671781 CTCTGTTTGTGGCTCCCTCG 60.672 60.000 0.00 0.00 0.00 4.63
5072 7672 1.672356 CTGTTTGTGGCTCCCTCGG 60.672 63.158 0.00 0.00 0.00 4.63
5073 7673 3.056328 GTTTGTGGCTCCCTCGGC 61.056 66.667 0.00 0.00 0.00 5.54
5074 7674 3.249189 TTTGTGGCTCCCTCGGCT 61.249 61.111 0.00 0.00 0.00 5.52
5075 7675 2.829384 TTTGTGGCTCCCTCGGCTT 61.829 57.895 0.00 0.00 0.00 4.35
5076 7676 2.748058 TTTGTGGCTCCCTCGGCTTC 62.748 60.000 0.00 0.00 0.00 3.86
5077 7677 4.821589 GTGGCTCCCTCGGCTTCG 62.822 72.222 0.00 0.00 0.00 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 3.057969 TGGATGGTTCACAACTAGCAG 57.942 47.619 0.00 0.00 29.08 4.24
18 19 3.816398 TGGGTATTGGATGGTTCACAA 57.184 42.857 0.00 0.00 0.00 3.33
128 129 2.283173 CCAACCCCTTGAGGTGGC 60.283 66.667 0.00 0.00 40.05 5.01
201 202 0.333993 ACTAGGACCAGCCCTCGTAA 59.666 55.000 0.00 0.00 37.74 3.18
205 206 0.399233 ATGGACTAGGACCAGCCCTC 60.399 60.000 14.47 0.00 40.89 4.30
206 207 0.692419 CATGGACTAGGACCAGCCCT 60.692 60.000 14.47 0.00 40.89 5.19
209 210 0.179000 CACCATGGACTAGGACCAGC 59.821 60.000 21.47 0.00 40.89 4.85
227 228 4.891168 TGTATGTCCTCTATTTACGCTCCA 59.109 41.667 0.00 0.00 0.00 3.86
271 272 1.337118 CCCTTTGCTTGGGTGCTTTA 58.663 50.000 0.00 0.00 39.82 1.85
286 287 4.222145 TCTTACAACACTCTATTCGCCCTT 59.778 41.667 0.00 0.00 0.00 3.95
324 325 4.181309 ACAACTCGGTGATCTCTTCTTC 57.819 45.455 0.00 0.00 0.00 2.87
337 338 4.119862 CTCTCTCTCTCTCTACAACTCGG 58.880 52.174 0.00 0.00 0.00 4.63
345 346 6.101881 TCTCTCTCTCTCTCTCTCTCTCTCTA 59.898 46.154 0.00 0.00 0.00 2.43
427 449 4.324991 GGGGTTCGAAGGCGGTGT 62.325 66.667 0.00 0.00 38.28 4.16
456 478 6.127366 ACCATGTCTTTCTGTTTGTGTTTGAT 60.127 34.615 0.00 0.00 0.00 2.57
457 479 5.184864 ACCATGTCTTTCTGTTTGTGTTTGA 59.815 36.000 0.00 0.00 0.00 2.69
462 484 4.216257 CCCTACCATGTCTTTCTGTTTGTG 59.784 45.833 0.00 0.00 0.00 3.33
466 492 4.536090 TCATCCCTACCATGTCTTTCTGTT 59.464 41.667 0.00 0.00 0.00 3.16
477 503 2.317371 AGAGCGATCATCCCTACCAT 57.683 50.000 2.38 0.00 0.00 3.55
489 515 1.067846 TGCTTCGTGTTGTAGAGCGAT 60.068 47.619 0.00 0.00 33.27 4.58
492 518 1.457303 CACTGCTTCGTGTTGTAGAGC 59.543 52.381 0.00 0.00 0.00 4.09
516 542 2.120282 TGTGTGTTGTGCCTGGCAG 61.120 57.895 24.10 7.75 40.08 4.85
525 551 0.248012 TCGACAGTGGTGTGTGTTGT 59.752 50.000 0.00 0.00 36.88 3.32
539 565 2.843411 TTCGGGTTGGGGTCGACA 60.843 61.111 18.91 0.00 32.39 4.35
555 581 2.092429 AGGTGTGTTCTGTGGTCATGTT 60.092 45.455 0.00 0.00 0.00 2.71
556 582 1.490490 AGGTGTGTTCTGTGGTCATGT 59.510 47.619 0.00 0.00 0.00 3.21
559 591 0.468226 GGAGGTGTGTTCTGTGGTCA 59.532 55.000 0.00 0.00 0.00 4.02
566 598 0.765510 GGTTGGAGGAGGTGTGTTCT 59.234 55.000 0.00 0.00 0.00 3.01
606 638 5.910166 CGTCATCTTAGAGACCTAAACGATG 59.090 44.000 0.00 0.00 37.47 3.84
607 639 5.505985 GCGTCATCTTAGAGACCTAAACGAT 60.506 44.000 9.79 0.00 37.47 3.73
653 687 3.516700 TCAGATGACAGTGATGTGTCCAT 59.483 43.478 0.00 0.00 45.42 3.41
673 707 3.068732 GTCCTTGACATCTGATCGGATCA 59.931 47.826 18.96 18.96 33.61 2.92
698 732 3.055385 TGTTTAATCACTTCCTCGGAGGG 60.055 47.826 23.39 11.16 35.59 4.30
787 822 1.250154 TTTTCCGATGGGCAAGCCAG 61.250 55.000 13.87 1.06 37.98 4.85
851 886 8.373220 AGATTTCCATGCATTTCTCTTTTTCTT 58.627 29.630 0.00 0.00 0.00 2.52
852 887 7.904205 AGATTTCCATGCATTTCTCTTTTTCT 58.096 30.769 0.00 0.00 0.00 2.52
853 888 7.277319 GGAGATTTCCATGCATTTCTCTTTTTC 59.723 37.037 0.00 0.00 43.45 2.29
944 979 0.522180 TCGAACAGAGAACGGAGAGC 59.478 55.000 0.00 0.00 0.00 4.09
981 1016 1.226128 GTTGCTTCTTGCGATCGGC 60.226 57.895 18.30 10.96 46.63 5.54
1018 1053 7.886338 TCGTCATATAGCAGTGTTATTCTGAT 58.114 34.615 4.71 0.00 35.20 2.90
1140 1175 2.741985 CAGCCGCCATTGTCGTCA 60.742 61.111 0.00 0.00 0.00 4.35
1248 1283 6.096036 TGCTCTCCGACTAGTATATACGTAC 58.904 44.000 7.23 0.00 0.00 3.67
1249 1284 6.071672 ACTGCTCTCCGACTAGTATATACGTA 60.072 42.308 7.23 0.00 0.00 3.57
1250 1285 5.144692 TGCTCTCCGACTAGTATATACGT 57.855 43.478 7.23 0.00 0.00 3.57
1251 1286 5.062433 CACTGCTCTCCGACTAGTATATACG 59.938 48.000 7.23 0.00 0.00 3.06
1252 1287 6.164876 TCACTGCTCTCCGACTAGTATATAC 58.835 44.000 4.60 4.60 0.00 1.47
1266 1301 0.532573 TCAACGGGATCACTGCTCTC 59.467 55.000 0.00 0.00 0.00 3.20
1267 1302 0.976641 TTCAACGGGATCACTGCTCT 59.023 50.000 0.00 0.00 0.00 4.09
1316 1390 3.632604 TGAGACGGCAAAAACCACATAAA 59.367 39.130 0.00 0.00 0.00 1.40
