Multiple sequence alignment - TraesCS2D01G325600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G325600 chr2D 100.000 4041 0 0 1 4041 419039497 419043537 0.000000e+00 7463.0
1 TraesCS2D01G325600 chr2B 92.130 1512 92 17 2100 3596 491182645 491184144 0.000000e+00 2108.0
2 TraesCS2D01G325600 chr2B 94.527 1352 46 12 761 2095 491181093 491182433 0.000000e+00 2061.0
3 TraesCS2D01G325600 chr2B 89.406 623 51 5 1 609 491180478 491181099 0.000000e+00 771.0
4 TraesCS2D01G325600 chr2B 84.419 353 33 10 3707 4041 159609709 159610057 1.080000e-85 327.0
5 TraesCS2D01G325600 chr2B 83.562 365 29 15 3706 4041 33527206 33527568 3.030000e-81 313.0
6 TraesCS2D01G325600 chr2A 95.217 1338 42 5 775 2095 570785407 570784075 0.000000e+00 2097.0
7 TraesCS2D01G325600 chr2A 92.741 1295 76 11 2103 3384 570783858 570782569 0.000000e+00 1855.0
8 TraesCS2D01G325600 chr2A 93.760 609 37 1 1 609 570786028 570785421 0.000000e+00 913.0
9 TraesCS2D01G325600 chr2A 85.753 365 21 10 3707 4041 761296577 761296940 1.380000e-94 357.0
10 TraesCS2D01G325600 chr2A 84.658 365 24 14 3707 4041 6099494 6099856 6.470000e-88 335.0
11 TraesCS2D01G325600 chr3A 80.641 873 120 34 996 1844 32151800 32150953 7.370000e-177 630.0
12 TraesCS2D01G325600 chr3B 79.725 873 135 26 995 1844 40245592 40244739 9.670000e-166 593.0
13 TraesCS2D01G325600 chr3B 86.895 351 27 8 3709 4041 22357389 22357040 3.810000e-100 375.0
14 TraesCS2D01G325600 chr3B 100.000 151 0 0 608 758 815207173 815207023 3.080000e-71 279.0
15 TraesCS2D01G325600 chr3B 80.636 346 40 12 3711 4041 726993769 726994102 4.040000e-60 243.0
16 TraesCS2D01G325600 chr3D 84.380 589 70 16 996 1569 23063560 23062979 3.530000e-155 558.0
17 TraesCS2D01G325600 chr3D 87.393 349 23 9 3707 4037 504417657 504418002 8.200000e-102 381.0
18 TraesCS2D01G325600 chr3D 100.000 149 0 0 610 758 30037540 30037392 3.980000e-70 276.0
19 TraesCS2D01G325600 chr3D 86.620 142 19 0 1703 1844 23062854 23062713 1.500000e-34 158.0
20 TraesCS2D01G325600 chr4A 85.279 394 54 3 1023 1414 580908038 580907647 1.750000e-108 403.0
21 TraesCS2D01G325600 chr4A 86.607 112 15 0 2760 2871 580906795 580906684 1.520000e-24 124.0
22 TraesCS2D01G325600 chr4D 85.025 394 55 3 1023 1414 21888296 21887905 8.140000e-107 398.0
23 TraesCS2D01G325600 chr4D 87.252 353 24 9 3707 4041 495899777 495900126 2.280000e-102 383.0
24 TraesCS2D01G325600 chr4D 82.740 365 19 18 3707 4041 508497257 508497607 6.610000e-73 285.0
25 TraesCS2D01G325600 chr4D 87.500 112 14 0 2760 2871 21887023 21886912 3.280000e-26 130.0
26 TraesCS2D01G325600 chr4B 85.063 395 53 6 1023 1414 32806104 32806495 8.140000e-107 398.0
27 TraesCS2D01G325600 chr4B 87.500 112 14 0 2760 2871 32807359 32807470 3.280000e-26 130.0
28 TraesCS2D01G325600 chr7B 85.352 355 33 10 3701 4037 739964274 739963921 2.310000e-92 350.0
29 TraesCS2D01G325600 chr7B 82.727 110 19 0 1728 1837 292829136 292829245 9.240000e-17 99.0
30 TraesCS2D01G325600 chrUn 85.205 365 22 15 3707 4041 212969397 212969759 2.990000e-91 346.0
31 TraesCS2D01G325600 chrUn 84.932 365 24 13 3707 4041 194718236 194718599 1.390000e-89 340.0
32 TraesCS2D01G325600 chrUn 84.932 365 24 13 3707 4041 205408978 205409341 1.390000e-89 340.0
33 TraesCS2D01G325600 chrUn 84.932 365 24 13 3707 4041 348485549 348485912 1.390000e-89 340.0
34 TraesCS2D01G325600 chr6B 85.227 352 34 8 3707 4041 698112197 698111847 2.990000e-91 346.0
35 TraesCS2D01G325600 chr6B 91.111 225 16 3 3695 3917 702380679 702380901 6.560000e-78 302.0
36 TraesCS2D01G325600 chr6B 100.000 149 0 0 610 758 222858720 222858572 3.980000e-70 276.0
37 TraesCS2D01G325600 chr6B 99.333 150 1 0 609 758 177745591 177745442 5.150000e-69 272.0
38 TraesCS2D01G325600 chr1A 84.658 365 25 14 3707 4041 512344700 512344337 6.470000e-88 335.0
39 TraesCS2D01G325600 chr5B 83.621 348 36 6 3707 4036 599308433 599308089 1.410000e-79 307.0
40 TraesCS2D01G325600 chr5B 98.718 156 2 0 603 758 642290435 642290590 1.110000e-70 278.0
41 TraesCS2D01G325600 chr7A 83.526 346 37 5 3711 4037 620364138 620364482 5.070000e-79 305.0
42 TraesCS2D01G325600 chr7A 99.338 151 1 0 608 758 89629665 89629515 1.430000e-69 274.0
43 TraesCS2D01G325600 chr7A 82.727 110 19 0 1728 1837 386357098 386356989 9.240000e-17 99.0
44 TraesCS2D01G325600 chr6D 100.000 151 0 0 609 759 237770719 237770569 3.080000e-71 279.0
45 TraesCS2D01G325600 chr6A 96.053 152 6 0 607 758 615695896 615696047 8.670000e-62 248.0
46 TraesCS2D01G325600 chr7D 95.302 149 6 1 610 757 30855650 30855502 6.750000e-58 235.0
47 TraesCS2D01G325600 chr7D 81.818 110 20 0 1728 1837 356897476 356897585 4.300000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G325600 chr2D 419039497 419043537 4040 False 7463.000000 7463 100.0000 1 4041 1 chr2D.!!$F1 4040
1 TraesCS2D01G325600 chr2B 491180478 491184144 3666 False 1646.666667 2108 92.0210 1 3596 3 chr2B.!!$F3 3595
2 TraesCS2D01G325600 chr2A 570782569 570786028 3459 True 1621.666667 2097 93.9060 1 3384 3 chr2A.!!$R1 3383
3 TraesCS2D01G325600 chr3A 32150953 32151800 847 True 630.000000 630 80.6410 996 1844 1 chr3A.!!$R1 848
4 TraesCS2D01G325600 chr3B 40244739 40245592 853 True 593.000000 593 79.7250 995 1844 1 chr3B.!!$R2 849
5 TraesCS2D01G325600 chr3D 23062713 23063560 847 True 358.000000 558 85.5000 996 1844 2 chr3D.!!$R2 848
6 TraesCS2D01G325600 chr4A 580906684 580908038 1354 True 263.500000 403 85.9430 1023 2871 2 chr4A.!!$R1 1848
7 TraesCS2D01G325600 chr4D 21886912 21888296 1384 True 264.000000 398 86.2625 1023 2871 2 chr4D.!!$R1 1848
8 TraesCS2D01G325600 chr4B 32806104 32807470 1366 False 264.000000 398 86.2815 1023 2871 2 chr4B.!!$F1 1848

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
634 649 0.178301 TGCTACACAAACGACACCCA 59.822 50.0 0.00 0.00 0.00 4.51 F
752 767 0.179137 TCGCATCGGCTGTGAAGTAG 60.179 55.0 0.00 0.00 41.34 2.57 F
2529 2986 0.310854 GAACTTGGCCAACAGTTCGG 59.689 55.0 26.72 14.19 32.04 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2367 2824 0.741915 AACAAACACCCGCGTTCAAT 59.258 45.000 4.92 0.00 0.00 2.57 R
2643 3101 2.618794 TGAAAGTCCAAAATGGGCCAT 58.381 42.857 14.78 14.78 45.08 4.40 R
3453 3979 0.597568 CCCATTTTGTCAGCGCTTCA 59.402 50.000 7.50 7.70 0.00 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
126 137 4.520846 CAAATCTCGCCGCCGCAC 62.521 66.667 0.00 0.00 34.03 5.34
205 216 0.547712 CCCTTCCTCCCCTTCTGTCA 60.548 60.000 0.00 0.00 0.00 3.58
218 229 1.812922 CTGTCACCCTGATCTGCGC 60.813 63.158 0.00 0.00 0.00 6.09
259 271 1.327764 CGCTGAATTCTCGGGCTAAAC 59.672 52.381 7.05 0.00 0.00 2.01
283 295 5.681105 CCTGTTGTTTCGTACAGAATTGTTG 59.319 40.000 0.00 0.00 43.45 3.33
317 329 6.017109 AGTGAATGGTATTGTTATTGGATCGC 60.017 38.462 0.00 0.00 0.00 4.58
331 343 2.808598 ATCGCTGTGATCTACCCGT 58.191 52.632 0.00 0.00 28.49 5.28
372 384 2.808315 CACGTCGGATCCCCTCAG 59.192 66.667 6.06 0.00 0.00 3.35
425 437 4.842376 GGGAATTTCGTTACTTCGTTTTCG 59.158 41.667 0.00 0.00 45.64 3.46
471 486 4.060900 GCAGATTAGATCCGATGCTTTGA 58.939 43.478 0.00 0.00 0.00 2.69
513 528 3.157949 TCGGATATGCGGGGCACA 61.158 61.111 16.98 0.00 43.04 4.57
560 575 8.044309 TGTTATTTGTGCCAGTGTACAGTATAT 58.956 33.333 2.08 0.00 38.37 0.86
601 616 6.184789 TGTTTTCTGTATTTGGGGTCTATCC 58.815 40.000 0.00 0.00 0.00 2.59
609 624 3.622166 TTGGGGTCTATCCGAAAGAAC 57.378 47.619 0.00 0.00 37.00 3.01
610 625 2.542550 TGGGGTCTATCCGAAAGAACA 58.457 47.619 0.00 0.00 37.00 3.18
611 626 2.500098 TGGGGTCTATCCGAAAGAACAG 59.500 50.000 0.00 0.00 37.00 3.16
612 627 2.500504 GGGGTCTATCCGAAAGAACAGT 59.499 50.000 0.00 0.00 37.00 3.55
616 631 5.341617 GGTCTATCCGAAAGAACAGTAGTG 58.658 45.833 0.00 0.00 0.00 2.74
617 632 4.799428 GTCTATCCGAAAGAACAGTAGTGC 59.201 45.833 0.00 0.00 0.00 4.40
619 634 5.884232 TCTATCCGAAAGAACAGTAGTGCTA 59.116 40.000 0.00 0.00 30.07 3.49
620 635 4.170292 TCCGAAAGAACAGTAGTGCTAC 57.830 45.455 0.00 1.33 30.07 3.58
621 636 3.570975 TCCGAAAGAACAGTAGTGCTACA 59.429 43.478 11.39 0.00 38.48 2.74
622 637 3.673809 CCGAAAGAACAGTAGTGCTACAC 59.326 47.826 11.39 0.00 38.48 2.90
623 638 4.295870 CGAAAGAACAGTAGTGCTACACA 58.704 43.478 11.39 0.00 38.48 3.72
624 639 4.743151 CGAAAGAACAGTAGTGCTACACAA 59.257 41.667 11.39 0.00 38.48 3.33
625 640 5.233476 CGAAAGAACAGTAGTGCTACACAAA 59.767 40.000 11.39 0.00 38.48 2.83
626 641 5.986004 AAGAACAGTAGTGCTACACAAAC 57.014 39.130 11.39 0.00 38.48 2.93
