AutoCloner

Multiple sequence alignment - TraesCS2D01G323400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS2D01G323400	chr2D	100.000	9593	0	0	1	9593	416399209	416389617	0.000000e+00	17716.0
1	TraesCS2D01G323400	chr2D	87.513	977	66	29	1331	2265	414960214	414959252	0.000000e+00	1077.0
2	TraesCS2D01G323400	chr2D	87.543	875	68	19	8323	9170	414957646	414956786	0.000000e+00	974.0
3	TraesCS2D01G323400	chr2D	90.448	513	27	9	6858	7364	414959256	414958760	0.000000e+00	656.0
4	TraesCS2D01G323400	chr2D	86.989	538	49	9	7796	8321	414958308	414957780	3.860000e-163	586.0
5	TraesCS2D01G323400	chr2D	94.982	279	10	4	6050	6327	120543541	120543816	1.480000e-117	435.0
6	TraesCS2D01G323400	chr2D	83.099	142	21	2	6162	6303	271526596	271526734	1.010000e-24	126.0
7	TraesCS2D01G323400	chr2D	96.053	76	3	0	6511	6586	416392630	416392555	3.640000e-24	124.0
8	TraesCS2D01G323400	chr2D	82.432	74	11	2	9172	9245	161991801	161991730	8.040000e-06	63.9
9	TraesCS2D01G323400	chr5D	97.401	4233	70	11	2279	6498	397830408	397834613	0.000000e+00	7171.0
10	TraesCS2D01G323400	chr5D	97.970	3842	52	5	2279	6104	256738249	256742080	0.000000e+00	6639.0
11	TraesCS2D01G323400	chr5D	96.403	278	10	0	6580	6857	77001876	77001599	8.780000e-125	459.0
12	TraesCS2D01G323400	chr5D	96.727	275	7	2	6585	6857	121083480	121083754	3.160000e-124	457.0
13	TraesCS2D01G323400	chr5D	93.750	288	14	4	6571	6857	61461314	61461030	6.880000e-116	429.0
14	TraesCS2D01G323400	chr5D	95.556	90	4	0	6497	6586	77001890	77001801	2.790000e-30	145.0
15	TraesCS2D01G323400	chr5D	84.252	127	20	0	6182	6308	162438600	162438726	3.640000e-24	124.0
16	TraesCS2D01G323400	chr5D	96.825	63	2	0	6524	6586	121083490	121083552	1.320000e-18	106.0
17	TraesCS2D01G323400	chr6D	98.275	3827	49	4	2279	6104	464439563	464435753	0.000000e+00	6685.0
18	TraesCS2D01G323400	chr6D	97.237	3836	87	4	2279	6104	105063514	105059688	0.000000e+00	6479.0
19	TraesCS2D01G323400	chr6D	91.877	3447	241	26	2279	5705	277122480	277125907	0.000000e+00	4778.0
20	TraesCS2D01G323400	chr6D	96.718	2011	47	6	4122	6126	86939740	86937743	0.000000e+00	3330.0
21	TraesCS2D01G323400	chr6D	95.307	277	10	2	6580	6856	7685734	7685461	4.110000e-118	436.0
22	TraesCS2D01G323400	chr6D	95.041	242	10	2	6617	6857	47042726	47042486	7.030000e-101	379.0
23	TraesCS2D01G323400	chr6D	90.110	273	16	4	6587	6857	304103147	304102884	2.560000e-90	344.0
24	TraesCS2D01G323400	chr6D	96.392	194	6	1	6664	6857	105059069	105058877	1.550000e-82	318.0
25	TraesCS2D01G323400	chr6D	92.523	214	11	5	6647	6858	266791801	266792011	1.570000e-77	302.0
26	TraesCS2D01G323400	chr6D	94.444	198	6	4	6663	6857	86937192	86936997	5.630000e-77	300.0
27	TraesCS2D01G323400	chr6D	91.667	216	10	7	6646	6858	459053216	459053006	9.420000e-75	292.0
28	TraesCS2D01G323400	chr6D	91.589	214	13	4	6646	6857	95300204	95300414	3.390000e-74	291.0
29	TraesCS2D01G323400	chr6D	95.506	89	3	1	6497	6585	7685748	7685661	3.610000e-29	141.0
30	TraesCS2D01G323400	chr6D	88.158	76	4	4	6557	6630	7685899	7685827	1.720000e-12	86.1
31	TraesCS2D01G323400	chr6D	100.000	28	0	0	9172	9199	82543879	82543852	1.700000e-02	52.8
32	TraesCS2D01G323400	chr7D	98.200	3833	50	4	2279	6104	334831382	334835202	0.000000e+00	6678.0
33	TraesCS2D01G323400	chr7D	97.835	3833	67	4	2279	6104	110931440	110935263	0.000000e+00	6604.0
34	TraesCS2D01G323400	chr7D	97.418	3679	75	6	2455	6126	634962348	634966013	0.000000e+00	6250.0
35	TraesCS2D01G323400	chr7D	91.384	383	24	9	6480	6858	608434516	608434139	5.140000e-142	516.0
36	TraesCS2D01G323400	chr7D	97.122	278	8	0	6580	6857	316381921	316381644	4.060000e-128	470.0
37	TraesCS2D01G323400	chr7D	81.567	217	33	7	9299	9512	309180308	309180520	1.280000e-38	172.0
38	TraesCS2D01G323400	chr7D	95.556	90	4	0	6497	6586	316381935	316381846	2.790000e-30	145.0
39	TraesCS2D01G323400	chr7D	86.813	91	9	3	6496	6584	608434432	608434343	2.200000e-16	99.0
40	TraesCS2D01G323400	chr7D	81.915	94	11	6	9168	9259	478217928	478217839	3.720000e-09	75.0
41	TraesCS2D01G323400	chr7D	77.869	122	25	2	9169	9289	575577165	575577285	3.720000e-09	75.0
42	TraesCS2D01G323400	chr7D	83.824	68	9	2	9172	9239	37533476	37533541	8.040000e-06	63.9
43	TraesCS2D01G323400	chr1D	97.809	3833	67	4	2279	6104	51928315	51932137	0.000000e+00	6597.0
44	TraesCS2D01G323400	chr1D	97.678	3833	69	5	2279	6104	116473597	116477416	0.000000e+00	6567.0
45	TraesCS2D01G323400	chr1D	97.186	1990	40	3	4122	6104	479725670	479723690	0.000000e+00	3350.0
46	TraesCS2D01G323400	chr1D	96.956	1347	31	2	4759	6104	37444373	37445710	0.000000e+00	2252.0
47	TraesCS2D01G323400	chr1D	94.792	288	11	4	6571	6857	196484302	196484586	6.840000e-121	446.0
48	TraesCS2D01G323400	chr1D	97.403	231	5	1	6098	6327	37904743	37904973	9.030000e-105	392.0
49	TraesCS2D01G323400	chr1D	94.444	252	10	4	6609	6857	495009633	495009883	1.510000e-102	385.0
50	TraesCS2D01G323400	chr1D	95.062	243	8	3	6617	6856	460858828	460858587	7.030000e-101	379.0
51	TraesCS2D01G323400	chr1D	85.714	147	21	0	6162	6308	37445728	37445874	1.290000e-33	156.0
52	TraesCS2D01G323400	chr1D	82.443	131	18	3	6182	6308	62149540	62149669	1.020000e-19	110.0
53	TraesCS2D01G323400	chr1D	91.139	79	5	2	6510	6586	196484307	196484385	1.320000e-18	106.0
54	TraesCS2D01G323400	chr1D	86.076	79	8	3	9436	9513	60177186	60177262	2.220000e-11	82.4
55	TraesCS2D01G323400	chr1D	83.333	84	14	0	9336	9419	420382427	420382510	2.870000e-10	78.7
56	TraesCS2D01G323400	chr1D	100.000	29	0	0	179	207	116481272	116481244	5.000000e-03	54.7
57	TraesCS2D01G323400	chr1D	100.000	29	0	0	179	207	116481312	116481284	5.000000e-03	54.7
58	TraesCS2D01G323400	chr3D	97.806	3829	66	3	2279	6101	253391732	253387916	0.000000e+00	6589.0
59	TraesCS2D01G323400	chr3D	92.303	3495	227	26	2279	5755	105449737	105446267	0.000000e+00	4926.0
60	TraesCS2D01G323400	chr3D	92.560	3441	225	21	2279	5705	219562283	219565706	0.000000e+00	4907.0
61	TraesCS2D01G323400	chr3D	97.238	1991	35	6	4122	6104	545058224	545056246	0.000000e+00	3354.0
62	TraesCS2D01G323400	chr3D	97.227	613	7	2	5493	6104	465776714	465776111	0.000000e+00	1029.0
63	TraesCS2D01G323400	chr3D	97.849	279	6	0	6580	6858	47790159	47789881	5.210000e-132	483.0
64	TraesCS2D01G323400	chr3D	79.156	379	56	15	9170	9532	113027874	113027503	3.460000e-59	241.0
65	TraesCS2D01G323400	chr3D	95.556	90	4	0	6497	6586	47790173	47790084	2.790000e-30	145.0
66	TraesCS2D01G323400	chr3D	73.740	377	75	21	9171	9532	523828981	523828614	1.010000e-24	126.0
67	TraesCS2D01G323400	chr3D	82.759	116	17	3	6168	6281	346951362	346951476	6.130000e-17	100.0
68	TraesCS2D01G323400	chr3D	90.909	44	2	2	167	208	439632169	439632212	3.740000e-04	58.4
69	TraesCS2D01G323400	chr4D	97.730	3833	68	5	2279	6104	317195518	317191698	0.000000e+00	6578.0
70	TraesCS2D01G323400	chr4D	97.574	3833	71	5	2279	6104	179855800	179851983	0.000000e+00	6543.0
71	TraesCS2D01G323400	chr4D	97.093	1789	37	2	4122	5904	111601931	111600152	0.000000e+00	3001.0
72	TraesCS2D01G323400	chr4D	96.839	1803	40	3	4122	5918	132675137	132676928	0.000000e+00	2998.0
73	TraesCS2D01G323400	chr4D	93.557	1521	81	7	4278	5791	350495860	350494350	0.000000e+00	2250.0
74	TraesCS2D01G323400	chr4D	97.122	278	8	0	6580	6857	493748508	493748785	4.060000e-128	470.0
75	TraesCS2D01G323400	chr4D	96.167	287	8	2	6571	6857	365416211	365415928	5.250000e-127	466.0
76	TraesCS2D01G323400	chr4D	97.674	215	4	1	6645	6859	62772136	62771923	1.520000e-97	368.0
77	TraesCS2D01G323400	chr4D	97.403	154	3	1	5952	6104	111600155	111600002	2.660000e-65	261.0
78	TraesCS2D01G323400	chr4D	76.883	385	61	20	9172	9545	459422130	459421763	9.830000e-45	193.0
79	TraesCS2D01G323400	chr4D	77.640	322	56	13	9172	9481	467606147	467606464	2.130000e-41	182.0
80	TraesCS2D01G323400	chr4D	75.798	376	72	12	9172	9535	506716807	506716439	1.280000e-38	172.0
81	TraesCS2D01G323400	chr4D	82.383	193	26	8	513	699	3747595	3747405	2.770000e-35	161.0
82	TraesCS2D01G323400	chr4D	96.667	90	3	0	6497	6586	493748494	493748583	6.000000e-32	150.0
83	TraesCS2D01G323400	chr4D	95.122	82	4	0	6510	6591	365416206	365416125	7.820000e-26	130.0
84	TraesCS2D01G323400	chr4D	76.829	164	33	5	9383	9544	110251348	110251508	4.770000e-13	87.9
85	TraesCS2D01G323400	chr4D	85.897	78	11	0	6204	6281	297306940	297307017	6.170000e-12	84.2
86	TraesCS2D01G323400	chr4D	96.078	51	2	0	6580	6630	493748360	493748410	6.170000e-12	84.2
87	TraesCS2D01G323400	chr4D	75.595	168	39	2	9376	9542	473826196	473826362	2.220000e-11	82.4
88	TraesCS2D01G323400	chr2A	88.736	4057	404	25	2279	6308	461021589	461017559	0.000000e+00	4911.0
89	TraesCS2D01G323400	chr2A	98.191	829	15	0	7461	8289	582635050	582634222	0.000000e+00	1448.0
90	TraesCS2D01G323400	chr2A	86.799	909	71	19	8323	9194	581943710	581942814	0.000000e+00	968.0
91	TraesCS2D01G323400	chr2A	93.081	607	18	9	6858	7462	582635716	582635132	0.000000e+00	867.0
92	TraesCS2D01G323400	chr2A	90.226	665	38	11	1224	1869	582636666	582636010	0.000000e+00	843.0
93	TraesCS2D01G323400	chr2A	88.583	508	46	6	7796	8295	581944213	581943710	2.960000e-169	606.0
94	TraesCS2D01G323400	chr2A	94.474	380	13	5	6858	7237	581945521	581945150	6.460000e-161	579.0
95	TraesCS2D01G323400	chr2A	87.398	492	19	9	710	1185	582637262	582636798	8.530000e-145	525.0
96	TraesCS2D01G323400	chr2A	89.021	419	23	10	1855	2265	581945920	581945517	1.860000e-136	497.0
97	TraesCS2D01G323400	chr2A	84.031	382	30	13	1331	1684	581959622	581959244	1.190000e-88	339.0
98	TraesCS2D01G323400	chr2A	79.878	492	70	17	7234	7716	581944730	581944259	5.550000e-87	333.0
99	TraesCS2D01G323400	chr2A	88.933	253	13	3	2016	2265	582635952	582635712	2.030000e-76	298.0
100	TraesCS2D01G323400	chr2A	89.326	178	12	4	1680	1850	581950658	581950481	5.830000e-52	217.0
101	TraesCS2D01G323400	chr2A	88.710	62	4	3	9166	9226	466760027	466759968	1.340000e-08	73.1
102	TraesCS2D01G323400	chrUn	93.000	3357	209	9	2631	5981	231453284	231456620	0.000000e+00	4874.0
103	TraesCS2D01G323400	chrUn	87.707	3750	394	38	2279	5989	11178690	11182411	0.000000e+00	4309.0
104	TraesCS2D01G323400	chrUn	92.988	2681	171	5	3230	5904	301213464	301210795	0.000000e+00	3893.0
105	TraesCS2D01G323400	chrUn	97.959	1372	17	3	4710	6081	93039762	93041122	0.000000e+00	2368.0
106	TraesCS2D01G323400	chrUn	89.754	1425	131	4	4486	5904	397273168	397271753	0.000000e+00	1808.0
107	TraesCS2D01G323400	chrUn	97.311	595	6	2	5511	6104	402809515	402808930	0.000000e+00	1002.0
108	TraesCS2D01G323400	chrUn	95.062	243	10	2	6617	6858	80049115	80048874	1.950000e-101	381.0
109	TraesCS2D01G323400	chrUn	90.657	289	20	6	6570	6857	112243419	112243137	2.530000e-100	377.0
110	TraesCS2D01G323400	chrUn	93.651	189	9	3	6669	6857	45245855	45246040	7.340000e-71	279.0
111	TraesCS2D01G323400	chrUn	91.584	202	8	8	6669	6866	301210069	301209873	4.420000e-68	270.0
112	TraesCS2D01G323400	chrUn	91.414	198	14	3	6669	6865	402808336	402808141	1.590000e-67	268.0
113	TraesCS2D01G323400	chrUn	91.089	202	9	8	6669	6866	231457279	231457475	2.050000e-66	265.0
114	TraesCS2D01G323400	chrUn	90.594	202	10	8	6669	6866	275534516	275534712	9.560000e-65	259.0
115	TraesCS2D01G323400	chrUn	91.099	191	13	3	6670	6858	211158067	211158255	1.240000e-63	255.0
116	TraesCS2D01G323400	chrUn	86.364	220	23	6	6642	6858	87958906	87959121	5.790000e-57	233.0
117	TraesCS2D01G323400	chrUn	78.541	233	43	4	9311	9543	383903321	383903546	7.760000e-31	147.0
118	TraesCS2D01G323400	chrUn	77.114	201	36	4	5449	5649	60497441	60497631	3.660000e-19	108.0
119	TraesCS2D01G323400	chrUn	76.961	204	37	4	5449	5652	377036010	377035817	3.660000e-19	108.0
120	TraesCS2D01G323400	chrUn	77.114	201	36	4	5449	5649	477200505	477200695	3.660000e-19	108.0
121	TraesCS2D01G323400	chr3A	91.325	3366	260	21	2282	5629	550405217	550401866	0.000000e+00	4569.0
122	TraesCS2D01G323400	chr3A	88.352	3271	356	19	2284	5540	353175243	353178502	0.000000e+00	3906.0
123	TraesCS2D01G323400	chr3A	93.333	240	16	0	6069	6308	65406611	65406850	1.180000e-93	355.0
124	TraesCS2D01G323400	chr3A	78.249	377	67	11	9171	9541	477420938	477420571	2.700000e-55	228.0
125	TraesCS2D01G323400	chr3A	75.385	390	71	20	9171	9543	33849198	33848817	2.140000e-36	165.0
126	TraesCS2D01G323400	chr2B	90.148	3441	297	27	2279	5705	440346890	440343478	0.000000e+00	4438.0
127	TraesCS2D01G323400	chr2B	92.931	1061	50	19	1224	2265	488196827	488195773	0.000000e+00	1520.0
128	TraesCS2D01G323400	chr2B	87.785	876	58	32	6859	7721	488195776	488194937	0.000000e+00	979.0
129	TraesCS2D01G323400	chr2B	88.207	831	79	14	7817	8636	488194903	488194081	0.000000e+00	974.0
130	TraesCS2D01G323400	chr2B	89.050	484	37	6	1	481	488197942	488197472	3.860000e-163	586.0
131	TraesCS2D01G323400	chr2B	85.231	562	42	18	8660	9194	488194090	488193543	3.050000e-149	540.0
132	TraesCS2D01G323400	chr2B	85.193	466	26	19	770	1219	488197345	488196907	1.140000e-118	438.0