1612 1689 0.732880 ATATCAGATACGCGCGCCAC 60.733 55.000 32.58 20.50 0.00 5.01
1613 1690 0.038618 AATATCAGATACGCGCGCCA 60.039 50.000 32.58 19.39 0.00 5.69
2242 2319 1.680314 GCCAGGCCAAAGAAGGAGG 60.680 63.158 5.01 0.00 0.00 4.30
2249 2326 2.270986 GGACACAGCCAGGCCAAAG 61.271 63.158 8.22 0.00 0.00 2.77
2256 3381 0.466189 ACACAAAGGGACACAGCCAG 60.466 55.000 0.00 0.00 0.00 4.85
2260 3385 1.134098 ACTCCACACAAAGGGACACAG 60.134 52.381 0.00 0.00 0.00 3.66
2273 3398 4.665833 ATAGTAGCGCAAATACTCCACA 57.334 40.909 11.47 0.00 35.20 4.17
2276 3401 6.444633 TGAGTTATAGTAGCGCAAATACTCC 58.555 40.000 11.47 0.00 35.20 3.85
2277 3402 6.583050 CCTGAGTTATAGTAGCGCAAATACTC 59.417 42.308 11.47 12.80 35.20 2.59
2279 3404 5.118817 GCCTGAGTTATAGTAGCGCAAATAC 59.881 44.000 11.47 3.24 0.00 1.89
2282 3407 3.454375 GCCTGAGTTATAGTAGCGCAAA 58.546 45.455 11.47 0.00 0.00 3.68
2283 3408 2.543031 CGCCTGAGTTATAGTAGCGCAA 60.543 50.000 11.47 0.00 35.33 4.85
2284 3409 1.001706 CGCCTGAGTTATAGTAGCGCA 60.002 52.381 11.47 0.00 35.33 6.09
2285 3410 1.001597 ACGCCTGAGTTATAGTAGCGC 60.002 52.381 0.00 0.00 45.52 5.92
2286 3411 2.289820 TGACGCCTGAGTTATAGTAGCG 59.710 50.000 0.00 0.00 46.88 4.26
2287 3412 3.984508 TGACGCCTGAGTTATAGTAGC 57.015 47.619 0.00 0.00 0.00 3.58
2288 3413 5.692204 CCAAATGACGCCTGAGTTATAGTAG 59.308 44.000 0.00 0.00 0.00 2.57
2289 3414 5.128171 ACCAAATGACGCCTGAGTTATAGTA 59.872 40.000 0.00 0.00 0.00 1.82
2290 3415 4.081087 ACCAAATGACGCCTGAGTTATAGT 60.081 41.667 0.00 0.00 0.00 2.12
2291 3416 4.442706 ACCAAATGACGCCTGAGTTATAG 58.557 43.478 0.00 0.00 0.00 1.31
2292 3417 4.481368 ACCAAATGACGCCTGAGTTATA 57.519 40.909 0.00 0.00 0.00 0.98
2293 3418 3.350219 ACCAAATGACGCCTGAGTTAT 57.650 42.857 0.00 0.00 0.00 1.89
2294 3419 2.851263 ACCAAATGACGCCTGAGTTA 57.149 45.000 0.00 0.00 0.00 2.24
2295 3420 1.981256 AACCAAATGACGCCTGAGTT 58.019 45.000 0.00 0.00 0.00 3.01
2296 3421 1.981256 AAACCAAATGACGCCTGAGT 58.019 45.000 0.00 0.00 0.00 3.41
2297 3422 2.554032 AGAAAACCAAATGACGCCTGAG 59.446 45.455 0.00 0.00 0.00 3.35
2298 3423 2.582052 AGAAAACCAAATGACGCCTGA 58.418 42.857 0.00 0.00 0.00 3.86
2299 3424 3.243367 TGAAGAAAACCAAATGACGCCTG 60.243 43.478 0.00 0.00 0.00 4.85
2300 3425 2.955660 TGAAGAAAACCAAATGACGCCT 59.044 40.909 0.00 0.00 0.00 5.52
2301 3426 3.363341 TGAAGAAAACCAAATGACGCC 57.637 42.857 0.00 0.00 0.00 5.68
2302 3427 4.359706 AGTTGAAGAAAACCAAATGACGC 58.640 39.130 0.00 0.00 0.00 5.19
2303 3428 6.885735 AAAGTTGAAGAAAACCAAATGACG 57.114 33.333 0.00 0.00 0.00 4.35
2328 3453 9.667107 TTGAAGAAAACTAACTCTCTCTCAAAA 57.333 29.630 0.00 0.00 0.00 2.44
2329 3454 9.099454 GTTGAAGAAAACTAACTCTCTCTCAAA 57.901 33.333 0.00 0.00 0.00 2.69
2330 3455 8.478877 AGTTGAAGAAAACTAACTCTCTCTCAA 58.521 33.333 0.00 0.00 38.62 3.02
2331 3456 8.012957 AGTTGAAGAAAACTAACTCTCTCTCA 57.987 34.615 0.00 0.00 38.62 3.27
2332 3457 8.880878 AAGTTGAAGAAAACTAACTCTCTCTC 57.119 34.615 0.00 0.00 39.48 3.20
2333 3458 9.974980 CTAAGTTGAAGAAAACTAACTCTCTCT 57.025 33.333 0.00 0.00 39.48 3.10
2334 3459 8.705134 GCTAAGTTGAAGAAAACTAACTCTCTC 58.295 37.037 0.00 0.00 39.48 3.20
2335 3460 8.425703 AGCTAAGTTGAAGAAAACTAACTCTCT 58.574 33.333 0.00 0.00 39.48 3.10
2336 3461 8.596271 AGCTAAGTTGAAGAAAACTAACTCTC 57.404 34.615 0.00 0.00 39.48 3.20
2337 3462 8.966069 AAGCTAAGTTGAAGAAAACTAACTCT 57.034 30.769 0.00 0.00 39.48 3.24
2348 3473 9.355215 CGAAAGATACTTAAGCTAAGTTGAAGA 57.645 33.333 1.29 0.00 46.27 2.87
2349 3474 8.596380 CCGAAAGATACTTAAGCTAAGTTGAAG 58.404 37.037 1.29 1.84 46.27 3.02
2350 3475 8.308931 TCCGAAAGATACTTAAGCTAAGTTGAA 58.691 33.333 1.29 0.00 46.27 2.69
2351 3476 7.833786 TCCGAAAGATACTTAAGCTAAGTTGA 58.166 34.615 1.29 0.00 46.27 3.18
2352 3477 8.649973 ATCCGAAAGATACTTAAGCTAAGTTG 57.350 34.615 1.29 0.00 46.27 3.16
2357 3482 8.889717 CCAAAAATCCGAAAGATACTTAAGCTA 58.110 33.333 1.29 0.00 33.66 3.32
2358 3483 7.610305 TCCAAAAATCCGAAAGATACTTAAGCT 59.390 33.333 1.29 0.00 33.66 3.74
2359 3484 7.758495 TCCAAAAATCCGAAAGATACTTAAGC 58.242 34.615 1.29 0.00 33.66 3.09
2360 3485 8.947115 ACTCCAAAAATCCGAAAGATACTTAAG 58.053 33.333 0.00 0.00 33.66 1.85
2361 3486 8.857694 ACTCCAAAAATCCGAAAGATACTTAA 57.142 30.769 0.00 0.00 33.66 1.85
2362 3487 9.595823 CTACTCCAAAAATCCGAAAGATACTTA 57.404 33.333 0.00 0.00 33.66 2.24
2363 3488 8.101419 ACTACTCCAAAAATCCGAAAGATACTT 58.899 33.333 0.00 0.00 33.66 2.24
