Multiple sequence alignment - TraesCS2D01G316600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G316600 chr2D 100.000 2339 0 0 1 2339 405872686 405870348 0.000000e+00 4320.0
1 TraesCS2D01G316600 chr5D 98.601 858 12 0 1482 2339 428701660 428702517 0.000000e+00 1519.0
2 TraesCS2D01G316600 chr5D 83.658 257 27 8 1481 1725 428704287 428704034 6.500000e-56 228.0
3 TraesCS2D01G316600 chr2B 89.855 966 56 12 1 965 481202571 481201647 0.000000e+00 1203.0
4 TraesCS2D01G316600 chr2B 84.146 246 28 4 1482 1718 559129426 559129669 6.500000e-56 228.0
5 TraesCS2D01G316600 chr2B 87.156 109 11 3 480 588 490314768 490314873 1.140000e-23 121.0
6 TraesCS2D01G316600 chr2B 87.273 55 5 2 519 572 55663398 55663451 6.980000e-06 62.1
7 TraesCS2D01G316600 chr7D 98.537 547 4 4 1796 2339 557431180 557431725 0.000000e+00 963.0
8 TraesCS2D01G316600 chr7D 93.812 404 24 1 961 1363 158963589 158963992 7.150000e-170 606.0
9 TraesCS2D01G316600 chr7D 98.142 323 6 0 1482 1804 557417514 557417836 4.360000e-157 564.0
10 TraesCS2D01G316600 chr7D 81.287 171 30 1 448 616 598259282 598259112 1.130000e-28 137.0
11 TraesCS2D01G316600 chr2A 82.622 961 135 15 1 959 543985644 543984714 0.000000e+00 821.0
12 TraesCS2D01G316600 chr2A 91.045 402 36 0 961 1362 345541405 345541806 5.680000e-151 544.0
13 TraesCS2D01G316600 chr2A 90.714 140 13 0 1482 1621 10990120 10989981 1.100000e-43 187.0
14 TraesCS2D01G316600 chr2A 90.714 140 13 0 1482 1621 601329403 601329264 1.100000e-43 187.0
15 TraesCS2D01G316600 chr6D 92.289 402 29 2 961 1362 356157157 356156758 9.380000e-159 569.0
16 TraesCS2D01G316600 chr4D 91.872 406 32 1 961 1366 349921225 349921629 1.210000e-157 566.0
17 TraesCS2D01G316600 chr4D 92.000 50 2 2 524 572 25980849 25980801 4.170000e-08 69.4
18 TraesCS2D01G316600 chr4A 90.974 421 35 2 944 1361 472647137 472647557 4.360000e-157 564.0
19 TraesCS2D01G316600 chr4A 88.800 250 25 3 1922 2169 368126621 368126869 1.050000e-78 303.0
20 TraesCS2D01G316600 chr4A 84.426 244 27 6 1482 1716 368127670 368127429 1.810000e-56 230.0
21 TraesCS2D01G316600 chr3A 91.584 404 34 0 960 1363 260032485 260032082 2.030000e-155 558.0
22 TraesCS2D01G316600 chr3A 89.837 246 22 3 1926 2169 487452787 487453031 1.750000e-81 313.0
23 TraesCS2D01G316600 chr3A 83.908 87 9 4 484 565 712123475 712123389 6.930000e-11 78.7
24 TraesCS2D01G316600 chr1B 91.250 400 35 0 961 1360 201759800 201760199 1.580000e-151 545.0
25 TraesCS2D01G316600 chr1B 92.157 51 3 1 519 569 311405909 311405958 1.160000e-08 71.3
26 TraesCS2D01G316600 chr5A 90.709 409 37 1 963 1370 425004130 425003722 5.680000e-151 544.0