133	TraesCS2D01G323400	chr2B	77.806	392	67	13	9165	9542	410939453	410939068	3.490000e-54	224.0
134	TraesCS2D01G323400	chr2B	94.444	54	2	1	700	753	488197394	488197342	2.220000e-11	82.4
135	TraesCS2D01G323400	chr6A	89.394	3102	273	27	2684	5755	34298797	34295722	0.000000e+00	3855.0
136	TraesCS2D01G323400	chr6A	84.118	170	25	2	9376	9545	588614124	588614291	7.710000e-36	163.0
137	TraesCS2D01G323400	chr6A	86.047	86	11	1	9171	9256	573135592	573135508	3.690000e-14	91.6
138	TraesCS2D01G323400	chr6A	83.000	100	15	2	9444	9542	426643151	426643249	1.330000e-13	89.8
139	TraesCS2D01G323400	chr1A	85.873	3157	407	29	2643	5783	373379987	373383120	0.000000e+00	3323.0
140	TraesCS2D01G323400	chr1A	85.897	78	10	1	9468	9545	574683708	574683632	2.220000e-11	82.4
141	TraesCS2D01G323400	chr1A	100.000	30	0	0	9170	9199	371256100	371256071	1.000000e-03	56.5
142	TraesCS2D01G323400	chr7B	93.671	237	15	0	6072	6308	155300553	155300317	1.180000e-93	355.0
143	TraesCS2D01G323400	chr7B	91.453	234	20	0	6075	6308	154813111	154812878	1.200000e-83	322.0
144	TraesCS2D01G323400	chr7B	81.290	155	27	2	9358	9512	669129162	669129010	3.640000e-24	124.0
145	TraesCS2D01G323400	chr3B	92.140	229	17	1	6075	6303	323325784	323325557	1.200000e-83	322.0
146	TraesCS2D01G323400	chr3B	78.497	386	63	13	9172	9545	753795360	753794983	1.610000e-57	235.0
147	TraesCS2D01G323400	chr3B	90.476	42	3	1	166	207	10961713	10961753	5.000000e-03	54.7
148	TraesCS2D01G323400	chr7A	78.866	388	63	12	9170	9545	11236288	11236668	2.680000e-60	244.0
149	TraesCS2D01G323400	chr7A	76.984	378	70	17	9171	9542	470126176	470125810	5.880000e-47	200.0
150	TraesCS2D01G323400	chr4B	77.604	384	72	10	9173	9545	4532338	4531958	4.510000e-53	220.0
151	TraesCS2D01G323400	chr1B	76.033	363	62	14	9188	9545	459815827	459816169	2.140000e-36	165.0
152	TraesCS2D01G323400	chr1B	96.875	32	1	0	9172	9203	626688981	626689012	5.000000e-03	54.7
153	TraesCS2D01G323400	chr1B	94.286	35	1	1	9166	9199	370375687	370375653	1.700000e-02	52.8
154	TraesCS2D01G323400	chr5A	80.488	205	31	8	508	706	647108112	647108313	2.160000e-31	148.0
155	TraesCS2D01G323400	chr5A	81.215	181	30	4	518	696	3327023	3326845	1.000000e-29	143.0
156	TraesCS2D01G323400	chr5A	85.124	121	18	0	6182	6302	260687163	260687283	3.640000e-24	124.0
157	TraesCS2D01G323400	chr5A	77.387	199	37	6	9309	9506	227621	227430	2.830000e-20	111.0
158	TraesCS2D01G323400	chr5A	87.654	81	9	1	615	695	26450336	26450415	1.030000e-14	93.5
159	TraesCS2D01G323400	chr5B	87.736	106	13	0	6203	6308	180025651	180025546	3.640000e-24	124.0
160	TraesCS2D01G323400	chr5B	77.000	200	38	6	9309	9506	1950877	1950684	3.660000e-19	108.0
161	TraesCS2D01G323400	chr5B	97.297	37	0	1	172	207	38699591	38699555	2.890000e-05	62.1
162	TraesCS2D01G323400	chr5B	91.111	45	2	2	167	211	36072221	36072179	1.040000e-04	60.2
163	TraesCS2D01G323400	chr5B	96.774	31	1	0	9169	9199	24640881	24640911	1.700000e-02	52.8

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS2D01G323400	chr2D	416389617	416399209	9592	True	17716.000000	17716	100.000000	1	9593	1	chr2D.!!$R2	9592
1	TraesCS2D01G323400	chr2D	414956786	414960214	3428	True	823.250000	1077	88.123250	1331	9170	4	chr2D.!!$R4	7839
2	TraesCS2D01G323400	chr5D	397830408	397834613	4205	False	7171.000000	7171	97.401000	2279	6498	1	chr5D.!!$F3	4219
3	TraesCS2D01G323400	chr5D	256738249	256742080	3831	False	6639.000000	6639	97.970000	2279	6104	1	chr5D.!!$F2	3825
4	TraesCS2D01G323400	chr6D	464435753	464439563	3810	True	6685.000000	6685	98.275000	2279	6104	1	chr6D.!!$R5	3825
5	TraesCS2D01G323400	chr6D	277122480	277125907	3427	False	4778.000000	4778	91.877000	2279	5705	1	chr6D.!!$F3	3426
6	TraesCS2D01G323400	chr6D	105058877	105063514	4637	True	3398.500000	6479	96.814500	2279	6857	2	chr6D.!!$R8	4578
7	TraesCS2D01G323400	chr6D	86936997	86939740	2743	True	1815.000000	3330	95.581000	4122	6857	2	chr6D.!!$R7	2735
8	TraesCS2D01G323400	chr7D	334831382	334835202	3820	False	6678.000000	6678	98.200000	2279	6104	1	chr7D.!!$F4	3825
9	TraesCS2D01G323400	chr7D	110931440	110935263	3823	False	6604.000000	6604	97.835000	2279	6104	1	chr7D.!!$F2	3825
10	TraesCS2D01G323400	chr7D	634962348	634966013	3665	False	6250.000000	6250	97.418000	2455	6126	1	chr7D.!!$F6	3671
11	TraesCS2D01G323400	chr1D	51928315	51932137	3822	False	6597.000000	6597	97.809000	2279	6104	1	chr1D.!!$F2	3825
12	TraesCS2D01G323400	chr1D	116473597	116477416	3819	False	6567.000000	6567	97.678000	2279	6104	1	chr1D.!!$F5	3825
13	TraesCS2D01G323400	chr1D	479723690	479725670	1980	True	3350.000000	3350	97.186000	4122	6104	1	chr1D.!!$R2	1982
14	TraesCS2D01G323400	chr1D	37444373	37445874	1501	False	1204.000000	2252	91.335000	4759	6308	2	chr1D.!!$F8	1549
15	TraesCS2D01G323400	chr3D	253387916	253391732	3816	True	6589.000000	6589	97.806000	2279	6101	1	chr3D.!!$R3	3822
16	TraesCS2D01G323400	chr3D	105446267	105449737	3470	True	4926.000000	4926	92.303000	2279	5755	1	chr3D.!!$R1	3476
17	TraesCS2D01G323400	chr3D	219562283	219565706	3423	False	4907.000000	4907	92.560000	2279	5705	1	chr3D.!!$F1	3426
18	TraesCS2D01G323400	chr3D	545056246	545058224	1978	True	3354.000000	3354	97.238000	4122	6104	1	chr3D.!!$R6	1982
19	TraesCS2D01G323400	chr3D	465776111	465776714	603	True	1029.000000	1029	97.227000	5493	6104	1	chr3D.!!$R4	611
20	TraesCS2D01G323400	chr4D	317191698	317195518	3820	True	6578.000000	6578	97.730000	2279	6104	1	chr4D.!!$R4	3825
21	TraesCS2D01G323400	chr4D	179851983	179855800	3817	True	6543.000000	6543	97.574000	2279	6104	1	chr4D.!!$R3	3825
22	TraesCS2D01G323400	chr4D	132675137	132676928	1791	False	2998.000000	2998	96.839000	4122	5918	1	chr4D.!!$F2	1796
23	TraesCS2D01G323400	chr4D	350494350	350495860	1510	True	2250.000000	2250	93.557000	4278	5791	1	chr4D.!!$R5	1513
24	TraesCS2D01G323400	chr4D	111600002	111601931	1929	True	1631.000000	3001	97.248000	4122	6104	2	chr4D.!!$R8	1982
25	TraesCS2D01G323400	chr2A	461017559	461021589	4030	True	4911.000000	4911	88.736000	2279	6308	1	chr2A.!!$R1	4029
26	TraesCS2D01G323400	chr2A	582634222	582637262	3040	True	796.200000	1448	91.565800	710	8289	5	chr2A.!!$R6	7579
27	TraesCS2D01G323400	chr2A	581942814	581945920	3106	True	596.600000	968	87.751000	1855	9194	5	chr2A.!!$R5	7339
28	TraesCS2D01G323400	chrUn	11178690	11182411	3721	False	4309.000000	4309	87.707000	2279	5989	1	chrUn.!!$F1	3710
29	TraesCS2D01G323400	chrUn	231453284	231457475	4191	False	2569.500000	4874	92.044500	2631	6866	2	chrUn.!!$F10	4235
30	TraesCS2D01G323400	chrUn	93039762	93041122	1360	False	2368.000000	2368	97.959000	4710	6081	1	chrUn.!!$F5	1371
31	TraesCS2D01G323400	chrUn	301209873	301213464	3591	True	2081.500000	3893	92.286000	3230	6866	2	chrUn.!!$R5	3636
32	TraesCS2D01G323400	chrUn	397271753	397273168	1415	True	1808.000000	1808	89.754000	4486	5904	1	chrUn.!!$R4	1418
33	TraesCS2D01G323400	chrUn	402808141	402809515	1374	True	635.000000	1002	94.362500	5511	6865	2	chrUn.!!$R6	1354
34	TraesCS2D01G323400	chr3A	550401866	550405217	3351	True	4569.000000	4569	91.325000	2282	5629	1	chr3A.!!$R3	3347
35	TraesCS2D01G323400	chr3A	353175243	353178502	3259	False	3906.000000	3906	88.352000	2284	5540	1	chr3A.!!$F2	3256
36	TraesCS2D01G323400	chr2B	440343478	440346890	3412	True	4438.000000	4438	90.148000	2279	5705	1	chr2B.!!$R2	3426
37	TraesCS2D01G323400	chr2B	488193543	488197942	4399	True	731.342857	1520	88.977286	1	9194	7	chr2B.!!$R3	9193
38	TraesCS2D01G323400	chr6A	34295722	34298797	3075	True	3855.000000	3855	89.394000	2684	5755	1	chr6A.!!$R1	3071
39	TraesCS2D01G323400	chr1A	373379987	373383120	3133	False	3323.000000	3323	85.873000	2643	5783	1	chr1A.!!$F1	3140

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
99	100	0.035152	CCTAAGTGCATGCCTCCACA	60.035	55.000	16.68	0.00	34.48	4.17	F
873	939	0.042535	GAGACTGATCTCGACTCGCG	60.043	60.000	0.00	0.00	42.09	5.87	F
1590	1779	0.179250	CGATGACGCCGTTTCTGTTG	60.179	55.000	0.00	0.00	0.00	3.33	F
2266	2499	0.038166	TACCCTGCTCCTTGCCTTTG	59.962	55.000	0.00	0.00	42.00	2.77	F
2268	2501	0.829182	CCCTGCTCCTTGCCTTTGTT	60.829	55.000	0.00	0.00	42.00	2.83	F
2269	2502	1.547675	CCCTGCTCCTTGCCTTTGTTA	60.548	52.381	0.00	0.00	42.00	2.41	F
4355	4652	1.015868	GGTAGAAGGGACGAGACTCG	58.984	60.000	22.97	22.97	46.93	4.18	F
4782	5085	0.252479	CTGCTCAGCAAGGACTCCAT	59.748	55.000	0.00	0.00	38.41	3.41	F
5894	6199	1.786937	CAGTAGCACTGGGAGAGGAT	58.213	55.000	8.03	0.00	42.35	3.24	F
6608	7703	1.144936	GTGATGAGGAGGCCTTCGG	59.855	63.158	6.77	0.00	31.76	4.30	F
8159	12261	0.250467	GAGTGAAAGTGCTCAGGCCA	60.250	55.000	5.01	0.00	37.74	5.36	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
1210	1277	0.951040	CTCCGCTGTCAGTCAAACCC	60.951	60.000	0.93	0.00	0.00	4.11	R
2153	2386	2.069465	ATCGCAGACCAGCTAGCTCG	62.069	60.000	16.15	11.74	42.51	5.03	R
2943	3190	5.299531	CGGTTCACTATAGTCATCTCCTTCA	59.700	44.000	1.26	0.00	0.00	3.02	R
4328	4625	3.793888	CCCTTCTACCCACGCCCC	61.794	72.222	0.00	0.00	0.00	5.80	R
4355	4652	2.974536	CTCTCGAGACGTGACTTTTGAC	59.025	50.000	12.08	0.00	0.00	3.18	R
4564	4861	4.347453	CTTTGCAGGGTGGCGTGC	62.347	66.667	0.00	0.00	40.29	5.34	R
6369	6700	0.745845	GTCCACTGGATCGCTGCATT	60.746	55.000	0.00	0.00	32.73	3.56	R
6520	7232	1.227089	CGAAGGCCTCCTCATCGTG	60.227	63.158	5.23	0.00	31.54	4.35	R
6857	7966	1.521681	CGGGAGGTCGATTGAAGGC	60.522	63.158	0.00	0.00	0.00	4.35	R
8212	12315	0.179176	CTGCGAGTCTGAAGACCTCG	60.179	60.000	19.22	19.22	45.85	4.63	R
9351	13635	0.035820	TTTCTGTCCCACATACGGGC	60.036	55.000	0.00	0.00	46.92	6.13	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
24	25	2.162608	TCCAACGGCCAAAAACATATCG	59.837	45.455	2.24	0.00	0.00	2.92
49	50	7.042456	CGATATGTTTGTCTTCAACCTCCTATG	60.042	40.741	0.00	0.00	32.93	2.23
59	60	1.006805	CCTCCTATGCTTCCTCGCG	60.007	63.158	0.00	0.00	0.00	5.87
99	100	0.035152	CCTAAGTGCATGCCTCCACA	60.035	55.000	16.68	0.00	34.48	4.17
101	102	0.399833	TAAGTGCATGCCTCCACACA	59.600	50.000	16.68	0.00	35.47	3.72
103	104	1.898094	GTGCATGCCTCCACACACA	60.898	57.895	16.68	0.00	32.92	3.72
104	105	1.898094	TGCATGCCTCCACACACAC	60.898	57.895	16.68	0.00	0.00	3.82
105	106	2.629656	GCATGCCTCCACACACACC	61.630	63.158	6.36	0.00	0.00	4.16
106	107	1.973281	CATGCCTCCACACACACCC	60.973	63.158	0.00	0.00	0.00	4.61
107	108	3.210012	ATGCCTCCACACACACCCC	62.210	63.158	0.00	0.00	0.00	4.95
108	109	3.570212	GCCTCCACACACACCCCT	61.570	66.667	0.00	0.00	0.00	4.79
109	110	2.750350	CCTCCACACACACCCCTC	59.250	66.667	0.00	0.00	0.00	4.30
110	111	2.750350	CTCCACACACACCCCTCC	59.250	66.667	0.00	0.00	0.00	4.30
111	112	2.852075	TCCACACACACCCCTCCC	60.852	66.667	0.00	0.00	0.00	4.30
112	113	3.966543	CCACACACACCCCTCCCC	61.967	72.222	0.00	0.00	0.00	4.81
113	114	3.966543	CACACACACCCCTCCCCC	61.967	72.222	0.00	0.00	0.00	5.40
154	155	3.414700	CACGCCGCTGAGTTGGTC	61.415	66.667	0.00	0.00	0.00	4.02
163	164	2.048503	GAGTTGGTCGTCACCCCG	60.049	66.667	0.00	0.00	42.99	5.73
264	268	1.901948	TCGCTCCTCACGTTGTCCT	60.902	57.895	0.00	0.00	0.00	3.85
266	270	1.666011	GCTCCTCACGTTGTCCTCA	59.334	57.895	0.00	0.00	0.00	3.86
267	271	0.389166	GCTCCTCACGTTGTCCTCAG	60.389	60.000	0.00	0.00	0.00	3.35
293	297	1.133253	CACGTGCTGCGAGGAATTG	59.867	57.895	0.82	0.00	44.77	2.32
296	300	1.016130	CGTGCTGCGAGGAATTGACT	61.016	55.000	0.00	0.00	44.77	3.41
299	303	1.065926	TGCTGCGAGGAATTGACTGAT	60.066	47.619	0.00	0.00	0.00	2.90
309	313	6.540438	AGGAATTGACTGATGCATGAAAAT	57.460	33.333	2.46	0.00	0.00	1.82
338	342	3.065371	GGCGTATGACAATTAGCAAAGCT	59.935	43.478	0.00	0.00	43.41	3.74
351	355	3.015327	AGCAAAGCTAGCAAGAGATTGG	58.985	45.455	18.83	0.00	36.99	3.16
370	374	2.964978	GCCACCAGCAATGTCACC	59.035	61.111	0.00	0.00	42.97	4.02
399	403	2.817258	TCTCTTGTGGGCATAAAAACCG	59.183	45.455	0.00	0.00	0.00	4.44
401	405	2.554893	TCTTGTGGGCATAAAAACCGAC	59.445	45.455	0.00	0.00	35.43	4.79
466	470	5.222079	TGTTAGTTCTGCATCTGGTTACA	57.778	39.130	0.00	0.00	0.00	2.41
481	485	7.406031	TCTGGTTACACAAATTTGGTTGTAA	57.594	32.000	21.47	21.47	39.73	2.41
482	486	8.012957	TCTGGTTACACAAATTTGGTTGTAAT	57.987	30.769	25.17	4.15	39.73	1.89
483	487	9.132923	TCTGGTTACACAAATTTGGTTGTAATA	57.867	29.630	25.17	19.19	39.73	0.98
535	585	2.768253	TGGTCTGTCCATGACACATC	57.232	50.000	0.00	0.00	41.93	3.06
536	586	2.259917	TGGTCTGTCCATGACACATCT	58.740	47.619	0.00	0.00	41.93	2.90
537	587	3.440127	TGGTCTGTCCATGACACATCTA	58.560	45.455	0.00	0.00	41.93	1.98
538	588	3.448660	TGGTCTGTCCATGACACATCTAG	59.551	47.826	0.00	0.00	41.93	2.43
539	589	3.701542	GGTCTGTCCATGACACATCTAGA	59.298	47.826	0.00	0.00	37.67	2.43
540	590	4.343526	GGTCTGTCCATGACACATCTAGAT	59.656	45.833	0.00	0.00	37.67	1.98
541	591	5.288015	GTCTGTCCATGACACATCTAGATG	58.712	45.833	27.63	27.63	44.15	2.90
542	592	5.068329	GTCTGTCCATGACACATCTAGATGA	59.932	44.000	34.16	15.79	38.07	2.92
543	593	5.301298	TCTGTCCATGACACATCTAGATGAG	59.699	44.000	34.16	28.70	38.07	2.90