627 642 4.049186 AGAACAGTAGTGCTACACAAACG 58.951 43.478 11.39 0.00 38.48 3.60
628 643 3.720949 ACAGTAGTGCTACACAAACGA 57.279 42.857 11.39 0.00 38.48 3.85
629 644 3.378339 ACAGTAGTGCTACACAAACGAC 58.622 45.455 11.39 0.00 38.48 4.34
630 645 3.181484 ACAGTAGTGCTACACAAACGACA 60.181 43.478 11.39 0.00 38.48 4.35
631 646 3.181774 CAGTAGTGCTACACAAACGACAC 59.818 47.826 11.39 0.00 38.48 3.67
632 647 1.578583 AGTGCTACACAAACGACACC 58.421 50.000 0.00 0.00 36.74 4.16
633 648 0.584876 GTGCTACACAAACGACACCC 59.415 55.000 0.00 0.00 34.08 4.61
634 649 0.178301 TGCTACACAAACGACACCCA 59.822 50.000 0.00 0.00 0.00 4.51
635 650 1.202710 TGCTACACAAACGACACCCAT 60.203 47.619 0.00 0.00 0.00 4.00
636 651 1.196808 GCTACACAAACGACACCCATG 59.803 52.381 0.00 0.00 0.00 3.66
637 652 1.196808 CTACACAAACGACACCCATGC 59.803 52.381 0.00 0.00 0.00 4.06
638 653 0.749818 ACACAAACGACACCCATGCA 60.750 50.000 0.00 0.00 0.00 3.96
639 654 0.317770 CACAAACGACACCCATGCAC 60.318 55.000 0.00 0.00 0.00 4.57
640 655 1.082169 CAAACGACACCCATGCACG 60.082 57.895 0.00 0.00 35.81 5.34
641 656 1.227704 AAACGACACCCATGCACGA 60.228 52.632 0.00 0.00 34.47 4.35
642 657 1.503818 AAACGACACCCATGCACGAC 61.504 55.000 0.00 0.00 34.47 4.34
643 658 2.048222 CGACACCCATGCACGACT 60.048 61.111 0.00 0.00 32.88 4.18
644 659 2.382746 CGACACCCATGCACGACTG 61.383 63.158 0.00 0.00 32.88 3.51
645 660 2.669569 ACACCCATGCACGACTGC 60.670 61.111 0.00 0.00 44.52 4.40
646 661 2.359107 CACCCATGCACGACTGCT 60.359 61.111 0.00 0.00 44.57 4.24
647 662 2.359107 ACCCATGCACGACTGCTG 60.359 61.111 0.00 0.00 44.57 4.41
648 663 3.807538 CCCATGCACGACTGCTGC 61.808 66.667 0.00 0.00 44.57 5.25
652 667 4.583866 TGCACGACTGCTGCACGA 62.584 61.111 17.81 0.00 44.57 4.35
653 668 3.114616 GCACGACTGCTGCACGAT 61.115 61.111 17.81 0.00 40.63 3.73
654 669 2.671177 GCACGACTGCTGCACGATT 61.671 57.895 17.81 0.00 40.63 3.34
655 670 1.417592 CACGACTGCTGCACGATTC 59.582 57.895 17.81 3.27 0.00 2.52
656 671 1.010935 CACGACTGCTGCACGATTCT 61.011 55.000 17.81 0.00 0.00 2.40
657 672 0.526211 ACGACTGCTGCACGATTCTA 59.474 50.000 17.81 0.00 0.00 2.10
658 673 0.917259 CGACTGCTGCACGATTCTAC 59.083 55.000 6.80 0.00 0.00 2.59
659 674 1.732405 CGACTGCTGCACGATTCTACA 60.732 52.381 6.80 0.00 0.00 2.74
660 675 1.656095 GACTGCTGCACGATTCTACAC 59.344 52.381 0.00 0.00 0.00 2.90
661 676 1.000843 ACTGCTGCACGATTCTACACA 59.999 47.619 0.00 0.00 0.00 3.72
662 677 2.274437 CTGCTGCACGATTCTACACAT 58.726 47.619 0.00 0.00 0.00 3.21
663 678 2.270923 TGCTGCACGATTCTACACATC 58.729 47.619 0.00 0.00 0.00 3.06
664 679 1.594862 GCTGCACGATTCTACACATCC 59.405 52.381 0.00 0.00 0.00 3.51
665 680 2.892374 CTGCACGATTCTACACATCCA 58.108 47.619 0.00 0.00 0.00 3.41
666 681 2.862536 CTGCACGATTCTACACATCCAG 59.137 50.000 0.00 0.00 0.00 3.86
667 682 1.594862 GCACGATTCTACACATCCAGC 59.405 52.381 0.00 0.00 0.00 4.85
668 683 2.205074 CACGATTCTACACATCCAGCC 58.795 52.381 0.00 0.00 0.00 4.85
669 684 1.831106 ACGATTCTACACATCCAGCCA 59.169 47.619 0.00 0.00 0.00 4.75
670 685 2.435805 ACGATTCTACACATCCAGCCAT 59.564 45.455 0.00 0.00 0.00 4.40
671 686 3.062763 CGATTCTACACATCCAGCCATC 58.937 50.000 0.00 0.00 0.00 3.51
672 687 3.493176 CGATTCTACACATCCAGCCATCA 60.493 47.826 0.00 0.00 0.00 3.07
673 688 3.998913 TTCTACACATCCAGCCATCAA 57.001 42.857 0.00 0.00 0.00 2.57
674 689 3.998913 TCTACACATCCAGCCATCAAA 57.001 42.857 0.00 0.00 0.00 2.69
675 690 4.299586 TCTACACATCCAGCCATCAAAA 57.700 40.909 0.00 0.00 0.00 2.44
676 691 4.858850 TCTACACATCCAGCCATCAAAAT 58.141 39.130 0.00 0.00 0.00 1.82
677 692 6.000246 TCTACACATCCAGCCATCAAAATA 58.000 37.500 0.00 0.00 0.00 1.40
678 693 6.604171 TCTACACATCCAGCCATCAAAATAT 58.396 36.000 0.00 0.00 0.00 1.28
679 694 7.062322 TCTACACATCCAGCCATCAAAATATT 58.938 34.615 0.00 0.00 0.00 1.28
680 695 5.909477 ACACATCCAGCCATCAAAATATTG 58.091 37.500 0.00 0.00 37.92 1.90
694 709 7.465353 TCAAAATATTGAATGAAGTCCAGCA 57.535 32.000 0.00 0.00 42.47 4.41
695 710 7.315142 TCAAAATATTGAATGAAGTCCAGCAC 58.685 34.615 0.00 0.00 42.47 4.40
696 711 5.490139 AATATTGAATGAAGTCCAGCACG 57.510 39.130 0.00 0.00 0.00 5.34
697 712 1.522668 TTGAATGAAGTCCAGCACGG 58.477 50.000 0.00 0.00 0.00 4.94
698 713 0.955428 TGAATGAAGTCCAGCACGGC 60.955 55.000 0.00 0.00 33.14 5.68
699 714 1.648467 GAATGAAGTCCAGCACGGCC 61.648 60.000 0.00 0.00 33.14 6.13
700 715 2.410322 AATGAAGTCCAGCACGGCCA 62.410 55.000 2.24 0.00 33.14 5.36
701 716 2.045926 GAAGTCCAGCACGGCCAT 60.046 61.111 2.24 0.00 33.14 4.40
702 717 1.675641 GAAGTCCAGCACGGCCATT 60.676 57.895 2.24 0.00 33.14 3.16
703 718 1.228552 AAGTCCAGCACGGCCATTT 60.229 52.632 2.24 0.00 33.14 2.32
704 719 1.526575 AAGTCCAGCACGGCCATTTG 61.527 55.000 2.24 0.00 33.14 2.32
705 720 1.971167 GTCCAGCACGGCCATTTGA 60.971 57.895 2.24 0.00 33.14 2.69
706 721 1.001020 TCCAGCACGGCCATTTGAT 60.001 52.632 2.24 0.00 33.14 2.57
707 722 1.031571 TCCAGCACGGCCATTTGATC 61.032 55.000 2.24 0.00 33.14 2.92
708 723 1.314534 CCAGCACGGCCATTTGATCA 61.315 55.000 2.24 0.00 0.00 2.92
709 724 0.742505 CAGCACGGCCATTTGATCAT 59.257 50.000 2.24 0.00 0.00 2.45
710 725 1.027357 AGCACGGCCATTTGATCATC 58.973 50.000 2.24 0.00 0.00 2.92
711 726 0.740149 GCACGGCCATTTGATCATCA 59.260 50.000 2.24 0.00 0.00 3.07
712 727 1.134753 GCACGGCCATTTGATCATCAA 59.865 47.619 2.24 0.00 34.03 2.57
713 728 2.223876 GCACGGCCATTTGATCATCAAT 60.224 45.455 2.24 0.00 36.11 2.57
714 729 3.635331 CACGGCCATTTGATCATCAATC 58.365 45.455 2.24 0.00 36.11 2.67
715 730 2.291465 ACGGCCATTTGATCATCAATCG 59.709 45.455 2.24 3.93 36.11 3.34
716 731 2.291465 CGGCCATTTGATCATCAATCGT 59.709 45.455 2.24 0.00 36.11 3.73
717 732 3.607775 CGGCCATTTGATCATCAATCGTC 60.608 47.826 2.24 0.00 36.11 4.20
718 733 3.304928 GGCCATTTGATCATCAATCGTCC 60.305 47.826 0.00 0.00 36.11 4.79
719 734 3.316029 GCCATTTGATCATCAATCGTCCA 59.684 43.478 0.00 0.00 36.11 4.02
720 735 4.022589 GCCATTTGATCATCAATCGTCCAT 60.023 41.667 0.00 0.00 36.11 3.41
721 736 5.458015 CCATTTGATCATCAATCGTCCATG 58.542 41.667 0.00 0.92 36.11 3.66
722 737 5.239963 CCATTTGATCATCAATCGTCCATGA 59.760 40.000 0.00 0.00 36.11 3.07
723 738 6.238814 CCATTTGATCATCAATCGTCCATGAA 60.239 38.462 0.00 0.00 36.11 2.57
724 739 6.947644 TTTGATCATCAATCGTCCATGAAT 57.052 33.333 0.00 0.00 36.11 2.57
725 740 6.549912 TTGATCATCAATCGTCCATGAATC 57.450 37.500 0.00 0.00 37.17 2.52
726 741 4.687483 TGATCATCAATCGTCCATGAATCG 59.313 41.667 0.00 0.00 37.17 3.34
727 742 4.058721 TCATCAATCGTCCATGAATCGT 57.941 40.909 0.00 0.00 0.00 3.73
728 743 4.051237 TCATCAATCGTCCATGAATCGTC 58.949 43.478 0.00 0.00 0.00 4.20
729 744 2.821546 TCAATCGTCCATGAATCGTCC 58.178 47.619 0.00 0.00 0.00 4.79
730 745 2.167487 TCAATCGTCCATGAATCGTCCA 59.833 45.455 0.00 0.00 0.00 4.02
731 746 3.133691 CAATCGTCCATGAATCGTCCAT 58.866 45.455 0.00 0.00 0.00 3.41
732 747 2.979814 TCGTCCATGAATCGTCCATT 57.020 45.000 0.00 0.00 0.00 3.16
733 748 3.260475 TCGTCCATGAATCGTCCATTT 57.740 42.857 0.00 0.00 0.00 2.32
734 749 3.194861 TCGTCCATGAATCGTCCATTTC 58.805 45.455 0.00 0.00 0.00 2.17
735 750 2.033747 CGTCCATGAATCGTCCATTTCG 60.034 50.000 0.00 0.00 0.00 3.46
736 751 1.939934 TCCATGAATCGTCCATTTCGC 59.060 47.619 0.00 0.00 0.00 4.70
737 752 1.670295 CCATGAATCGTCCATTTCGCA 59.330 47.619 0.00 0.00 0.00 5.10
738 753 2.291465 CCATGAATCGTCCATTTCGCAT 59.709 45.455 0.00 0.00 0.00 4.73
739 754 3.548587 CATGAATCGTCCATTTCGCATC 58.451 45.455 0.00 0.00 0.00 3.91
740 755 1.592543 TGAATCGTCCATTTCGCATCG 59.407 47.619 0.00 0.00 0.00 3.84
741 756 0.937304 AATCGTCCATTTCGCATCGG 59.063 50.000 0.00 0.00 0.00 4.18
742 757 1.498865 ATCGTCCATTTCGCATCGGC 61.499 55.000 0.00 0.00 0.00 5.54
743 758 2.173669 CGTCCATTTCGCATCGGCT 61.174 57.895 0.00 0.00 38.10 5.52
744 759 1.353103 GTCCATTTCGCATCGGCTG 59.647 57.895 0.00 0.00 38.10 4.85
745 760 1.078497 TCCATTTCGCATCGGCTGT 60.078 52.632 0.00 0.00 38.10 4.40
746 761 1.063006 CCATTTCGCATCGGCTGTG 59.937 57.895 0.00 0.00 38.10 3.66
747 762 1.368345 CCATTTCGCATCGGCTGTGA 61.368 55.000 0.00 0.00 42.56 3.58
749 764 3.874873 TTCGCATCGGCTGTGAAG 58.125 55.556 3.89 0.00 46.69 3.02
750 765 1.005037 TTCGCATCGGCTGTGAAGT 60.005 52.632 3.89 0.00 46.69 3.01
751 766 0.245266 TTCGCATCGGCTGTGAAGTA 59.755 50.000 3.89 0.00 46.69 2.24
752 767 0.179137 TCGCATCGGCTGTGAAGTAG 60.179 55.000 0.00 0.00 41.34 2.57
753 768 0.458543 CGCATCGGCTGTGAAGTAGT 60.459 55.000 0.00 0.00 37.57 2.73