2364 3489 7.621796 ACTACTCCAAAAATCCGAAAGATACT 58.378 34.615 0.00 0.00 33.66 2.12
2365 3490 7.845066 ACTACTCCAAAAATCCGAAAGATAC 57.155 36.000 0.00 0.00 33.66 2.24
2368 3493 9.947433 TTATTACTACTCCAAAAATCCGAAAGA 57.053 29.630 0.00 0.00 0.00 2.52
2370 3495 9.729281 ACTTATTACTACTCCAAAAATCCGAAA 57.271 29.630 0.00 0.00 0.00 3.46
2371 3496 9.374838 GACTTATTACTACTCCAAAAATCCGAA 57.625 33.333 0.00 0.00 0.00 4.30
2372 3497 7.983484 GGACTTATTACTACTCCAAAAATCCGA 59.017 37.037 0.00 0.00 0.00 4.55
2373 3498 7.767198 TGGACTTATTACTACTCCAAAAATCCG 59.233 37.037 0.00 0.00 0.00 4.18
2374 3499 9.628500 ATGGACTTATTACTACTCCAAAAATCC 57.372 33.333 0.00 0.00 34.68 3.01
2377 3502 9.238368 CCAATGGACTTATTACTACTCCAAAAA 57.762 33.333 0.00 0.00 34.68 1.94
2378 3503 7.338449 GCCAATGGACTTATTACTACTCCAAAA 59.662 37.037 2.05 0.00 34.68 2.44
2379 3504 6.826741 GCCAATGGACTTATTACTACTCCAAA 59.173 38.462 2.05 0.00 34.68 3.28
2380 3505 6.069905 TGCCAATGGACTTATTACTACTCCAA 60.070 38.462 2.05 0.00 34.68 3.53
2381 3506 5.427157 TGCCAATGGACTTATTACTACTCCA 59.573 40.000 2.05 0.00 35.49 3.86
2382 3507 5.925509 TGCCAATGGACTTATTACTACTCC 58.074 41.667 2.05 0.00 0.00 3.85
2383 3508 7.465513 CGTTTGCCAATGGACTTATTACTACTC 60.466 40.741 2.05 0.00 0.00 2.59
2384 3509 6.315393 CGTTTGCCAATGGACTTATTACTACT 59.685 38.462 2.05 0.00 0.00 2.57
2385 3510 6.314400 TCGTTTGCCAATGGACTTATTACTAC 59.686 38.462 2.05 0.00 0.00 2.73
2386 3511 6.408035 TCGTTTGCCAATGGACTTATTACTA 58.592 36.000 2.05 0.00 0.00 1.82
2387 3512 5.250200 TCGTTTGCCAATGGACTTATTACT 58.750 37.500 2.05 0.00 0.00 2.24
2388 3513 5.353123 TCTCGTTTGCCAATGGACTTATTAC 59.647 40.000 2.05 0.00 0.00 1.89
2389 3514 5.492895 TCTCGTTTGCCAATGGACTTATTA 58.507 37.500 2.05 0.00 0.00 0.98
2390 3515 4.331968 TCTCGTTTGCCAATGGACTTATT 58.668 39.130 2.05 0.00 0.00 1.40
2391 3516 3.941483 CTCTCGTTTGCCAATGGACTTAT 59.059 43.478 2.05 0.00 0.00 1.73
2392 3517 3.244422 ACTCTCGTTTGCCAATGGACTTA 60.244 43.478 2.05 0.00 0.00 2.24
2393 3518 2.154462 CTCTCGTTTGCCAATGGACTT 58.846 47.619 2.05 0.00 0.00 3.01
2394 3519 1.072331 ACTCTCGTTTGCCAATGGACT 59.928 47.619 2.05 0.00 0.00 3.85
2395 3520 1.523758 ACTCTCGTTTGCCAATGGAC 58.476 50.000 2.05 0.00 0.00 4.02
2396 3521 2.301870 ACTACTCTCGTTTGCCAATGGA 59.698 45.455 2.05 0.00 0.00 3.41
2397 3522 2.699954 ACTACTCTCGTTTGCCAATGG 58.300 47.619 0.00 0.00 0.00 3.16
2398 3523 3.865745 CCTACTACTCTCGTTTGCCAATG 59.134 47.826 0.00 0.00 0.00 2.82
2399 3524 3.679083 GCCTACTACTCTCGTTTGCCAAT 60.679 47.826 0.00 0.00 0.00 3.16
2400 3525 2.353406 GCCTACTACTCTCGTTTGCCAA 60.353 50.000 0.00 0.00 0.00 4.52
2401 3526 1.203994 GCCTACTACTCTCGTTTGCCA 59.796 52.381 0.00 0.00 0.00 4.92
2402 3527 1.477295 AGCCTACTACTCTCGTTTGCC 59.523 52.381 0.00 0.00 0.00 4.52
2409 3534 4.214758 GCTAACAGCTAGCCTACTACTCTC 59.785 50.000 12.13 0.00 46.46 3.20
2421 3546 8.243426 TGAATTTGGTAATTTGCTAACAGCTAG 58.757 33.333 0.00 0.00 36.79 3.42
2422 3547 8.026607 GTGAATTTGGTAATTTGCTAACAGCTA 58.973 33.333 0.00 0.00 36.79 3.32
2423 3548 6.868339 GTGAATTTGGTAATTTGCTAACAGCT 59.132 34.615 0.00 0.00 36.79 4.24
2424 3549 6.644592 TGTGAATTTGGTAATTTGCTAACAGC 59.355 34.615 0.00 0.00 36.56 4.40
2425 3550 8.761575 ATGTGAATTTGGTAATTTGCTAACAG 57.238 30.769 0.00 0.00 34.16 3.16
2431 3556 7.008266 CGTGACTATGTGAATTTGGTAATTTGC 59.992 37.037 0.00 0.00 34.16 3.68
2434 3559 7.681939 ACGTGACTATGTGAATTTGGTAATT 57.318 32.000 0.00 0.00 36.68 1.40
2437 3562 6.927416 AGTACGTGACTATGTGAATTTGGTA 58.073 36.000 0.00 0.00 36.27 3.25
2442 3567 7.154435 AGTGTAGTACGTGACTATGTGAATT 57.846 36.000 0.00 0.00 42.69 2.17
2468 3604 2.125685 CAGAGCACGTCTCATGCATAG 58.874 52.381 0.00 0.00 45.92 2.23
2520 3660 5.657470 TGAATAGCTACGTGCATCAAATC 57.343 39.130 0.00 0.00 45.94 2.17
2521 3661 5.528690 ACATGAATAGCTACGTGCATCAAAT 59.471 36.000 0.00 0.00 45.94 2.32
2545 3685 5.529800 GGAATCTGTATTTTTAGGCGCCTTA 59.470 40.000 37.74 25.20 0.00 2.69
2570 3710 4.560427 GGTAGTGTTCGTTCCGTTTATCTC 59.440 45.833 0.00 0.00 0.00 2.75
2574 3714 2.288763 GGGGTAGTGTTCGTTCCGTTTA 60.289 50.000 0.00 0.00 0.00 2.01
2578 3718 0.389426 CAGGGGTAGTGTTCGTTCCG 60.389 60.000 0.00 0.00 0.00 4.30
2579 3719 0.672711 GCAGGGGTAGTGTTCGTTCC 60.673 60.000 0.00 0.00 0.00 3.62
2582 3722 1.412453 TTGGCAGGGGTAGTGTTCGT 61.412 55.000 0.00 0.00 0.00 3.85