544	594	4.202192	TGTCCATGACACATCTAGATGAGC	60.202	45.833	34.16	22.44	38.07	4.26
545	595	3.323115	TCCATGACACATCTAGATGAGCC	59.677	47.826	34.16	21.72	41.20	4.70
546	596	3.556633	CCATGACACATCTAGATGAGCCC	60.557	52.174	34.16	22.16	41.20	5.19
547	597	3.037851	TGACACATCTAGATGAGCCCT	57.962	47.619	34.16	14.30	41.20	5.19
548	598	4.184649	TGACACATCTAGATGAGCCCTA	57.815	45.455	34.16	14.90	41.20	3.53
549	599	4.148079	TGACACATCTAGATGAGCCCTAG	58.852	47.826	34.16	17.60	41.20	3.02
550	600	4.148838	GACACATCTAGATGAGCCCTAGT	58.851	47.826	34.16	20.01	41.20	2.57
551	601	4.551671	ACACATCTAGATGAGCCCTAGTT	58.448	43.478	34.16	9.92	41.20	2.24
552	602	5.706447	ACACATCTAGATGAGCCCTAGTTA	58.294	41.667	34.16	0.00	41.20	2.24
553	603	6.318913	ACACATCTAGATGAGCCCTAGTTAT	58.681	40.000	34.16	8.73	41.20	1.89
554	604	6.784969	ACACATCTAGATGAGCCCTAGTTATT	59.215	38.462	34.16	8.54	41.20	1.40
555	605	7.039363	ACACATCTAGATGAGCCCTAGTTATTC	60.039	40.741	34.16	0.00	41.20	1.75
556	606	7.178274	CACATCTAGATGAGCCCTAGTTATTCT	59.822	40.741	34.16	7.51	41.20	2.40
557	607	8.394822	ACATCTAGATGAGCCCTAGTTATTCTA	58.605	37.037	34.16	0.00	41.20	2.10
558	608	8.682710	CATCTAGATGAGCCCTAGTTATTCTAC	58.317	40.741	25.78	0.00	41.20	2.59
559	609	7.756614	TCTAGATGAGCCCTAGTTATTCTACA	58.243	38.462	0.00	0.00	36.06	2.74
560	610	8.394822	TCTAGATGAGCCCTAGTTATTCTACAT	58.605	37.037	0.00	0.00	36.06	2.29
561	611	7.475137	AGATGAGCCCTAGTTATTCTACATC	57.525	40.000	0.00	0.00	32.27	3.06
562	612	7.245292	AGATGAGCCCTAGTTATTCTACATCT	58.755	38.462	0.00	0.00	35.02	2.90
563	613	8.394822	AGATGAGCCCTAGTTATTCTACATCTA	58.605	37.037	0.00	0.00	36.55	1.98
564	614	8.958060	ATGAGCCCTAGTTATTCTACATCTAA	57.042	34.615	0.00	0.00	0.00	2.10
565	615	8.410673	TGAGCCCTAGTTATTCTACATCTAAG	57.589	38.462	0.00	0.00	0.00	2.18
566	616	8.005388	TGAGCCCTAGTTATTCTACATCTAAGT	58.995	37.037	0.00	0.00	0.00	2.24
567	617	8.184304	AGCCCTAGTTATTCTACATCTAAGTG	57.816	38.462	0.00	0.00	0.00	3.16
568	618	6.869388	GCCCTAGTTATTCTACATCTAAGTGC	59.131	42.308	0.00	0.00	0.00	4.40
569	619	7.256012	GCCCTAGTTATTCTACATCTAAGTGCT	60.256	40.741	0.00	0.00	0.00	4.40
570	620	8.301002	CCCTAGTTATTCTACATCTAAGTGCTC	58.699	40.741	0.00	0.00	0.00	4.26
571	621	8.851145	CCTAGTTATTCTACATCTAAGTGCTCA	58.149	37.037	0.00	0.00	0.00	4.26
574	624	9.757227	AGTTATTCTACATCTAAGTGCTCAATC	57.243	33.333	0.00	0.00	0.00	2.67
575	625	9.534565	GTTATTCTACATCTAAGTGCTCAATCA	57.465	33.333	0.00	0.00	0.00	2.57
578	628	7.834068	TCTACATCTAAGTGCTCAATCAAAC	57.166	36.000	0.00	0.00	0.00	2.93
579	629	7.615403	TCTACATCTAAGTGCTCAATCAAACT	58.385	34.615	0.00	0.00	0.00	2.66
580	630	8.749354	TCTACATCTAAGTGCTCAATCAAACTA	58.251	33.333	0.00	0.00	0.00	2.24
581	631	7.840342	ACATCTAAGTGCTCAATCAAACTAG	57.160	36.000	0.00	0.00	0.00	2.57
582	632	7.615403	ACATCTAAGTGCTCAATCAAACTAGA	58.385	34.615	0.00	0.00	0.00	2.43
583	633	8.097038	ACATCTAAGTGCTCAATCAAACTAGAA	58.903	33.333	0.00	0.00	0.00	2.10
584	634	8.939929	CATCTAAGTGCTCAATCAAACTAGAAA	58.060	33.333	0.00	0.00	0.00	2.52
585	635	8.539770	TCTAAGTGCTCAATCAAACTAGAAAG	57.460	34.615	0.00	0.00	0.00	2.62
586	636	8.367911	TCTAAGTGCTCAATCAAACTAGAAAGA	58.632	33.333	0.00	0.00	0.00	2.52
587	637	7.807977	AAGTGCTCAATCAAACTAGAAAGAA	57.192	32.000	0.00	0.00	0.00	2.52
588	638	7.807977	AGTGCTCAATCAAACTAGAAAGAAA	57.192	32.000	0.00	0.00	0.00	2.52
589	639	8.225603	AGTGCTCAATCAAACTAGAAAGAAAA	57.774	30.769	0.00	0.00	0.00	2.29
590	640	8.686334	AGTGCTCAATCAAACTAGAAAGAAAAA	58.314	29.630	0.00	0.00	0.00	1.94
591	641	8.962111	GTGCTCAATCAAACTAGAAAGAAAAAG	58.038	33.333	0.00	0.00	0.00	2.27
592	642	8.902806	TGCTCAATCAAACTAGAAAGAAAAAGA	58.097	29.630	0.00	0.00	0.00	2.52
593	643	9.736023	GCTCAATCAAACTAGAAAGAAAAAGAA	57.264	29.630	0.00	0.00	0.00	2.52
627	677	7.775729	AAAAACGCTTACACGAATCTTAATG	57.224	32.000	0.00	0.00	36.70	1.90
628	678	6.476243	AAACGCTTACACGAATCTTAATGT	57.524	33.333	0.00	0.00	36.70	2.71
629	679	7.585286	AAACGCTTACACGAATCTTAATGTA	57.415	32.000	0.00	0.00	36.70	2.29
630	680	7.585286	AACGCTTACACGAATCTTAATGTAA	57.415	32.000	0.00	0.00	36.40	2.41
631	681	7.585286	ACGCTTACACGAATCTTAATGTAAA	57.415	32.000	0.00	0.00	37.15	2.01
632	682	8.020861	ACGCTTACACGAATCTTAATGTAAAA	57.979	30.769	0.00	0.00	37.15	1.52
633	683	8.662141	ACGCTTACACGAATCTTAATGTAAAAT	58.338	29.630	0.00	0.00	37.15	1.82
634	684	9.485591	CGCTTACACGAATCTTAATGTAAAATT	57.514	29.630	0.00	0.00	37.15	1.82
669	719	6.867662	ACTTGGATGTGCAATACTTATAGC	57.132	37.500	0.00	0.00	0.00	2.97
670	720	6.356556	ACTTGGATGTGCAATACTTATAGCA	58.643	36.000	0.00	0.00	34.10	3.49
681	731	8.925700	TGCAATACTTATAGCACATTTAGATCG	58.074	33.333	0.00	0.00	31.05	3.69
682	732	8.926710	GCAATACTTATAGCACATTTAGATCGT	58.073	33.333	0.00	0.00	0.00	3.73
749	799	5.238624	TCATTTGGCATTGGAAATTTGGA	57.761	34.783	0.00	0.00	0.00	3.53
750	800	5.628130	TCATTTGGCATTGGAAATTTGGAA	58.372	33.333	0.00	0.00	0.00	3.53
764	814	7.111466	GGAAATTTGGAATCATGGAATTGGAA	58.889	34.615	0.00	0.00	0.00	3.53
798	848	0.308376	TTTTGTTGTTCGGCCGCTAC	59.692	50.000	23.51	21.02	0.00	3.58
801	851	1.743995	GTTGTTCGGCCGCTACCAT	60.744	57.895	23.51	0.00	0.00	3.55
820	870	0.387929	TCGGGATCAGTATTGCCGAC	59.612	55.000	2.06	0.00	33.44	4.79
872	938	3.817960	GAGACTGATCTCGACTCGC	57.182	57.895	0.00	0.00	42.09	5.03
873	939	0.042535	GAGACTGATCTCGACTCGCG	60.043	60.000	0.00	0.00	42.09	5.87
908	974	0.249447	TGATAGGCATTCTCACCGCG	60.249	55.000	0.00	0.00	0.00	6.46
931	997	1.490490	TGATTCCCCCTCTCCATTTCG	59.510	52.381	0.00	0.00	0.00	3.46
989	1056	1.420430	TTCTAGCCCTAATCCCCACG	58.580	55.000	0.00	0.00	0.00	4.94
1107	1174	4.156622	CGACGTCTCCGCGTGCTA	62.157	66.667	14.70	0.00	45.79	3.49
1188	1255	1.757118	CCAGGTATCGAGCCTCTGAAA	59.243	52.381	8.21	0.00	33.31	2.69
1305	1481	3.839432	CGAGTTCGCTCCCCTCCC	61.839	72.222	0.00	0.00	41.09	4.30
1306	1482	3.471806	GAGTTCGCTCCCCTCCCC	61.472	72.222	0.00	0.00	38.28	4.81
1307	1483	3.986116	GAGTTCGCTCCCCTCCCCT	62.986	68.421	0.00	0.00	38.28	4.79
1308	1484	3.471806	GTTCGCTCCCCTCCCCTC	61.472	72.222	0.00	0.00	0.00	4.30
1345	1523	3.512680	CCTACAAAACTCGCTCGAATCT	58.487	45.455	0.00	0.00	0.00	2.40
1349	1527	3.430218	ACAAAACTCGCTCGAATCTTGAG	59.570	43.478	11.35	0.00	36.53	3.02
1356	1534	3.264897	CGAATCTTGAGCCCGCCG	61.265	66.667	0.00	0.00	0.00	6.46
1357	1535	2.186903	GAATCTTGAGCCCGCCGA	59.813	61.111	0.00	0.00	0.00	5.54
1358	1536	2.125106	AATCTTGAGCCCGCCGAC	60.125	61.111	0.00	0.00	0.00	4.79
1376	1561	2.641746	CCCTCTCTCTCCCCCACCT	61.642	68.421	0.00	0.00	0.00	4.00
1417	1602	2.137523	GAACCTCGTTTTGCCGTCTAA	58.862	47.619	0.00	0.00	0.00	2.10
1551	1740	1.002134	CCCTCGCACACATCCCTTT	60.002	57.895	0.00	0.00	0.00	3.11
1552	1741	1.308069	CCCTCGCACACATCCCTTTG	61.308	60.000	0.00	0.00	0.00	2.77
1553	1742	1.503542	CTCGCACACATCCCTTTGC	59.496	57.895	0.00	0.00	0.00	3.68
1554	1743	0.957395	CTCGCACACATCCCTTTGCT	60.957	55.000	0.00	0.00	32.56	3.91
1557	1746	1.251251	GCACACATCCCTTTGCTCTT	58.749	50.000	0.00	0.00	32.00	2.85
1559	1748	1.815003	CACACATCCCTTTGCTCTTCC	59.185	52.381	0.00	0.00	0.00	3.46
1560	1749	1.707427	ACACATCCCTTTGCTCTTCCT	59.293	47.619	0.00	0.00	0.00	3.36
1562	1751	1.283321	ACATCCCTTTGCTCTTCCTCC	59.717	52.381	0.00	0.00	0.00	4.30
1590	1779	0.179250	CGATGACGCCGTTTCTGTTG	60.179	55.000	0.00	0.00	0.00	3.33
1648	1853	2.048503	CCACCAGGTTCGTCCGAC	60.049	66.667	0.00	0.00	41.99	4.79
1654	1859	2.679287	GGTTCGTCCGACTCCCCT	60.679	66.667	0.00	0.00	0.00	4.79
1659	1864	2.979649	GTCCGACTCCCCTGTTCC	59.020	66.667	0.00	0.00	0.00	3.62
1660	1865	1.911766	GTCCGACTCCCCTGTTCCA	60.912	63.158	0.00	0.00	0.00	3.53
1671	1879	2.037121	CCCCTGTTCCATTTGTTTGGAC	59.963	50.000	0.00	0.00	45.42	4.02
1712	1920	1.713597	GTGCTGATCGATGTGTGTGA	58.286	50.000	0.54	0.00	0.00	3.58
1713	1921	2.068519	GTGCTGATCGATGTGTGTGAA	58.931	47.619	0.54	0.00	0.00	3.18
1954	2184	0.947244	CTCGTGCTTGGCTTTCTGTT	59.053	50.000	0.00	0.00	0.00	3.16
1986	2216	5.050567	ACAACCGTATTCTTCTTTCGACAAC	60.051	40.000	0.00	0.00	0.00	3.32
2090	2320	5.684704	TCCAAGTGGATTTTAGCCATAGAG	58.315	41.667	0.00	0.00	39.78	2.43
2153	2386	2.531206	GTCGAGCACTCTGGTACAATC	58.469	52.381	0.00	0.00	38.70	2.67
2171	2404	2.765356	CGAGCTAGCTGGTCTGCGA	61.765	63.158	24.99	0.00	40.75	5.10
2174	2407	0.754957	AGCTAGCTGGTCTGCGATCT	60.755	55.000	18.57	0.00	38.13	2.75
2265	2498	0.777446	TTACCCTGCTCCTTGCCTTT	59.223	50.000	0.00	0.00	42.00	3.11
2266	2499	0.038166	TACCCTGCTCCTTGCCTTTG	59.962	55.000	0.00	0.00	42.00	2.77
2267	2500	1.228675	CCCTGCTCCTTGCCTTTGT	60.229	57.895	0.00	0.00	42.00	2.83
2268	2501	0.829182	CCCTGCTCCTTGCCTTTGTT	60.829	55.000	0.00	0.00	42.00	2.83
2269	2502	1.547675	CCCTGCTCCTTGCCTTTGTTA	60.548	52.381	0.00	0.00	42.00	2.41
2270	2503	1.815003	CCTGCTCCTTGCCTTTGTTAG	59.185	52.381	0.00	0.00	42.00	2.34
4355	4652	1.015868	GGTAGAAGGGACGAGACTCG	58.984	60.000	22.97	22.97	46.93	4.18
4564	4861	3.423645	GGAGAACGATCAAAAAGACGCTG	60.424	47.826	0.00	0.00	0.00	5.18
4565	4862	2.096218	AGAACGATCAAAAAGACGCTGC	60.096	45.455	0.00	0.00	0.00	5.25
4679	4982	1.215244	CGATCATCATTGCACGAGCT	58.785	50.000	6.36	0.00	42.74	4.09
4782	5085	0.252479	CTGCTCAGCAAGGACTCCAT	59.748	55.000	0.00	0.00	38.41	3.41
4805	5108	5.532557	TGCAACATCTTGGAGATATACTCG	58.467	41.667	0.00	0.00	45.76	4.18
5062	5367	8.871629	ATAGTGTCACTATGAGGATAAGGTAG	57.128	38.462	22.14	0.00	39.76	3.18
5464	5769	6.684686	CAACATCAGGAACATGAAAAGATGT	58.315	36.000	0.00	9.39	44.41	3.06
5572	5877	5.191426	AGAAGACAAGGTGGATGAATCATG	58.809	41.667	0.00	0.00	0.00	3.07
5573	5878	4.849813	AGACAAGGTGGATGAATCATGA	57.150	40.909	0.00	0.00	0.00	3.07
5574	5879	4.778579	AGACAAGGTGGATGAATCATGAG	58.221	43.478	0.00	0.00	0.00	2.90
5575	5880	4.226846	AGACAAGGTGGATGAATCATGAGT	59.773	41.667	0.00	0.00	0.00	3.41
5576	5881	4.521146	ACAAGGTGGATGAATCATGAGTC	58.479	43.478	16.08	16.08	0.00	3.36
5577	5882	4.019051	ACAAGGTGGATGAATCATGAGTCA	60.019	41.667	26.33	26.33	39.86	3.41
5579	5884	6.126681	ACAAGGTGGATGAATCATGAGTCATA	60.127	38.462	32.14	18.89	44.89	2.15
5580	5885	6.699242	AGGTGGATGAATCATGAGTCATAT	57.301	37.500	32.14	17.34	44.89	1.78
5894	6199	1.786937	CAGTAGCACTGGGAGAGGAT	58.213	55.000	8.03	0.00	42.35	3.24
5898	6203	2.060980	GCACTGGGAGAGGATCGGT	61.061	63.158	0.00	0.00	42.67	4.69
6389	6720	2.512515	GCAGCGATCCAGTGGACC	60.513	66.667	15.86	2.75	32.98	4.46
6535	7604	3.842923	CGCACGATGAGGAGGCCT	61.843	66.667	3.86	3.86	36.03	5.19
6536	7605	2.586792	GCACGATGAGGAGGCCTT	59.413	61.111	6.77	0.00	31.76	4.35
6604	7699	3.842923	CGCGTGATGAGGAGGCCT	61.843	66.667	3.86	3.86	36.03	5.19
6605	7700	2.586792	GCGTGATGAGGAGGCCTT	59.413	61.111	6.77	0.00	31.76	4.35
6606	7701	1.522580	GCGTGATGAGGAGGCCTTC	60.523	63.158	6.77	3.97	31.76	3.46
6607	7702	1.227089	CGTGATGAGGAGGCCTTCG	60.227	63.158	6.77	0.00	31.76	3.79
6608	7703	1.144936	GTGATGAGGAGGCCTTCGG	59.855	63.158	6.77	0.00	31.76	4.30
6750	7857	3.010584	AGCAACTTGTATTCCCATGAGGT	59.989	43.478	0.00	0.00	36.75	3.85
6756	7863	5.905331	ACTTGTATTCCCATGAGGTCATAGA	59.095	40.000	0.00	0.00	34.26	1.98
6874	7983	0.462759	CAGCCTTCAATCGACCTCCC	60.463	60.000	0.00	0.00	0.00	4.30
6906	10185	1.059584	TCACCTGTGCTTCCCTGGAA	61.060	55.000	0.00	0.00	0.00	3.53
6916	10195	3.053395	TGCTTCCCTGGAAATGATAGCTT	60.053	43.478	0.00	0.00	33.34	3.74
6917	10196	3.956848	GCTTCCCTGGAAATGATAGCTTT	59.043	43.478	0.00	0.00	33.34	3.51
6918	10197	5.133221	GCTTCCCTGGAAATGATAGCTTTA	58.867	41.667	0.00	0.00	33.34	1.85
6919	10198	5.240403	GCTTCCCTGGAAATGATAGCTTTAG	59.760	44.000	0.00	0.00	33.34	1.85
6957	10236	8.143193	AGTCAGCTCAGTCTCATAATTTGATAG	58.857	37.037	0.00	0.00	32.72	2.08
6958	10237	7.925483	GTCAGCTCAGTCTCATAATTTGATAGT	59.075	37.037	0.00	0.00	32.72	2.12
6959	10238	9.136323	TCAGCTCAGTCTCATAATTTGATAGTA	57.864	33.333	0.00	0.00	32.72	1.82
6960	10239	9.190858	CAGCTCAGTCTCATAATTTGATAGTAC	57.809	37.037	0.00	0.00	32.72	2.73
7023	10313	4.634443	ACCGGCAGTGAATAAAATGTACTC	59.366	41.667	0.00	0.00	0.00	2.59
7035	10326	9.606631	GAATAAAATGTACTCAAGGATCTCACT	57.393	33.333	0.00	0.00	0.00	3.41
7049	10340	3.616956	TCTCACTCTTGATTTCGGCAT	57.383	42.857	0.00	0.00	0.00	4.40
7142	10434	4.381932	CCCTTGGAATTATGGTTCAACAGC	60.382	45.833	0.00	0.00	0.00	4.40
7297	11012	7.676683	ACACCAGTATGACATACTTCCTATT	57.323	36.000	22.84	5.62	43.27	1.73
7456	11339	6.344500	CAGTGATGTGCTTAGGAGAACTATT	58.656	40.000	0.00	0.00	32.14	1.73
7591	11666	6.834168	TTTTCAAACTCCTTTGTCTCTGTT	57.166	33.333	0.00	0.00	38.38	3.16
7629	11704	1.227793	GATAGGCCTGCTGTGCTCC	60.228	63.158	17.99	0.00	0.00	4.70
7653	11728	8.424918	TCCAATATTTCAGTCAGTTCTCTATCC	58.575	37.037	0.00	0.00	0.00	2.59
7866	11951	6.755206	TGTTGAATGCTATAATAGTACCGCT	58.245	36.000	0.00	0.00	0.00	5.52
8054	12152	6.465948	TGTTGATGCCTTGATTTTTATGCTT	58.534	32.000	0.00	0.00	0.00	3.91
8159	12261	0.250467	GAGTGAAAGTGCTCAGGCCA	60.250	55.000	5.01	0.00	37.74	5.36
8212	12315	0.458669	CAGGATGCTTGCCAATGTCC	59.541	55.000	0.00	0.00	0.00	4.02
8295	12398	2.694109	GCGGTTGAAGTAGAGAGGGTAT	59.306	50.000	0.00	0.00	0.00	2.73