754 769 1.726853 GCATCGGCTGTGAAGTAGTT 58.273 50.000 0.00 0.00 36.96 2.24
755 770 2.076863 GCATCGGCTGTGAAGTAGTTT 58.923 47.619 0.00 0.00 36.96 2.66
756 771 2.094417 GCATCGGCTGTGAAGTAGTTTC 59.906 50.000 0.00 0.00 36.96 2.78
757 772 2.060326 TCGGCTGTGAAGTAGTTTCG 57.940 50.000 0.00 0.00 38.71 3.46
758 773 0.438830 CGGCTGTGAAGTAGTTTCGC 59.561 55.000 0.00 0.00 44.72 4.70
759 774 0.796927 GGCTGTGAAGTAGTTTCGCC 59.203 55.000 0.00 0.00 44.03 5.54
760 775 0.438830 GCTGTGAAGTAGTTTCGCCG 59.561 55.000 0.00 0.00 44.03 6.46
761 776 1.933500 GCTGTGAAGTAGTTTCGCCGA 60.934 52.381 0.00 0.00 44.03 5.54
762 777 2.400399 CTGTGAAGTAGTTTCGCCGAA 58.600 47.619 0.00 0.00 44.03 4.30
763 778 2.798283 CTGTGAAGTAGTTTCGCCGAAA 59.202 45.455 8.43 8.43 44.03 3.46
764 779 2.798283 TGTGAAGTAGTTTCGCCGAAAG 59.202 45.455 13.32 0.00 44.03 2.62
765 780 3.054878 GTGAAGTAGTTTCGCCGAAAGA 58.945 45.455 13.32 1.00 39.81 2.52
766 781 3.492011 GTGAAGTAGTTTCGCCGAAAGAA 59.508 43.478 13.32 0.88 39.81 2.52
767 782 4.151867 GTGAAGTAGTTTCGCCGAAAGAAT 59.848 41.667 13.32 4.90 39.81 2.40
768 783 4.753107 TGAAGTAGTTTCGCCGAAAGAATT 59.247 37.500 13.32 9.45 38.71 2.17
769 784 5.927689 TGAAGTAGTTTCGCCGAAAGAATTA 59.072 36.000 13.32 1.17 38.71 1.40
770 785 5.774878 AGTAGTTTCGCCGAAAGAATTAC 57.225 39.130 13.32 12.48 31.87 1.89
771 786 5.232463 AGTAGTTTCGCCGAAAGAATTACA 58.768 37.500 13.32 0.00 31.87 2.41
772 787 4.663636 AGTTTCGCCGAAAGAATTACAG 57.336 40.909 13.32 0.00 31.87 2.74
773 788 4.312443 AGTTTCGCCGAAAGAATTACAGA 58.688 39.130 13.32 0.00 31.87 3.41
777 792 5.464965 TCGCCGAAAGAATTACAGATTTC 57.535 39.130 0.00 0.00 0.00 2.17
783 798 7.595130 GCCGAAAGAATTACAGATTTCTTTTGT 59.405 33.333 17.62 0.00 46.69 2.83
819 834 4.994852 TCCTTGTGGAATTTTGTCTCGTAG 59.005 41.667 0.00 0.00 39.87 3.51
824 839 3.126858 TGGAATTTTGTCTCGTAGCATGC 59.873 43.478 10.51 10.51 0.00 4.06
845 860 3.186409 GCGTATTTGTGCGTGGATCATAT 59.814 43.478 0.00 0.00 0.00 1.78
847 862 5.444613 GCGTATTTGTGCGTGGATCATATAG 60.445 44.000 0.00 0.00 0.00 1.31
848 863 5.861787 CGTATTTGTGCGTGGATCATATAGA 59.138 40.000 0.00 0.00 0.00 1.98
849 864 6.183359 CGTATTTGTGCGTGGATCATATAGAC 60.183 42.308 0.00 0.00 0.00 2.59
892 907 9.109393 GTGTGTTTGTACATATCCATATCAGTT 57.891 33.333 0.00 0.00 36.50 3.16
928 943 2.350522 AGATTTGGTGCGAGCAGTTAG 58.649 47.619 0.00 0.00 0.00 2.34
929 944 0.804989 ATTTGGTGCGAGCAGTTAGC 59.195 50.000 0.00 0.00 46.19 3.09
1014 1033 1.375908 GAAGATGACGGCACCAGCA 60.376 57.895 0.00 0.00 44.61 4.41
1113 1132 0.768221 TGGAGAAGGTGGCCAAGACT 60.768 55.000 7.24 2.91 0.00 3.24
1353 1372 2.347691 AAACCCACCTTGTCCCGTCC 62.348 60.000 0.00 0.00 0.00 4.79
1691 1844 7.827819 ACTTCTCTTGTTTAAAAAGGTTTGC 57.172 32.000 0.00 0.00 0.00 3.68
1883 2045 3.243704 TGCCTGTGCATGTTAGTTTTTCC 60.244 43.478 0.00 0.00 44.23 3.13
1903 2073 3.444034 TCCGAGTCAGTTAGATGTTCTGG 59.556 47.826 0.00 0.00 0.00 3.86
1904 2074 3.444034 CCGAGTCAGTTAGATGTTCTGGA 59.556 47.826 0.00 0.00 0.00 3.86
2064 2286 1.444895 GACCAGCAGCAATTTGGCG 60.445 57.895 0.00 0.00 39.27 5.69
2095 2317 8.503458 TTGATCCAAATCACATTGTTTTTGTT 57.497 26.923 15.55 7.34 41.62 2.83
2096 2318 8.503458 TGATCCAAATCACATTGTTTTTGTTT 57.497 26.923 15.55 7.11 36.98 2.83
2097 2319 8.610896 TGATCCAAATCACATTGTTTTTGTTTC 58.389 29.630 15.55 12.87 36.98 2.78
2098 2320 6.998338 TCCAAATCACATTGTTTTTGTTTCG 58.002 32.000 15.55 5.87 0.00 3.46
2171 2605 9.195411 ACACAGCAATTCATATTAGTTTGTTTG 57.805 29.630 0.00 0.00 0.00 2.93
2367 2824 9.803507 TTAAGTATCTCTCCCTCGTATTATTGA 57.196 33.333 0.00 0.00 0.00 2.57
2376 2833 4.376008 CCCTCGTATTATTGATTGAACGCG 60.376 45.833 3.53 3.53 0.00 6.01
2377 2834 4.376008 CCTCGTATTATTGATTGAACGCGG 60.376 45.833 12.47 0.00 0.00 6.46
2462 2919 6.318900 AGTGCCTTTATATTTGGTGTAGAAGC 59.681 38.462 0.00 0.00 0.00 3.86
2464 2921 5.748592 CCTTTATATTTGGTGTAGAAGCGC 58.251 41.667 0.00 0.00 0.00 5.92
2469 2926 0.321298 TTGGTGTAGAAGCGCCTTCC 60.321 55.000 2.29 0.00 40.98 3.46
2529 2986 0.310854 GAACTTGGCCAACAGTTCGG 59.689 55.000 26.72 14.19 32.04 4.30
2808 3323 1.205893 GACACCCTGAGCGAAGAATCT 59.794 52.381 0.00 0.00 0.00 2.40
2883 3398 3.130516 GGACTTCTGACATCACGGTATCA 59.869 47.826 0.00 0.00 0.00 2.15
2885 3400 5.344743 ACTTCTGACATCACGGTATCATT 57.655 39.130 0.00 0.00 0.00 2.57
2890 3405 5.985530 TCTGACATCACGGTATCATTGATTC 59.014 40.000 4.14 0.00 0.00 2.52
2908 3423 4.155099 TGATTCCGAAAGCGCATCTTTTAA 59.845 37.500 11.47 0.00 44.58 1.52
2924 3439 7.059945 GCATCTTTTAATCTTGTCGTGTTCTTG 59.940 37.037 0.00 0.00 0.00 3.02
2931 3447 3.372822 TCTTGTCGTGTTCTTGAAACCAC 59.627 43.478 0.00 0.00 0.00 4.16
2934 3451 0.666374 CGTGTTCTTGAAACCACCCC 59.334 55.000 0.00 0.00 0.00 4.95
2989 3506 1.568504 TTTATCAGGAGGACACCGCT 58.431 50.000 0.00 0.00 34.73 5.52
3025 3542 1.000955 GAGGCTCCAAAGAACGACTCA 59.999 52.381 2.15 0.00 0.00 3.41
3121 3639 1.662629 CAATGTGCTCTGGATCGTGTC 59.337 52.381 0.00 0.00 0.00 3.67
3122 3640 0.897621 ATGTGCTCTGGATCGTGTCA 59.102 50.000 0.00 0.00 0.00 3.58
3126 3644 2.099921 GTGCTCTGGATCGTGTCATAGT 59.900 50.000 0.00 0.00 0.00 2.12
3196 3715 1.302511 CAGGGAAGGTTGTGGTCGG 60.303 63.158 0.00 0.00 0.00 4.79
3197 3716 1.768888 AGGGAAGGTTGTGGTCGGT 60.769 57.895 0.00 0.00 0.00 4.69
3239 3758 2.530151 TGCCTCCTGGTCTGGCTT 60.530 61.111 21.38 0.00 46.23 4.35
3306 3831 7.551262 TCGTTCTGCCTTAATATTGCTTCTTAA 59.449 33.333 0.00 0.00 0.00 1.85
3307 3832 8.181573 CGTTCTGCCTTAATATTGCTTCTTAAA 58.818 33.333 0.00 0.00 0.00 1.52
3374 3900 1.043673 TTGGTGGTTTTTCGTGGGGG 61.044 55.000 0.00 0.00 0.00 5.40
3375 3901 1.456145 GGTGGTTTTTCGTGGGGGT 60.456 57.895 0.00 0.00 0.00 4.95
3408 3934 2.598394 TGGCTTTGTGGCTGGCTC 60.598 61.111 2.00 0.00 42.34 4.70
3411 3937 0.680921 GGCTTTGTGGCTGGCTCATA 60.681 55.000 6.81 1.88 38.32 2.15
3418 3944 1.151760 TGGCTGGCTCATATGGGAAT 58.848 50.000 6.82 0.00 0.00 3.01
3427 3953 3.056322 GCTCATATGGGAATTGGGATTGC 60.056 47.826 6.82 0.00 33.28 3.56
3447 3973 2.613506 CGGGTTGTTTGCTCCGGAC 61.614 63.158 0.00 0.00 38.93 4.79
3448 3974 1.527380 GGGTTGTTTGCTCCGGACA 60.527 57.895 0.00 0.46 0.00 4.02
3449 3975 1.104577 GGGTTGTTTGCTCCGGACAA 61.105 55.000 0.00 7.77 0.00 3.18
3450 3976 0.310854 GGTTGTTTGCTCCGGACAAG 59.689 55.000 15.76 2.65 34.29 3.16
3451 3977 1.305201 GTTGTTTGCTCCGGACAAGA 58.695 50.000 15.76 7.58 34.29 3.02
3452 3978 1.880027 GTTGTTTGCTCCGGACAAGAT 59.120 47.619 15.76 0.00 34.29 2.40
3453 3979 2.270352 TGTTTGCTCCGGACAAGATT 57.730 45.000 15.76 0.00 0.00 2.40
3454 3980 1.879380 TGTTTGCTCCGGACAAGATTG 59.121 47.619 15.76 0.64 0.00 2.67
3471 3997 2.420628 TTGAAGCGCTGACAAAATGG 57.579 45.000 22.04 0.00 0.00 3.16
3499 4025 2.852495 TTCGATGGACGCAGCCCTTC 62.852 60.000 0.00 0.00 42.26 3.46
3503 4029 3.706373 GGACGCAGCCCTTCCTGA 61.706 66.667 0.00 0.00 34.77 3.86
3516 4042 3.760684 CCCTTCCTGAACCTGAAATTCTG 59.239 47.826 0.00 0.00 0.00 3.02
3533 4059 2.235891 TCTGAAACAGACGTCCTAGCA 58.764 47.619 13.01 3.83 35.39 3.49
3536 4062 2.101750 TGAAACAGACGTCCTAGCACAA 59.898 45.455 13.01 0.00 0.00 3.33
3541 4067 0.889306 GACGTCCTAGCACAACTCCT 59.111 55.000 3.51 0.00 0.00 3.69
3542 4068 1.272769 GACGTCCTAGCACAACTCCTT 59.727 52.381 3.51 0.00 0.00 3.36
3558 4084 3.276307 ACTCCTTCCTCTCCCTAATTCCT 59.724 47.826 0.00 0.00 0.00 3.36
3566 4092 4.140900 CCTCTCCCTAATTCCTGACTCCTA 60.141 50.000 0.00 0.00 0.00 2.94
3567 4093 5.460423 CCTCTCCCTAATTCCTGACTCCTAT 60.460 48.000 0.00 0.00 0.00 2.57
3596 4123 2.284331 TAGCGGTTCCTCTGGCCA 60.284 61.111 4.71 4.71 0.00 5.36
3597 4124 1.689233 TAGCGGTTCCTCTGGCCAT 60.689 57.895 5.51 0.00 0.00 4.40
3598 4125 1.271840 TAGCGGTTCCTCTGGCCATT 61.272 55.000 5.51 0.00 0.00 3.16
3599 4126 1.678970 GCGGTTCCTCTGGCCATTT 60.679 57.895 5.51 0.00 0.00 2.32
3600 4127 0.393808 GCGGTTCCTCTGGCCATTTA 60.394 55.000 5.51 0.00 0.00 1.40
3601 4128 1.379527 CGGTTCCTCTGGCCATTTAC 58.620 55.000 5.51 0.08 0.00 2.01
3602 4129 1.065418 CGGTTCCTCTGGCCATTTACT 60.065 52.381 5.51 0.00 0.00 2.24
3603 4130 2.618045 CGGTTCCTCTGGCCATTTACTT 60.618 50.000 5.51 0.00 0.00 2.24
3604 4131 2.755103 GGTTCCTCTGGCCATTTACTTG 59.245 50.000 5.51 0.00 0.00 3.16
3605 4132 3.421844 GTTCCTCTGGCCATTTACTTGT 58.578 45.455 5.51 0.00 0.00 3.16
3606 4133 4.566907 GGTTCCTCTGGCCATTTACTTGTA 60.567 45.833 5.51 0.00 0.00 2.41
3607 4134 5.193679 GTTCCTCTGGCCATTTACTTGTAT 58.806 41.667 5.51 0.00 0.00 2.29
3608 4135 4.780815 TCCTCTGGCCATTTACTTGTATG 58.219 43.478 5.51 0.00 0.00 2.39