2587 3727 0.250553 TCGTTTTGGCAGGGGTAGTG 60.251 55.000 0.00 0.00 0.00 2.74
2589 3729 1.065418 AGATCGTTTTGGCAGGGGTAG 60.065 52.381 0.00 0.00 0.00 3.18
2592 3732 1.937546 GCAGATCGTTTTGGCAGGGG 61.938 60.000 0.00 0.00 0.00 4.79
2595 3735 1.135315 CGGCAGATCGTTTTGGCAG 59.865 57.895 10.53 1.18 39.61 4.85
2596 3736 1.302112 TCGGCAGATCGTTTTGGCA 60.302 52.632 10.53 0.00 39.61 4.92
2598 3738 1.419922 CGTCGGCAGATCGTTTTGG 59.580 57.895 0.00 0.00 0.00 3.28
2599 3739 1.225745 GCGTCGGCAGATCGTTTTG 60.226 57.895 9.56 0.00 39.62 2.44
2617 3757 4.465512 GCAAGACACATGGCGGCG 62.466 66.667 0.51 0.51 0.00 6.46
2619 3759 1.311859 ATATGCAAGACACATGGCGG 58.688 50.000 0.00 0.00 0.00 6.13
2620 3760 2.871633 TGTATATGCAAGACACATGGCG 59.128 45.455 0.00 0.00 0.00 5.69
2621 3761 5.217393 CAATGTATATGCAAGACACATGGC 58.783 41.667 0.00 0.00 30.55 4.40
2629 3769 7.416213 GCCAAGGTTTACAATGTATATGCAAGA 60.416 37.037 0.00 0.00 0.00 3.02
2631 3771 6.379703 AGCCAAGGTTTACAATGTATATGCAA 59.620 34.615 0.00 0.00 0.00 4.08
2634 3774 6.545666 TCCAGCCAAGGTTTACAATGTATATG 59.454 38.462 0.00 0.00 0.00 1.78
2643 3912 4.216687 CGTTTATTCCAGCCAAGGTTTACA 59.783 41.667 0.00 0.00 0.00 2.41
2644 3913 4.380128 CCGTTTATTCCAGCCAAGGTTTAC 60.380 45.833 0.00 0.00 0.00 2.01
2648 3917 1.615919 CCCGTTTATTCCAGCCAAGGT 60.616 52.381 0.00 0.00 0.00 3.50
2658 3927 3.674955 GCCATGTTGGTTCCCGTTTATTC 60.675 47.826 0.00 0.00 40.46 1.75
2661 3930 1.249407 GCCATGTTGGTTCCCGTTTA 58.751 50.000 0.00 0.00 40.46 2.01
2729 4003 5.388225 TGCTTCAAAGAAAAATTTCACGC 57.612 34.783 8.47 0.00 39.61 5.34
2730 4004 8.825064 AAAATGCTTCAAAGAAAAATTTCACG 57.175 26.923 8.47 0.00 39.61 4.35
2884 4362 2.736721 CCAAGATGTAATATCACGCCGG 59.263 50.000 0.00 0.00 0.00 6.13
2896 4374 3.006940 GACGCCATTTGTCCAAGATGTA 58.993 45.455 0.00 0.00 0.00 2.29
2908 4386 1.613437 CTGACCTTTTGGACGCCATTT 59.387 47.619 0.00 0.00 44.07 2.32
2919 4865 2.225091 TGGCACATGATCCTGACCTTTT 60.225 45.455 0.00 0.00 0.00 2.27
2923 4871 0.035152 TGTGGCACATGATCCTGACC 60.035 55.000 17.96 6.46 44.52 4.02
2939 4890 0.644843 GGCTTTGTTGCGTTTGTGTG 59.355 50.000 0.00 0.00 0.00 3.82
2981 4961 1.747355 GTGTCCATCTCCAAATGCCTG 59.253 52.381 0.00 0.00 0.00 4.85
2987 4967 1.003118 CCTTCGGTGTCCATCTCCAAA 59.997 52.381 0.00 0.00 0.00 3.28
3050 5032 2.041081 CCCCCAAAATGTCACTAGTGGA 59.959 50.000 22.48 10.24 0.00 4.02
3066 5072 3.089874 CTCGGAGATTGGCCCCCA 61.090 66.667 0.00 0.00 33.89 4.96
3069 5075 2.631012 AATGCCTCGGAGATTGGCCC 62.631 60.000 6.58 0.00 45.91 5.80
3077 5083 1.410517 TGCTCTAGAAATGCCTCGGAG 59.589 52.381 0.00 0.00 0.00 4.63
3099 5105 3.057548 CCTGCAACATGCTCCGCA 61.058 61.111 3.78 0.00 45.31 5.69
3100 5106 2.747460 TCCTGCAACATGCTCCGC 60.747 61.111 3.78 0.00 45.31 5.54
3101 5107 1.672030 TGTCCTGCAACATGCTCCG 60.672 57.895 3.78 0.00 45.31 4.63
3102 5108 0.607489 AGTGTCCTGCAACATGCTCC 60.607 55.000 3.78 0.00 45.31 4.70
3103 5109 0.520404 CAGTGTCCTGCAACATGCTC 59.480 55.000 3.78 0.00 45.31 4.26
3104 5110 0.109153 TCAGTGTCCTGCAACATGCT 59.891 50.000 3.78 0.00 45.31 3.79
3105 5111 0.953727 TTCAGTGTCCTGCAACATGC 59.046 50.000 0.00 0.00 45.29 4.06
3106 5112 2.620115 AGTTTCAGTGTCCTGCAACATG 59.380 45.455 7.71 0.00 44.26 3.21
3107 5113 2.936202 AGTTTCAGTGTCCTGCAACAT 58.064 42.857 7.71 0.00 44.26 2.71
3108 5114 2.418368 AGTTTCAGTGTCCTGCAACA 57.582 45.000 7.71 0.00 44.26 3.33
3109 5115 2.796032 GCAAGTTTCAGTGTCCTGCAAC 60.796 50.000 0.00 0.00 42.80 4.17
3110 5116 1.405105 GCAAGTTTCAGTGTCCTGCAA 59.595 47.619 0.00 0.00 38.66 4.08
3111 5117 1.024271 GCAAGTTTCAGTGTCCTGCA 58.976 50.000 0.00 0.00 38.66 4.41
3112 5118 0.312102 GGCAAGTTTCAGTGTCCTGC 59.688 55.000 0.00 0.00 38.66 4.85
3113 5119 0.588252 CGGCAAGTTTCAGTGTCCTG 59.412 55.000 0.00 0.00 40.25 3.86
3114 5120 0.535102 CCGGCAAGTTTCAGTGTCCT 60.535 55.000 0.00 0.00 0.00 3.85
3115 5121 1.949257 CCGGCAAGTTTCAGTGTCC 59.051 57.895 0.00 0.00 0.00 4.02
3116 5122 1.282875 GCCGGCAAGTTTCAGTGTC 59.717 57.895 24.80 0.00 0.00 3.67
3117 5123 0.823356 ATGCCGGCAAGTTTCAGTGT 60.823 50.000 36.33 10.11 0.00 3.55
3118 5124 0.387622 CATGCCGGCAAGTTTCAGTG 60.388 55.000 36.33 20.84 0.00 3.66
3119 5125 1.526575 CCATGCCGGCAAGTTTCAGT 61.527 55.000 36.33 11.92 0.00 3.41
3120 5126 1.213537 CCATGCCGGCAAGTTTCAG 59.786 57.895 36.33 12.13 0.00 3.02
3121 5127 1.530419 ACCATGCCGGCAAGTTTCA 60.530 52.632 36.33 8.35 39.03 2.69