8296	12399	3.491104	GCGGTTGAAGTAGAGAGGGTATG	60.491	52.174	0.00	0.00	0.00	2.39
8305	12408	6.019656	AGTAGAGAGGGTATGACATCTCAA	57.980	41.667	13.27	0.00	40.53	3.02
8316	12419	4.397481	TGACATCTCAATGCTAGAGTGG	57.603	45.455	0.00	0.00	36.26	4.00
8321	12424	5.658634	ACATCTCAATGCTAGAGTGGTTCTA	59.341	40.000	0.00	0.00	35.43	2.10
8368	12605	3.913799	TGGGGAATGTACTTTCCTTGAGA	59.086	43.478	29.53	13.46	43.94	3.27
8375	12613	7.095017	GGAATGTACTTTCCTTGAGAGAAACTG	60.095	40.741	25.86	0.00	41.69	3.16
8387	12625	7.065563	CCTTGAGAGAAACTGGTATCTGAATTG	59.934	40.741	0.00	0.00	0.00	2.32
8393	12631	7.918076	AGAAACTGGTATCTGAATTGTCCTTA	58.082	34.615	0.00	0.00	0.00	2.69
8401	12639	7.654116	GGTATCTGAATTGTCCTTAAGAGTAGC	59.346	40.741	3.36	0.00	0.00	3.58
8432	12678	5.463286	TGTTGCTGAAAATGCTATCACTTG	58.537	37.500	0.00	0.00	0.00	3.16
8435	12681	3.119388	GCTGAAAATGCTATCACTTGGCA	60.119	43.478	0.00	0.00	40.32	4.92
8464	12710	2.224769	TGTCATCCAAAGAACCCTGGTC	60.225	50.000	0.00	0.00	34.11	4.02
8512	12761	9.267096	GCTTCTAGAAATTACTTGAATTGAACG	57.733	33.333	6.63	0.00	37.82	3.95
8531	12780	7.667043	TGAACGAAGTACTTGCTATTTCATT	57.333	32.000	14.14	0.00	45.00	2.57
8541	12790	9.937175	GTACTTGCTATTTCATTGATAAAGACC	57.063	33.333	0.00	0.00	0.00	3.85
8571	12825	3.144506	CTCATCATGGGGCATTGAGTAC	58.855	50.000	0.00	0.00	29.28	2.73
8714	12968	1.133025	GTGGTCTGTGCATTGTATGGC	59.867	52.381	0.00	0.00	0.00	4.40
8725	12979	4.240096	GCATTGTATGGCCTGCAATATTC	58.760	43.478	15.80	7.97	38.00	1.75
8729	12983	4.989277	TGTATGGCCTGCAATATTCATCT	58.011	39.130	3.32	0.00	0.00	2.90
8764	13018	4.955811	TGTATTCTTGACCACTCACACT	57.044	40.909	0.00	0.00	0.00	3.55
8780	13036	1.171308	CACTCTGATTGGCACCAAGG	58.829	55.000	8.30	1.51	39.47	3.61
8786	13042	5.311649	ACTCTGATTGGCACCAAGGATATAT	59.688	40.000	8.30	0.00	39.47	0.86
8787	13043	6.501805	ACTCTGATTGGCACCAAGGATATATA	59.498	38.462	8.30	0.00	39.47	0.86
8788	13044	7.017551	ACTCTGATTGGCACCAAGGATATATAA	59.982	37.037	8.30	0.00	39.47	0.98
8789	13045	7.754624	TCTGATTGGCACCAAGGATATATAAA	58.245	34.615	8.30	0.00	39.47	1.40
8830	13086	5.253330	ACCATGATGTCCAACGAAAATACT	58.747	37.500	0.00	0.00	0.00	2.12
8842	13098	5.366829	ACGAAAATACTACCCACAAAAGC	57.633	39.130	0.00	0.00	0.00	3.51
8881	13140	4.508551	AGTAGTTCATGCCATCATCCAA	57.491	40.909	0.00	0.00	0.00	3.53
8893	13152	0.975556	TCATCCAACTAGGCTCGGCA	60.976	55.000	0.00	0.00	37.29	5.69
8912	13171	2.417933	GCACGCAGATCACAATCTCTTT	59.582	45.455	0.00	0.00	40.38	2.52
8913	13172	3.727079	GCACGCAGATCACAATCTCTTTG	60.727	47.826	0.00	0.00	40.38	2.77
8951	13210	8.946085	GTTTGTGTGGATAACTCTGATAATGAA	58.054	33.333	0.00	0.00	0.00	2.57
8953	13212	8.893219	TGTGTGGATAACTCTGATAATGAATC	57.107	34.615	0.00	0.00	34.93	2.52
8957	13235	8.778358	GTGGATAACTCTGATAATGAATCAACC	58.222	37.037	0.00	0.00	44.05	3.77
8967	13245	9.511272	CTGATAATGAATCAACCCTGATAATGA	57.489	33.333	0.00	0.00	44.05	2.57
9018	13296	4.020928	TGCAATTGCCATCAGAAGTTCAAT	60.021	37.500	26.94	0.00	41.18	2.57
9019	13297	4.933400	GCAATTGCCATCAGAAGTTCAATT	59.067	37.500	20.06	0.00	35.34	2.32
9067	13345	8.035984	TCCGTTTATGGTTCAAACTTTTCTTTT	58.964	29.630	0.00	0.00	34.43	2.27
9094	13372	8.206189	TGAGTTGATCATGCATGTTTAGATAGA	58.794	33.333	25.43	3.97	31.12	1.98
9095	13373	8.375608	AGTTGATCATGCATGTTTAGATAGAC	57.624	34.615	25.43	12.59	0.00	2.59
9097	13375	8.615211	GTTGATCATGCATGTTTAGATAGACAA	58.385	33.333	25.43	12.07	0.00	3.18
9098	13376	8.913487	TGATCATGCATGTTTAGATAGACAAT	57.087	30.769	25.43	7.43	0.00	2.71
9187	13471	8.410030	CGATAGTATACTAGTAGAATGCTCGT	57.590	38.462	17.31	0.00	30.70	4.18
9188	13472	8.322428	CGATAGTATACTAGTAGAATGCTCGTG	58.678	40.741	17.31	1.20	28.26	4.35
9189	13473	6.243811	AGTATACTAGTAGAATGCTCGTGC	57.756	41.667	2.75	1.71	40.20	5.34
9190	13474	2.476873	ACTAGTAGAATGCTCGTGCG	57.523	50.000	3.59	0.00	43.34	5.34
9196	13480	4.277239	AATGCTCGTGCGTTGCTA	57.723	50.000	15.59	0.00	45.65	3.49
9197	13481	1.787847	AATGCTCGTGCGTTGCTAC	59.212	52.632	15.59	0.00	45.65	3.58
9211	13495	4.600012	GTTGCTACGAGTTACAATGCAT	57.400	40.909	0.00	0.00	0.00	3.96
9212	13496	5.712217	GTTGCTACGAGTTACAATGCATA	57.288	39.130	0.00	0.00	0.00	3.14
9213	13497	6.102006	GTTGCTACGAGTTACAATGCATAA	57.898	37.500	0.00	0.00	0.00	1.90
9214	13498	6.539324	GTTGCTACGAGTTACAATGCATAAA	58.461	36.000	0.00	0.00	0.00	1.40
9215	13499	6.729391	TGCTACGAGTTACAATGCATAAAA	57.271	33.333	0.00	0.00	0.00	1.52
9216	13500	7.135089	TGCTACGAGTTACAATGCATAAAAA	57.865	32.000	0.00	0.00	0.00	1.94
9252	13536	9.449719	ACAAATTAATAAGATCGTCTTCAAGGT	57.550	29.630	3.94	0.00	37.89	3.50
9253	13537	9.708222	CAAATTAATAAGATCGTCTTCAAGGTG	57.292	33.333	3.94	0.00	37.89	4.00
9254	13538	9.667107	AAATTAATAAGATCGTCTTCAAGGTGA	57.333	29.630	3.94	0.00	37.89	4.02
9255	13539	9.667107	AATTAATAAGATCGTCTTCAAGGTGAA	57.333	29.630	3.94	0.00	37.89	3.18
9256	13540	6.969828	AATAAGATCGTCTTCAAGGTGAAC	57.030	37.500	3.94	0.00	37.89	3.18
9257	13541	3.320673	AGATCGTCTTCAAGGTGAACC	57.679	47.619	0.00	0.00	32.21	3.62
9258	13542	3.325135	AAGATCGTCTTCAAGGTGAACCT	59.675	43.478	0.00	0.00	39.38	3.50
9259	13543	5.011738	TAAGATCGTCTTCAAGGTGAACCTT	59.988	40.000	8.99	8.99	45.72	3.50
9260	13544	6.209986	TAAGATCGTCTTCAAGGTGAACCTTA	59.790	38.462	14.29	0.00	44.45	2.69
9261	13545	7.093465	TAAGATCGTCTTCAAGGTGAACCTTAT	60.093	37.037	14.29	3.06	44.45	1.73
9275	13559	8.971073	AGGTGAACCTTATTTTTCTTCCATATG	58.029	33.333	0.00	0.00	46.09	1.78
9276	13560	8.749354	GGTGAACCTTATTTTTCTTCCATATGT	58.251	33.333	1.24	0.00	0.00	2.29
9277	13561	9.788960	GTGAACCTTATTTTTCTTCCATATGTC	57.211	33.333	1.24	0.00	0.00	3.06
9278	13562	8.966868	TGAACCTTATTTTTCTTCCATATGTCC	58.033	33.333	1.24	0.00	0.00	4.02
9279	13563	7.568199	ACCTTATTTTTCTTCCATATGTCCG	57.432	36.000	1.24	0.00	0.00	4.79
9280	13564	6.546034	ACCTTATTTTTCTTCCATATGTCCGG	59.454	38.462	0.00	0.00	0.00	5.14
9281	13565	6.016276	CCTTATTTTTCTTCCATATGTCCGGG	60.016	42.308	0.00	0.00	0.00	5.73
9282	13566	2.341846	TTTCTTCCATATGTCCGGGC	57.658	50.000	0.00	0.00	0.00	6.13
9283	13567	1.208706	TTCTTCCATATGTCCGGGCA	58.791	50.000	13.22	13.22	0.00	5.36
9284	13568	1.434188	TCTTCCATATGTCCGGGCAT	58.566	50.000	27.21	27.21	0.00	4.40
9285	13569	1.072173	TCTTCCATATGTCCGGGCATG	59.928	52.381	31.57	17.39	0.00	4.06
9286	13570	0.843309	TTCCATATGTCCGGGCATGT	59.157	50.000	31.57	22.88	0.00	3.21
9287	13571	0.843309	TCCATATGTCCGGGCATGTT	59.157	50.000	31.57	15.85	0.00	2.71
9288	13572	1.202758	TCCATATGTCCGGGCATGTTC	60.203	52.381	31.57	0.00	0.00	3.18
9289	13573	0.867746	CATATGTCCGGGCATGTTCG	59.132	55.000	31.57	10.28	0.00	3.95
9290	13574	0.250295	ATATGTCCGGGCATGTTCGG	60.250	55.000	31.57	18.47	46.89	4.30
9295	13579	3.409856	CGGGCATGTTCGGACATC	58.590	61.111	6.29	2.06	44.55	3.06
9296	13580	1.449423	CGGGCATGTTCGGACATCA	60.449	57.895	6.29	0.00	44.55	3.07
9297	13581	1.024046	CGGGCATGTTCGGACATCAA	61.024	55.000	6.29	0.00	44.55	2.57
9298	13582	1.173043	GGGCATGTTCGGACATCAAA	58.827	50.000	6.29	0.00	44.55	2.69
9299	13583	1.135402	GGGCATGTTCGGACATCAAAC	60.135	52.381	6.29	0.00	44.55	2.93
9300	13584	1.465689	GGCATGTTCGGACATCAAACG	60.466	52.381	6.29	0.00	44.55	3.60
9301	13585	1.465689	GCATGTTCGGACATCAAACGG	60.466	52.381	6.29	0.00	44.55	4.44
9302	13586	1.130373	CATGTTCGGACATCAAACGGG	59.870	52.381	6.29	0.00	44.55	5.28
9303	13587	1.231958	TGTTCGGACATCAAACGGGC	61.232	55.000	0.00	0.00	0.00	6.13
9304	13588	2.030401	TTCGGACATCAAACGGGCG	61.030	57.895	0.00	0.00	0.00	6.13
9305	13589	2.718747	TTCGGACATCAAACGGGCGT	62.719	55.000	0.00	0.00	0.00	5.68
9306	13590	2.736682	CGGACATCAAACGGGCGTC	61.737	63.158	0.00	0.00	0.00	5.19
9307	13591	2.736682	GGACATCAAACGGGCGTCG	61.737	63.158	0.00	0.00	45.88	5.12
9308	13592	3.362851	GACATCAAACGGGCGTCGC	62.363	63.158	9.22	9.22	43.89	5.19
9318	13602	2.958576	GGCGTCGCCCAAAATTCA	59.041	55.556	26.23	0.00	44.06	2.57
9319	13603	1.287503	GGCGTCGCCCAAAATTCAA	59.712	52.632	26.23	0.00	44.06	2.69
9320	13604	1.006825	GGCGTCGCCCAAAATTCAAC	61.007	55.000	26.23	0.00	44.06	3.18
9321	13605	1.006825	GCGTCGCCCAAAATTCAACC	61.007	55.000	5.75	0.00	0.00	3.77
9322	13606	0.312416	CGTCGCCCAAAATTCAACCA	59.688	50.000	0.00	0.00	0.00	3.67
9323	13607	1.067915	CGTCGCCCAAAATTCAACCAT	60.068	47.619	0.00	0.00	0.00	3.55
9324	13608	2.606108	GTCGCCCAAAATTCAACCATC	58.394	47.619	0.00	0.00	0.00	3.51
9325	13609	1.548269	TCGCCCAAAATTCAACCATCC	59.452	47.619	0.00	0.00	0.00	3.51
9326	13610	1.735369	CGCCCAAAATTCAACCATCCG	60.735	52.381	0.00	0.00	0.00	4.18
9327	13611	1.405391	GCCCAAAATTCAACCATCCGG	60.405	52.381	0.00	0.00	38.77	5.14
9328	13612	2.175202	CCCAAAATTCAACCATCCGGA	58.825	47.619	6.61	6.61	35.59	5.14
9329	13613	2.094234	CCCAAAATTCAACCATCCGGAC	60.094	50.000	6.12	0.00	35.59	4.79
9330	13614	2.560542	CCAAAATTCAACCATCCGGACA	59.439	45.455	6.12	0.00	35.59	4.02
9331	13615	3.195396	CCAAAATTCAACCATCCGGACAT	59.805	43.478	6.12	0.00	35.59	3.06
9332	13616	4.322650	CCAAAATTCAACCATCCGGACATT	60.323	41.667	6.12	0.00	35.59	2.71
9333	13617	5.237048	CAAAATTCAACCATCCGGACATTT	58.763	37.500	6.12	0.00	35.59	2.32
9334	13618	4.718940	AATTCAACCATCCGGACATTTC	57.281	40.909	6.12	0.00	35.59	2.17
9335	13619	1.732941	TCAACCATCCGGACATTTCG	58.267	50.000	6.12	0.00	35.59	3.46
9337	13621	0.393808	AACCATCCGGACATTTCGGG	60.394	55.000	6.12	2.35	46.78	5.14
9338	13622	2.186826	CCATCCGGACATTTCGGGC	61.187	63.158	6.12	0.00	46.78	6.13
9339	13623	1.153168	CATCCGGACATTTCGGGCT	60.153	57.895	6.12	0.00	46.78	5.19
9340	13624	0.748005	CATCCGGACATTTCGGGCTT	60.748	55.000	6.12	0.00	46.78	4.35
9341	13625	0.463833	ATCCGGACATTTCGGGCTTC	60.464	55.000	6.12	0.00	46.78	3.86
9342	13626	2.112815	CCGGACATTTCGGGCTTCC	61.113	63.158	0.00	0.00	43.45	3.46
9343	13627	2.112815	CGGACATTTCGGGCTTCCC	61.113	63.158	0.00	0.00	41.09	3.97
9344	13628	1.001393	GGACATTTCGGGCTTCCCA	60.001	57.895	2.47	0.00	45.83	4.37
9345	13629	0.610785	GGACATTTCGGGCTTCCCAA	60.611	55.000	2.47	0.00	45.83	4.12
9346	13630	1.253100	GACATTTCGGGCTTCCCAAA	58.747	50.000	2.47	2.97	45.83	3.28
9347	13631	1.616374	GACATTTCGGGCTTCCCAAAA	59.384	47.619	2.47	0.00	45.83	2.44
9348	13632	1.343142	ACATTTCGGGCTTCCCAAAAC	59.657	47.619	2.47	0.00	45.83	2.43
9349	13633	0.973632	ATTTCGGGCTTCCCAAAACC	59.026	50.000	2.47	0.00	45.83	3.27
9350	13634	0.397254	TTTCGGGCTTCCCAAAACCA	60.397	50.000	2.47	0.00	45.83	3.67
9351	13635	0.825840	TTCGGGCTTCCCAAAACCAG	60.826	55.000	2.47	0.00	45.83	4.00
9352	13636	2.931068	CGGGCTTCCCAAAACCAGC	61.931	63.158	2.47	0.00	45.83	4.85
9353	13637	3.059982	GGCTTCCCAAAACCAGCC	58.940	61.111	0.00	0.00	45.02	4.85
9354	13638	2.583441	GGCTTCCCAAAACCAGCCC	61.583	63.158	0.00	0.00	45.39	5.19
9355	13639	2.931068	GCTTCCCAAAACCAGCCCG	61.931	63.158	0.00	0.00	0.00	6.13
9356	13640	1.530655	CTTCCCAAAACCAGCCCGT	60.531	57.895	0.00	0.00	0.00	5.28
9357	13641	0.250989	CTTCCCAAAACCAGCCCGTA	60.251	55.000	0.00	0.00	0.00	4.02
9358	13642	0.406361	TTCCCAAAACCAGCCCGTAT	59.594	50.000	0.00	0.00	0.00	3.06
9359	13643	0.322997	TCCCAAAACCAGCCCGTATG	60.323	55.000	0.00	0.00	0.00	2.39
9360	13644	0.610785	CCCAAAACCAGCCCGTATGT	60.611	55.000	0.00	0.00	0.00	2.29
9361	13645	0.525761	CCAAAACCAGCCCGTATGTG	59.474	55.000	0.00	0.00	0.00	3.21
9362	13646	0.525761	CAAAACCAGCCCGTATGTGG	59.474	55.000	0.00	0.00	37.38	4.17
9375	13659	4.065088	CCGTATGTGGGACAGAAATATGG	58.935	47.826	0.00	0.00	41.80	2.74
9376	13660	4.444306	CCGTATGTGGGACAGAAATATGGT	60.444	45.833	0.00	0.00	41.80	3.55
9377	13661	5.123227	CGTATGTGGGACAGAAATATGGTT	58.877	41.667	0.00	0.00	41.80	3.67
9378	13662	5.007626	CGTATGTGGGACAGAAATATGGTTG	59.992	44.000	0.00	0.00	41.80	3.77
9379	13663	4.380843	TGTGGGACAGAAATATGGTTGT	57.619	40.909	0.00	0.00	41.80	3.32
9380	13664	4.331968	TGTGGGACAGAAATATGGTTGTC	58.668	43.478	5.58	5.58	41.80	3.18
9383	13667	2.943033	GGACAGAAATATGGTTGTCCGG	59.057	50.000	13.75	0.00	46.98	5.14
9384	13668	3.370103	GGACAGAAATATGGTTGTCCGGA	60.370	47.826	0.00	0.00	46.98	5.14
9385	13669	3.606687	ACAGAAATATGGTTGTCCGGAC	58.393	45.455	28.17	28.17	36.30	4.79
9386	13670	3.263425	ACAGAAATATGGTTGTCCGGACT	59.737	43.478	33.39	16.78	36.30	3.85
9387	13671	4.468510	ACAGAAATATGGTTGTCCGGACTA	59.531	41.667	33.39	24.89	36.30	2.59
9388	13672	5.130477	ACAGAAATATGGTTGTCCGGACTAT	59.870	40.000	33.39	22.77	36.30	2.12
9389	13673	5.696724	CAGAAATATGGTTGTCCGGACTATC	59.303	44.000	33.39	27.02	36.30	2.08
9390	13674	5.602978	AGAAATATGGTTGTCCGGACTATCT	59.397	40.000	33.39	20.30	36.30	1.98
9391	13675	4.873746	ATATGGTTGTCCGGACTATCTG	57.126	45.455	33.39	0.00	36.30	2.90
9392	13676	0.535335	TGGTTGTCCGGACTATCTGC	59.465	55.000	33.39	14.98	36.30	4.26
9393	13677	0.179081	GGTTGTCCGGACTATCTGCC	60.179	60.000	33.39	19.78	0.00	4.85
9394	13678	0.535335	GTTGTCCGGACTATCTGCCA	59.465	55.000	33.39	9.65	0.00	4.92
9395	13679	1.139058	GTTGTCCGGACTATCTGCCAT	59.861	52.381	33.39	0.00	0.00	4.40
9396	13680	0.752658	TGTCCGGACTATCTGCCATG	59.247	55.000	33.39	0.00	0.00	3.66
9397	13681	0.753262	GTCCGGACTATCTGCCATGT	59.247	55.000	27.64	0.00	0.00	3.21