3609 4136 4.227300 TCCTCTGGCCATTTACTTGTATGT 59.773 41.667 5.51 0.00 0.00 2.29
3610 4137 4.949856 CCTCTGGCCATTTACTTGTATGTT 59.050 41.667 5.51 0.00 0.00 2.71
3611 4138 5.418840 CCTCTGGCCATTTACTTGTATGTTT 59.581 40.000 5.51 0.00 0.00 2.83
3612 4139 6.601613 CCTCTGGCCATTTACTTGTATGTTTA 59.398 38.462 5.51 0.00 0.00 2.01
3613 4140 7.385778 TCTGGCCATTTACTTGTATGTTTAC 57.614 36.000 5.51 0.00 0.00 2.01
3614 4141 7.172342 TCTGGCCATTTACTTGTATGTTTACT 58.828 34.615 5.51 0.00 0.00 2.24
3615 4142 7.668052 TCTGGCCATTTACTTGTATGTTTACTT 59.332 33.333 5.51 0.00 0.00 2.24
3616 4143 7.822658 TGGCCATTTACTTGTATGTTTACTTC 58.177 34.615 0.00 0.00 0.00 3.01
3617 4144 7.448777 TGGCCATTTACTTGTATGTTTACTTCA 59.551 33.333 0.00 0.00 0.00 3.02
3618 4145 8.466798 GGCCATTTACTTGTATGTTTACTTCAT 58.533 33.333 0.00 0.00 0.00 2.57
3670 4197 9.986157 ATGGCCATTTATATAAGATCACTTCAT 57.014 29.630 14.09 0.00 37.53 2.57
3707 4234 9.965902 ATAAGATCACTTCAAATCCAAGTTAGT 57.034 29.630 0.00 0.00 37.53 2.24
3708 4235 8.697507 AAGATCACTTCAAATCCAAGTTAGTT 57.302 30.769 0.00 0.00 31.40 2.24
3709 4236 8.103948 AGATCACTTCAAATCCAAGTTAGTTG 57.896 34.615 0.00 0.00 31.40 3.16
3710 4237 7.939039 AGATCACTTCAAATCCAAGTTAGTTGA 59.061 33.333 0.72 0.00 38.60 3.18
3711 4238 7.873719 TCACTTCAAATCCAAGTTAGTTGAA 57.126 32.000 0.72 2.35 38.60 2.69
3712 4239 7.703328 TCACTTCAAATCCAAGTTAGTTGAAC 58.297 34.615 0.72 0.00 38.60 3.18
3713 4240 6.918022 CACTTCAAATCCAAGTTAGTTGAACC 59.082 38.462 0.72 0.00 38.60 3.62
3714 4241 5.682943 TCAAATCCAAGTTAGTTGAACCG 57.317 39.130 0.72 0.00 38.60 4.44
3715 4242 5.369833 TCAAATCCAAGTTAGTTGAACCGA 58.630 37.500 0.72 0.00 38.60 4.69
3716 4243 5.823570 TCAAATCCAAGTTAGTTGAACCGAA 59.176 36.000 0.72 0.00 38.60 4.30
3717 4244 6.488683 TCAAATCCAAGTTAGTTGAACCGAAT 59.511 34.615 0.72 0.00 38.60 3.34
3718 4245 7.662258 TCAAATCCAAGTTAGTTGAACCGAATA 59.338 33.333 0.72 0.00 38.60 1.75
3719 4246 7.989416 AATCCAAGTTAGTTGAACCGAATAA 57.011 32.000 0.72 0.00 38.60 1.40
3720 4247 7.989416 ATCCAAGTTAGTTGAACCGAATAAA 57.011 32.000 0.72 0.00 38.60 1.40
3721 4248 7.193377 TCCAAGTTAGTTGAACCGAATAAAC 57.807 36.000 0.72 0.00 38.60 2.01
3722 4249 6.993902 TCCAAGTTAGTTGAACCGAATAAACT 59.006 34.615 0.72 0.00 38.60 2.66
3723 4250 7.041644 TCCAAGTTAGTTGAACCGAATAAACTG 60.042 37.037 0.72 0.00 38.60 3.16
3724 4251 7.041644 CCAAGTTAGTTGAACCGAATAAACTGA 60.042 37.037 0.72 0.00 38.60 3.41
3725 4252 8.339714 CAAGTTAGTTGAACCGAATAAACTGAA 58.660 33.333 0.00 0.00 38.60 3.02
3726 4253 8.084590 AGTTAGTTGAACCGAATAAACTGAAG 57.915 34.615 0.00 0.00 39.02 3.02
3727 4254 7.713942 AGTTAGTTGAACCGAATAAACTGAAGT 59.286 33.333 0.00 0.00 39.02 3.01
3728 4255 8.981647 GTTAGTTGAACCGAATAAACTGAAGTA 58.018 33.333 0.00 0.00 34.76 2.24
3729 4256 9.545105 TTAGTTGAACCGAATAAACTGAAGTAA 57.455 29.630 0.00 0.00 34.76 2.24
3730 4257 8.441312 AGTTGAACCGAATAAACTGAAGTAAA 57.559 30.769 0.00 0.00 31.82 2.01
3731 4258 8.895737 AGTTGAACCGAATAAACTGAAGTAAAA 58.104 29.630 0.00 0.00 31.82 1.52
3732 4259 9.505995 GTTGAACCGAATAAACTGAAGTAAAAA 57.494 29.630 0.00 0.00 0.00 1.94
3766 4293 8.816640 ATATTTCTTGTGATGAACAACCAAAC 57.183 30.769 0.00 0.00 43.96 2.93
3767 4294 5.651387 TTCTTGTGATGAACAACCAAACA 57.349 34.783 0.00 0.00 43.96 2.83
3768 4295 5.651387 TCTTGTGATGAACAACCAAACAA 57.349 34.783 0.00 0.00 43.96 2.83
3769 4296 5.649557 TCTTGTGATGAACAACCAAACAAG 58.350 37.500 6.35 6.35 43.96 3.16
3770 4297 5.184864 TCTTGTGATGAACAACCAAACAAGT 59.815 36.000 11.20 0.00 43.96 3.16
3771 4298 5.398603 TGTGATGAACAACCAAACAAGTT 57.601 34.783 0.00 0.00 35.24 2.66
3772 4299 5.636965 TTGTGATGAACAACCAAACAAGTTG 59.363 36.000 0.00 0.00 43.96 3.16
3782 4309 7.363205 CAACCAAACAAGTTGTCATTTTTCT 57.637 32.000 9.40 0.00 39.79 2.52
3783 4310 7.805700 CAACCAAACAAGTTGTCATTTTTCTT 58.194 30.769 9.40 0.00 39.79 2.52
3784 4311 7.363205 ACCAAACAAGTTGTCATTTTTCTTG 57.637 32.000 9.40 7.33 40.54 3.02
3785 4312 6.934083 ACCAAACAAGTTGTCATTTTTCTTGT 59.066 30.769 9.40 0.00 46.61 3.16
3786 4313 8.091449 ACCAAACAAGTTGTCATTTTTCTTGTA 58.909 29.630 9.40 0.00 44.81 2.41
3787 4314 8.379902 CCAAACAAGTTGTCATTTTTCTTGTAC 58.620 33.333 9.40 0.00 44.81 2.90
3788 4315 8.920665 CAAACAAGTTGTCATTTTTCTTGTACA 58.079 29.630 9.40 0.00 44.81 2.90
3789 4316 9.651913 AAACAAGTTGTCATTTTTCTTGTACAT 57.348 25.926 9.40 0.00 44.81 2.29
3790 4317 8.633075 ACAAGTTGTCATTTTTCTTGTACATG 57.367 30.769 1.64 0.00 44.11 3.21
3791 4318 8.465999 ACAAGTTGTCATTTTTCTTGTACATGA 58.534 29.630 1.64 7.33 44.11 3.07
3792 4319 8.961092 CAAGTTGTCATTTTTCTTGTACATGAG 58.039 33.333 10.92 0.06 33.27 2.90
3793 4320 8.225603 AGTTGTCATTTTTCTTGTACATGAGT 57.774 30.769 10.92 0.00 0.00 3.41
3794 4321 8.345565 AGTTGTCATTTTTCTTGTACATGAGTC 58.654 33.333 10.92 0.13 0.00 3.36
3795 4322 7.800155 TGTCATTTTTCTTGTACATGAGTCA 57.200 32.000 10.92 0.00 0.00 3.41
3796 4323 8.219546 TGTCATTTTTCTTGTACATGAGTCAA 57.780 30.769 10.92 6.66 0.00 3.18
3797 4324 8.681806 TGTCATTTTTCTTGTACATGAGTCAAA 58.318 29.630 10.92 11.42 0.00 2.69
3798 4325 9.683069 GTCATTTTTCTTGTACATGAGTCAAAT 57.317 29.630 10.92 12.77 0.00 2.32
3802 4329 9.515020 TTTTTCTTGTACATGAGTCAAATTCAC 57.485 29.630 10.92 0.00 0.00 3.18
3803 4330 8.450578 TTTCTTGTACATGAGTCAAATTCACT 57.549 30.769 10.92 0.00 0.00 3.41
3804 4331 9.554395 TTTCTTGTACATGAGTCAAATTCACTA 57.446 29.630 10.92 0.00 0.00 2.74
3805 4332 8.534333 TCTTGTACATGAGTCAAATTCACTAC 57.466 34.615 7.33 0.00 0.00 2.73
3806 4333 8.367911 TCTTGTACATGAGTCAAATTCACTACT 58.632 33.333 7.33 0.00 0.00 2.57
3807 4334 9.639601 CTTGTACATGAGTCAAATTCACTACTA 57.360 33.333 0.00 0.00 0.00 1.82
3808 4335 9.990360 TTGTACATGAGTCAAATTCACTACTAA 57.010 29.630 0.00 0.00 0.00 2.24
3809 4336 9.639601 TGTACATGAGTCAAATTCACTACTAAG 57.360 33.333 0.00 0.00 0.00 2.18
3810 4337 7.602517 ACATGAGTCAAATTCACTACTAAGC 57.397 36.000 0.00 0.00 0.00 3.09
3811 4338 7.161404 ACATGAGTCAAATTCACTACTAAGCA 58.839 34.615 0.00 0.00 0.00 3.91
3812 4339 7.118390 ACATGAGTCAAATTCACTACTAAGCAC 59.882 37.037 0.00 0.00 0.00 4.40
3813 4340 6.521162 TGAGTCAAATTCACTACTAAGCACA 58.479 36.000 0.00 0.00 0.00 4.57
3814 4341 7.161404 TGAGTCAAATTCACTACTAAGCACAT 58.839 34.615 0.00 0.00 0.00 3.21
3815 4342 8.311109 TGAGTCAAATTCACTACTAAGCACATA 58.689 33.333 0.00 0.00 0.00 2.29
3816 4343 9.151471 GAGTCAAATTCACTACTAAGCACATAA 57.849 33.333 0.00 0.00 0.00 1.90
3817 4344 9.502091 AGTCAAATTCACTACTAAGCACATAAA 57.498 29.630 0.00 0.00 0.00 1.40
3868 4395 9.974980 TCTCTTTTTAAAATGGTAAACACATCC 57.025 29.630 12.42 0.00 0.00 3.51
3869 4396 9.757227 CTCTTTTTAAAATGGTAAACACATCCA 57.243 29.630 12.42 0.00 35.64 3.41
3874 4401 8.664211 TTAAAATGGTAAACACATCCAAAACC 57.336 30.769 0.00 0.00 34.80 3.27
3875 4402 5.878406 AATGGTAAACACATCCAAAACCA 57.122 34.783 0.00 0.00 39.66 3.67
3876 4403 6.432403 AATGGTAAACACATCCAAAACCAT 57.568 33.333 0.00 0.00 45.67 3.55
3877 4404 5.461032 TGGTAAACACATCCAAAACCATC 57.539 39.130 0.00 0.00 30.84 3.51
3878 4405 4.895889 TGGTAAACACATCCAAAACCATCA 59.104 37.500 0.00 0.00 30.84 3.07
3879 4406 5.363868 TGGTAAACACATCCAAAACCATCAA 59.636 36.000 0.00 0.00 30.84 2.57
3880 4407 6.042552 TGGTAAACACATCCAAAACCATCAAT 59.957 34.615 0.00 0.00 30.84 2.57
3881 4408 7.233553 TGGTAAACACATCCAAAACCATCAATA 59.766 33.333 0.00 0.00 30.84 1.90
3882 4409 7.759433 GGTAAACACATCCAAAACCATCAATAG 59.241 37.037 0.00 0.00 0.00 1.73
3883 4410 7.537596 AAACACATCCAAAACCATCAATAGA 57.462 32.000 0.00 0.00 0.00 1.98
3884 4411 7.722949 AACACATCCAAAACCATCAATAGAT 57.277 32.000 0.00 0.00 33.87 1.98
3899 4426 6.642707 TCAATAGATGAATCAATGCATGCA 57.357 33.333 25.04 25.04 34.30 3.96
3900 4427 7.227049 TCAATAGATGAATCAATGCATGCAT 57.773 32.000 27.46 27.46 34.83 3.96
3901 4428 8.343168 TCAATAGATGAATCAATGCATGCATA 57.657 30.769 32.36 19.13 33.20 3.14
3902 4429 8.966868 TCAATAGATGAATCAATGCATGCATAT 58.033 29.630 32.36 20.78 33.20 1.78
3905 4432 7.696992 AGATGAATCAATGCATGCATATACA 57.303 32.000 32.36 24.67 35.31 2.29
3906 4433 7.535997 AGATGAATCAATGCATGCATATACAC 58.464 34.615 32.36 22.19 35.31 2.90
3907 4434 6.887626 TGAATCAATGCATGCATATACACT 57.112 33.333 32.36 13.94 35.31 3.55
3908 4435 7.279750 TGAATCAATGCATGCATATACACTT 57.720 32.000 32.36 18.88 35.31 3.16
3909 4436 7.142680 TGAATCAATGCATGCATATACACTTG 58.857 34.615 32.36 24.12 35.31 3.16
3910 4437 6.644248 ATCAATGCATGCATATACACTTGT 57.356 33.333 32.36 11.64 35.31 3.16