3122 5128 1.080569 CACCATGCCGGCAAGTTTC 60.081 57.895 36.33 0.00 39.03 2.78
3123 5129 3.050339 CACCATGCCGGCAAGTTT 58.950 55.556 36.33 15.14 39.03 2.66
3124 5130 3.683937 GCACCATGCCGGCAAGTT 61.684 61.111 36.33 16.34 37.42 2.66
3125 5131 4.972733 TGCACCATGCCGGCAAGT 62.973 61.111 36.33 29.92 44.23 3.16
3126 5132 3.682885 TTGCACCATGCCGGCAAG 61.683 61.111 36.33 30.02 44.23 4.01
3239 5245 2.821991 ACTTGCGTATATCCTGGCTC 57.178 50.000 0.00 0.00 0.00 4.70
4009 6566 4.250305 ACCGCGAAGTTGGCCAGT 62.250 61.111 8.23 0.00 0.00 4.00
4122 6680 0.611062 TCGACAACGTCCTCCTCCAT 60.611 55.000 0.00 0.00 40.69 3.41
4197 6755 1.468914 CAGTAGCACTGTAGCAGACGA 59.531 52.381 2.91 0.00 41.19 4.20
4505 7103 4.521130 TCACAGAGTTGACGCTTCTTAT 57.479 40.909 0.00 0.00 0.00 1.73
4534 7132 7.603180 TCTTAATACATACCAGCAGATGTCT 57.397 36.000 0.00 0.00 37.47 3.41
4545 7143 9.640963 CCTACATTACAGCTCTTAATACATACC 57.359 37.037 0.00 0.00 0.00 2.73
4580 7178 7.867403 CCTTCACATTATTTAGTGTTGCAAAGT 59.133 33.333 0.00 0.00 37.07 2.66
4658 7258 4.145052 ACAAAGTTGAATCCTTCACTCCC 58.855 43.478 0.00 0.00 39.87 4.30
4679 7279 8.137437 TGAATCCTTCACAATCTTCTCAAAAAC 58.863 33.333 0.00 0.00 34.08 2.43
4730 7330 2.597217 CAAGTCAAGCCCCGCCAA 60.597 61.111 0.00 0.00 0.00 4.52
4765 7365 4.399395 TCTTGCTGCTGCCCTCCG 62.399 66.667 13.47 0.00 38.71 4.63
4766 7366 2.749441 GTCTTGCTGCTGCCCTCC 60.749 66.667 13.47 0.00 38.71 4.30
4767 7367 3.123620 CGTCTTGCTGCTGCCCTC 61.124 66.667 13.47 0.71 38.71 4.30
4768 7368 3.946201 ACGTCTTGCTGCTGCCCT 61.946 61.111 13.47 0.00 38.71 5.19
4769 7369 3.730761 CACGTCTTGCTGCTGCCC 61.731 66.667 13.47 0.00 38.71 5.36
4770 7370 3.730761 CCACGTCTTGCTGCTGCC 61.731 66.667 13.47 0.00 38.71 4.85
4771 7371 2.666190 TCCACGTCTTGCTGCTGC 60.666 61.111 8.89 8.89 40.20 5.25
4772 7372 0.390866 ATCTCCACGTCTTGCTGCTG 60.391 55.000 0.00 0.00 0.00 4.41
4773 7373 0.390866 CATCTCCACGTCTTGCTGCT 60.391 55.000 0.00 0.00 0.00 4.24
4774 7374 0.390340 TCATCTCCACGTCTTGCTGC 60.390 55.000 0.00 0.00 0.00 5.25
4775 7375 1.354040 GTCATCTCCACGTCTTGCTG 58.646 55.000 0.00 0.00 0.00 4.41
4776 7376 0.247736 GGTCATCTCCACGTCTTGCT 59.752 55.000 0.00 0.00 0.00 3.91
4777 7377 0.247736 AGGTCATCTCCACGTCTTGC 59.752 55.000 0.00 0.00 0.00 4.01
4778 7378 1.273606 ACAGGTCATCTCCACGTCTTG 59.726 52.381 0.00 0.00 0.00 3.02
4779 7379 1.546476 GACAGGTCATCTCCACGTCTT 59.454 52.381 0.00 0.00 32.82 3.01
4780 7380 1.178276 GACAGGTCATCTCCACGTCT 58.822 55.000 0.00 0.00 32.82 4.18
4781 7381 0.888619 TGACAGGTCATCTCCACGTC 59.111 55.000 0.00 0.00 34.14 4.34
4782 7382 1.273606 CTTGACAGGTCATCTCCACGT 59.726 52.381 2.52 0.00 39.64 4.49
4783 7383 1.546029 TCTTGACAGGTCATCTCCACG 59.454 52.381 2.52 0.00 39.64 4.94
4784 7384 2.672478 CGTCTTGACAGGTCATCTCCAC 60.672 54.545 2.52 0.00 39.64 4.02
4785 7385 1.546029 CGTCTTGACAGGTCATCTCCA 59.454 52.381 2.52 0.00 39.64 3.86
4786 7386 1.819288 TCGTCTTGACAGGTCATCTCC 59.181 52.381 2.52 0.00 39.64 3.71
4797 7397 1.043224 CTCGTGTTCGTCGTCTTGAC 58.957 55.000 0.00 0.00 44.53 3.18
4798 7398 0.040692 CCTCGTGTTCGTCGTCTTGA 60.041 55.000 0.00 0.00 38.33 3.02
4799 7399 0.040692 TCCTCGTGTTCGTCGTCTTG 60.041 55.000 0.00 0.00 38.33 3.02
4800 7400 0.664761 TTCCTCGTGTTCGTCGTCTT 59.335 50.000 0.00 0.00 38.33 3.01
4801 7401 0.664761 TTTCCTCGTGTTCGTCGTCT 59.335 50.000 0.00 0.00 38.33 4.18
4802 7402 1.050767 CTTTCCTCGTGTTCGTCGTC 58.949 55.000 0.00 0.00 38.33 4.20
4803 7403 0.938168 GCTTTCCTCGTGTTCGTCGT 60.938 55.000 0.00 0.00 38.33 4.34
4804 7404 0.937699 TGCTTTCCTCGTGTTCGTCG 60.938 55.000 0.00 0.00 38.33 5.12
4805 7405 1.126846 CATGCTTTCCTCGTGTTCGTC 59.873 52.381 0.00 0.00 38.33 4.20
4806 7406 1.148310 CATGCTTTCCTCGTGTTCGT 58.852 50.000 0.00 0.00 38.33 3.85
4807 7407 0.179215 GCATGCTTTCCTCGTGTTCG 60.179 55.000 11.37 0.00 38.55 3.95
4808 7408 0.169009 GGCATGCTTTCCTCGTGTTC 59.831 55.000 18.92 0.00 0.00 3.18
4809 7409 1.577328 CGGCATGCTTTCCTCGTGTT 61.577 55.000 18.92 0.00 0.00 3.32
4810 7410 2.034879 CGGCATGCTTTCCTCGTGT 61.035 57.895 18.92 0.00 0.00 4.49
4811 7411 2.753966 CCGGCATGCTTTCCTCGTG 61.754 63.158 18.92 2.18 0.00 4.35
4812 7412 2.257409 ATCCGGCATGCTTTCCTCGT 62.257 55.000 18.92 0.00 0.00 4.18
4813 7413 0.249868 TATCCGGCATGCTTTCCTCG 60.250 55.000 18.92 11.18 0.00 4.63
4814 7414 1.202698 AGTATCCGGCATGCTTTCCTC 60.203 52.381 18.92 5.09 0.00 3.71