9398	13682	1.139058	GTCCGGACTATCTGCCATGTT	59.861	52.381	27.64	0.00	0.00	2.71
9399	13683	2.364324	GTCCGGACTATCTGCCATGTTA	59.636	50.000	27.64	0.00	0.00	2.41
9400	13684	3.006967	GTCCGGACTATCTGCCATGTTAT	59.993	47.826	27.64	0.00	0.00	1.89
9401	13685	3.258372	TCCGGACTATCTGCCATGTTATC	59.742	47.826	0.00	0.00	0.00	1.75
9402	13686	3.259374	CCGGACTATCTGCCATGTTATCT	59.741	47.826	0.00	0.00	0.00	1.98
9403	13687	4.489810	CGGACTATCTGCCATGTTATCTC	58.510	47.826	0.00	0.00	0.00	2.75
9404	13688	4.619394	CGGACTATCTGCCATGTTATCTCC	60.619	50.000	0.00	0.00	0.00	3.71
9405	13689	4.284490	GGACTATCTGCCATGTTATCTCCA	59.716	45.833	0.00	0.00	0.00	3.86
9406	13690	5.221722	GGACTATCTGCCATGTTATCTCCAA	60.222	44.000	0.00	0.00	0.00	3.53
9407	13691	5.615289	ACTATCTGCCATGTTATCTCCAAC	58.385	41.667	0.00	0.00	0.00	3.77
9408	13692	3.998913	TCTGCCATGTTATCTCCAACA	57.001	42.857	0.00	0.00	42.32	3.33
9409	13693	3.609853	TCTGCCATGTTATCTCCAACAC	58.390	45.455	0.00	0.00	41.02	3.32
9410	13694	3.008923	TCTGCCATGTTATCTCCAACACA	59.991	43.478	0.00	0.00	41.02	3.72
9411	13695	3.949754	CTGCCATGTTATCTCCAACACAT	59.050	43.478	0.00	0.00	41.02	3.21
9412	13696	4.343231	TGCCATGTTATCTCCAACACATT	58.657	39.130	0.00	0.00	41.02	2.71
9413	13697	4.158209	TGCCATGTTATCTCCAACACATTG	59.842	41.667	0.00	0.00	41.02	2.82
9414	13698	4.158394	GCCATGTTATCTCCAACACATTGT	59.842	41.667	0.00	0.00	41.02	2.71
9415	13699	5.677091	GCCATGTTATCTCCAACACATTGTC	60.677	44.000	0.00	0.00	41.02	3.18
9416	13700	5.163622	CCATGTTATCTCCAACACATTGTCC	60.164	44.000	0.00	0.00	41.02	4.02
9417	13701	4.331968	TGTTATCTCCAACACATTGTCCC	58.668	43.478	0.00	0.00	33.55	4.46
9418	13702	4.202514	TGTTATCTCCAACACATTGTCCCA	60.203	41.667	0.00	0.00	33.55	4.37
9419	13703	3.524095	ATCTCCAACACATTGTCCCAA	57.476	42.857	0.00	0.00	33.60	4.12
9420	13704	2.582052	TCTCCAACACATTGTCCCAAC	58.418	47.619	0.00	0.00	33.60	3.77
9421	13705	2.092158	TCTCCAACACATTGTCCCAACA	60.092	45.455	0.00	0.00	33.60	3.33
9422	13706	2.028130	TCCAACACATTGTCCCAACAC	58.972	47.619	0.00	0.00	34.35	3.32
9423	13707	1.753649	CCAACACATTGTCCCAACACA	59.246	47.619	0.00	0.00	34.35	3.72
9424	13708	2.223782	CCAACACATTGTCCCAACACAG	60.224	50.000	0.00	0.00	34.35	3.66
9425	13709	2.687425	CAACACATTGTCCCAACACAGA	59.313	45.455	0.00	0.00	34.35	3.41
9426	13710	3.011566	ACACATTGTCCCAACACAGAA	57.988	42.857	0.00	0.00	34.35	3.02
9427	13711	3.360867	ACACATTGTCCCAACACAGAAA	58.639	40.909	0.00	0.00	34.35	2.52
9428	13712	3.766591	ACACATTGTCCCAACACAGAAAA	59.233	39.130	0.00	0.00	34.35	2.29
9429	13713	4.111916	CACATTGTCCCAACACAGAAAAC	58.888	43.478	0.00	0.00	34.35	2.43
9430	13714	4.023291	ACATTGTCCCAACACAGAAAACT	58.977	39.130	0.00	0.00	34.35	2.66
9431	13715	4.466015	ACATTGTCCCAACACAGAAAACTT	59.534	37.500	0.00	0.00	34.35	2.66
9432	13716	5.654650	ACATTGTCCCAACACAGAAAACTTA	59.345	36.000	0.00	0.00	34.35	2.24
9433	13717	5.570234	TTGTCCCAACACAGAAAACTTAC	57.430	39.130	0.00	0.00	34.35	2.34
9434	13718	3.949113	TGTCCCAACACAGAAAACTTACC	59.051	43.478	0.00	0.00	0.00	2.85
9435	13719	3.317149	GTCCCAACACAGAAAACTTACCC	59.683	47.826	0.00	0.00	0.00	3.69
9436	13720	2.626266	CCCAACACAGAAAACTTACCCC	59.374	50.000	0.00	0.00	0.00	4.95
9437	13721	2.626266	CCAACACAGAAAACTTACCCCC	59.374	50.000	0.00	0.00	0.00	5.40
9438	13722	3.292460	CAACACAGAAAACTTACCCCCA	58.708	45.455	0.00	0.00	0.00	4.96
9439	13723	3.895041	CAACACAGAAAACTTACCCCCAT	59.105	43.478	0.00	0.00	0.00	4.00
9440	13724	4.193240	ACACAGAAAACTTACCCCCATT	57.807	40.909	0.00	0.00	0.00	3.16
9441	13725	5.327737	ACACAGAAAACTTACCCCCATTA	57.672	39.130	0.00	0.00	0.00	1.90
9442	13726	5.074804	ACACAGAAAACTTACCCCCATTAC	58.925	41.667	0.00	0.00	0.00	1.89
9443	13727	4.155280	CACAGAAAACTTACCCCCATTACG	59.845	45.833	0.00	0.00	0.00	3.18
9444	13728	3.128068	CAGAAAACTTACCCCCATTACGC	59.872	47.826	0.00	0.00	0.00	4.42
9445	13729	2.883122	AAACTTACCCCCATTACGCA	57.117	45.000	0.00	0.00	0.00	5.24
9446	13730	2.118313	AACTTACCCCCATTACGCAC	57.882	50.000	0.00	0.00	0.00	5.34
9447	13731	1.282382	ACTTACCCCCATTACGCACT	58.718	50.000	0.00	0.00	0.00	4.40
9448	13732	1.208776	ACTTACCCCCATTACGCACTC	59.791	52.381	0.00	0.00	0.00	3.51
9449	13733	1.485066	CTTACCCCCATTACGCACTCT	59.515	52.381	0.00	0.00	0.00	3.24
9450	13734	1.575419	TACCCCCATTACGCACTCTT	58.425	50.000	0.00	0.00	0.00	2.85
9451	13735	0.252197	ACCCCCATTACGCACTCTTC	59.748	55.000	0.00	0.00	0.00	2.87
9452	13736	0.463833	CCCCCATTACGCACTCTTCC	60.464	60.000	0.00	0.00	0.00	3.46
9453	13737	0.463833	CCCCATTACGCACTCTTCCC	60.464	60.000	0.00	0.00	0.00	3.97
9454	13738	0.541863	CCCATTACGCACTCTTCCCT	59.458	55.000	0.00	0.00	0.00	4.20
9455	13739	1.065418	CCCATTACGCACTCTTCCCTT	60.065	52.381	0.00	0.00	0.00	3.95
9456	13740	2.618045	CCCATTACGCACTCTTCCCTTT	60.618	50.000	0.00	0.00	0.00	3.11
9457	13741	3.081804	CCATTACGCACTCTTCCCTTTT	58.918	45.455	0.00	0.00	0.00	2.27
9458	13742	3.127030	CCATTACGCACTCTTCCCTTTTC	59.873	47.826	0.00	0.00	0.00	2.29
9459	13743	3.478857	TTACGCACTCTTCCCTTTTCA	57.521	42.857	0.00	0.00	0.00	2.69
9460	13744	2.568623	ACGCACTCTTCCCTTTTCAT	57.431	45.000	0.00	0.00	0.00	2.57
9461	13745	2.154462	ACGCACTCTTCCCTTTTCATG	58.846	47.619	0.00	0.00	0.00	3.07
9462	13746	2.154462	CGCACTCTTCCCTTTTCATGT	58.846	47.619	0.00	0.00	0.00	3.21
9463	13747	2.160417	CGCACTCTTCCCTTTTCATGTC	59.840	50.000	0.00	0.00	0.00	3.06
9464	13748	2.160417	GCACTCTTCCCTTTTCATGTCG	59.840	50.000	0.00	0.00	0.00	4.35
9465	13749	2.744202	CACTCTTCCCTTTTCATGTCGG	59.256	50.000	0.00	0.00	0.00	4.79
9466	13750	2.637872	ACTCTTCCCTTTTCATGTCGGA	59.362	45.455	0.00	0.00	0.00	4.55
9467	13751	3.003480	CTCTTCCCTTTTCATGTCGGAC	58.997	50.000	0.00	0.00	0.00	4.79
9468	13752	2.084546	CTTCCCTTTTCATGTCGGACC	58.915	52.381	5.55	0.00	0.00	4.46
9469	13753	0.326927	TCCCTTTTCATGTCGGACCC	59.673	55.000	5.55	0.00	0.00	4.46
9470	13754	0.328258	CCCTTTTCATGTCGGACCCT	59.672	55.000	5.55	0.00	0.00	4.34
9471	13755	1.679032	CCCTTTTCATGTCGGACCCTC	60.679	57.143	5.55	0.00	0.00	4.30
9472	13756	1.679032	CCTTTTCATGTCGGACCCTCC	60.679	57.143	5.55	0.00	0.00	4.30
9473	13757	0.326927	TTTTCATGTCGGACCCTCCC	59.673	55.000	5.55	0.00	31.13	4.30
9474	13758	1.559065	TTTCATGTCGGACCCTCCCC	61.559	60.000	5.55	0.00	31.13	4.81
9475	13759	2.365635	CATGTCGGACCCTCCCCT	60.366	66.667	5.55	0.00	31.13	4.79
9476	13760	1.995626	CATGTCGGACCCTCCCCTT	60.996	63.158	5.55	0.00	31.13	3.95
9477	13761	1.689582	ATGTCGGACCCTCCCCTTC	60.690	63.158	5.55	0.00	31.13	3.46
9478	13762	3.082055	GTCGGACCCTCCCCTTCC	61.082	72.222	0.00	0.00	31.13	3.46
9479	13763	4.410033	TCGGACCCTCCCCTTCCC	62.410	72.222	0.00	0.00	31.13	3.97
9480	13764	4.733725	CGGACCCTCCCCTTCCCA	62.734	72.222	0.00	0.00	31.13	4.37
9481	13765	3.015753	GGACCCTCCCCTTCCCAC	61.016	72.222	0.00	0.00	0.00	4.61
9482	13766	2.125225	GACCCTCCCCTTCCCACT	59.875	66.667	0.00	0.00	0.00	4.00
9483	13767	1.541620	GACCCTCCCCTTCCCACTT	60.542	63.158	0.00	0.00	0.00	3.16
9484	13768	1.852626	ACCCTCCCCTTCCCACTTG	60.853	63.158	0.00	0.00	0.00	3.16
9485	13769	2.616458	CCCTCCCCTTCCCACTTGG	61.616	68.421	0.00	0.00	0.00	3.61
9486	13770	1.852626	CCTCCCCTTCCCACTTGGT	60.853	63.158	0.00	0.00	34.77	3.67
9487	13771	1.435346	CCTCCCCTTCCCACTTGGTT	61.435	60.000	0.00	0.00	34.77	3.67
9488	13772	0.482887	CTCCCCTTCCCACTTGGTTT	59.517	55.000	0.00	0.00	34.77	3.27
9489	13773	0.481128	TCCCCTTCCCACTTGGTTTC	59.519	55.000	0.00	0.00	34.77	2.78
9490	13774	0.541998	CCCCTTCCCACTTGGTTTCC	60.542	60.000	0.00	0.00	34.77	3.13
9491	13775	0.541998	CCCTTCCCACTTGGTTTCCC	60.542	60.000	0.00	0.00	34.77	3.97
9492	13776	0.893727	CCTTCCCACTTGGTTTCCCG	60.894	60.000	0.00	0.00	34.77	5.14
9493	13777	1.524008	CTTCCCACTTGGTTTCCCGC	61.524	60.000	0.00	0.00	34.77	6.13
9494	13778	2.987355	TTCCCACTTGGTTTCCCGCC	62.987	60.000	0.00	0.00	34.77	6.13
9495	13779	3.361977	CCACTTGGTTTCCCGCCG	61.362	66.667	0.00	0.00	0.00	6.46
9496	13780	2.593436	CACTTGGTTTCCCGCCGT	60.593	61.111	0.00	0.00	0.00	5.68
9497	13781	1.301874	CACTTGGTTTCCCGCCGTA	60.302	57.895	0.00	0.00	0.00	4.02
9498	13782	1.004200	ACTTGGTTTCCCGCCGTAG	60.004	57.895	0.00	0.00	0.00	3.51
9499	13783	2.358984	TTGGTTTCCCGCCGTAGC	60.359	61.111	0.00	0.00	0.00	3.58
9511	13795	2.973420	CCGTAGCGGGACATTTCTC	58.027	57.895	0.00	0.00	44.15	2.87
9516	13800	3.799753	CGGGACATTTCTCGCTGG	58.200	61.111	0.00	0.00	39.37	4.85
9517	13801	1.218047	CGGGACATTTCTCGCTGGA	59.782	57.895	0.00	0.00	39.37	3.86
9518	13802	0.807667	CGGGACATTTCTCGCTGGAG	60.808	60.000	0.00	0.00	39.37	3.86
9519	13803	1.092345	GGGACATTTCTCGCTGGAGC	61.092	60.000	0.00	0.00	40.26	4.70
9520	13804	0.107945	GGACATTTCTCGCTGGAGCT	60.108	55.000	0.00	0.00	40.26	4.09
9521	13805	1.285578	GACATTTCTCGCTGGAGCTC	58.714	55.000	4.71	4.71	40.26	4.09
9522	13806	0.901124	ACATTTCTCGCTGGAGCTCT	59.099	50.000	14.64	0.00	40.26	4.09
9523	13807	1.134848	ACATTTCTCGCTGGAGCTCTC	60.135	52.381	14.64	4.40	40.26	3.20
9524	13808	1.136695	CATTTCTCGCTGGAGCTCTCT	59.863	52.381	14.64	0.00	40.26	3.10
9525	13809	0.814457	TTTCTCGCTGGAGCTCTCTC	59.186	55.000	14.64	0.00	40.26	3.20
9539	13823	6.569179	GAGCTCTCTCCTTTAATACGAGAT	57.431	41.667	6.43	0.00	32.42	2.75
9540	13824	6.325919	AGCTCTCTCCTTTAATACGAGATG	57.674	41.667	0.00	0.00	32.42	2.90
9541	13825	6.065374	AGCTCTCTCCTTTAATACGAGATGA	58.935	40.000	0.00	0.00	32.42	2.92
9542	13826	6.016610	AGCTCTCTCCTTTAATACGAGATGAC	60.017	42.308	0.00	0.00	32.42	3.06
9543	13827	6.301687	TCTCTCCTTTAATACGAGATGACG	57.698	41.667	0.00	0.00	32.42	4.35
9544	13828	4.856664	TCTCCTTTAATACGAGATGACGC	58.143	43.478	0.00	0.00	36.70	5.19
9545	13829	4.337274	TCTCCTTTAATACGAGATGACGCA	59.663	41.667	0.00	0.00	36.70	5.24
9546	13830	5.001237	TCCTTTAATACGAGATGACGCAA	57.999	39.130	0.00	0.00	36.70	4.85
9547	13831	5.597806	TCCTTTAATACGAGATGACGCAAT	58.402	37.500	0.00	0.00	36.70	3.56
9548	13832	6.046593	TCCTTTAATACGAGATGACGCAATT	58.953	36.000	0.00	0.00	36.70	2.32
9549	13833	6.200286	TCCTTTAATACGAGATGACGCAATTC	59.800	38.462	0.00	0.00	36.70	2.17
9550	13834	5.900339	TTAATACGAGATGACGCAATTCC	57.100	39.130	0.00	0.00	36.70	3.01
9551	13835	3.735237	ATACGAGATGACGCAATTCCT	57.265	42.857	0.00	0.00	36.70	3.36
9552	13836	4.848562	ATACGAGATGACGCAATTCCTA	57.151	40.909	0.00	0.00	36.70	2.94
9553	13837	3.085443	ACGAGATGACGCAATTCCTAG	57.915	47.619	0.00	0.00	36.70	3.02
9554	13838	2.427453	ACGAGATGACGCAATTCCTAGT	59.573	45.455	0.00	0.00	36.70	2.57
9555	13839	3.119101	ACGAGATGACGCAATTCCTAGTT	60.119	43.478	0.00	0.00	36.70	2.24
9556	13840	3.243877	CGAGATGACGCAATTCCTAGTTG	59.756	47.826	0.00	0.00	0.00	3.16
9557	13841	4.184629	GAGATGACGCAATTCCTAGTTGT	58.815	43.478	0.00	0.00	0.00	3.32
9558	13842	4.184629	AGATGACGCAATTCCTAGTTGTC	58.815	43.478	0.00	0.00	0.00	3.18
9559	13843	3.394674	TGACGCAATTCCTAGTTGTCA	57.605	42.857	0.00	0.00	32.93	3.58
9560	13844	3.064207	TGACGCAATTCCTAGTTGTCAC	58.936	45.455	0.00	0.00	30.61	3.67
9561	13845	3.064207	GACGCAATTCCTAGTTGTCACA	58.936	45.455	0.00	0.00	0.00	3.58
9562	13846	2.806244	ACGCAATTCCTAGTTGTCACAC	59.194	45.455	0.00	0.00	0.00	3.82
9563	13847	2.159627	CGCAATTCCTAGTTGTCACACC	59.840	50.000	0.00	0.00	0.00	4.16
9564	13848	2.159627	GCAATTCCTAGTTGTCACACCG	59.840	50.000	0.00	0.00	0.00	4.94
9565	13849	3.399330	CAATTCCTAGTTGTCACACCGT	58.601	45.455	0.00	0.00	0.00	4.83
9566	13850	2.806608	TTCCTAGTTGTCACACCGTC	57.193	50.000	0.00	0.00	0.00	4.79
9567	13851	0.594602	TCCTAGTTGTCACACCGTCG	59.405	55.000	0.00	0.00	0.00	5.12
9568	13852	1.007336	CCTAGTTGTCACACCGTCGC	61.007	60.000	0.00	0.00	0.00	5.19
9569	13853	0.318360	CTAGTTGTCACACCGTCGCA	60.318	55.000	0.00	0.00	0.00	5.10
9570	13854	0.102663	TAGTTGTCACACCGTCGCAA	59.897	50.000	0.00	0.00	0.00	4.85
9571	13855	0.531974	AGTTGTCACACCGTCGCAAT	60.532	50.000	0.00	0.00	0.00	3.56
9572	13856	0.306533	GTTGTCACACCGTCGCAATT	59.693	50.000	0.00	0.00	0.00	2.32
9573	13857	0.584396	TTGTCACACCGTCGCAATTC	59.416	50.000	0.00	0.00	0.00	2.17
9574	13858	0.249699	TGTCACACCGTCGCAATTCT	60.250	50.000	0.00	0.00	0.00	2.40
9575	13859	0.438830	GTCACACCGTCGCAATTCTC	59.561	55.000	0.00	0.00	0.00	2.87
9576	13860	1.006825	TCACACCGTCGCAATTCTCG	61.007	55.000	0.00	0.00	0.00	4.04
9577	13861	1.006825	CACACCGTCGCAATTCTCGA	61.007	55.000	0.00	0.00	0.00	4.04
9578	13862	0.108804	ACACCGTCGCAATTCTCGAT	60.109	50.000	3.09	0.00	38.29	3.59
9579	13863	1.133598	ACACCGTCGCAATTCTCGATA	59.866	47.619	3.09	0.00	38.29	2.92
9580	13864	1.517276	CACCGTCGCAATTCTCGATAC	59.483	52.381	3.09	0.00	38.29	2.24
9581	13865	1.404391	ACCGTCGCAATTCTCGATACT	59.596	47.619	3.09	0.00	38.29	2.12
9582	13866	2.159282	ACCGTCGCAATTCTCGATACTT	60.159	45.455	3.09	0.00	38.29	2.24
9583	13867	2.216488	CCGTCGCAATTCTCGATACTTG	59.784	50.000	3.09	0.00	38.29	3.16
9584	13868	3.105937	CGTCGCAATTCTCGATACTTGA	58.894	45.455	5.26	0.00	38.29	3.02
9585	13869	3.546271	CGTCGCAATTCTCGATACTTGAA	59.454	43.478	5.26	0.00	38.29	2.69
9586	13870	4.207224	CGTCGCAATTCTCGATACTTGAAT	59.793	41.667	5.26	0.00	38.29	2.57
9587	13871	5.608418	CGTCGCAATTCTCGATACTTGAATC	60.608	44.000	5.26	0.00	38.29	2.52