27 TraesCS2D01G316600 chr5A 91.304 69 6 0 497 565 468842765 468842833 6.880000e-16 95.3
28 TraesCS2D01G316600 chr1A 91.045 402 36 0 961 1362 211848997 211848596 5.680000e-151 544.0
29 TraesCS2D01G316600 chr1A 90.141 142 14 0 1480 1621 75803819 75803678 3.970000e-43 185.0
30 TraesCS2D01G316600 chr7A 83.526 346 55 2 1955 2299 709978694 709979038 2.900000e-84 322.0
31 TraesCS2D01G316600 chr7A 82.158 241 30 10 1476 1706 709980064 709979827 6.600000e-46 195.0
32 TraesCS2D01G316600 chr3B 93.878 49 2 1 524 572 225966054 225966007 3.220000e-09 73.1
33 TraesCS2D01G316600 chr7B 84.211 76 8 3 504 575 230353691 230353616 1.160000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G316600 chr2D 405870348 405872686 2338 True 4320 4320 100.000 1 2339 1 chr2D.!!$R1 2338
1 TraesCS2D01G316600 chr5D 428701660 428702517 857 False 1519 1519 98.601 1482 2339 1 chr5D.!!$F1 857
2 TraesCS2D01G316600 chr2B 481201647 481202571 924 True 1203 1203 89.855 1 965 1 chr2B.!!$R1 964
3 TraesCS2D01G316600 chr7D 557431180 557431725 545 False 963 963 98.537 1796 2339 1 chr7D.!!$F3 543
4 TraesCS2D01G316600 chr2A 543984714 543985644 930 True 821 821 82.622 1 959 1 chr2A.!!$R2 958

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
175 176 0.315251 GTTGCACTTCCCAGCTTTCC 59.685 55.0 0.0 0.0 0.0 3.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1444 1447 0.171455 GACTCGCTACAGGAGGTGTG 59.829 60.0 0.0 0.0 40.69 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 3.073209 ACTCTTGAGTTTCTCCTTTCCCC 59.927 47.826 0.00 0.00 0.00 4.81
48 49 1.628846 TCCTTTCCCCTCTTCCTTTCG 59.371 52.381 0.00 0.00 0.00 3.46
114 115 4.702131 ACATTTTCCCTTTTCTCTCCATCG 59.298 41.667 0.00 0.00 0.00 3.84
115 116 3.350219 TTTCCCTTTTCTCTCCATCGG 57.650 47.619 0.00 0.00 0.00 4.18
122 123 2.827800 TTCTCTCCATCGGCATCATC 57.172 50.000 0.00 0.00 0.00 2.92
129 130 2.636403 TCCATCGGCATCATCATCTTCT 59.364 45.455 0.00 0.00 0.00 2.85
144 145 4.038522 TCATCTTCTCCATCGTCCATCTTC 59.961 45.833 0.00 0.00 0.00 2.87
175 176 0.315251 GTTGCACTTCCCAGCTTTCC 59.685 55.000 0.00 0.00 0.00 3.13
218 219 1.801178 CTTTCACTTCTCGTGGCCTTC 59.199 52.381 3.32 0.00 43.94 3.46
270 271 0.471022 ATTTGCCCTTCGGTTTGGGT 60.471 50.000 0.00 0.00 45.06 4.51
291 292 4.159135 GGTATTTGTCGGTACCTCTCTTGA 59.841 45.833 10.90 0.00 37.85 3.02
295 296 1.819903 GTCGGTACCTCTCTTGAGCTT 59.180 52.381 10.90 0.00 38.93 3.74
346 347 9.249457 TCAAATTGACGAGAATGCTTATAGTAG 57.751 33.333 0.00 0.00 0.00 2.57
427 428 4.274602 CTCTATGAGGAGCATGCTTCAT 57.725 45.455 28.80 28.80 36.27 2.57
441 442 9.525409 GAGCATGCTTCATTTAATCTAAACAAT 57.475 29.630 23.61 0.00 0.00 2.71