4815 7415 0.839946 AGTATCCGGCATGCTTTCCT 59.160 50.000 18.92 3.60 0.00 3.36
4816 7416 1.604278 GAAGTATCCGGCATGCTTTCC 59.396 52.381 18.92 0.00 37.54 3.13
4817 7417 1.604278 GGAAGTATCCGGCATGCTTTC 59.396 52.381 18.92 11.01 37.54 2.62
4818 7418 1.680338 GGAAGTATCCGGCATGCTTT 58.320 50.000 18.92 2.63 37.54 3.51
4819 7419 3.403936 GGAAGTATCCGGCATGCTT 57.596 52.632 18.92 13.94 39.94 3.91
4828 7428 3.693085 TCGCGGTATCTATGGAAGTATCC 59.307 47.826 6.13 0.00 46.76 2.59
4829 7429 4.395542 AGTCGCGGTATCTATGGAAGTATC 59.604 45.833 6.13 0.00 0.00 2.24
4830 7430 4.333690 AGTCGCGGTATCTATGGAAGTAT 58.666 43.478 6.13 0.00 0.00 2.12
4831 7431 3.748083 AGTCGCGGTATCTATGGAAGTA 58.252 45.455 6.13 0.00 0.00 2.24
4832 7432 2.584236 AGTCGCGGTATCTATGGAAGT 58.416 47.619 6.13 0.00 0.00 3.01
4833 7433 3.309388 CAAGTCGCGGTATCTATGGAAG 58.691 50.000 6.13 0.00 0.00 3.46
4834 7434 2.035449 CCAAGTCGCGGTATCTATGGAA 59.965 50.000 6.13 0.00 0.00 3.53
4835 7435 1.611977 CCAAGTCGCGGTATCTATGGA 59.388 52.381 6.13 0.00 0.00 3.41
4836 7436 1.336887 CCCAAGTCGCGGTATCTATGG 60.337 57.143 6.13 5.67 0.00 2.74
4837 7437 1.611977 TCCCAAGTCGCGGTATCTATG 59.388 52.381 6.13 0.00 0.00 2.23
4838 7438 1.612463 GTCCCAAGTCGCGGTATCTAT 59.388 52.381 6.13 0.00 0.00 1.98
4839 7439 1.027357 GTCCCAAGTCGCGGTATCTA 58.973 55.000 6.13 0.00 0.00 1.98
4840 7440 0.968901 TGTCCCAAGTCGCGGTATCT 60.969 55.000 6.13 0.00 0.00 1.98
4841 7441 0.104304 ATGTCCCAAGTCGCGGTATC 59.896 55.000 6.13 0.00 0.00 2.24
4842 7442 0.179084 CATGTCCCAAGTCGCGGTAT 60.179 55.000 6.13 0.00 0.00 2.73
4843 7443 1.216977 CATGTCCCAAGTCGCGGTA 59.783 57.895 6.13 0.00 0.00 4.02
4844 7444 2.047274 CATGTCCCAAGTCGCGGT 60.047 61.111 6.13 0.00 0.00 5.68
4845 7445 3.499737 GCATGTCCCAAGTCGCGG 61.500 66.667 6.13 0.00 0.00 6.46
4846 7446 2.434884 AGCATGTCCCAAGTCGCG 60.435 61.111 0.00 0.00 0.00 5.87
4847 7447 2.401766 CCAGCATGTCCCAAGTCGC 61.402 63.158 0.00 0.00 0.00 5.19
4848 7448 1.746615 CCCAGCATGTCCCAAGTCG 60.747 63.158 0.00 0.00 0.00 4.18
4849 7449 0.393537 CTCCCAGCATGTCCCAAGTC 60.394 60.000 0.00 0.00 0.00 3.01
4850 7450 1.687612 CTCCCAGCATGTCCCAAGT 59.312 57.895 0.00 0.00 0.00 3.16
4851 7451 1.751927 GCTCCCAGCATGTCCCAAG 60.752 63.158 0.00 0.00 41.89 3.61
4852 7452 2.356278 GCTCCCAGCATGTCCCAA 59.644 61.111 0.00 0.00 41.89 4.12
4861 7461 0.750911 CATCCTCCTTTGCTCCCAGC 60.751 60.000 0.00 0.00 42.82 4.85
4862 7462 0.914644 TCATCCTCCTTTGCTCCCAG 59.085 55.000 0.00 0.00 0.00 4.45
4863 7463 0.914644 CTCATCCTCCTTTGCTCCCA 59.085 55.000 0.00 0.00 0.00 4.37
4864 7464 1.207791 TCTCATCCTCCTTTGCTCCC 58.792 55.000 0.00 0.00 0.00 4.30
4865 7465 2.848691 CATCTCATCCTCCTTTGCTCC 58.151 52.381 0.00 0.00 0.00 4.70
4866 7466 2.220313 GCATCTCATCCTCCTTTGCTC 58.780 52.381 0.00 0.00 0.00 4.26
4867 7467 1.133853 GGCATCTCATCCTCCTTTGCT 60.134 52.381 0.00 0.00 0.00 3.91
4868 7468 1.316651 GGCATCTCATCCTCCTTTGC 58.683 55.000 0.00 0.00 0.00 3.68
4869 7469 1.590932 CGGCATCTCATCCTCCTTTG 58.409 55.000 0.00 0.00 0.00 2.77
4870 7470 0.471617 CCGGCATCTCATCCTCCTTT 59.528 55.000 0.00 0.00 0.00 3.11
4871 7471 0.692419 ACCGGCATCTCATCCTCCTT 60.692 55.000 0.00 0.00 0.00 3.36
4872 7472 1.074926 ACCGGCATCTCATCCTCCT 60.075 57.895 0.00 0.00 0.00 3.69
4873 7473 1.070445 CACCGGCATCTCATCCTCC 59.930 63.158 0.00 0.00 0.00 4.30
4874 7474 1.070445 CCACCGGCATCTCATCCTC 59.930 63.158 0.00 0.00 0.00 3.71
4875 7475 1.383109 TCCACCGGCATCTCATCCT 60.383 57.895 0.00 0.00 0.00 3.24
4876 7476 1.227674 GTCCACCGGCATCTCATCC 60.228 63.158 0.00 0.00 0.00 3.51
4877 7477 0.107456 ATGTCCACCGGCATCTCATC 59.893 55.000 0.00 0.00 0.00 2.92
4878 7478 0.179037 CATGTCCACCGGCATCTCAT 60.179 55.000 0.00 0.00 0.00 2.90
4879 7479 1.221566 CATGTCCACCGGCATCTCA 59.778 57.895 0.00 0.00 0.00 3.27
4880 7480 1.524621 CCATGTCCACCGGCATCTC 60.525 63.158 0.00 0.00 0.00 2.75
4881 7481 2.591753 CCATGTCCACCGGCATCT 59.408 61.111 0.00 0.00 0.00 2.90
4882 7482 3.211963 GCCATGTCCACCGGCATC 61.212 66.667 0.00 0.00 45.52 3.91
4885 7485 4.820744 ATGGCCATGTCCACCGGC 62.821 66.667 20.04 0.00 45.47 6.13
4886 7486 2.829914 CATGGCCATGTCCACCGG 60.830 66.667 33.68 9.26 39.25 5.28
4887 7487 3.520862 GCATGGCCATGTCCACCG 61.521 66.667 39.08 18.53 40.80 4.94
4905 7505 4.907034 CGATCAGACCCGCGTCCG 62.907 72.222 4.92 0.00 40.12 4.79
4912 7512 4.593864 GAGGCCGCGATCAGACCC 62.594 72.222 8.23 0.00 0.00 4.46