9588	13872	5.232202	GTCGCAATTCTCGATACTTGAATCA	59.768	40.000	5.26	0.00	38.29	2.57
9589	13873	5.232202	TCGCAATTCTCGATACTTGAATCAC	59.768	40.000	5.26	0.00	31.03	3.06
9590	13874	5.233050	CGCAATTCTCGATACTTGAATCACT	59.767	40.000	5.26	0.00	31.03	3.41
9591	13875	6.417327	GCAATTCTCGATACTTGAATCACTG	58.583	40.000	5.26	0.00	31.03	3.66
9592	13876	6.036517	GCAATTCTCGATACTTGAATCACTGT	59.963	38.462	5.26	0.00	31.03	3.55

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
24	25	7.254932	GCATAGGAGGTTGAAGACAAACATATC	60.255	40.741	0.00	0.00	45.16	1.63
32	33	3.055094	GGAAGCATAGGAGGTTGAAGACA	60.055	47.826	0.00	0.00	0.00	3.41
33	34	3.198853	AGGAAGCATAGGAGGTTGAAGAC	59.801	47.826	0.00	0.00	0.00	3.01
163	164	2.206223	ACTTAATTGGAGGGAGGGGTC	58.794	52.381	0.00	0.00	0.00	4.46
169	170	5.570844	CGAGGAAGAAACTTAATTGGAGGGA	60.571	44.000	0.00	0.00	0.00	4.20
264	268	3.286751	GCACGTGGCCAAAGCTGA	61.287	61.111	18.88	0.00	39.73	4.26
266	270	3.289834	CAGCACGTGGCCAAAGCT	61.290	61.111	18.88	18.99	46.50	3.74
284	288	3.200483	TCATGCATCAGTCAATTCCTCG	58.800	45.455	0.00	0.00	0.00	4.63
293	297	6.444633	CCTGGAATATTTTCATGCATCAGTC	58.555	40.000	0.00	0.00	33.23	3.51
296	300	4.261698	CGCCTGGAATATTTTCATGCATCA	60.262	41.667	0.00	0.00	33.23	3.07
299	303	3.023119	ACGCCTGGAATATTTTCATGCA	58.977	40.909	0.00	0.00	33.23	3.96
309	313	4.994852	GCTAATTGTCATACGCCTGGAATA	59.005	41.667	0.00	0.00	0.00	1.75
338	342	1.340017	GGTGGCACCAATCTCTTGCTA	60.340	52.381	31.26	0.00	38.42	3.49
369	373	2.671177	CCACAAGAGAGCGCAACGG	61.671	63.158	11.47	0.00	0.00	4.44
370	374	2.671177	CCCACAAGAGAGCGCAACG	61.671	63.158	11.47	0.00	0.00	4.10
399	403	5.576447	AATTTGGTATTGGTTCGATGGTC	57.424	39.130	0.00	0.00	0.00	4.02
401	405	8.816144	CATTTTAATTTGGTATTGGTTCGATGG	58.184	33.333	0.00	0.00	0.00	3.51
433	437	9.768662	AGATGCAGAACTAACAAATTGAAAATT	57.231	25.926	0.00	0.00	0.00	1.82
440	444	6.655078	AACCAGATGCAGAACTAACAAATT	57.345	33.333	0.00	0.00	0.00	1.82
441	445	6.714810	TGTAACCAGATGCAGAACTAACAAAT	59.285	34.615	0.00	0.00	0.00	2.32
516	566	8.083970	CATCTAGATGTGTCATGGACAGACCA	62.084	46.154	22.42	0.00	43.57	4.02
517	567	3.701542	TCTAGATGTGTCATGGACAGACC	59.298	47.826	0.00	0.00	43.57	3.85
518	568	4.991153	TCTAGATGTGTCATGGACAGAC	57.009	45.455	0.00	0.00	43.57	3.51
519	569	5.203528	TCATCTAGATGTGTCATGGACAGA	58.796	41.667	27.80	5.38	43.57	3.41
520	570	5.526506	TCATCTAGATGTGTCATGGACAG	57.473	43.478	27.80	2.51	43.57	3.51
521	571	4.202192	GCTCATCTAGATGTGTCATGGACA	60.202	45.833	27.80	7.73	37.61	4.02
522	572	4.305769	GCTCATCTAGATGTGTCATGGAC	58.694	47.826	27.80	10.49	39.72	4.02
523	573	3.323115	GGCTCATCTAGATGTGTCATGGA	59.677	47.826	26.59	9.62	37.02	3.41
524	574	3.556633	GGGCTCATCTAGATGTGTCATGG	60.557	52.174	30.19	15.77	38.31	3.66
525	575	3.324268	AGGGCTCATCTAGATGTGTCATG	59.676	47.826	30.19	17.08	38.31	3.07
526	576	3.585360	AGGGCTCATCTAGATGTGTCAT	58.415	45.455	30.19	24.63	38.31	3.06
527	577	3.037851	AGGGCTCATCTAGATGTGTCA	57.962	47.619	30.19	14.37	38.31	3.58
528	578	4.148838	ACTAGGGCTCATCTAGATGTGTC	58.851	47.826	27.80	26.11	39.72	3.67
529	579	4.191804	ACTAGGGCTCATCTAGATGTGT	57.808	45.455	27.80	14.68	39.72	3.72
530	580	6.849085	ATAACTAGGGCTCATCTAGATGTG	57.151	41.667	27.80	25.91	39.72	3.21
531	581	7.245292	AGAATAACTAGGGCTCATCTAGATGT	58.755	38.462	27.80	13.87	39.72	3.06
532	582	7.716799	AGAATAACTAGGGCTCATCTAGATG	57.283	40.000	24.32	24.32	38.02	2.90
533	583	8.394822	TGTAGAATAACTAGGGCTCATCTAGAT	58.605	37.037	0.00	0.00	38.02	1.98
534	584	7.756614	TGTAGAATAACTAGGGCTCATCTAGA	58.243	38.462	0.00	0.00	38.02	2.43
535	585	8.588290	ATGTAGAATAACTAGGGCTCATCTAG	57.412	38.462	0.00	0.00	39.88	2.43
536	586	8.394822	AGATGTAGAATAACTAGGGCTCATCTA	58.605	37.037	0.00	0.00	37.75	1.98
537	587	7.245292	AGATGTAGAATAACTAGGGCTCATCT	58.755	38.462	0.00	0.00	36.25	2.90
538	588	7.475137	AGATGTAGAATAACTAGGGCTCATC	57.525	40.000	0.00	0.00	33.55	2.92
539	589	8.958060	TTAGATGTAGAATAACTAGGGCTCAT	57.042	34.615	0.00	0.00	0.00	2.90
540	590	8.005388	ACTTAGATGTAGAATAACTAGGGCTCA	58.995	37.037	0.00	0.00	0.00	4.26
541	591	8.301002	CACTTAGATGTAGAATAACTAGGGCTC	58.699	40.741	0.00	0.00	0.00	4.70
542	592	7.256012	GCACTTAGATGTAGAATAACTAGGGCT	60.256	40.741	0.00	0.00	0.00	5.19
543	593	6.869388	GCACTTAGATGTAGAATAACTAGGGC	59.131	42.308	0.00	0.00	0.00	5.19
544	594	8.184304	AGCACTTAGATGTAGAATAACTAGGG	57.816	38.462	0.00	0.00	0.00	3.53
545	595	8.851145	TGAGCACTTAGATGTAGAATAACTAGG	58.149	37.037	0.00	0.00	0.00	3.02
548	598	9.757227	GATTGAGCACTTAGATGTAGAATAACT	57.243	33.333	0.00	0.00	0.00	2.24
549	599	9.534565	TGATTGAGCACTTAGATGTAGAATAAC	57.465	33.333	0.00	0.00	0.00	1.89
552	602	8.887717	GTTTGATTGAGCACTTAGATGTAGAAT	58.112	33.333	0.00	0.00	0.00	2.40
553	603	8.097038	AGTTTGATTGAGCACTTAGATGTAGAA	58.903	33.333	0.00	0.00	0.00	2.10
554	604	7.615403	AGTTTGATTGAGCACTTAGATGTAGA	58.385	34.615	0.00	0.00	0.00	2.59
555	605	7.840342	AGTTTGATTGAGCACTTAGATGTAG	57.160	36.000	0.00	0.00	0.00	2.74
556	606	8.749354	TCTAGTTTGATTGAGCACTTAGATGTA	58.251	33.333	0.00	0.00	0.00	2.29
557	607	7.615403	TCTAGTTTGATTGAGCACTTAGATGT	58.385	34.615	0.00	0.00	0.00	3.06
558	608	8.484641	TTCTAGTTTGATTGAGCACTTAGATG	57.515	34.615	0.00	0.00	0.00	2.90
559	609	9.160496	CTTTCTAGTTTGATTGAGCACTTAGAT	57.840	33.333	0.00	0.00	0.00	1.98
560	610	8.367911	TCTTTCTAGTTTGATTGAGCACTTAGA	58.632	33.333	0.00	0.00	0.00	2.10
561	611	8.539770	TCTTTCTAGTTTGATTGAGCACTTAG	57.460	34.615	0.00	0.00	0.00	2.18
562	612	8.902540	TTCTTTCTAGTTTGATTGAGCACTTA	57.097	30.769	0.00	0.00	0.00	2.24
563	613	7.807977	TTCTTTCTAGTTTGATTGAGCACTT	57.192	32.000	0.00	0.00	0.00	3.16
564	614	7.807977	TTTCTTTCTAGTTTGATTGAGCACT	57.192	32.000	0.00	0.00	0.00	4.40
565	615	8.856490	TTTTTCTTTCTAGTTTGATTGAGCAC	57.144	30.769	0.00	0.00	0.00	4.40
566	616	8.902806	TCTTTTTCTTTCTAGTTTGATTGAGCA	58.097	29.630	0.00	0.00	0.00	4.26
567	617	9.736023	TTCTTTTTCTTTCTAGTTTGATTGAGC	57.264	29.630	0.00	0.00	0.00	4.26
603	653	7.357303	ACATTAAGATTCGTGTAAGCGTTTTT	58.643	30.769	0.00	0.00	0.00	1.94
604	654	6.894828	ACATTAAGATTCGTGTAAGCGTTTT	58.105	32.000	0.00	0.00	0.00	2.43
605	655	6.476243	ACATTAAGATTCGTGTAAGCGTTT	57.524	33.333	0.00	0.00	0.00	3.60
606	656	7.585286	TTACATTAAGATTCGTGTAAGCGTT	57.415	32.000	0.00	0.00	33.50	4.84
607	657	7.585286	TTTACATTAAGATTCGTGTAAGCGT	57.415	32.000	0.00	0.00	38.04	5.07
608	658	9.485591	AATTTTACATTAAGATTCGTGTAAGCG	57.514	29.630	0.00	0.00	38.04	4.68
643	693	9.003658	GCTATAAGTATTGCACATCCAAGTTAT	57.996	33.333	0.00	0.00	35.12	1.89
644	694	7.990314	TGCTATAAGTATTGCACATCCAAGTTA	59.010	33.333	3.73	0.00	38.99	2.24
645	695	6.828273	TGCTATAAGTATTGCACATCCAAGTT	59.172	34.615	3.73	0.00	38.99	2.66
646	696	6.356556	TGCTATAAGTATTGCACATCCAAGT	58.643	36.000	3.73	0.00	38.99	3.16
647	697	6.866010	TGCTATAAGTATTGCACATCCAAG	57.134	37.500	3.73	0.00	38.99	3.61
655	705	8.925700	CGATCTAAATGTGCTATAAGTATTGCA	58.074	33.333	3.73	3.73	40.96	4.08
656	706	8.926710	ACGATCTAAATGTGCTATAAGTATTGC	58.073	33.333	0.00	0.00	35.48	3.56
702	752	4.380761	GGTTACCAAACGAGGTGTGTTTTT	60.381	41.667	0.00	0.00	43.14	1.94
703	753	3.129113	GGTTACCAAACGAGGTGTGTTTT	59.871	43.478	0.00	0.00	43.14	2.43
704	754	2.684374	GGTTACCAAACGAGGTGTGTTT	59.316	45.455	0.00	0.00	43.14	2.83
705	755	2.291365	GGTTACCAAACGAGGTGTGTT	58.709	47.619	0.00	0.00	43.14	3.32
706	756	1.209990	TGGTTACCAAACGAGGTGTGT	59.790	47.619	0.00	0.00	43.14	3.72
707	757	1.956297	TGGTTACCAAACGAGGTGTG	58.044	50.000	0.00	0.00	43.14	3.82
749	799	7.863722	TGGATTTTGATTCCAATTCCATGATT	58.136	30.769	9.05	0.00	40.29	2.57
750	800	7.346175	TCTGGATTTTGATTCCAATTCCATGAT	59.654	33.333	12.11	0.00	42.56	2.45
764	814	5.901552	ACAACAAAACGTCTGGATTTTGAT	58.098	33.333	13.50	1.00	44.85	2.57
798	848	1.813513	GGCAATACTGATCCCGATGG	58.186	55.000	0.00	0.00	0.00	3.51
801	851	0.387929	GTCGGCAATACTGATCCCGA	59.612	55.000	3.29	3.29	44.85	5.14
820	870	2.878858	GAAGGGGATTTGGGGGCCAG	62.879	65.000	4.39	0.00	33.81	4.85
918	984	0.905357	AGGTGACGAAATGGAGAGGG	59.095	55.000	0.00	0.00	0.00	4.30
931	997	2.663196	CAGGGTCGGGAAGGTGAC	59.337	66.667	0.00	0.00	0.00	3.67
989	1056	4.515404	CGGGTCTGAATCCGTTCC	57.485	61.111	11.16	0.00	41.23	3.62
998	1065	1.330655	GGAGAATCAGGCGGGTCTGA	61.331	60.000	5.33	5.33	46.32	3.27
1106	1173	3.845259	GAGGCGGGATGGTGCGTA	61.845	66.667	0.00	0.00	0.00	4.42
1130	1197	3.519930	GGGAGACGGAGCCGAGTC	61.520	72.222	16.83	10.81	42.83	3.36
1209	1276	1.227823	CCGCTGTCAGTCAAACCCA	60.228	57.895	0.93	0.00	0.00	4.51
1210	1277	0.951040	CTCCGCTGTCAGTCAAACCC	60.951	60.000	0.93	0.00	0.00	4.11
1318	1496	1.669760	CGAGTTTTGTAGGCGGCCA	60.670	57.895	23.09	4.27	0.00	5.36
1328	1506	3.723250	GCTCAAGATTCGAGCGAGTTTTG	60.723	47.826	10.84	10.84	45.82	2.44
1356	1534	1.382009	GTGGGGGAGAGAGAGGGTC	60.382	68.421	0.00	0.00	0.00	4.46
1357	1535	2.781406	GTGGGGGAGAGAGAGGGT	59.219	66.667	0.00	0.00	0.00	4.34
1358	1536	2.041405	GGTGGGGGAGAGAGAGGG	60.041	72.222	0.00	0.00	0.00	4.30
1361	1539	2.997584	CGGAGGTGGGGGAGAGAGA	61.998	68.421	0.00	0.00	0.00	3.10
1376	1561	1.682684	GAGCCTGGGAGAAGACGGA	60.683	63.158	0.00	0.00	0.00	4.69
1432	1617	3.197790	CACCGGCCATCTTCGCTG	61.198	66.667	0.00	0.00	0.00	5.18
1448	1637	4.383861	CGCCTGGTGCTGCTCTCA	62.384	66.667	0.00	0.00	38.05	3.27
1504	1693	1.122632	TTGCAGTACCTGGAACCGGA	61.123	55.000	9.46	0.00	36.92	5.14
1551	1740	1.992277	GAGCAGGGGAGGAAGAGCA	60.992	63.158	0.00	0.00	0.00	4.26
1552	1741	2.907236	GAGCAGGGGAGGAAGAGC	59.093	66.667	0.00	0.00	0.00	4.09
1553	1742	3.087666	GCGAGCAGGGGAGGAAGAG	62.088	68.421	0.00	0.00	0.00	2.85
1554	1743	3.077556	GCGAGCAGGGGAGGAAGA	61.078	66.667	0.00	0.00	0.00	2.87
1557	1746	4.841617	ATCGCGAGCAGGGGAGGA	62.842	66.667	16.66	0.00	32.03	3.71
1559	1748	3.531207	TCATCGCGAGCAGGGGAG	61.531	66.667	16.66	0.00	32.03	4.30
1560	1749	3.838271	GTCATCGCGAGCAGGGGA	61.838	66.667	16.66	2.08	0.00	4.81
1573	1762	1.234615	CCCAACAGAAACGGCGTCAT	61.235	55.000	15.17	5.28	0.00	3.06
1590	1779	1.826385	CTCACATCCTGACCAAACCC	58.174	55.000	0.00	0.00	0.00	4.11
1648	1853	4.007462	TCCAAACAAATGGAACAGGGGAG	61.007	47.826	0.00	0.00	46.36	4.30
1659	1864	1.003262	CAGCGCGGTCCAAACAAATG	61.003	55.000	8.38	0.00	0.00	2.32
1660	1865	1.285641	CAGCGCGGTCCAAACAAAT	59.714	52.632	8.38	0.00	0.00	2.32
1712	1920	2.564947	ACGAGAACTTCCTGAGCAGATT	59.435	45.455	0.00	0.00	0.00	2.40
1713	1921	2.175202	ACGAGAACTTCCTGAGCAGAT	58.825	47.619	0.00	0.00	0.00	2.90
1954	2184	5.127491	AGAAGAATACGGTTGTTGTTTGGA	58.873	37.500	0.00	0.00	0.00	3.53
2090	2320	5.675538	AGATAAGTTACCAACATGCCTCTC	58.324	41.667	0.00	0.00	0.00	3.20
2153	2386	2.069465	ATCGCAGACCAGCTAGCTCG	62.069	60.000	16.15	11.74	42.51	5.03
2171	2404	2.207501	CTGCAGGTGCTTCCCCAGAT	62.208	60.000	5.57	0.00	42.66	2.90
2174	2407	3.177884	ACTGCAGGTGCTTCCCCA	61.178	61.111	19.93	0.00	42.66	4.96
2265	2498	3.201930	TGGCCTCATGCTTATTCCTAACA	59.798	43.478	3.32	0.00	40.92	2.41
2266	2499	3.820557	TGGCCTCATGCTTATTCCTAAC	58.179	45.455	3.32	0.00	40.92	2.34
2267	2500	4.729552	ATGGCCTCATGCTTATTCCTAA	57.270	40.909	3.32	0.00	40.92	2.69
2268	2501	4.225942	CCTATGGCCTCATGCTTATTCCTA	59.774	45.833	3.32	0.00	40.92	2.94
2269	2502	3.009916	CCTATGGCCTCATGCTTATTCCT	59.990	47.826	3.32	0.00	40.92	3.36
2270	2503	3.350833	CCTATGGCCTCATGCTTATTCC	58.649	50.000	3.32	0.00	40.92	3.01
2271	2504	2.751806	GCCTATGGCCTCATGCTTATTC	59.248	50.000	3.32	0.00	44.06	1.75
2272	2505	2.800250	GCCTATGGCCTCATGCTTATT	58.200	47.619	3.32	0.00	44.06	1.40
2273	2506	2.503895	GCCTATGGCCTCATGCTTAT	57.496	50.000	3.32	0.00	44.06	1.73
2275	2508	4.916358	GCCTATGGCCTCATGCTT	57.084	55.556	3.32	0.00	44.06	3.91
2943	3190	5.299531	CGGTTCACTATAGTCATCTCCTTCA	59.700	44.000	1.26	0.00	0.00	3.02
4328	4625	3.793888	CCCTTCTACCCACGCCCC	61.794	72.222	0.00	0.00	0.00	5.80
4355	4652	2.974536	CTCTCGAGACGTGACTTTTGAC	59.025	50.000	12.08	0.00	0.00	3.18
4564	4861	4.347453	CTTTGCAGGGTGGCGTGC	62.347	66.667	0.00	0.00	40.29	5.34
4565	4862	4.347453	GCTTTGCAGGGTGGCGTG	62.347	66.667	0.00	0.00	36.28	5.34
4679	4982	2.610479	GCATCGTCACCTTCTTGAGACA	60.610	50.000	0.00	0.00	0.00	3.41
4782	5085	5.532557	CGAGTATATCTCCAAGATGTTGCA	58.467	41.667	0.00	0.00	39.84	4.08
4805	5108	3.117171	CGTGCTGACTCTGCTGGC	61.117	66.667	9.11	0.00	0.00	4.85
4883	5186	5.123502	GTCTTCTCGTAGTGAGGTGTTATCA	59.876	44.000	0.00	0.00	45.32	2.15
5062	5367	0.881796	GCTTGGTAAACAGGTCCAGC	59.118	55.000	0.00	0.00	32.63	4.85
5464	5769	0.901827	TCGAGGCATTCTTAGCACCA	59.098	50.000	0.00	0.00	0.00	4.17
5576	5881	8.666573	GGAGCATCTTTTCATATGACTCATATG	58.333	37.037	24.69	24.69	43.69	1.78
5577	5882	8.380867	TGGAGCATCTTTTCATATGACTCATAT	58.619	33.333	4.48	5.80	34.68	1.78
5578	5883	7.738847	TGGAGCATCTTTTCATATGACTCATA	58.261	34.615	4.48	1.10	32.57	2.15
5579	5884	6.598503	TGGAGCATCTTTTCATATGACTCAT	58.401	36.000	4.48	0.00	32.57	2.90
5580	5885	5.993055	TGGAGCATCTTTTCATATGACTCA	58.007	37.500	4.48	0.00	32.57	3.41
6369	6700	0.745845	GTCCACTGGATCGCTGCATT	60.746	55.000	0.00	0.00	32.73	3.56
6389	6720	3.847602	CTCCTCCTGCCCGAGCTG	61.848	72.222	0.00	0.00	40.80	4.24