451 452 7.747155 TTTAATCTAAACAATCCGTCCAACA 57.253 32.000 0.00 0.00 0.00 3.33
452 453 7.931578 TTAATCTAAACAATCCGTCCAACAT 57.068 32.000 0.00 0.00 0.00 2.71
462 463 1.131126 CCGTCCAACATCTGCACATTC 59.869 52.381 0.00 0.00 0.00 2.67
472 473 2.190538 TCTGCACATTCCCTGATCTCA 58.809 47.619 0.00 0.00 0.00 3.27
538 539 6.869206 ACTTAGCAATAAGTAGTTCCCTCA 57.131 37.500 0.00 0.00 38.41 3.86
556 557 5.076873 CCCTCAATTGAGAACCAAGGTTTA 58.923 41.667 32.49 0.00 44.74 2.01
558 559 6.127619 CCCTCAATTGAGAACCAAGGTTTATC 60.128 42.308 32.49 8.28 44.74 1.75
589 590 9.199982 CAATATGAGTTCTTTCAGCAAACAAAT 57.800 29.630 0.00 0.00 0.00 2.32
657 658 1.653151 GGAGCTACAAAGTTAGGCCG 58.347 55.000 0.00 0.00 0.00 6.13
698 699 6.350629 TGACCTTAGACTAAACCCTGTTAC 57.649 41.667 0.00 0.00 0.00 2.50
718 719 8.046294 TGTTACATACATACAACCCATGAAAC 57.954 34.615 0.00 0.00 0.00 2.78
730 731 2.613691 CCATGAAACAAAGGATGCAGC 58.386 47.619 0.00 0.00 0.00 5.25
746 748 2.119457 GCAGCGAAACAAAAAGACTGG 58.881 47.619 0.00 0.00 0.00 4.00
758 761 1.407656 AAGACTGGCCCAGTTCGACA 61.408 55.000 19.36 0.00 45.44 4.35
784 787 1.343681 ACCTCCCGTAGCCCAAATAGA 60.344 52.381 0.00 0.00 0.00 1.98
799 802 1.680522 ATAGAGCACAGGCCCAGTCG 61.681 60.000 0.00 0.00 42.56 4.18
802 805 4.101448 GCACAGGCCCAGTCGGAT 62.101 66.667 0.00 0.00 0.00 4.18
823 826 0.806102 CAACATCCTCACGTAGGCCG 60.806 60.000 0.00 0.00 46.10 6.13
892 895 1.958205 GGAGATCGAGCATTGGCCG 60.958 63.158 2.38 0.00 42.56 6.13
995 998 5.643379 AAAATTGACTAATGTGCGGATGT 57.357 34.783 0.00 0.00 0.00 3.06
996 999 5.643379 AAATTGACTAATGTGCGGATGTT 57.357 34.783 0.00 0.00 0.00 2.71
997 1000 4.882671 ATTGACTAATGTGCGGATGTTC 57.117 40.909 0.00 0.00 0.00 3.18
998 1001 3.610040 TGACTAATGTGCGGATGTTCT 57.390 42.857 0.00 0.00 0.00 3.01
999 1002 3.261580 TGACTAATGTGCGGATGTTCTG 58.738 45.455 0.00 0.00 0.00 3.02
1000 1003 3.056179 TGACTAATGTGCGGATGTTCTGA 60.056 43.478 0.00 0.00 0.00 3.27
1001 1004 4.122776 GACTAATGTGCGGATGTTCTGAT 58.877 43.478 0.00 0.00 0.00 2.90
1002 1005 3.873361 ACTAATGTGCGGATGTTCTGATG 59.127 43.478 0.00 0.00 0.00 3.07
1003 1006 1.671979 ATGTGCGGATGTTCTGATGG 58.328 50.000 0.00 0.00 0.00 3.51
1004 1007 1.026182 TGTGCGGATGTTCTGATGGC 61.026 55.000 0.00 0.00 0.00 4.40
1005 1008 0.745845 GTGCGGATGTTCTGATGGCT 60.746 55.000 0.00 0.00 0.00 4.75
1006 1009 0.745486 TGCGGATGTTCTGATGGCTG 60.745 55.000 0.00 0.00 0.00 4.85
1007 1010 0.462581 GCGGATGTTCTGATGGCTGA 60.463 55.000 0.00 0.00 0.00 4.26
1008 1011 2.013563 GCGGATGTTCTGATGGCTGAA 61.014 52.381 0.00 0.00 0.00 3.02
1009 1012 1.938577 CGGATGTTCTGATGGCTGAAG 59.061 52.381 0.00 0.00 33.41 3.02
1010 1013 1.674962 GGATGTTCTGATGGCTGAAGC 59.325 52.381 0.00 0.00 41.14 3.86