4913 7513 4.933064 CGAGGCCGCGATCAGACC 62.933 72.222 25.87 0.00 0.00 3.85
4914 7514 4.933064 CCGAGGCCGCGATCAGAC 62.933 72.222 31.46 0.00 0.00 3.51
4916 7516 4.637489 CTCCGAGGCCGCGATCAG 62.637 72.222 31.46 18.05 0.00 2.90
4930 7530 4.087892 TCAGAAGCAGCCGCCTCC 62.088 66.667 0.00 0.00 39.83 4.30
4931 7531 2.511145 CTCAGAAGCAGCCGCCTC 60.511 66.667 0.00 0.00 39.83 4.70
4941 7541 3.131933 AGTGCTACCTACATGCTCAGAAG 59.868 47.826 0.00 0.00 0.00 2.85
4942 7542 3.099905 AGTGCTACCTACATGCTCAGAA 58.900 45.455 0.00 0.00 0.00 3.02
4943 7543 2.690497 GAGTGCTACCTACATGCTCAGA 59.310 50.000 0.00 0.00 0.00 3.27
4944 7544 2.223923 GGAGTGCTACCTACATGCTCAG 60.224 54.545 0.00 0.00 0.00 3.35
4945 7545 1.757118 GGAGTGCTACCTACATGCTCA 59.243 52.381 0.00 0.00 0.00 4.26
4946 7546 1.069358 GGGAGTGCTACCTACATGCTC 59.931 57.143 0.00 0.00 0.00 4.26
4947 7547 1.123928 GGGAGTGCTACCTACATGCT 58.876 55.000 0.00 0.00 0.00 3.79
4948 7548 0.830648 TGGGAGTGCTACCTACATGC 59.169 55.000 1.72 0.00 33.61 4.06
4949 7549 2.111384 AGTGGGAGTGCTACCTACATG 58.889 52.381 1.72 0.00 40.54 3.21
4950 7550 2.111384 CAGTGGGAGTGCTACCTACAT 58.889 52.381 1.72 0.00 40.54 2.29
4951 7551 1.557099 CAGTGGGAGTGCTACCTACA 58.443 55.000 1.72 0.00 40.54 2.74
4952 7552 0.175989 GCAGTGGGAGTGCTACCTAC 59.824 60.000 1.72 0.00 41.22 3.18
4953 7553 2.591915 GCAGTGGGAGTGCTACCTA 58.408 57.895 1.72 0.00 41.22 3.08
4954 7554 3.393360 GCAGTGGGAGTGCTACCT 58.607 61.111 1.72 0.00 41.22 3.08
4959 7559 2.029844 GAACGAGCAGTGGGAGTGC 61.030 63.158 0.00 0.00 44.65 4.40
4960 7560 1.374758 GGAACGAGCAGTGGGAGTG 60.375 63.158 0.00 0.00 0.00 3.51
4961 7561 1.122019 AAGGAACGAGCAGTGGGAGT 61.122 55.000 0.00 0.00 0.00 3.85
4962 7562 0.671781 CAAGGAACGAGCAGTGGGAG 60.672 60.000 0.00 0.00 0.00 4.30
4963 7563 1.371183 CAAGGAACGAGCAGTGGGA 59.629 57.895 0.00 0.00 0.00 4.37
4964 7564 1.672356 CCAAGGAACGAGCAGTGGG 60.672 63.158 0.00 0.00 0.00 4.61
4965 7565 0.671781 CTCCAAGGAACGAGCAGTGG 60.672 60.000 0.00 0.00 0.00 4.00
4966 7566 0.318441 TCTCCAAGGAACGAGCAGTG 59.682 55.000 0.00 0.00 0.00 3.66
4967 7567 1.048601 TTCTCCAAGGAACGAGCAGT 58.951 50.000 0.00 0.00 0.00 4.40
4968 7568 2.169832 TTTCTCCAAGGAACGAGCAG 57.830 50.000 0.00 0.00 0.00 4.24
4969 7569 2.303022 AGATTTCTCCAAGGAACGAGCA 59.697 45.455 0.00 0.00 0.00 4.26
4970 7570 2.979240 AGATTTCTCCAAGGAACGAGC 58.021 47.619 0.00 0.00 0.00 5.03
4971 7571 5.470098 TCAAAAGATTTCTCCAAGGAACGAG 59.530 40.000 0.00 0.00 0.00 4.18
4972 7572 5.373222 TCAAAAGATTTCTCCAAGGAACGA 58.627 37.500 0.00 0.00 0.00 3.85
4973 7573 5.689383 TCAAAAGATTTCTCCAAGGAACG 57.311 39.130 0.00 0.00 0.00 3.95
4974 7574 7.219484 TGATCAAAAGATTTCTCCAAGGAAC 57.781 36.000 0.00 0.00 0.00 3.62
4975 7575 7.838079 TTGATCAAAAGATTTCTCCAAGGAA 57.162 32.000 5.45 0.00 0.00 3.36
4976 7576 9.705103 ATATTGATCAAAAGATTTCTCCAAGGA 57.295 29.630 13.09 0.00 0.00 3.36
4977 7577 9.745880 CATATTGATCAAAAGATTTCTCCAAGG 57.254 33.333 13.09 0.00 0.00 3.61
4978 7578 9.745880 CCATATTGATCAAAAGATTTCTCCAAG 57.254 33.333 13.09 0.00 0.00 3.61
4979 7579 8.199449 GCCATATTGATCAAAAGATTTCTCCAA 58.801 33.333 13.09 0.00 0.00 3.53
4980 7580 7.562454 AGCCATATTGATCAAAAGATTTCTCCA 59.438 33.333 13.09 0.00 0.00 3.86
4981 7581 7.949434 AGCCATATTGATCAAAAGATTTCTCC 58.051 34.615 13.09 0.00 0.00 3.71
4982 7582 8.081025 GGAGCCATATTGATCAAAAGATTTCTC 58.919 37.037 13.09 12.12 0.00 2.87
4983 7583 7.562454 TGGAGCCATATTGATCAAAAGATTTCT 59.438 33.333 13.09 4.21 0.00 2.52
4984 7584 7.719483 TGGAGCCATATTGATCAAAAGATTTC 58.281 34.615 13.09 6.95 0.00 2.17
4985 7585 7.664552 TGGAGCCATATTGATCAAAAGATTT 57.335 32.000 13.09 0.00 0.00 2.17
4986 7586 7.418254 GGTTGGAGCCATATTGATCAAAAGATT 60.418 37.037 13.09 0.00 0.00 2.40
4987 7587 6.041296 GGTTGGAGCCATATTGATCAAAAGAT 59.959 38.462 13.09 3.73 0.00 2.40
4988 7588 5.360714 GGTTGGAGCCATATTGATCAAAAGA 59.639 40.000 13.09 1.25 0.00 2.52
4989 7589 5.361857 AGGTTGGAGCCATATTGATCAAAAG 59.638 40.000 13.09 5.27 0.00 2.27
4990 7590 5.271598 AGGTTGGAGCCATATTGATCAAAA 58.728 37.500 13.09 0.00 0.00 2.44
4991 7591 4.870636 AGGTTGGAGCCATATTGATCAAA 58.129 39.130 13.09 2.57 0.00 2.69
4992 7592 4.079844 TGAGGTTGGAGCCATATTGATCAA 60.080 41.667 11.26 11.26 0.00 2.57
4993 7593 3.459227 TGAGGTTGGAGCCATATTGATCA 59.541 43.478 0.00 0.00 0.00 2.92
4994 7594 4.090761 TGAGGTTGGAGCCATATTGATC 57.909 45.455 0.00 0.00 0.00 2.92