3911 4438 7.748691 ATCAATGCATGCATATACACTTGTA 57.251 32.000 32.36 15.38 35.31 2.41
3912 4439 7.748691 TCAATGCATGCATATACACTTGTAT 57.251 32.000 32.36 10.34 43.15 2.29
3913 4440 8.845413 TCAATGCATGCATATACACTTGTATA 57.155 30.769 32.36 10.76 44.66 1.47
3942 4469 9.862371 TTGTGTAAAATTGTATGTGTTTTGAGT 57.138 25.926 0.00 0.00 0.00 3.41
3943 4470 9.509855 TGTGTAAAATTGTATGTGTTTTGAGTC 57.490 29.630 0.00 0.00 0.00 3.36
3944 4471 9.509855 GTGTAAAATTGTATGTGTTTTGAGTCA 57.490 29.630 0.00 0.00 0.00 3.41
3972 4499 7.630470 ATTTGTAAATTCAAATTCGCGTCAA 57.370 28.000 5.77 0.00 42.88 3.18
3973 4500 6.427300 TTGTAAATTCAAATTCGCGTCAAC 57.573 33.333 5.77 0.00 0.00 3.18
3974 4501 5.753744 TGTAAATTCAAATTCGCGTCAACT 58.246 33.333 5.77 0.00 0.00 3.16
3975 4502 6.202937 TGTAAATTCAAATTCGCGTCAACTT 58.797 32.000 5.77 0.00 0.00 2.66
3976 4503 6.693545 TGTAAATTCAAATTCGCGTCAACTTT 59.306 30.769 5.77 0.00 0.00 2.66
3977 4504 5.559694 AATTCAAATTCGCGTCAACTTTG 57.440 34.783 5.77 10.10 0.00 2.77
3978 4505 2.993545 TCAAATTCGCGTCAACTTTGG 58.006 42.857 5.77 0.00 0.00 3.28
3979 4506 2.356382 TCAAATTCGCGTCAACTTTGGT 59.644 40.909 5.77 0.00 0.00 3.67
3980 4507 3.112580 CAAATTCGCGTCAACTTTGGTT 58.887 40.909 5.77 0.00 35.86 3.67
3981 4508 3.430333 AATTCGCGTCAACTTTGGTTT 57.570 38.095 5.77 0.00 32.73 3.27
3982 4509 2.923605 TTCGCGTCAACTTTGGTTTT 57.076 40.000 5.77 0.00 32.73 2.43
3983 4510 2.923605 TCGCGTCAACTTTGGTTTTT 57.076 40.000 5.77 0.00 32.73 1.94
3984 4511 4.352600 TTCGCGTCAACTTTGGTTTTTA 57.647 36.364 5.77 0.00 32.73 1.52
3985 4512 4.555348 TCGCGTCAACTTTGGTTTTTAT 57.445 36.364 5.77 0.00 32.73 1.40
3986 4513 4.283678 TCGCGTCAACTTTGGTTTTTATG 58.716 39.130 5.77 0.00 32.73 1.90
3987 4514 3.423867 CGCGTCAACTTTGGTTTTTATGG 59.576 43.478 0.00 0.00 32.73 2.74
3988 4515 4.364860 GCGTCAACTTTGGTTTTTATGGT 58.635 39.130 0.00 0.00 32.73 3.55
3989 4516 5.521544 GCGTCAACTTTGGTTTTTATGGTA 58.478 37.500 0.00 0.00 32.73 3.25
3990 4517 6.153756 GCGTCAACTTTGGTTTTTATGGTAT 58.846 36.000 0.00 0.00 32.73 2.73
3991 4518 7.306953 GCGTCAACTTTGGTTTTTATGGTATA 58.693 34.615 0.00 0.00 32.73 1.47
3992 4519 7.271868 GCGTCAACTTTGGTTTTTATGGTATAC 59.728 37.037 0.00 0.00 32.73 1.47
3993 4520 8.291032 CGTCAACTTTGGTTTTTATGGTATACA 58.709 33.333 5.01 0.00 32.73 2.29
3994 4521 9.401873 GTCAACTTTGGTTTTTATGGTATACAC 57.598 33.333 5.01 0.00 32.73 2.90
3995 4522 8.578151 TCAACTTTGGTTTTTATGGTATACACC 58.422 33.333 5.01 2.41 38.28 4.16
3996 4523 7.539366 CAACTTTGGTTTTTATGGTATACACCG 59.461 37.037 5.01 0.00 39.65 4.94
3997 4524 7.447853 AACTTTGGTTTTTATGGTATACACCGA 59.552 33.333 5.01 0.00 39.04 4.69
4007 4534 3.300009 GGTATACACCGAAACCGTATCG 58.700 50.000 5.01 0.00 39.92 2.92
4008 4535 3.003275 GGTATACACCGAAACCGTATCGA 59.997 47.826 5.01 0.00 42.76 3.59
4009 4536 3.781079 ATACACCGAAACCGTATCGAA 57.219 42.857 0.00 0.00 42.76 3.71
4010 4537 2.437200 ACACCGAAACCGTATCGAAA 57.563 45.000 0.00 0.00 42.76 3.46
4011 4538 2.963432 ACACCGAAACCGTATCGAAAT 58.037 42.857 0.00 0.00 42.76 2.17
4012 4539 4.108699 ACACCGAAACCGTATCGAAATA 57.891 40.909 0.00 0.00 42.76 1.40
4013 4540 4.493547 ACACCGAAACCGTATCGAAATAA 58.506 39.130 0.00 0.00 42.76 1.40
4014 4541 5.111293 ACACCGAAACCGTATCGAAATAAT 58.889 37.500 0.00 0.00 42.76 1.28
4015 4542 5.581874 ACACCGAAACCGTATCGAAATAATT 59.418 36.000 0.00 0.00 42.76 1.40
4016 4543 6.092533 ACACCGAAACCGTATCGAAATAATTT 59.907 34.615 0.00 0.00 42.76 1.82
4017 4544 6.409761 CACCGAAACCGTATCGAAATAATTTG 59.590 38.462 0.00 0.00 42.76 2.32
4018 4545 5.905181 CCGAAACCGTATCGAAATAATTTGG 59.095 40.000 0.00 0.00 42.76 3.28
4019 4546 6.457257 CCGAAACCGTATCGAAATAATTTGGT 60.457 38.462 0.00 0.00 42.76 3.67
4020 4547 7.254387 CCGAAACCGTATCGAAATAATTTGGTA 60.254 37.037 0.00 0.00 42.76 3.25
4021 4548 8.277713 CGAAACCGTATCGAAATAATTTGGTAT 58.722 33.333 0.00 0.00 42.76 2.73
4039 4566 4.936891 GGTATATACCGAAACCGAACTGT 58.063 43.478 16.11 0.00 36.50 3.55
4040 4567 6.072112 GGTATATACCGAAACCGAACTGTA 57.928 41.667 16.11 0.00 36.50 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
126 137 1.428869 ATCGGAGGAGAATTGAGGGG 58.571 55.000 0.00 0.00 0.00 4.79
192 203 0.545309 TCAGGGTGACAGAAGGGGAG 60.545 60.000 0.00 0.00 0.00 4.30
199 210 1.893062 CGCAGATCAGGGTGACAGA 59.107 57.895 0.00 0.00 0.00 3.41
205 216 1.078848 GAACAGCGCAGATCAGGGT 60.079 57.895 11.47 0.00 0.00 4.34
218 229 2.350772 GCAACAAATCCCGTCAGAACAG 60.351 50.000 0.00 0.00 0.00 3.16
259 271 5.418310 ACAATTCTGTACGAAACAACAGG 57.582 39.130 2.91 0.00 42.72 4.00
283 295 0.458889 TACCATTCACTACGCACGGC 60.459 55.000 0.00 0.00 0.00 5.68
317 329 1.135139 CCAGTCACGGGTAGATCACAG 59.865 57.143 0.00 0.00 0.00 3.66
331 343 3.620488 GCAAATCCTATCAACCCAGTCA 58.380 45.455 0.00 0.00 0.00 3.41
338 350 1.268032 CGTGCGGCAAATCCTATCAAC 60.268 52.381 3.23 0.00 0.00 3.18
368 380 0.607489 CACCAAACCCAGGCTCTGAG 60.607 60.000 0.00 0.00 32.44 3.35
372 384 1.271926 ACATACACCAAACCCAGGCTC 60.272 52.381 0.00 0.00 0.00 4.70
425 437 3.851976 AATATATCGACACGAGAGGGC 57.148 47.619 0.00 0.00 39.91 5.19
471 486 4.398044 CGAAATACAACCCCTGCAATACTT 59.602 41.667 0.00 0.00 0.00 2.24
513 528 5.083821 ACAAGGCCAATTTTGTATACCACT 58.916 37.500 5.01 0.00 35.86 4.00
560 575 9.883142 ACAGAAAACAGGTTTGATTTTGAATTA 57.117 25.926 0.00 0.00 30.49 1.40
584 599 4.717778 TCTTTCGGATAGACCCCAAATACA 59.282 41.667 0.00 0.00 34.64 2.29
601 616 4.295870 TGTGTAGCACTACTGTTCTTTCG 58.704 43.478 9.12 0.00 37.00 3.46
609 624 3.181774 GTGTCGTTTGTGTAGCACTACTG 59.818 47.826 9.12 0.00 37.00 2.74
610 625 3.378339 GTGTCGTTTGTGTAGCACTACT 58.622 45.455 9.12 0.00 37.00 2.57
611 626 2.473984 GGTGTCGTTTGTGTAGCACTAC 59.526 50.000 0.70 0.70 35.11 2.73
612 627 2.546373 GGGTGTCGTTTGTGTAGCACTA 60.546 50.000 0.90 0.00 35.11 2.74
616 631 1.196808 CATGGGTGTCGTTTGTGTAGC 59.803 52.381 0.00 0.00 0.00 3.58
617 632 1.196808 GCATGGGTGTCGTTTGTGTAG 59.803 52.381 0.00 0.00 0.00 2.74
619 634 0.749818 TGCATGGGTGTCGTTTGTGT 60.750 50.000 0.00 0.00 0.00 3.72
620 635 0.317770 GTGCATGGGTGTCGTTTGTG 60.318 55.000 0.00 0.00 0.00 3.33
621 636 1.781025 CGTGCATGGGTGTCGTTTGT 61.781 55.000 0.00 0.00 0.00 2.83
622 637 1.082169 CGTGCATGGGTGTCGTTTG 60.082 57.895 0.00 0.00 0.00 2.93
623 638 1.227704 TCGTGCATGGGTGTCGTTT 60.228 52.632 5.98 0.00 0.00 3.60
624 639 1.959226 GTCGTGCATGGGTGTCGTT 60.959 57.895 5.98 0.00 0.00 3.85
625 640 2.357034 GTCGTGCATGGGTGTCGT 60.357 61.111 5.98 0.00 0.00 4.34
626 641 2.048222 AGTCGTGCATGGGTGTCG 60.048 61.111 5.98 0.00 0.00 4.35
627 642 3.566261 CAGTCGTGCATGGGTGTC 58.434 61.111 5.98 0.00 0.00 3.67
637 652 1.010935 AGAATCGTGCAGCAGTCGTG 61.011 55.000 0.00 0.00 0.00 4.35
638 653 0.526211 TAGAATCGTGCAGCAGTCGT 59.474 50.000 0.00 0.00 0.00 4.34
639 654 0.917259 GTAGAATCGTGCAGCAGTCG 59.083 55.000 0.00 0.00 0.00 4.18
640 655 1.656095 GTGTAGAATCGTGCAGCAGTC 59.344 52.381 0.00 0.00 0.00 3.51
641 656 1.000843 TGTGTAGAATCGTGCAGCAGT 59.999 47.619 0.00 0.00 0.00 4.40
642 657 1.713597 TGTGTAGAATCGTGCAGCAG 58.286 50.000 0.00 0.00 0.00 4.24
643 658 2.270923 GATGTGTAGAATCGTGCAGCA 58.729 47.619 0.00 0.00 0.00 4.41
644 659 1.594862 GGATGTGTAGAATCGTGCAGC 59.405 52.381 0.00 0.00 0.00 5.25
645 660 2.862536 CTGGATGTGTAGAATCGTGCAG 59.137 50.000 0.00 0.00 34.05 4.41
646 661 2.892374 CTGGATGTGTAGAATCGTGCA 58.108 47.619 0.00 0.00 0.00 4.57
647 662 1.594862 GCTGGATGTGTAGAATCGTGC 59.405 52.381 0.00 0.00 0.00 5.34
648 663 2.205074 GGCTGGATGTGTAGAATCGTG 58.795 52.381 0.00 0.00 0.00 4.35
649 664 1.831106 TGGCTGGATGTGTAGAATCGT 59.169 47.619 0.00 0.00 0.00 3.73
650 665 2.602257 TGGCTGGATGTGTAGAATCG 57.398 50.000 0.00 0.00 0.00 3.34
651 666 4.077300 TGATGGCTGGATGTGTAGAATC 57.923 45.455 0.00 0.00 0.00 2.52
652 667 4.508551 TTGATGGCTGGATGTGTAGAAT 57.491 40.909 0.00 0.00 0.00 2.40
653 668 3.998913 TTGATGGCTGGATGTGTAGAA 57.001 42.857 0.00 0.00 0.00 2.10
654 669 3.998913 TTTGATGGCTGGATGTGTAGA 57.001 42.857 0.00 0.00 0.00 2.59
655 670 6.889301 ATATTTTGATGGCTGGATGTGTAG 57.111 37.500 0.00 0.00 0.00 2.74
656 671 6.832900 TCAATATTTTGATGGCTGGATGTGTA 59.167 34.615 0.00 0.00 36.94 2.90
657 672 5.657745 TCAATATTTTGATGGCTGGATGTGT 59.342 36.000 0.00 0.00 36.94 3.72
658 673 6.151663 TCAATATTTTGATGGCTGGATGTG 57.848 37.500 0.00 0.00 36.94 3.21
659 674 6.795144 TTCAATATTTTGATGGCTGGATGT 57.205 33.333 0.00 0.00 41.38 3.06
660 675 7.438564 TCATTCAATATTTTGATGGCTGGATG 58.561 34.615 0.00 0.03 41.38 3.51