6518	7230	3.376935	AAGGCCTCCTCATCGTGCG	62.377	63.158	5.23	0.00	30.89	5.34
6520	7232	1.227089	CGAAGGCCTCCTCATCGTG	60.227	63.158	5.23	0.00	31.54	4.35
6521	7233	2.427245	CCGAAGGCCTCCTCATCGT	61.427	63.158	19.57	0.00	46.14	3.73
6659	7764	2.024871	CTCGTGCTCGATCCCGTC	59.975	66.667	11.75	0.00	45.21	4.79
6660	7765	2.341101	AACTCGTGCTCGATCCCGT	61.341	57.895	11.75	3.18	45.21	5.28
6661	7766	1.874019	CAACTCGTGCTCGATCCCG	60.874	63.158	11.75	2.51	45.21	5.14
6662	7767	4.094684	CAACTCGTGCTCGATCCC	57.905	61.111	11.75	0.00	45.21	3.85
6694	7799	6.042208	ACATGGTATTAGAGCTCTAGGGTTTC	59.958	42.308	22.19	12.10	0.00	2.78
6756	7863	8.683615	CACACCTGTACATGTATATATATCGGT	58.316	37.037	9.18	6.04	0.00	4.69
6843	7950	7.868415	GTCGATTGAAGGCTGTTAGAGTTATAT	59.132	37.037	0.00	0.00	0.00	0.86
6857	7966	1.521681	CGGGAGGTCGATTGAAGGC	60.522	63.158	0.00	0.00	0.00	4.35
6874	7983	3.423123	GCACAGGTGAAAACTAATCGACG	60.423	47.826	3.10	0.00	0.00	5.12
6906	10185	7.921786	TGTGCAACTAACTAAAGCTATCATT	57.078	32.000	0.00	0.00	38.04	2.57
6916	10195	4.703897	AGCTGACTTGTGCAACTAACTAA	58.296	39.130	0.00	0.00	38.04	2.24
6917	10196	4.202212	TGAGCTGACTTGTGCAACTAACTA	60.202	41.667	0.00	0.00	38.04	2.24
6918	10197	3.134458	GAGCTGACTTGTGCAACTAACT	58.866	45.455	0.00	0.00	38.04	2.24
6919	10198	2.872245	TGAGCTGACTTGTGCAACTAAC	59.128	45.455	0.00	0.00	38.04	2.34
6957	10236	4.072131	TGAATGCCAAGGAACAGAAGTAC	58.928	43.478	0.00	0.00	0.00	2.73
6958	10237	4.365514	TGAATGCCAAGGAACAGAAGTA	57.634	40.909	0.00	0.00	0.00	2.24
6959	10238	3.228188	TGAATGCCAAGGAACAGAAGT	57.772	42.857	0.00	0.00	0.00	3.01
6960	10239	4.796038	AATGAATGCCAAGGAACAGAAG	57.204	40.909	0.00	0.00	0.00	2.85
7023	10313	4.569966	CCGAAATCAAGAGTGAGATCCTTG	59.430	45.833	0.00	0.00	37.14	3.61
7035	10326	4.191544	CCTACAGAATGCCGAAATCAAGA	58.808	43.478	0.00	0.00	42.53	3.02
7049	10340	3.888930	CCCTTTTGAAACAGCCTACAGAA	59.111	43.478	0.00	0.00	0.00	3.02
7297	11012	8.991275	AGGATTGCTTTTCAAATCCCATTAATA	58.009	29.630	10.13	0.00	38.34	0.98
7629	11704	9.605275	TTGGATAGAGAACTGACTGAAATATTG	57.395	33.333	0.00	0.00	0.00	1.90
7653	11728	2.029244	CGTATTCAACGTGCCTAGCTTG	59.971	50.000	0.00	0.00	46.72	4.01
7866	11951	4.703379	ATTTTGGCATTTTGTTCTCCCA	57.297	36.364	0.00	0.00	0.00	4.37
8017	12115	3.369471	GGCATCAACAACCTAGCTAGTCA	60.369	47.826	19.31	0.00	0.00	3.41
8054	12152	2.680841	GGCAGCACAAACATAATACCGA	59.319	45.455	0.00	0.00	0.00	4.69
8185	12288	1.941999	GCAAGCATCCTGCCTGTTCC	61.942	60.000	0.00	0.00	46.52	3.62
8212	12315	0.179176	CTGCGAGTCTGAAGACCTCG	60.179	60.000	19.22	19.22	45.85	4.63
8295	12398	3.771479	ACCACTCTAGCATTGAGATGTCA	59.229	43.478	7.47	0.00	35.63	3.58
8296	12399	4.399004	ACCACTCTAGCATTGAGATGTC	57.601	45.455	7.47	0.00	35.63	3.06
8327	12562	2.684881	CCAAACACTCTTGCAGAACACT	59.315	45.455	0.00	0.00	0.00	3.55
8368	12605	6.380079	AGGACAATTCAGATACCAGTTTCT	57.620	37.500	0.00	0.00	0.00	2.52
8375	12613	7.654116	GCTACTCTTAAGGACAATTCAGATACC	59.346	40.741	1.85	0.00	0.00	2.73
8432	12678	5.368145	TCTTTGGATGACACTACATATGCC	58.632	41.667	1.58	0.00	0.00	4.40
8435	12681	6.158695	AGGGTTCTTTGGATGACACTACATAT	59.841	38.462	0.00	0.00	0.00	1.78
8496	12745	8.015658	GCAAGTACTTCGTTCAATTCAAGTAAT	58.984	33.333	4.77	0.00	34.04	1.89
8507	12756	7.386573	TCAATGAAATAGCAAGTACTTCGTTCA	59.613	33.333	4.77	10.86	0.00	3.18
8509	12758	7.667043	TCAATGAAATAGCAAGTACTTCGTT	57.333	32.000	4.77	2.71	0.00	3.85
8510	12759	7.849804	ATCAATGAAATAGCAAGTACTTCGT	57.150	32.000	4.77	0.00	0.00	3.85
8531	12780	5.529581	TGAGACATATGCGGTCTTTATCA	57.470	39.130	1.58	0.00	45.21	2.15
8541	12790	2.353323	CCCCATGATGAGACATATGCG	58.647	52.381	1.58	0.00	0.00	4.73
8714	12968	6.231951	ACTCATGAGAGATGAATATTGCAGG	58.768	40.000	29.27	0.00	44.98	4.85
8764	13018	5.848286	ATATATCCTTGGTGCCAATCAGA	57.152	39.130	3.91	3.03	35.20	3.27
8780	13036	9.013229	TCACATGTTTGCCATCCTTTATATATC	57.987	33.333	0.00	0.00	0.00	1.63
8786	13042	4.021544	GGTTCACATGTTTGCCATCCTTTA	60.022	41.667	0.00	0.00	0.00	1.85
8787	13043	3.244181	GGTTCACATGTTTGCCATCCTTT	60.244	43.478	0.00	0.00	0.00	3.11
8788	13044	2.299867	GGTTCACATGTTTGCCATCCTT	59.700	45.455	0.00	0.00	0.00	3.36
8789	13045	1.895131	GGTTCACATGTTTGCCATCCT	59.105	47.619	0.00	0.00	0.00	3.24
8881	13140	4.135153	CTGCGTGCCGAGCCTAGT	62.135	66.667	0.00	0.00	0.00	2.57
8893	13152	2.417933	GCAAAGAGATTGTGATCTGCGT	59.582	45.455	0.00	0.00	42.66	5.24
8912	13171	2.419673	CACACAAACTGACTCACAAGCA	59.580	45.455	0.00	0.00	0.00	3.91
8913	13172	2.223340	CCACACAAACTGACTCACAAGC	60.223	50.000	0.00	0.00	0.00	4.01
8951	13210	3.117776	TGCAGCTCATTATCAGGGTTGAT	60.118	43.478	0.00	0.00	45.77	2.57
8953	13212	2.646930	TGCAGCTCATTATCAGGGTTG	58.353	47.619	0.00	0.00	0.00	3.77
8957	13235	2.860009	ACCATGCAGCTCATTATCAGG	58.140	47.619	0.00	0.00	31.79	3.86
9042	13320	7.764695	AAAGAAAAGTTTGAACCATAAACGG	57.235	32.000	0.00	0.00	41.61	4.44
9046	13324	9.936759	ACTCAAAAAGAAAAGTTTGAACCATAA	57.063	25.926	0.00	0.00	41.79	1.90
9067	13345	7.634671	ATCTAAACATGCATGATCAACTCAA	57.365	32.000	32.75	9.08	37.44	3.02
9094	13372	9.492973	CTTTCCATCATTTTGACCTTTTATTGT	57.507	29.630	0.00	0.00	0.00	2.71
9095	13373	8.938906	CCTTTCCATCATTTTGACCTTTTATTG	58.061	33.333	0.00	0.00	0.00	1.90
9097	13375	8.206126	ACCTTTCCATCATTTTGACCTTTTAT	57.794	30.769	0.00	0.00	0.00	1.40
9098	13376	7.610580	ACCTTTCCATCATTTTGACCTTTTA	57.389	32.000	0.00	0.00	0.00	1.52
9099	13377	6.499106	ACCTTTCCATCATTTTGACCTTTT	57.501	33.333	0.00	0.00	0.00	2.27
9153	13437	5.065914	ACTAGTATACTATCGTTTGCCCGA	58.934	41.667	12.98	0.00	41.73	5.14
9155	13439	7.678947	TCTACTAGTATACTATCGTTTGCCC	57.321	40.000	12.98	0.00	0.00	5.36
9172	13456	2.476873	ACGCACGAGCATTCTACTAG	57.523	50.000	5.50	0.00	42.27	2.57
9173	13457	2.526077	CAACGCACGAGCATTCTACTA	58.474	47.619	5.50	0.00	42.27	1.82
9174	13458	1.350193	CAACGCACGAGCATTCTACT	58.650	50.000	5.50	0.00	42.27	2.57
9175	13459	0.247301	GCAACGCACGAGCATTCTAC	60.247	55.000	5.50	0.00	42.27	2.59
9176	13460	0.389817	AGCAACGCACGAGCATTCTA	60.390	50.000	5.50	0.00	42.27	2.10
9177	13461	0.389817	TAGCAACGCACGAGCATTCT	60.390	50.000	5.50	0.00	42.27	2.40
9178	13462	0.247301	GTAGCAACGCACGAGCATTC	60.247	55.000	5.50	0.00	42.27	2.67
9179	13463	1.787847	GTAGCAACGCACGAGCATT	59.212	52.632	5.50	0.00	42.27	3.56
9190	13474	4.600012	ATGCATTGTAACTCGTAGCAAC	57.400	40.909	0.00	0.00	33.91	4.17
9192	13476	6.729391	TTTTATGCATTGTAACTCGTAGCA	57.271	33.333	3.54	0.00	34.78	3.49
9226	13510	9.449719	ACCTTGAAGACGATCTTATTAATTTGT	57.550	29.630	0.00	0.00	36.73	2.83
9227	13511	9.708222	CACCTTGAAGACGATCTTATTAATTTG	57.292	33.333	0.00	0.00	36.73	2.32
9228	13512	9.667107	TCACCTTGAAGACGATCTTATTAATTT	57.333	29.630	0.00	0.00	36.73	1.82
9229	13513	9.667107	TTCACCTTGAAGACGATCTTATTAATT	57.333	29.630	0.00	0.00	36.73	1.40
9230	13514	9.099454	GTTCACCTTGAAGACGATCTTATTAAT	57.901	33.333	0.00	0.00	36.73	1.40
9231	13515	7.548075	GGTTCACCTTGAAGACGATCTTATTAA	59.452	37.037	0.00	0.00	36.73	1.40
9232	13516	7.039882	GGTTCACCTTGAAGACGATCTTATTA	58.960	38.462	0.00	0.00	36.73	0.98
9233	13517	5.875359	GGTTCACCTTGAAGACGATCTTATT	59.125	40.000	0.00	0.00	36.73	1.40
9234	13518	5.187967	AGGTTCACCTTGAAGACGATCTTAT	59.812	40.000	0.00	0.00	46.09	1.73
9235	13519	4.527038	AGGTTCACCTTGAAGACGATCTTA	59.473	41.667	0.00	0.00	46.09	2.10
9236	13520	3.325135	AGGTTCACCTTGAAGACGATCTT	59.675	43.478	0.00	0.00	46.09	2.40
9237	13521	2.900546	AGGTTCACCTTGAAGACGATCT	59.099	45.455	0.00	0.00	46.09	2.75
9238	13522	3.320673	AGGTTCACCTTGAAGACGATC	57.679	47.619	0.00	0.00	46.09	3.69
9250	13534	8.749354	ACATATGGAAGAAAAATAAGGTTCACC	58.251	33.333	7.80	0.00	0.00	4.02
9251	13535	9.788960	GACATATGGAAGAAAAATAAGGTTCAC	57.211	33.333	7.80	0.00	0.00	3.18
9252	13536	8.966868	GGACATATGGAAGAAAAATAAGGTTCA	58.033	33.333	7.80	0.00	0.00	3.18
9253	13537	8.129211	CGGACATATGGAAGAAAAATAAGGTTC	58.871	37.037	7.80	0.00	0.00	3.62
9254	13538	7.068226	CCGGACATATGGAAGAAAAATAAGGTT	59.932	37.037	7.80	0.00	0.00	3.50
9255	13539	6.546034	CCGGACATATGGAAGAAAAATAAGGT	59.454	38.462	7.80	0.00	0.00	3.50
9256	13540	6.016276	CCCGGACATATGGAAGAAAAATAAGG	60.016	42.308	0.73	0.00	0.00	2.69
9257	13541	6.515035	GCCCGGACATATGGAAGAAAAATAAG	60.515	42.308	0.73	0.00	0.00	1.73
9258	13542	5.300792	GCCCGGACATATGGAAGAAAAATAA	59.699	40.000	0.73	0.00	0.00	1.40
9259	13543	4.825085	GCCCGGACATATGGAAGAAAAATA	59.175	41.667	0.73	0.00	0.00	1.40
9260	13544	3.636764	GCCCGGACATATGGAAGAAAAAT	59.363	43.478	0.73	0.00	0.00	1.82
9261	13545	3.020984	GCCCGGACATATGGAAGAAAAA	58.979	45.455	0.73	0.00	0.00	1.94
9262	13546	2.025793	TGCCCGGACATATGGAAGAAAA	60.026	45.455	0.73	0.00	0.00	2.29
9263	13547	1.562008	TGCCCGGACATATGGAAGAAA	59.438	47.619	0.73	0.00	0.00	2.52
9264	13548	1.208706	TGCCCGGACATATGGAAGAA	58.791	50.000	0.73	0.00	0.00	2.52
9265	13549	1.072173	CATGCCCGGACATATGGAAGA	59.928	52.381	1.74	0.00	0.00	2.87
9266	13550	1.202806	ACATGCCCGGACATATGGAAG	60.203	52.381	1.74	0.00	0.00	3.46
9267	13551	0.843309	ACATGCCCGGACATATGGAA	59.157	50.000	1.74	0.00	0.00	3.53
9268	13552	0.843309	AACATGCCCGGACATATGGA	59.157	50.000	1.74	0.00	0.00	3.41
9269	13553	1.238439	GAACATGCCCGGACATATGG	58.762	55.000	1.74	0.00	0.00	2.74
9270	13554	0.867746	CGAACATGCCCGGACATATG	59.132	55.000	1.74	0.00	0.00	1.78
9271	13555	3.305709	CGAACATGCCCGGACATAT	57.694	52.632	1.74	0.00	0.00	1.78
9272	13556	4.846551	CGAACATGCCCGGACATA	57.153	55.556	1.74	0.00	0.00	2.29
9277	13561	2.124736	ATGTCCGAACATGCCCGG	60.125	61.111	17.36	17.36	44.51	5.73
9278	13562	1.024046	TTGATGTCCGAACATGCCCG	61.024	55.000	0.00	0.00	46.20	6.13
9279	13563	1.135402	GTTTGATGTCCGAACATGCCC	60.135	52.381	0.00	0.00	46.20	5.36
9280	13564	1.465689	CGTTTGATGTCCGAACATGCC	60.466	52.381	0.00	0.00	46.20	4.40
9281	13565	1.465689	CCGTTTGATGTCCGAACATGC	60.466	52.381	0.00	0.00	46.20	4.06
9282	13566	1.130373	CCCGTTTGATGTCCGAACATG	59.870	52.381	0.00	0.00	46.20	3.21
9284	13568	1.231958	GCCCGTTTGATGTCCGAACA	61.232	55.000	0.00	0.00	38.76	3.18
9285	13569	1.500396	GCCCGTTTGATGTCCGAAC	59.500	57.895	0.00	0.00	36.10	3.95
9286	13570	2.030401	CGCCCGTTTGATGTCCGAA	61.030	57.895	0.00	0.00	0.00	4.30
9287	13571	2.433491	CGCCCGTTTGATGTCCGA	60.433	61.111	0.00	0.00	0.00	4.55
9288	13572	2.736682	GACGCCCGTTTGATGTCCG	61.737	63.158	0.00	0.00	0.00	4.79
9289	13573	2.736682	CGACGCCCGTTTGATGTCC	61.737	63.158	0.00	0.00	0.00	4.02
9290	13574	2.776072	CGACGCCCGTTTGATGTC	59.224	61.111	0.00	0.00	0.00	3.06
9291	13575	3.419759	GCGACGCCCGTTTGATGT	61.420	61.111	9.14	0.00	41.15	3.06
9292	13576	4.160635	GGCGACGCCCGTTTGATG	62.161	66.667	28.74	0.00	44.06	3.07
9302	13586	1.006825	GGTTGAATTTTGGGCGACGC	61.007	55.000	12.43	12.43	0.00	5.19
9303	13587	0.312416	TGGTTGAATTTTGGGCGACG	59.688	50.000	0.00	0.00	0.00	5.12
9304	13588	2.606108	GATGGTTGAATTTTGGGCGAC	58.394	47.619	0.00	0.00	0.00	5.19
9305	13589	1.548269	GGATGGTTGAATTTTGGGCGA	59.452	47.619	0.00	0.00	0.00	5.54
9306	13590	1.735369	CGGATGGTTGAATTTTGGGCG	60.735	52.381	0.00	0.00	0.00	6.13
9307	13591	1.405391	CCGGATGGTTGAATTTTGGGC	60.405	52.381	0.00	0.00	0.00	5.36
9308	13592	2.094234	GTCCGGATGGTTGAATTTTGGG	60.094	50.000	7.81	0.00	36.30	4.12
9309	13593	2.560542	TGTCCGGATGGTTGAATTTTGG	59.439	45.455	7.81	0.00	36.30	3.28
9310	13594	3.932545	TGTCCGGATGGTTGAATTTTG	57.067	42.857	7.81	0.00	36.30	2.44
9311	13595	5.478407	GAAATGTCCGGATGGTTGAATTTT	58.522	37.500	7.81	0.00	36.30	1.82
9312	13596	4.380444	CGAAATGTCCGGATGGTTGAATTT	60.380	41.667	7.81	5.83	36.30	1.82
9313	13597	3.128589	CGAAATGTCCGGATGGTTGAATT	59.871	43.478	7.81	0.00	36.30	2.17
9314	13598	2.682856	CGAAATGTCCGGATGGTTGAAT	59.317	45.455	7.81	0.00	36.30	2.57
9315	13599	2.080693	CGAAATGTCCGGATGGTTGAA	58.919	47.619	7.81	0.00	36.30	2.69
9316	13600	1.732941	CGAAATGTCCGGATGGTTGA	58.267	50.000	7.81	0.00	36.30	3.18
9324	13608	2.112815	GGAAGCCCGAAATGTCCGG	61.113	63.158	0.00	0.00	46.10	5.14
9325	13609	2.112815	GGGAAGCCCGAAATGTCCG	61.113	63.158	0.00	0.00	32.13	4.79
9326	13610	3.920031	GGGAAGCCCGAAATGTCC	58.080	61.111	0.00	0.00	32.13	4.02
9335	13619	3.059982	GCTGGTTTTGGGAAGCCC	58.940	61.111	0.00	0.00	45.71	5.19
9337	13621	2.931068	CGGGCTGGTTTTGGGAAGC	61.931	63.158	0.00	0.00	34.86	3.86
9338	13622	0.250989	TACGGGCTGGTTTTGGGAAG	60.251	55.000	0.00	0.00	0.00	3.46
9339	13623	0.406361	ATACGGGCTGGTTTTGGGAA	59.594	50.000	0.00	0.00	0.00	3.97
9340	13624	0.322997	CATACGGGCTGGTTTTGGGA	60.323	55.000	0.00	0.00	0.00	4.37
9341	13625	0.610785	ACATACGGGCTGGTTTTGGG	60.611	55.000	0.00	0.00	0.00	4.12
9342	13626	0.525761	CACATACGGGCTGGTTTTGG	59.474	55.000	0.00	0.00	0.00	3.28
9343	13627	0.525761	CCACATACGGGCTGGTTTTG	59.474	55.000	0.00	0.00	0.00	2.44
9344	13628	0.610785	CCCACATACGGGCTGGTTTT	60.611	55.000	0.00	0.00	40.07	2.43
9345	13629	1.001393	CCCACATACGGGCTGGTTT	60.001	57.895	0.00	0.00	40.07	3.27
9346	13630	1.921346	TCCCACATACGGGCTGGTT	60.921	57.895	0.00	0.00	46.92	3.67
9347	13631	2.285069	TCCCACATACGGGCTGGT	60.285	61.111	0.00	0.00	46.92	4.00