1011 1014 2.641305 GATGTTCTGATGGCTGAAGCT 58.359 47.619 1.74 0.00 41.70 3.74
1012 1015 2.574006 TGTTCTGATGGCTGAAGCTT 57.426 45.000 0.00 0.00 41.70 3.74
1013 1016 2.867624 TGTTCTGATGGCTGAAGCTTT 58.132 42.857 0.00 0.00 41.70 3.51
1014 1017 4.019792 TGTTCTGATGGCTGAAGCTTTA 57.980 40.909 0.00 0.00 41.70 1.85
1015 1018 4.005650 TGTTCTGATGGCTGAAGCTTTAG 58.994 43.478 13.68 13.68 41.70 1.85
1016 1019 2.636830 TCTGATGGCTGAAGCTTTAGC 58.363 47.619 29.73 29.73 41.70 3.09
1017 1020 2.026915 TCTGATGGCTGAAGCTTTAGCA 60.027 45.455 35.38 24.60 45.16 3.49
1018 1021 2.086869 TGATGGCTGAAGCTTTAGCAC 58.913 47.619 35.38 26.46 45.16 4.40
1019 1022 2.290514 TGATGGCTGAAGCTTTAGCACT 60.291 45.455 35.38 24.90 45.16 4.40
1020 1023 1.813513 TGGCTGAAGCTTTAGCACTC 58.186 50.000 35.38 22.77 45.16 3.51
1021 1024 1.072173 TGGCTGAAGCTTTAGCACTCA 59.928 47.619 35.38 24.68 45.16 3.41
1022 1025 2.154462 GGCTGAAGCTTTAGCACTCAA 58.846 47.619 35.38 0.00 45.16 3.02
1023 1026 2.554032 GGCTGAAGCTTTAGCACTCAAA 59.446 45.455 35.38 0.00 45.16 2.69
1024 1027 3.192212 GGCTGAAGCTTTAGCACTCAAAT 59.808 43.478 35.38 0.00 45.16 2.32
1025 1028 4.321527 GGCTGAAGCTTTAGCACTCAAATT 60.322 41.667 35.38 0.00 45.16 1.82
1026 1029 4.620184 GCTGAAGCTTTAGCACTCAAATTG 59.380 41.667 31.77 0.39 45.16 2.32
1027 1030 5.125100 TGAAGCTTTAGCACTCAAATTGG 57.875 39.130 0.00 0.00 45.16 3.16
1028 1031 4.022068 TGAAGCTTTAGCACTCAAATTGGG 60.022 41.667 0.00 0.00 45.16 4.12
1029 1032 2.232208 AGCTTTAGCACTCAAATTGGGC 59.768 45.455 4.33 0.00 45.16 5.36
1030 1033 2.675032 GCTTTAGCACTCAAATTGGGCC 60.675 50.000 0.00 0.00 41.59 5.80
1031 1034 2.603075 TTAGCACTCAAATTGGGCCT 57.397 45.000 4.53 0.00 0.00 5.19
1032 1035 3.730215 TTAGCACTCAAATTGGGCCTA 57.270 42.857 4.53 0.00 0.00 3.93
1033 1036 2.603075 AGCACTCAAATTGGGCCTAA 57.397 45.000 3.11 3.11 0.00 2.69
1034 1037 2.171003 AGCACTCAAATTGGGCCTAAC 58.829 47.619 2.51 0.00 0.00 2.34
1035 1038 1.892474 GCACTCAAATTGGGCCTAACA 59.108 47.619 2.51 0.00 0.00 2.41
1036 1039 2.352715 GCACTCAAATTGGGCCTAACAC 60.353 50.000 2.51 0.00 0.00 3.32
1037 1040 3.157087 CACTCAAATTGGGCCTAACACT 58.843 45.455 2.51 0.00 0.00 3.55
1038 1041 3.057315 CACTCAAATTGGGCCTAACACTG 60.057 47.826 2.51 1.84 0.00 3.66
1039 1042 2.493278 CTCAAATTGGGCCTAACACTGG 59.507 50.000 2.51 0.00 0.00 4.00
1045 1048 3.350377 GCCTAACACTGGCGCAAA 58.650 55.556 10.83 0.00 41.03 3.68
1046 1049 1.210155 GCCTAACACTGGCGCAAAG 59.790 57.895 10.83 8.99 41.03 2.77
1047 1050 1.875963 CCTAACACTGGCGCAAAGG 59.124 57.895 10.83 0.00 0.00 3.11
1048 1051 1.586154 CCTAACACTGGCGCAAAGGG 61.586 60.000 10.83 10.24 0.00 3.95