661 676 7.606135 TCATTCAATATTTTGATGGCTGGAT 57.394 32.000 0.00 0.00 41.38 3.41
662 677 7.124599 ACTTCATTCAATATTTTGATGGCTGGA 59.875 33.333 0.00 0.00 41.38 3.86
663 678 7.270047 ACTTCATTCAATATTTTGATGGCTGG 58.730 34.615 0.00 0.00 41.38 4.85
664 679 7.437267 GGACTTCATTCAATATTTTGATGGCTG 59.563 37.037 0.00 0.00 41.38 4.85
665 680 7.124599 TGGACTTCATTCAATATTTTGATGGCT 59.875 33.333 0.00 0.00 41.38 4.75
666 681 7.267128 TGGACTTCATTCAATATTTTGATGGC 58.733 34.615 0.00 0.00 41.38 4.40
667 682 7.437267 GCTGGACTTCATTCAATATTTTGATGG 59.563 37.037 0.00 0.00 41.38 3.51
668 683 7.977293 TGCTGGACTTCATTCAATATTTTGATG 59.023 33.333 0.00 1.88 41.38 3.07
669 684 7.977853 GTGCTGGACTTCATTCAATATTTTGAT 59.022 33.333 0.00 0.00 41.38 2.57
670 685 7.315142 GTGCTGGACTTCATTCAATATTTTGA 58.685 34.615 0.00 0.00 40.09 2.69
671 686 6.252015 CGTGCTGGACTTCATTCAATATTTTG 59.748 38.462 0.00 0.00 0.00 2.44
672 687 6.324819 CGTGCTGGACTTCATTCAATATTTT 58.675 36.000 0.00 0.00 0.00 1.82
673 688 5.163622 CCGTGCTGGACTTCATTCAATATTT 60.164 40.000 0.00 0.00 42.00 1.40
674 689 4.336433 CCGTGCTGGACTTCATTCAATATT 59.664 41.667 0.00 0.00 42.00 1.28
675 690 3.879295 CCGTGCTGGACTTCATTCAATAT 59.121 43.478 0.00 0.00 42.00 1.28
676 691 3.270027 CCGTGCTGGACTTCATTCAATA 58.730 45.455 0.00 0.00 42.00 1.90
677 692 2.086869 CCGTGCTGGACTTCATTCAAT 58.913 47.619 0.00 0.00 42.00 2.57
678 693 1.522668 CCGTGCTGGACTTCATTCAA 58.477 50.000 0.00 0.00 42.00 2.69
679 694 0.955428 GCCGTGCTGGACTTCATTCA 60.955 55.000 0.00 0.00 42.00 2.57
680 695 1.648467 GGCCGTGCTGGACTTCATTC 61.648 60.000 0.00 0.00 45.46 2.67
681 696 1.675641 GGCCGTGCTGGACTTCATT 60.676 57.895 0.00 0.00 45.46 2.57
682 697 2.045926 GGCCGTGCTGGACTTCAT 60.046 61.111 0.00 0.00 45.46 2.57
688 703 1.001020 ATCAAATGGCCGTGCTGGA 60.001 52.632 0.00 0.00 42.00 3.86
689 704 1.314534 TGATCAAATGGCCGTGCTGG 61.315 55.000 0.00 0.00 42.50 4.85
690 705 0.742505 ATGATCAAATGGCCGTGCTG 59.257 50.000 0.00 0.00 0.00 4.41
691 706 1.027357 GATGATCAAATGGCCGTGCT 58.973 50.000 0.00 0.00 0.00 4.40
692 707 0.740149 TGATGATCAAATGGCCGTGC 59.260 50.000 0.00 0.00 0.00 5.34
693 708 3.635331 GATTGATGATCAAATGGCCGTG 58.365 45.455 12.36 0.00 40.12 4.94
694 709 2.291465 CGATTGATGATCAAATGGCCGT 59.709 45.455 12.36 0.00 40.12 5.68
695 710 2.291465 ACGATTGATGATCAAATGGCCG 59.709 45.455 12.36 12.25 40.12 6.13
696 711 3.304928 GGACGATTGATGATCAAATGGCC 60.305 47.826 16.09 16.09 40.12 5.36
697 712 3.316029 TGGACGATTGATGATCAAATGGC 59.684 43.478 12.36 9.40 40.12 4.40
698 713 5.239963 TCATGGACGATTGATGATCAAATGG 59.760 40.000 12.36 6.91 40.12 3.16
699 714 6.308371 TCATGGACGATTGATGATCAAATG 57.692 37.500 12.36 9.95 40.12 2.32
700 715 6.947644 TTCATGGACGATTGATGATCAAAT 57.052 33.333 12.36 0.85 40.12 2.32
701 716 6.293027 CGATTCATGGACGATTGATGATCAAA 60.293 38.462 12.36 0.00 40.12 2.69
702 717 5.178067 CGATTCATGGACGATTGATGATCAA 59.822 40.000 10.65 10.65 41.09 2.57
703 718 4.687483 CGATTCATGGACGATTGATGATCA 59.313 41.667 0.00 0.00 34.23 2.92
704 719 4.687948 ACGATTCATGGACGATTGATGATC 59.312 41.667 12.26 0.00 0.00 2.92
705 720 4.635223 ACGATTCATGGACGATTGATGAT 58.365 39.130 12.26 0.00 0.00 2.45
706 721 4.051237 GACGATTCATGGACGATTGATGA 58.949 43.478 12.26 0.00 0.00 2.92
707 722 3.185188 GGACGATTCATGGACGATTGATG 59.815 47.826 12.26 0.00 0.00 3.07
708 723 3.181466 TGGACGATTCATGGACGATTGAT 60.181 43.478 12.26 0.00 0.00 2.57
709 724 2.167487 TGGACGATTCATGGACGATTGA 59.833 45.455 12.26 0.00 0.00 2.57
710 725 2.549926 TGGACGATTCATGGACGATTG 58.450 47.619 12.26 1.22 0.00 2.67
711 726 2.979814 TGGACGATTCATGGACGATT 57.020 45.000 12.26 0.00 0.00 3.34
712 727 3.475566 AATGGACGATTCATGGACGAT 57.524 42.857 12.26 0.00 0.00 3.73
713 728 2.979814 AATGGACGATTCATGGACGA 57.020 45.000 12.26 0.00 0.00 4.20
714 729 2.033747 CGAAATGGACGATTCATGGACG 60.034 50.000 0.00 0.00 0.00 4.79
715 730 2.286418 GCGAAATGGACGATTCATGGAC 60.286 50.000 0.00 0.00 0.00 4.02
716 731 1.939934 GCGAAATGGACGATTCATGGA 59.060 47.619 0.00 0.00 0.00 3.41
717 732 1.670295 TGCGAAATGGACGATTCATGG 59.330 47.619 0.00 0.00 0.00 3.66
718 733 3.548587 GATGCGAAATGGACGATTCATG 58.451 45.455 0.00 0.00 0.00 3.07
719 734 2.221749 CGATGCGAAATGGACGATTCAT 59.778 45.455 0.00 0.00 0.00 2.57
720 735 1.592543 CGATGCGAAATGGACGATTCA 59.407 47.619 0.00 0.00 0.00 2.57
721 736 1.070577 CCGATGCGAAATGGACGATTC 60.071 52.381 0.00 0.00 0.00 2.52
722 737 0.937304 CCGATGCGAAATGGACGATT 59.063 50.000 0.00 0.00 0.00 3.34
723 738 1.498865 GCCGATGCGAAATGGACGAT 61.499 55.000 0.00 0.00 0.00 3.73
724 739 2.171079 GCCGATGCGAAATGGACGA 61.171 57.895 0.00 0.00 0.00 4.20
725 740 2.173669 AGCCGATGCGAAATGGACG 61.174 57.895 0.00 0.00 44.33 4.79
726 741 1.353103 CAGCCGATGCGAAATGGAC 59.647 57.895 0.00 0.00 44.33 4.02
727 742 1.078497 ACAGCCGATGCGAAATGGA 60.078 52.632 0.00 0.00 44.33 3.41
728 743 1.063006 CACAGCCGATGCGAAATGG 59.937 57.895 0.00 0.00 44.33 3.16
729 744 0.447406 TTCACAGCCGATGCGAAATG 59.553 50.000 0.00 0.00 44.33 2.32
730 745 0.729116 CTTCACAGCCGATGCGAAAT 59.271 50.000 0.00 0.00 44.33 2.17
731 746 0.602638 ACTTCACAGCCGATGCGAAA 60.603 50.000 0.00 0.00 44.33 3.46
732 747 0.245266 TACTTCACAGCCGATGCGAA 59.755 50.000 0.00 0.00 44.33 4.70
733 748 0.179137 CTACTTCACAGCCGATGCGA 60.179 55.000 0.00 0.00 44.33 5.10
734 749 0.458543 ACTACTTCACAGCCGATGCG 60.459 55.000 0.00 0.00 44.33 4.73
735 750 1.726853 AACTACTTCACAGCCGATGC 58.273 50.000 0.00 0.00 37.95 3.91
736 751 2.345641 CGAAACTACTTCACAGCCGATG 59.654 50.000 0.00 0.00 33.17 3.84
737 752 2.607187 CGAAACTACTTCACAGCCGAT 58.393 47.619 0.00 0.00 33.17 4.18
738 753 1.933500 GCGAAACTACTTCACAGCCGA 60.934 52.381 0.00 0.00 33.17 5.54
739 754 0.438830 GCGAAACTACTTCACAGCCG 59.561 55.000 0.00 0.00 33.17 5.52
740 755 0.796927 GGCGAAACTACTTCACAGCC 59.203 55.000 0.00 0.00 32.90 4.85
741 756 0.438830 CGGCGAAACTACTTCACAGC 59.561 55.000 0.00 0.00 33.17 4.40
742 757 2.060326 TCGGCGAAACTACTTCACAG 57.940 50.000 7.35 0.00 33.17 3.66
743 758 2.512485 TTCGGCGAAACTACTTCACA 57.488 45.000 21.53 0.00 33.17 3.58
744 759 3.054878 TCTTTCGGCGAAACTACTTCAC 58.945 45.455 29.31 0.00 33.17 3.18
745 760 3.374220 TCTTTCGGCGAAACTACTTCA 57.626 42.857 29.31 8.54 33.17 3.02
746 761 4.923264 ATTCTTTCGGCGAAACTACTTC 57.077 40.909 29.31 0.00 0.00 3.01
747 762 5.697633 TGTAATTCTTTCGGCGAAACTACTT 59.302 36.000 29.31 20.76 0.00 2.24
748 763 5.232463 TGTAATTCTTTCGGCGAAACTACT 58.768 37.500 29.31 16.76 0.00 2.57
749 764 5.346822 TCTGTAATTCTTTCGGCGAAACTAC 59.653 40.000 29.31 23.96 0.00 2.73
750 765 5.472148 TCTGTAATTCTTTCGGCGAAACTA 58.528 37.500 29.31 19.93 0.00 2.24
751 766 4.312443 TCTGTAATTCTTTCGGCGAAACT 58.688 39.130 29.31 16.44 0.00 2.66
752 767 4.657075 TCTGTAATTCTTTCGGCGAAAC 57.343 40.909 29.31 19.91 0.00 2.78
753 768 5.873179 AATCTGTAATTCTTTCGGCGAAA 57.127 34.783 30.52 30.52 0.00 3.46
754 769 5.642063 AGAAATCTGTAATTCTTTCGGCGAA 59.358 36.000 19.83 19.83 32.05 4.70
755 770 5.175859 AGAAATCTGTAATTCTTTCGGCGA 58.824 37.500 4.99 4.99 32.05 5.54
756 771 5.470845 AGAAATCTGTAATTCTTTCGGCG 57.529 39.130 0.00 0.00 32.05 6.46
767 782 9.677567 GCACTATGAAACAAAAGAAATCTGTAA 57.322 29.630 0.00 0.00 0.00 2.41
768 783 9.066892 AGCACTATGAAACAAAAGAAATCTGTA 57.933 29.630 0.00 0.00 0.00 2.74
769 784 7.945134 AGCACTATGAAACAAAAGAAATCTGT 58.055 30.769 0.00 0.00 0.00 3.41
770 785 8.807667 AAGCACTATGAAACAAAAGAAATCTG 57.192 30.769 0.00 0.00 0.00 2.90
771 786 9.468532 GAAAGCACTATGAAACAAAAGAAATCT 57.531 29.630 0.00 0.00 0.00 2.40
772 787 8.703336 GGAAAGCACTATGAAACAAAAGAAATC 58.297 33.333 0.00 0.00 0.00 2.17
773 788 8.424133 AGGAAAGCACTATGAAACAAAAGAAAT 58.576 29.630 0.00 0.00 0.00 2.17
777 792 6.980397 ACAAGGAAAGCACTATGAAACAAAAG 59.020 34.615 0.00 0.00 0.00 2.27
783 798 4.724399 TCCACAAGGAAAGCACTATGAAA 58.276 39.130 0.00 0.00 42.23 2.69
819 834 1.133363 CCACGCACAAATACGCATGC 61.133 55.000 7.91 7.91 34.66 4.06
824 839 4.990543 ATATGATCCACGCACAAATACG 57.009 40.909 0.00 0.00 0.00 3.06
908 923 2.350522 CTAACTGCTCGCACCAAATCT 58.649 47.619 0.00 0.00 0.00 2.40
928 943 5.640732 TCAAAGAGAAAAACAACAGTCAGC 58.359 37.500 0.00 0.00 0.00 4.26
929 944 6.914757 GGATCAAAGAGAAAAACAACAGTCAG 59.085 38.462 0.00 0.00 0.00 3.51
930 945 6.603201 AGGATCAAAGAGAAAAACAACAGTCA 59.397 34.615 0.00 0.00 0.00 3.41
931 946 6.914757 CAGGATCAAAGAGAAAAACAACAGTC 59.085 38.462 0.00 0.00 0.00 3.51
980 999 5.848036 GTCATCTTCACAGTTCACGATTTTG 59.152 40.000 0.00 0.00 0.00 2.44