4995 7595 4.467769 CTTGAGGTTGGAGCCATATTGAT 58.532 43.478 0.00 0.00 0.00 2.57
4996 7596 3.371917 CCTTGAGGTTGGAGCCATATTGA 60.372 47.826 0.00 0.00 0.00 2.57
4997 7597 2.954318 CCTTGAGGTTGGAGCCATATTG 59.046 50.000 0.00 0.00 0.00 1.90
4998 7598 2.687914 GCCTTGAGGTTGGAGCCATATT 60.688 50.000 0.00 0.00 37.57 1.28
4999 7599 1.133668 GCCTTGAGGTTGGAGCCATAT 60.134 52.381 0.00 0.00 37.57 1.78
5000 7600 0.255890 GCCTTGAGGTTGGAGCCATA 59.744 55.000 0.00 0.00 37.57 2.74
5001 7601 1.000396 GCCTTGAGGTTGGAGCCAT 60.000 57.895 0.00 0.00 37.57 4.40
5002 7602 2.436109 GCCTTGAGGTTGGAGCCA 59.564 61.111 0.00 0.00 37.57 4.75
5003 7603 2.361737 GGCCTTGAGGTTGGAGCC 60.362 66.667 0.00 0.00 37.57 4.70
5004 7604 2.361737 GGGCCTTGAGGTTGGAGC 60.362 66.667 0.84 0.00 37.57 4.70
5005 7605 1.301293 GAGGGCCTTGAGGTTGGAG 59.699 63.158 7.89 0.00 37.57 3.86
5006 7606 2.231380 GGAGGGCCTTGAGGTTGGA 61.231 63.158 7.89 0.00 37.57 3.53
5007 7607 2.356667 GGAGGGCCTTGAGGTTGG 59.643 66.667 7.89 0.00 37.57 3.77
5008 7608 2.234296 AGGGAGGGCCTTGAGGTTG 61.234 63.158 7.89 0.00 37.57 3.77
5009 7609 2.211279 AGGGAGGGCCTTGAGGTT 59.789 61.111 7.89 0.00 37.57 3.50
5010 7610 2.612115 CAGGGAGGGCCTTGAGGT 60.612 66.667 7.89 0.00 43.61 3.85
5011 7611 2.203549 GAACAGGGAGGGCCTTGAGG 62.204 65.000 7.89 0.52 43.61 3.86
5012 7612 1.301293 GAACAGGGAGGGCCTTGAG 59.699 63.158 7.89 0.56 43.61 3.02
5013 7613 2.231380 GGAACAGGGAGGGCCTTGA 61.231 63.158 7.89 0.00 43.61 3.02
5014 7614 2.203549 GAGGAACAGGGAGGGCCTTG 62.204 65.000 7.89 4.50 46.15 3.61
5015 7615 1.925972 GAGGAACAGGGAGGGCCTT 60.926 63.158 7.89 0.00 0.00 4.35
5016 7616 2.285743 GAGGAACAGGGAGGGCCT 60.286 66.667 5.25 5.25 0.00 5.19
5017 7617 3.412408 GGAGGAACAGGGAGGGCC 61.412 72.222 0.00 0.00 0.00 5.80
5018 7618 2.285743 AGGAGGAACAGGGAGGGC 60.286 66.667 0.00 0.00 0.00 5.19
5019 7619 2.674220 GCAGGAGGAACAGGGAGGG 61.674 68.421 0.00 0.00 0.00 4.30
5020 7620 2.674220 GGCAGGAGGAACAGGGAGG 61.674 68.421 0.00 0.00 0.00 4.30
5021 7621 1.614824 AGGCAGGAGGAACAGGGAG 60.615 63.158 0.00 0.00 0.00 4.30
5022 7622 1.613630 GAGGCAGGAGGAACAGGGA 60.614 63.158 0.00 0.00 0.00 4.20
5023 7623 1.614824 AGAGGCAGGAGGAACAGGG 60.615 63.158 0.00 0.00 0.00 4.45
5024 7624 1.601171 CAGAGGCAGGAGGAACAGG 59.399 63.158 0.00 0.00 0.00 4.00
5025 7625 1.078567 GCAGAGGCAGGAGGAACAG 60.079 63.158 0.00 0.00 40.72 3.16
5026 7626 1.537397 AGCAGAGGCAGGAGGAACA 60.537 57.895 0.00 0.00 44.61 3.18
5027 7627 1.078567 CAGCAGAGGCAGGAGGAAC 60.079 63.158 0.00 0.00 44.61 3.62
5028 7628 3.396767 CAGCAGAGGCAGGAGGAA 58.603 61.111 0.00 0.00 44.61 3.36
5034 7634 2.633509 GGCAAACCAGCAGAGGCAG 61.634 63.158 0.00 0.00 44.61 4.85
5035 7635 2.598394 GGCAAACCAGCAGAGGCA 60.598 61.111 0.00 0.00 44.61 4.75
5036 7636 2.282745 AGGCAAACCAGCAGAGGC 60.283 61.111 0.00 0.00 39.06 4.70
5037 7637 0.959372 CAGAGGCAAACCAGCAGAGG 60.959 60.000 0.00 0.00 39.06 3.69
5038 7638 0.250640 ACAGAGGCAAACCAGCAGAG 60.251 55.000 0.00 0.00 39.06 3.35
5039 7639 0.183492 AACAGAGGCAAACCAGCAGA 59.817 50.000 0.00 0.00 39.06 4.26
5040 7640 1.035139 AAACAGAGGCAAACCAGCAG 58.965 50.000 0.00 0.00 39.06 4.24
5041 7641 0.746063 CAAACAGAGGCAAACCAGCA 59.254 50.000 0.00 0.00 39.06 4.41
5042 7642 0.746659 ACAAACAGAGGCAAACCAGC 59.253 50.000 0.00 0.00 39.06 4.85
5043 7643 1.067516 CCACAAACAGAGGCAAACCAG 59.932 52.381 0.00 0.00 39.06 4.00
5044 7644 1.110442 CCACAAACAGAGGCAAACCA 58.890 50.000 0.00 0.00 39.06 3.67
5045 7645 3.965780 CCACAAACAGAGGCAAACC 57.034 52.632 0.00 0.00 0.00 3.27
5051 7651 0.322008 GAGGGAGCCACAAACAGAGG 60.322 60.000 0.00 0.00 0.00 3.69
5052 7652 0.671781 CGAGGGAGCCACAAACAGAG 60.672 60.000 0.00 0.00 0.00 3.35
5053 7653 1.371183 CGAGGGAGCCACAAACAGA 59.629 57.895 0.00 0.00 0.00 3.41
5054 7654 1.672356 CCGAGGGAGCCACAAACAG 60.672 63.158 0.00 0.00 0.00 3.16
5055 7655 2.429930 CCGAGGGAGCCACAAACA 59.570 61.111 0.00 0.00 0.00 2.83
5056 7656 3.056328 GCCGAGGGAGCCACAAAC 61.056 66.667 0.00 0.00 0.00 2.93
5057 7657 2.748058 GAAGCCGAGGGAGCCACAAA 62.748 60.000 0.00 0.00 0.00 2.83
5058 7658 3.249189 AAGCCGAGGGAGCCACAA 61.249 61.111 0.00 0.00 0.00 3.33
5059 7659 3.706373 GAAGCCGAGGGAGCCACA 61.706 66.667 0.00 0.00 0.00 4.17
5060 7660 4.821589 CGAAGCCGAGGGAGCCAC 62.822 72.222 0.00 0.00 38.22 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.