9348	13632	2.189521	GTCCCACATACGGGCTGG	59.810	66.667	0.00	0.00	46.92	4.85
9349	13633	1.153369	CTGTCCCACATACGGGCTG	60.153	63.158	0.00	0.00	46.92	4.85
9350	13634	0.907704	TTCTGTCCCACATACGGGCT	60.908	55.000	0.00	0.00	46.92	5.19
9351	13635	0.035820	TTTCTGTCCCACATACGGGC	60.036	55.000	0.00	0.00	46.92	6.13
9353	13637	4.065088	CCATATTTCTGTCCCACATACGG	58.935	47.826	0.00	0.00	0.00	4.02
9354	13638	4.703897	ACCATATTTCTGTCCCACATACG	58.296	43.478	0.00	0.00	0.00	3.06
9355	13639	5.885912	ACAACCATATTTCTGTCCCACATAC	59.114	40.000	0.00	0.00	0.00	2.39
9356	13640	6.073447	ACAACCATATTTCTGTCCCACATA	57.927	37.500	0.00	0.00	0.00	2.29
9357	13641	4.934356	ACAACCATATTTCTGTCCCACAT	58.066	39.130	0.00	0.00	0.00	3.21
9358	13642	4.331968	GACAACCATATTTCTGTCCCACA	58.668	43.478	0.00	0.00	33.57	4.17
9359	13643	4.965119	GACAACCATATTTCTGTCCCAC	57.035	45.455	0.00	0.00	33.57	4.61
9363	13647	3.621715	GTCCGGACAACCATATTTCTGTC	59.378	47.826	29.75	0.00	37.95	3.51
9364	13648	3.263425	AGTCCGGACAACCATATTTCTGT	59.737	43.478	35.00	7.40	35.59	3.41
9365	13649	3.873910	AGTCCGGACAACCATATTTCTG	58.126	45.455	35.00	0.00	35.59	3.02
9366	13650	5.602978	AGATAGTCCGGACAACCATATTTCT	59.397	40.000	35.00	18.61	35.59	2.52
9367	13651	5.696724	CAGATAGTCCGGACAACCATATTTC	59.303	44.000	35.00	16.80	35.59	2.17
9368	13652	5.611374	CAGATAGTCCGGACAACCATATTT	58.389	41.667	35.00	16.13	35.59	1.40
9369	13653	4.503296	GCAGATAGTCCGGACAACCATATT	60.503	45.833	35.00	15.20	35.59	1.28
9370	13654	3.006967	GCAGATAGTCCGGACAACCATAT	59.993	47.826	35.00	22.77	35.59	1.78
9371	13655	2.364324	GCAGATAGTCCGGACAACCATA	59.636	50.000	35.00	19.09	35.59	2.74
9372	13656	1.139058	GCAGATAGTCCGGACAACCAT	59.861	52.381	35.00	21.41	35.59	3.55
9373	13657	0.535335	GCAGATAGTCCGGACAACCA	59.465	55.000	35.00	17.75	35.59	3.67
9374	13658	0.179081	GGCAGATAGTCCGGACAACC	60.179	60.000	35.00	21.93	0.00	3.77
9375	13659	0.535335	TGGCAGATAGTCCGGACAAC	59.465	55.000	35.00	23.77	0.00	3.32
9376	13660	1.138859	CATGGCAGATAGTCCGGACAA	59.861	52.381	35.00	10.92	0.00	3.18
9377	13661	0.752658	CATGGCAGATAGTCCGGACA	59.247	55.000	35.00	21.39	0.00	4.02
9378	13662	0.753262	ACATGGCAGATAGTCCGGAC	59.247	55.000	27.67	27.67	0.00	4.79
9379	13663	1.496060	AACATGGCAGATAGTCCGGA	58.504	50.000	0.00	0.00	0.00	5.14
9380	13664	3.259374	AGATAACATGGCAGATAGTCCGG	59.741	47.826	0.00	0.00	0.00	5.14
9381	13665	4.489810	GAGATAACATGGCAGATAGTCCG	58.510	47.826	0.00	0.00	0.00	4.79
9382	13666	4.284490	TGGAGATAACATGGCAGATAGTCC	59.716	45.833	0.00	0.00	0.00	3.85
9383	13667	5.474578	TGGAGATAACATGGCAGATAGTC	57.525	43.478	0.00	0.00	0.00	2.59
9384	13668	5.130975	TGTTGGAGATAACATGGCAGATAGT	59.869	40.000	0.00	0.00	35.75	2.12
9385	13669	5.468072	GTGTTGGAGATAACATGGCAGATAG	59.532	44.000	0.00	0.00	42.02	2.08
9386	13670	5.104569	TGTGTTGGAGATAACATGGCAGATA	60.105	40.000	0.00	0.00	42.02	1.98
9387	13671	4.202441	GTGTTGGAGATAACATGGCAGAT	58.798	43.478	0.00	0.00	42.02	2.90
9388	13672	3.008923	TGTGTTGGAGATAACATGGCAGA	59.991	43.478	0.00	0.00	42.02	4.26
9389	13673	3.346315	TGTGTTGGAGATAACATGGCAG	58.654	45.455	0.00	0.00	42.02	4.85
9390	13674	3.431673	TGTGTTGGAGATAACATGGCA	57.568	42.857	0.00	0.00	42.02	4.92
9391	13675	4.158394	ACAATGTGTTGGAGATAACATGGC	59.842	41.667	0.00	0.00	42.02	4.40
9392	13676	5.163622	GGACAATGTGTTGGAGATAACATGG	60.164	44.000	0.00	0.00	42.02	3.66
9393	13677	5.163622	GGGACAATGTGTTGGAGATAACATG	60.164	44.000	0.00	0.00	42.02	3.21
9394	13678	4.949856	GGGACAATGTGTTGGAGATAACAT	59.050	41.667	0.00	0.00	42.02	2.71
9395	13679	4.202514	TGGGACAATGTGTTGGAGATAACA	60.203	41.667	0.00	0.00	39.70	2.41
9396	13680	4.331968	TGGGACAATGTGTTGGAGATAAC	58.668	43.478	0.00	0.00	39.70	1.89
9397	13681	4.649267	TGGGACAATGTGTTGGAGATAA	57.351	40.909	0.00	0.00	39.70	1.75
9412	13696	3.949113	GGTAAGTTTTCTGTGTTGGGACA	59.051	43.478	0.00	0.00	0.00	4.02
9413	13697	3.317149	GGGTAAGTTTTCTGTGTTGGGAC	59.683	47.826	0.00	0.00	0.00	4.46
9414	13698	3.558033	GGGTAAGTTTTCTGTGTTGGGA	58.442	45.455	0.00	0.00	0.00	4.37
9415	13699	2.626266	GGGGTAAGTTTTCTGTGTTGGG	59.374	50.000	0.00	0.00	0.00	4.12
9416	13700	2.626266	GGGGGTAAGTTTTCTGTGTTGG	59.374	50.000	0.00	0.00	0.00	3.77
9417	13701	3.292460	TGGGGGTAAGTTTTCTGTGTTG	58.708	45.455	0.00	0.00	0.00	3.33
9418	13702	3.673543	TGGGGGTAAGTTTTCTGTGTT	57.326	42.857	0.00	0.00	0.00	3.32
9419	13703	3.895704	ATGGGGGTAAGTTTTCTGTGT	57.104	42.857	0.00	0.00	0.00	3.72
9420	13704	4.155280	CGTAATGGGGGTAAGTTTTCTGTG	59.845	45.833	0.00	0.00	0.00	3.66
9421	13705	4.329392	CGTAATGGGGGTAAGTTTTCTGT	58.671	43.478	0.00	0.00	0.00	3.41
9422	13706	3.128068	GCGTAATGGGGGTAAGTTTTCTG	59.872	47.826	0.00	0.00	0.00	3.02
9423	13707	3.244981	TGCGTAATGGGGGTAAGTTTTCT	60.245	43.478	0.00	0.00	0.00	2.52
9424	13708	3.083293	TGCGTAATGGGGGTAAGTTTTC	58.917	45.455	0.00	0.00	0.00	2.29
9425	13709	2.821378	GTGCGTAATGGGGGTAAGTTTT	59.179	45.455	0.00	0.00	0.00	2.43
9426	13710	2.040679	AGTGCGTAATGGGGGTAAGTTT	59.959	45.455	0.00	0.00	0.00	2.66
9427	13711	1.631898	AGTGCGTAATGGGGGTAAGTT	59.368	47.619	0.00	0.00	0.00	2.66
9428	13712	1.208776	GAGTGCGTAATGGGGGTAAGT	59.791	52.381	0.00	0.00	0.00	2.24
9429	13713	1.485066	AGAGTGCGTAATGGGGGTAAG	59.515	52.381	0.00	0.00	0.00	2.34
9430	13714	1.575419	AGAGTGCGTAATGGGGGTAA	58.425	50.000	0.00	0.00	0.00	2.85
9431	13715	1.483415	GAAGAGTGCGTAATGGGGGTA	59.517	52.381	0.00	0.00	0.00	3.69
9432	13716	0.252197	GAAGAGTGCGTAATGGGGGT	59.748	55.000	0.00	0.00	0.00	4.95
9433	13717	0.463833	GGAAGAGTGCGTAATGGGGG	60.464	60.000	0.00	0.00	0.00	5.40
9434	13718	0.463833	GGGAAGAGTGCGTAATGGGG	60.464	60.000	0.00	0.00	0.00	4.96
9435	13719	0.541863	AGGGAAGAGTGCGTAATGGG	59.458	55.000	0.00	0.00	0.00	4.00
9436	13720	2.403252	AAGGGAAGAGTGCGTAATGG	57.597	50.000	0.00	0.00	0.00	3.16
9437	13721	3.751175	TGAAAAGGGAAGAGTGCGTAATG	59.249	43.478	0.00	0.00	0.00	1.90
9438	13722	4.015872	TGAAAAGGGAAGAGTGCGTAAT	57.984	40.909	0.00	0.00	0.00	1.89
9439	13723	3.478857	TGAAAAGGGAAGAGTGCGTAA	57.521	42.857	0.00	0.00	0.00	3.18
9440	13724	3.244422	ACATGAAAAGGGAAGAGTGCGTA	60.244	43.478	0.00	0.00	0.00	4.42
9441	13725	2.154462	CATGAAAAGGGAAGAGTGCGT	58.846	47.619	0.00	0.00	0.00	5.24
9442	13726	2.154462	ACATGAAAAGGGAAGAGTGCG	58.846	47.619	0.00	0.00	0.00	5.34
9443	13727	2.160417	CGACATGAAAAGGGAAGAGTGC	59.840	50.000	0.00	0.00	0.00	4.40
9444	13728	2.744202	CCGACATGAAAAGGGAAGAGTG	59.256	50.000	0.00	0.00	0.00	3.51
9445	13729	2.637872	TCCGACATGAAAAGGGAAGAGT	59.362	45.455	0.00	0.00	0.00	3.24
9446	13730	3.003480	GTCCGACATGAAAAGGGAAGAG	58.997	50.000	0.00	0.00	0.00	2.85
9447	13731	2.290071	GGTCCGACATGAAAAGGGAAGA	60.290	50.000	0.00	0.00	0.00	2.87
9448	13732	2.084546	GGTCCGACATGAAAAGGGAAG	58.915	52.381	0.00	0.00	0.00	3.46
9449	13733	1.271707	GGGTCCGACATGAAAAGGGAA	60.272	52.381	0.00	0.00	0.00	3.97
9450	13734	0.326927	GGGTCCGACATGAAAAGGGA	59.673	55.000	0.00	0.00	0.00	4.20
9451	13735	0.328258	AGGGTCCGACATGAAAAGGG	59.672	55.000	0.00	0.00	0.00	3.95
9452	13736	1.679032	GGAGGGTCCGACATGAAAAGG	60.679	57.143	0.00	0.00	0.00	3.11
9453	13737	1.679032	GGGAGGGTCCGACATGAAAAG	60.679	57.143	0.00	0.00	37.43	2.27
9454	13738	0.326927	GGGAGGGTCCGACATGAAAA	59.673	55.000	0.00	0.00	37.43	2.29
9455	13739	1.559065	GGGGAGGGTCCGACATGAAA	61.559	60.000	0.00	0.00	37.43	2.69
9456	13740	1.993391	GGGGAGGGTCCGACATGAA	60.993	63.158	0.00	0.00	37.43	2.57
9457	13741	2.365105	GGGGAGGGTCCGACATGA	60.365	66.667	0.00	0.00	37.43	3.07
9458	13742	1.972660	GAAGGGGAGGGTCCGACATG	61.973	65.000	0.00	0.00	37.43	3.21
9459	13743	1.689582	GAAGGGGAGGGTCCGACAT	60.690	63.158	0.00	0.00	37.43	3.06
9460	13744	2.284405	GAAGGGGAGGGTCCGACA	60.284	66.667	0.00	0.00	37.43	4.35
9461	13745	3.082055	GGAAGGGGAGGGTCCGAC	61.082	72.222	0.00	0.00	37.43	4.79
9462	13746	4.410033	GGGAAGGGGAGGGTCCGA	62.410	72.222	0.00	0.00	37.43	4.55
9463	13747	4.733725	TGGGAAGGGGAGGGTCCG	62.734	72.222	0.00	0.00	37.43	4.79
9464	13748	3.015753	GTGGGAAGGGGAGGGTCC	61.016	72.222	0.00	0.00	35.23	4.46
9465	13749	1.541620	AAGTGGGAAGGGGAGGGTC	60.542	63.158	0.00	0.00	0.00	4.46
9466	13750	1.852626	CAAGTGGGAAGGGGAGGGT	60.853	63.158	0.00	0.00	0.00	4.34
9467	13751	2.616458	CCAAGTGGGAAGGGGAGGG	61.616	68.421	0.00	0.00	40.01	4.30
9468	13752	1.435346	AACCAAGTGGGAAGGGGAGG	61.435	60.000	1.69	0.00	41.15	4.30
9469	13753	0.482887	AAACCAAGTGGGAAGGGGAG	59.517	55.000	1.69	0.00	41.15	4.30
9470	13754	0.481128	GAAACCAAGTGGGAAGGGGA	59.519	55.000	1.69	0.00	41.15	4.81
9471	13755	0.541998	GGAAACCAAGTGGGAAGGGG	60.542	60.000	1.69	0.00	41.15	4.79
9472	13756	3.051617	GGAAACCAAGTGGGAAGGG	57.948	57.895	1.69	0.00	41.15	3.95
9492	13776	1.152383	GAGAAATGTCCCGCTACGGC	61.152	60.000	0.00	0.00	46.86	5.68
9494	13778	1.480219	GCGAGAAATGTCCCGCTACG	61.480	60.000	4.28	0.00	43.75	3.51
9495	13779	2.298593	GCGAGAAATGTCCCGCTAC	58.701	57.895	4.28	0.00	43.75	3.58
9496	13780	4.827481	GCGAGAAATGTCCCGCTA	57.173	55.556	4.28	0.00	43.75	4.26
9498	13782	2.464459	CCAGCGAGAAATGTCCCGC	61.464	63.158	3.15	3.15	47.00	6.13
9499	13783	0.807667	CTCCAGCGAGAAATGTCCCG	60.808	60.000	0.00	0.00	38.52	5.14
9500	13784	1.092345	GCTCCAGCGAGAAATGTCCC	61.092	60.000	0.00	0.00	38.52	4.46
9501	13785	2.388347	GCTCCAGCGAGAAATGTCC	58.612	57.895	0.00	0.00	38.52	4.02
9523	13807	4.607955	TGCGTCATCTCGTATTAAAGGAG	58.392	43.478	0.00	0.00	40.73	3.69
9524	13808	4.642445	TGCGTCATCTCGTATTAAAGGA	57.358	40.909	0.00	0.00	0.00	3.36
9525	13809	5.907197	ATTGCGTCATCTCGTATTAAAGG	57.093	39.130	0.00	0.00	0.00	3.11
9526	13810	6.201044	AGGAATTGCGTCATCTCGTATTAAAG	59.799	38.462	0.00	0.00	0.00	1.85
9527	13811	6.046593	AGGAATTGCGTCATCTCGTATTAAA	58.953	36.000	0.00	0.00	0.00	1.52
9528	13812	5.597806	AGGAATTGCGTCATCTCGTATTAA	58.402	37.500	0.00	0.00	0.00	1.40
9529	13813	5.196341	AGGAATTGCGTCATCTCGTATTA	57.804	39.130	0.00	0.00	0.00	0.98
9530	13814	4.060038	AGGAATTGCGTCATCTCGTATT	57.940	40.909	0.00	0.00	0.00	1.89
9531	13815	3.735237	AGGAATTGCGTCATCTCGTAT	57.265	42.857	0.00	0.00	0.00	3.06
9532	13816	3.630769	ACTAGGAATTGCGTCATCTCGTA	59.369	43.478	0.00	0.00	0.00	3.43
9533	13817	2.427453	ACTAGGAATTGCGTCATCTCGT	59.573	45.455	0.00	0.00	0.00	4.18
9534	13818	3.085443	ACTAGGAATTGCGTCATCTCG	57.915	47.619	0.00	0.00	0.00	4.04
9535	13819	4.184629	ACAACTAGGAATTGCGTCATCTC	58.815	43.478	0.00	0.00	0.00	2.75
9536	13820	4.184629	GACAACTAGGAATTGCGTCATCT	58.815	43.478	0.00	0.00	0.00	2.90
9537	13821	3.932710	TGACAACTAGGAATTGCGTCATC	59.067	43.478	0.00	0.00	0.00	2.92
9538	13822	3.684788	GTGACAACTAGGAATTGCGTCAT	59.315	43.478	7.63	0.00	0.00	3.06
9539	13823	3.064207	GTGACAACTAGGAATTGCGTCA	58.936	45.455	0.00	1.52	0.00	4.35
9540	13824	3.064207	TGTGACAACTAGGAATTGCGTC	58.936	45.455	0.00	0.00	0.00	5.19
9541	13825	2.806244	GTGTGACAACTAGGAATTGCGT	59.194	45.455	0.00	0.00	0.00	5.24
9542	13826	2.159627	GGTGTGACAACTAGGAATTGCG	59.840	50.000	0.00	0.00	0.00	4.85
9543	13827	2.159627	CGGTGTGACAACTAGGAATTGC	59.840	50.000	0.00	0.00	0.00	3.56
9544	13828	3.399330	ACGGTGTGACAACTAGGAATTG	58.601	45.455	0.00	0.00	0.00	2.32
9545	13829	3.660865	GACGGTGTGACAACTAGGAATT	58.339	45.455	0.00	0.00	0.00	2.17
9546	13830	2.352421	CGACGGTGTGACAACTAGGAAT	60.352	50.000	0.00	0.00	0.00	3.01
9547	13831	1.001048	CGACGGTGTGACAACTAGGAA	60.001	52.381	0.00	0.00	0.00	3.36
9548	13832	0.594602	CGACGGTGTGACAACTAGGA	59.405	55.000	0.00	0.00	0.00	2.94
9549	13833	1.007336	GCGACGGTGTGACAACTAGG	61.007	60.000	0.00	0.00	0.00	3.02
9550	13834	0.318360	TGCGACGGTGTGACAACTAG	60.318	55.000	0.00	0.00	0.00	2.57
9551	13835	0.102663	TTGCGACGGTGTGACAACTA	59.897	50.000	0.00	0.00	0.00	2.24
9552	13836	0.531974	ATTGCGACGGTGTGACAACT	60.532	50.000	0.00	0.00	0.00	3.16
9553	13837	0.306533	AATTGCGACGGTGTGACAAC	59.693	50.000	0.00	0.00	0.00	3.32
9554	13838	0.584396	GAATTGCGACGGTGTGACAA	59.416	50.000	0.00	0.00	0.00	3.18
9555	13839	0.249699	AGAATTGCGACGGTGTGACA	60.250	50.000	0.00	0.00	0.00	3.58
9556	13840	0.438830	GAGAATTGCGACGGTGTGAC	59.561	55.000	0.00	0.00	0.00	3.67
9557	13841	1.006825	CGAGAATTGCGACGGTGTGA	61.007	55.000	0.00	0.00	0.00	3.58
9558	13842	1.006825	TCGAGAATTGCGACGGTGTG	61.007	55.000	0.00	0.00	32.09	3.82
9559	13843	0.108804	ATCGAGAATTGCGACGGTGT	60.109	50.000	0.00	0.00	40.94	4.16
9560	13844	1.517276	GTATCGAGAATTGCGACGGTG	59.483	52.381	0.00	0.00	40.94	4.94
9561	13845	1.404391	AGTATCGAGAATTGCGACGGT	59.596	47.619	0.00	0.00	40.94	4.83
9562	13846	2.121116	AGTATCGAGAATTGCGACGG	57.879	50.000	0.00	0.00	40.94	4.79
9563	13847	3.105937	TCAAGTATCGAGAATTGCGACG	58.894	45.455	14.87	0.00	40.94	5.12
9564	13848	5.232202	TGATTCAAGTATCGAGAATTGCGAC	59.768	40.000	14.87	8.79	40.94	5.19
9565	13849	5.232202	GTGATTCAAGTATCGAGAATTGCGA	59.768	40.000	14.87	6.92	42.48	5.10
9566	13850	5.233050	AGTGATTCAAGTATCGAGAATTGCG	59.767	40.000	14.87	0.00	32.51	4.85
9567	13851	6.036517	ACAGTGATTCAAGTATCGAGAATTGC	59.963	38.462	14.87	2.78	32.51	3.56
9568	13852	7.531280	ACAGTGATTCAAGTATCGAGAATTG	57.469	36.000	13.63	13.63	32.51	2.32

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.