981 1000 5.333339 CGTCATCTTCACAGTTCACGATTTT 60.333 40.000 0.00 0.00 0.00 1.82
1014 1033 0.251832 TCTCCTCACGGGAAAGCTCT 60.252 55.000 0.00 0.00 44.58 4.09
1113 1132 1.745864 GAGCTCCTCGGAGTCGACA 60.746 63.158 19.50 0.00 43.70 4.35
1353 1372 2.664081 GGACTCAGGGGCAGTGGAG 61.664 68.421 0.00 0.00 0.00 3.86
1883 2045 4.703645 TCCAGAACATCTAACTGACTCG 57.296 45.455 0.00 0.00 34.07 4.18
1903 2073 2.736721 TCTAGCACGTCACAAGCAAATC 59.263 45.455 0.00 0.00 0.00 2.17
1904 2074 2.766313 TCTAGCACGTCACAAGCAAAT 58.234 42.857 0.00 0.00 0.00 2.32
2095 2317 8.671384 AACTGGCTGCTAAAATATATAACGAA 57.329 30.769 0.00 0.00 0.00 3.85
2096 2318 8.671384 AAACTGGCTGCTAAAATATATAACGA 57.329 30.769 0.00 0.00 0.00 3.85
2097 2319 9.730420 AAAAACTGGCTGCTAAAATATATAACG 57.270 29.630 0.00 0.00 0.00 3.18
2113 2546 2.694628 TGATCACAAGCAAAAACTGGCT 59.305 40.909 0.00 0.00 43.46 4.75
2171 2605 6.385649 TTGGTTCTAAAGTCAAATGACCAC 57.614 37.500 9.84 0.00 45.85 4.16
2367 2824 0.741915 AACAAACACCCGCGTTCAAT 59.258 45.000 4.92 0.00 0.00 2.57
2376 2833 3.473625 ACAGCTAGTACAACAAACACCC 58.526 45.455 0.00 0.00 0.00 4.61
2377 2834 4.334481 ACAACAGCTAGTACAACAAACACC 59.666 41.667 0.00 0.00 0.00 4.16
2462 2919 3.475566 TCCATTATTCTCTGGAAGGCG 57.524 47.619 0.00 0.00 38.59 5.52
2628 3086 9.981460 AAAATGGGCCATAAAAATAAATAACCA 57.019 25.926 21.54 0.00 0.00 3.67
2640 3098 4.594920 TGAAAGTCCAAAATGGGCCATAAA 59.405 37.500 21.54 0.59 45.08 1.40
2643 3101 2.618794 TGAAAGTCCAAAATGGGCCAT 58.381 42.857 14.78 14.78 45.08 4.40
2697 3155 9.539194 AAAGAATGTCTAAAGGAAGATCCAAAT 57.461 29.630 0.00 0.00 39.61 2.32
2883 3398 2.292267 AGATGCGCTTTCGGAATCAAT 58.708 42.857 9.73 0.00 40.05 2.57
2885 3400 1.737838 AAGATGCGCTTTCGGAATCA 58.262 45.000 9.73 0.00 40.05 2.57
2890 3405 4.278678 AGATTAAAAGATGCGCTTTCGG 57.721 40.909 9.73 0.00 45.85 4.30
2908 3423 4.035208 GTGGTTTCAAGAACACGACAAGAT 59.965 41.667 0.00 0.00 0.00 2.40
2934 3451 0.688487 TTACGGGTGTTCAAGGAGGG 59.312 55.000 0.00 0.00 0.00 4.30
2947 3464 0.390735 CCAAGGAAGTCGGTTACGGG 60.391 60.000 0.00 0.00 41.39 5.28
2989 3506 0.560193 CCTCCCTGATCTCCTCCTCA 59.440 60.000 0.00 0.00 0.00 3.86
3025 3542 1.377333 GCTTTACTGCCCCTCGCTT 60.377 57.895 0.00 0.00 38.78 4.68
3121 3639 6.143758 GCAACAACAACCATAACACAACTATG 59.856 38.462 0.00 0.00 0.00 2.23
3122 3640 6.183360 TGCAACAACAACCATAACACAACTAT 60.183 34.615 0.00 0.00 0.00 2.12
3126 3644 4.456280 TGCAACAACAACCATAACACAA 57.544 36.364 0.00 0.00 0.00 3.33
3196 3715 1.696832 GCCTGCTACGCTACAAGCAC 61.697 60.000 0.00 0.00 43.56 4.40
3197 3716 1.447838 GCCTGCTACGCTACAAGCA 60.448 57.895 0.00 0.00 46.11 3.91
3258 3780 2.515996 ATACGAACGGCCACCACCAG 62.516 60.000 2.24 0.00 0.00 4.00
3306 3831 1.070758 AGATGCAGAACCACTCACGTT 59.929 47.619 0.00 0.00 0.00 3.99
3307 3832 0.681733 AGATGCAGAACCACTCACGT 59.318 50.000 0.00 0.00 0.00 4.49
3318 3843 1.196766 AGGCCAGACACAGATGCAGA 61.197 55.000 5.01 0.00 0.00 4.26
3323 3848 1.002888 CAGAACAGGCCAGACACAGAT 59.997 52.381 5.01 0.00 0.00 2.90
3374 3900 1.661112 GCCAGATTCAGTGCGAGTAAC 59.339 52.381 0.00 0.00 0.00 2.50
3375 3901 1.550524 AGCCAGATTCAGTGCGAGTAA 59.449 47.619 0.00 0.00 0.00 2.24
3408 3934 3.967332 GGCAATCCCAATTCCCATATG 57.033 47.619 0.00 0.00 0.00 1.78
3427 3953 3.361977 CGGAGCAAACAACCCGGG 61.362 66.667 22.25 22.25 38.42 5.73
3447 3973 2.975410 TTGTCAGCGCTTCAATCTTG 57.025 45.000 7.50 0.00 0.00 3.02
3448 3974 3.988379 TTTTGTCAGCGCTTCAATCTT 57.012 38.095 20.48 0.00 0.00 2.40
3449 3975 3.366679 CCATTTTGTCAGCGCTTCAATCT 60.367 43.478 20.48 11.27 0.00 2.40
3450 3976 2.919229 CCATTTTGTCAGCGCTTCAATC 59.081 45.455 20.48 6.42 0.00 2.67
3451 3977 2.353011 CCCATTTTGTCAGCGCTTCAAT 60.353 45.455 20.48 8.41 0.00 2.57
3452 3978 1.000385 CCCATTTTGTCAGCGCTTCAA 60.000 47.619 7.50 14.09 0.00 2.69
3453 3979 0.597568 CCCATTTTGTCAGCGCTTCA 59.402 50.000 7.50 7.70 0.00 3.02
3454 3980 0.598065 ACCCATTTTGTCAGCGCTTC 59.402 50.000 7.50 4.53 0.00 3.86
3471 3997 4.610680 GCTGCGTCCATCGAATAATTAACC 60.611 45.833 0.00 0.00 42.86 2.85
3499 4025 5.532406 TCTGTTTCAGAATTTCAGGTTCAGG 59.468 40.000 0.00 0.00 37.57 3.86
3503 4029 4.881850 ACGTCTGTTTCAGAATTTCAGGTT 59.118 37.500 0.88 0.00 42.46 3.50
3516 4042 2.433868 TGTGCTAGGACGTCTGTTTC 57.566 50.000 16.46 0.00 0.00 2.78
3533 4059 3.562108 TTAGGGAGAGGAAGGAGTTGT 57.438 47.619 0.00 0.00 0.00 3.32
3536 4062 3.276307 AGGAATTAGGGAGAGGAAGGAGT 59.724 47.826 0.00 0.00 0.00 3.85
3541 4067 4.290942 GAGTCAGGAATTAGGGAGAGGAA 58.709 47.826 0.00 0.00 0.00 3.36
3542 4068 3.374318 GGAGTCAGGAATTAGGGAGAGGA 60.374 52.174 0.00 0.00 0.00 3.71
3558 4084 2.445145 AGAGCAGCTAGGATAGGAGTCA 59.555 50.000 0.00 0.00 39.70 3.41
3586 4113 4.227300 ACATACAAGTAAATGGCCAGAGGA 59.773 41.667 13.05 0.00 0.00 3.71
3644 4171 9.986157 ATGAAGTGATCTTATATAAATGGCCAT 57.014 29.630 14.09 14.09 33.64 4.40
3681 4208 9.965902 ACTAACTTGGATTTGAAGTGATCTTAT 57.034 29.630 0.00 0.00 33.85 1.73
3682 4209 9.793259 AACTAACTTGGATTTGAAGTGATCTTA 57.207 29.630 0.00 0.00 33.85 2.10
3683 4210 8.571336 CAACTAACTTGGATTTGAAGTGATCTT 58.429 33.333 0.00 0.00 33.85 2.40
3684 4211 7.939039 TCAACTAACTTGGATTTGAAGTGATCT 59.061 33.333 0.00 0.00 33.85 2.75
3685 4212 8.099364 TCAACTAACTTGGATTTGAAGTGATC 57.901 34.615 0.00 0.00 33.85 2.92
3686 4213 8.352942 GTTCAACTAACTTGGATTTGAAGTGAT 58.647 33.333 0.00 0.00 36.97 3.06
3687 4214 7.201785 GGTTCAACTAACTTGGATTTGAAGTGA 60.202 37.037 0.00 0.00 36.97 3.41
3688 4215 6.918022 GGTTCAACTAACTTGGATTTGAAGTG 59.082 38.462 0.00 0.00 36.97 3.16
3689 4216 6.238648 CGGTTCAACTAACTTGGATTTGAAGT 60.239 38.462 0.00 0.00 36.97 3.01
3690 4217 6.017440 TCGGTTCAACTAACTTGGATTTGAAG 60.017 38.462 0.00 0.00 36.97 3.02
3691 4218 5.823570 TCGGTTCAACTAACTTGGATTTGAA 59.176 36.000 0.00 0.00 38.23 2.69
3692 4219 5.369833 TCGGTTCAACTAACTTGGATTTGA 58.630 37.500 0.00 0.00 38.23 2.69
3693 4220 5.682943 TCGGTTCAACTAACTTGGATTTG 57.317 39.130 0.00 0.00 38.23 2.32
3694 4221 6.894339 ATTCGGTTCAACTAACTTGGATTT 57.106 33.333 0.00 0.00 38.23 2.17
3695 4222 7.989416 TTATTCGGTTCAACTAACTTGGATT 57.011 32.000 0.00 0.00 38.23 3.01
3696 4223 7.664318 AGTTTATTCGGTTCAACTAACTTGGAT 59.336 33.333 0.00 0.00 38.23 3.41
3697 4224 6.993902 AGTTTATTCGGTTCAACTAACTTGGA 59.006 34.615 0.00 0.00 38.23 3.53
3698 4225 7.041644 TCAGTTTATTCGGTTCAACTAACTTGG 60.042 37.037 0.00 0.00 38.23 3.61
3699 4226 7.857569 TCAGTTTATTCGGTTCAACTAACTTG 58.142 34.615 0.00 0.00 38.23 3.16
3700 4227 8.441312 TTCAGTTTATTCGGTTCAACTAACTT 57.559 30.769 0.00 0.00 38.23 2.66
3701 4228 7.713942 ACTTCAGTTTATTCGGTTCAACTAACT 59.286 33.333 0.00 0.00 38.23 2.24
3702 4229 7.858583 ACTTCAGTTTATTCGGTTCAACTAAC 58.141 34.615 0.00 0.00 37.36 2.34
3703 4230 9.545105 TTACTTCAGTTTATTCGGTTCAACTAA 57.455 29.630 0.00 0.00 0.00 2.24
3704 4231 9.545105 TTTACTTCAGTTTATTCGGTTCAACTA 57.455 29.630 0.00 0.00 0.00 2.24
3705 4232 8.441312 TTTACTTCAGTTTATTCGGTTCAACT 57.559 30.769 0.00 0.00 0.00 3.16
3706 4233 9.505995 TTTTTACTTCAGTTTATTCGGTTCAAC 57.494 29.630 0.00 0.00 0.00 3.18
3740 4267 9.906660 GTTTGGTTGTTCATCACAAGAAATATA 57.093 29.630 0.00 0.00 46.49 0.86
3741 4268 8.420222 TGTTTGGTTGTTCATCACAAGAAATAT 58.580 29.630 0.00 0.00 46.49 1.28
3742 4269 7.776107 TGTTTGGTTGTTCATCACAAGAAATA 58.224 30.769 0.00 0.00 46.49 1.40
3743 4270 6.638610 TGTTTGGTTGTTCATCACAAGAAAT 58.361 32.000 0.00 0.00 46.49 2.17
3744 4271 6.030548 TGTTTGGTTGTTCATCACAAGAAA 57.969 33.333 0.00 0.00 46.49 2.52
3745 4272 5.651387 TGTTTGGTTGTTCATCACAAGAA 57.349 34.783 0.00 0.00 46.49 2.52
3746 4273 5.184864 ACTTGTTTGGTTGTTCATCACAAGA 59.815 36.000 14.39 0.00 46.49 3.02
3747 4274 5.410067 ACTTGTTTGGTTGTTCATCACAAG 58.590 37.500 7.44 7.44 46.49 3.16
3748 4275 5.398603 ACTTGTTTGGTTGTTCATCACAA 57.601 34.783 0.00 0.00 43.55 3.33
3749 4276 5.167121 CAACTTGTTTGGTTGTTCATCACA 58.833 37.500 0.00 0.00 39.14 3.58
3750 4277 5.701029 CAACTTGTTTGGTTGTTCATCAC 57.299 39.130 0.00 0.00 39.14 3.06
3758 4285 7.363205 AGAAAAATGACAACTTGTTTGGTTG 57.637 32.000 0.00 5.23 46.42 3.77
3759 4286 7.443879 ACAAGAAAAATGACAACTTGTTTGGTT 59.556 29.630 0.00 0.00 45.37 3.67
3760 4287 6.934083 ACAAGAAAAATGACAACTTGTTTGGT 59.066 30.769 0.00 0.00 45.37 3.67
3761 4288 7.363205 ACAAGAAAAATGACAACTTGTTTGG 57.637 32.000 0.00 0.00 45.37 3.28
3762 4289 8.920665 TGTACAAGAAAAATGACAACTTGTTTG 58.079 29.630 14.28 0.00 45.37 2.93
3763 4290 9.651913 ATGTACAAGAAAAATGACAACTTGTTT 57.348 25.926 14.28 1.08 45.37 2.83
3764 4291 9.086336 CATGTACAAGAAAAATGACAACTTGTT 57.914 29.630 14.28 0.00 45.37 2.83
3766 4293 8.854979 TCATGTACAAGAAAAATGACAACTTG 57.145 30.769 0.00 0.00 42.11 3.16
3767 4294 8.686334 ACTCATGTACAAGAAAAATGACAACTT 58.314 29.630 0.00 0.00 0.00 2.66
3768 4295 8.225603 ACTCATGTACAAGAAAAATGACAACT 57.774 30.769 0.00 0.00 0.00 3.16
3769 4296 8.128582 TGACTCATGTACAAGAAAAATGACAAC 58.871 33.333 0.00 0.00 0.00 3.32
3770 4297 8.219546 TGACTCATGTACAAGAAAAATGACAA 57.780 30.769 0.00 0.00 0.00 3.18
3771 4298 7.800155 TGACTCATGTACAAGAAAAATGACA 57.200 32.000 0.00 0.00 0.00 3.58
3772 4299 9.683069 ATTTGACTCATGTACAAGAAAAATGAC 57.317 29.630 0.00 0.00 0.00 3.06
3776 4303 9.515020 GTGAATTTGACTCATGTACAAGAAAAA 57.485 29.630 0.00 2.98 0.00 1.94
3777 4304 8.902806 AGTGAATTTGACTCATGTACAAGAAAA 58.097 29.630 0.00 0.00 0.00 2.29
3778 4305 8.450578 AGTGAATTTGACTCATGTACAAGAAA 57.549 30.769 0.00 0.00 0.00 2.52
3779 4306 8.988934 GTAGTGAATTTGACTCATGTACAAGAA 58.011 33.333 0.00 0.00 0.00 2.52
3780 4307 8.367911 AGTAGTGAATTTGACTCATGTACAAGA 58.632 33.333 0.00 0.00 0.00 3.02
3781 4308 8.539770 AGTAGTGAATTTGACTCATGTACAAG 57.460 34.615 0.00 0.00 0.00 3.16
3782 4309 9.990360 TTAGTAGTGAATTTGACTCATGTACAA 57.010 29.630 0.00 0.00 0.00 2.41
3783 4310 9.639601 CTTAGTAGTGAATTTGACTCATGTACA 57.360 33.333 0.00 0.00 0.00 2.90
3784 4311 8.596380 GCTTAGTAGTGAATTTGACTCATGTAC 58.404 37.037 0.00 0.00 0.00 2.90
3785 4312 8.311109 TGCTTAGTAGTGAATTTGACTCATGTA 58.689 33.333 0.00 0.00 0.00 2.29
3786 4313 7.118390 GTGCTTAGTAGTGAATTTGACTCATGT 59.882 37.037 0.00 0.00 0.00 3.21
3787 4314 7.118245 TGTGCTTAGTAGTGAATTTGACTCATG 59.882 37.037 0.00 0.00 0.00 3.07
3788 4315 7.161404 TGTGCTTAGTAGTGAATTTGACTCAT 58.839 34.615 0.00 0.00 0.00 2.90
3789 4316 6.521162 TGTGCTTAGTAGTGAATTTGACTCA 58.479 36.000 0.00 0.00 0.00 3.41
3790 4317 7.602517 ATGTGCTTAGTAGTGAATTTGACTC 57.397 36.000 0.00 0.00 0.00 3.36
3791 4318 9.502091 TTTATGTGCTTAGTAGTGAATTTGACT 57.498 29.630 0.00 0.00 0.00 3.41
3842 4369 9.974980 GGATGTGTTTACCATTTTAAAAAGAGA 57.025 29.630 4.44 0.00 0.00 3.10
3843 4370 9.757227 TGGATGTGTTTACCATTTTAAAAAGAG 57.243 29.630 4.44 0.00 0.00 2.85
3848 4375 9.110502 GGTTTTGGATGTGTTTACCATTTTAAA 57.889 29.630 0.00 0.00 33.56 1.52
3849 4376 8.265055 TGGTTTTGGATGTGTTTACCATTTTAA 58.735 29.630 0.00 0.00 33.56 1.52
3850 4377 7.792032 TGGTTTTGGATGTGTTTACCATTTTA 58.208 30.769 0.00 0.00 33.56 1.52
3851 4378 6.653989 TGGTTTTGGATGTGTTTACCATTTT 58.346 32.000 0.00 0.00 33.56 1.82
3852 4379 6.240549 TGGTTTTGGATGTGTTTACCATTT 57.759 33.333 0.00 0.00 33.56 2.32
3853 4380 5.878406 TGGTTTTGGATGTGTTTACCATT 57.122 34.783 0.00 0.00 33.56 3.16
3854 4381 5.541868 TGATGGTTTTGGATGTGTTTACCAT 59.458 36.000 0.00 0.00 45.00 3.55
3855 4382 4.895889 TGATGGTTTTGGATGTGTTTACCA 59.104 37.500 0.00 0.00 38.43 3.25
3856 4383 5.461032 TGATGGTTTTGGATGTGTTTACC 57.539 39.130 0.00 0.00 0.00 2.85
3857 4384 8.519526 TCTATTGATGGTTTTGGATGTGTTTAC 58.480 33.333 0.00 0.00 0.00 2.01
3858 4385 8.642935 TCTATTGATGGTTTTGGATGTGTTTA 57.357 30.769 0.00 0.00 0.00 2.01
3859 4386 7.537596 TCTATTGATGGTTTTGGATGTGTTT 57.462 32.000 0.00 0.00 0.00 2.83
3860 4387 7.549839 CATCTATTGATGGTTTTGGATGTGTT 58.450 34.615 9.04 0.00 44.63 3.32
3861 4388 7.104043 CATCTATTGATGGTTTTGGATGTGT 57.896 36.000 9.04 0.00 44.63 3.72
3874 4401 7.761249 ATGCATGCATTGATTCATCTATTGATG 59.239 33.333 27.46 10.49 41.31 3.07
3875 4402 7.227049 TGCATGCATTGATTCATCTATTGAT 57.773 32.000 18.46 0.00 33.34 2.57
3876 4403 6.642707 TGCATGCATTGATTCATCTATTGA 57.357 33.333 18.46 0.00 0.00 2.57
3879 4406 9.403583 TGTATATGCATGCATTGATTCATCTAT 57.596 29.630 36.23 21.35 37.82 1.98
3880 4407 8.671028 GTGTATATGCATGCATTGATTCATCTA 58.329 33.333 36.23 16.04 37.82 1.98
3881 4408 7.393515 AGTGTATATGCATGCATTGATTCATCT 59.606 33.333 36.23 21.51 37.82 2.90
3882 4409 7.535997 AGTGTATATGCATGCATTGATTCATC 58.464 34.615 36.23 20.09 37.82 2.92
3883 4410 7.462571 AGTGTATATGCATGCATTGATTCAT 57.537 32.000 36.23 24.03 37.82 2.57
3884 4411 6.887626 AGTGTATATGCATGCATTGATTCA 57.112 33.333 36.23 24.15 37.82 2.57
3885 4412 7.143340 ACAAGTGTATATGCATGCATTGATTC 58.857 34.615 36.23 22.07 37.82 2.52
3886 4413 7.046292 ACAAGTGTATATGCATGCATTGATT 57.954 32.000 36.23 20.80 37.82 2.57
3887 4414 6.644248 ACAAGTGTATATGCATGCATTGAT 57.356 33.333 36.23 26.07 37.82 2.57
3888 4415 7.748691 ATACAAGTGTATATGCATGCATTGA 57.251 32.000 36.23 21.29 39.29 2.57
3916 4443 9.862371 ACTCAAAACACATACAATTTTACACAA 57.138 25.926 0.00 0.00 0.00 3.33
3917 4444 9.509855 GACTCAAAACACATACAATTTTACACA 57.490 29.630 0.00 0.00 0.00 3.72
3918 4445 9.509855 TGACTCAAAACACATACAATTTTACAC 57.490 29.630 0.00 0.00 0.00 2.90
3949 4476 6.693545 AGTTGACGCGAATTTGAATTTACAAA 59.306 30.769 15.93 0.00 42.58 2.83
3950 4477 6.202937 AGTTGACGCGAATTTGAATTTACAA 58.797 32.000 15.93 0.00 0.00 2.41
3951 4478 5.753744 AGTTGACGCGAATTTGAATTTACA 58.246 33.333 15.93 0.00 0.00 2.41
3952 4479 6.669485 AAGTTGACGCGAATTTGAATTTAC 57.331 33.333 15.93 0.00 0.00 2.01
3953 4480 6.143118 CCAAAGTTGACGCGAATTTGAATTTA 59.857 34.615 15.93 0.00 33.69 1.40
3954 4481 5.051106 CCAAAGTTGACGCGAATTTGAATTT 60.051 36.000 15.93 1.27 33.69 1.82
3955 4482 4.444056 CCAAAGTTGACGCGAATTTGAATT 59.556 37.500 15.93 0.00 33.69 2.17
3956 4483 3.980775 CCAAAGTTGACGCGAATTTGAAT 59.019 39.130 15.93 0.00 33.69 2.57
3957 4484 3.181495 ACCAAAGTTGACGCGAATTTGAA 60.181 39.130 15.93 0.00 33.69 2.69
3958 4485 2.356382 ACCAAAGTTGACGCGAATTTGA 59.644 40.909 15.93 0.00 33.69 2.69
3959 4486 2.726633 ACCAAAGTTGACGCGAATTTG 58.273 42.857 15.93 12.71 0.00 2.32
3960 4487 3.430333 AACCAAAGTTGACGCGAATTT 57.570 38.095 15.93 0.00 33.97 1.82
3961 4488 3.430333 AAACCAAAGTTGACGCGAATT 57.570 38.095 15.93 0.00 35.97 2.17
3962 4489 3.430333 AAAACCAAAGTTGACGCGAAT 57.570 38.095 15.93 0.00 35.97 3.34
3963 4490 2.923605 AAAACCAAAGTTGACGCGAA 57.076 40.000 15.93 0.00 35.97 4.70
3964 4491 2.923605 AAAAACCAAAGTTGACGCGA 57.076 40.000 15.93 0.00 35.97 5.87
3965 4492 3.423867 CCATAAAAACCAAAGTTGACGCG 59.576 43.478 3.53 3.53 35.97 6.01
3966 4493 4.364860 ACCATAAAAACCAAAGTTGACGC 58.635 39.130 0.00 0.00 35.97 5.19
3967 4494 8.291032 TGTATACCATAAAAACCAAAGTTGACG 58.709 33.333 0.00 0.00 35.97 4.35
3968 4495 9.401873 GTGTATACCATAAAAACCAAAGTTGAC 57.598 33.333 0.00 0.00 35.97 3.18
3969 4496 8.578151 GGTGTATACCATAAAAACCAAAGTTGA 58.422 33.333 3.35 0.00 46.71 3.18
3970 4497 8.751302 GGTGTATACCATAAAAACCAAAGTTG 57.249 34.615 3.35 0.00 46.71 3.16
3986 4513 3.003275 TCGATACGGTTTCGGTGTATACC 59.997 47.826 18.41 0.00 43.89 2.73
3987 4514 4.209452 TCGATACGGTTTCGGTGTATAC 57.791 45.455 18.41 0.00 41.39 1.47
3988 4515 4.891627 TTCGATACGGTTTCGGTGTATA 57.108 40.909 18.41 0.00 41.39 1.47
3989 4516 3.781079 TTCGATACGGTTTCGGTGTAT 57.219 42.857 18.41 0.00 41.39 2.29
3990 4517 3.567576 TTTCGATACGGTTTCGGTGTA 57.432 42.857 18.41 0.00 41.39 2.90
3991 4518 2.437200 TTTCGATACGGTTTCGGTGT 57.563 45.000 18.41 0.00 41.39 4.16
3992 4519 5.646467 ATTATTTCGATACGGTTTCGGTG 57.354 39.130 18.41 0.00 41.39 4.94
3993 4520 6.457257 CCAAATTATTTCGATACGGTTTCGGT 60.457 38.462 18.41 9.41 41.39 4.69
3994 4521 5.905181 CCAAATTATTTCGATACGGTTTCGG 59.095 40.000 18.41 3.39 41.39 4.30
3995 4522 6.480285 ACCAAATTATTTCGATACGGTTTCG 58.520 36.000 13.68 13.68 43.02 3.46
4006 4533 9.815936 GGTTTCGGTATATACCAAATTATTTCG 57.184 33.333 27.58 12.15 46.80 3.46
4007 4534 9.815936 CGGTTTCGGTATATACCAAATTATTTC 57.184 33.333 27.58 14.34 46.80 2.17
4008 4535 9.558396 TCGGTTTCGGTATATACCAAATTATTT 57.442 29.630 27.58 0.00 46.80 1.40
4009 4536 9.558396 TTCGGTTTCGGTATATACCAAATTATT 57.442 29.630 27.58 0.00 46.80 1.40
4010 4537 8.992073 GTTCGGTTTCGGTATATACCAAATTAT 58.008 33.333 27.58 0.00 46.80 1.28
4011 4538 8.203485 AGTTCGGTTTCGGTATATACCAAATTA 58.797 33.333 27.58 14.29 46.80 1.40
4012 4539 7.011669 CAGTTCGGTTTCGGTATATACCAAATT 59.988 37.037 27.58 7.35 46.80 1.82
4013 4540 6.480981 CAGTTCGGTTTCGGTATATACCAAAT 59.519 38.462 27.58 11.67 46.80 2.32
4014 4541 5.811613 CAGTTCGGTTTCGGTATATACCAAA 59.188 40.000 27.58 22.18 46.80 3.28
4015 4542 5.105392 ACAGTTCGGTTTCGGTATATACCAA 60.105 40.000 27.58 18.57 46.80 3.67
4016 4543 4.402155 ACAGTTCGGTTTCGGTATATACCA 59.598 41.667 27.58 14.40 46.80 3.25
4017 4544 4.936891 ACAGTTCGGTTTCGGTATATACC 58.063 43.478 20.39 20.39 42.98 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.