1049 1052 2.200170 CTAACACTGGCGCAAAGGGC 62.200 60.000 10.83 0.00 40.84 5.19
1058 1061 4.390048 GCAAAGGGCGGAGTGTAA 57.610 55.556 0.00 0.00 0.00 2.41
1059 1062 2.868253 GCAAAGGGCGGAGTGTAAT 58.132 52.632 0.00 0.00 0.00 1.89
1060 1063 0.733150 GCAAAGGGCGGAGTGTAATC 59.267 55.000 0.00 0.00 0.00 1.75
1061 1064 1.006832 CAAAGGGCGGAGTGTAATCG 58.993 55.000 0.00 0.00 0.00 3.34
1071 1074 5.441700 CGGAGTGTAATCGCATAATCATC 57.558 43.478 0.00 0.00 0.00 2.92
1072 1075 4.923281 CGGAGTGTAATCGCATAATCATCA 59.077 41.667 0.00 0.00 0.00 3.07
1073 1076 5.405269 CGGAGTGTAATCGCATAATCATCAA 59.595 40.000 0.00 0.00 0.00 2.57
1074 1077 6.091305 CGGAGTGTAATCGCATAATCATCAAT 59.909 38.462 0.00 0.00 0.00 2.57
1075 1078 7.459486 GGAGTGTAATCGCATAATCATCAATC 58.541 38.462 0.00 0.00 0.00 2.67
1076 1079 7.369803 AGTGTAATCGCATAATCATCAATCC 57.630 36.000 0.00 0.00 0.00 3.01
1077 1080 6.936335 AGTGTAATCGCATAATCATCAATCCA 59.064 34.615 0.00 0.00 0.00 3.41
1078 1081 7.118825 AGTGTAATCGCATAATCATCAATCCAG 59.881 37.037 0.00 0.00 0.00 3.86
1079 1082 7.118245 GTGTAATCGCATAATCATCAATCCAGA 59.882 37.037 0.00 0.00 0.00 3.86
1080 1083 6.492007 AATCGCATAATCATCAATCCAGAC 57.508 37.500 0.00 0.00 0.00 3.51
1081 1084 4.959723 TCGCATAATCATCAATCCAGACA 58.040 39.130 0.00 0.00 0.00 3.41
1082 1085 5.367302 TCGCATAATCATCAATCCAGACAA 58.633 37.500 0.00 0.00 0.00 3.18
1083 1086 5.237127 TCGCATAATCATCAATCCAGACAAC 59.763 40.000 0.00 0.00 0.00 3.32
1084 1087 5.561532 CGCATAATCATCAATCCAGACAACC 60.562 44.000 0.00 0.00 0.00 3.77
1085 1088 5.533903 GCATAATCATCAATCCAGACAACCT 59.466 40.000 0.00 0.00 0.00 3.50
1086 1089 6.514541 GCATAATCATCAATCCAGACAACCTG 60.515 42.308 0.00 0.00 42.55 4.00
1087 1090 4.849813 ATCATCAATCCAGACAACCTGA 57.150 40.909 0.00 0.00 45.78 3.86
1088 1091 4.639078 TCATCAATCCAGACAACCTGAA 57.361 40.909 0.00 0.00 45.78 3.02
1089 1092 4.582869 TCATCAATCCAGACAACCTGAAG 58.417 43.478 0.00 0.00 45.78 3.02
1090 1093 3.423539 TCAATCCAGACAACCTGAAGG 57.576 47.619 0.00 0.00 45.78 3.46
1105 1108 5.132897 CCTGAAGGTGATAGAGACTATGC 57.867 47.826 0.00 0.00 0.00 3.14
1106 1109 4.586421 CCTGAAGGTGATAGAGACTATGCA 59.414 45.833 0.00 0.00 0.00 3.96
1107 1110 5.278907 CCTGAAGGTGATAGAGACTATGCAG 60.279 48.000 0.00 0.00 0.00 4.41
1108 1111 4.586421 TGAAGGTGATAGAGACTATGCAGG 59.414 45.833 0.00 0.00 0.00 4.85
1109 1112 4.461450 AGGTGATAGAGACTATGCAGGA 57.539 45.455 0.00 0.00 0.00 3.86
1110 1113 4.148838 AGGTGATAGAGACTATGCAGGAC 58.851 47.826 0.00 0.00 0.00 3.85
1111 1114 3.057876 GGTGATAGAGACTATGCAGGACG 60.058 52.174 0.00 0.00 0.00 4.79
1112 1115 3.057876 GTGATAGAGACTATGCAGGACGG 60.058 52.174 0.00 0.00 0.00 4.79
1113 1116 3.181443 TGATAGAGACTATGCAGGACGGA 60.181 47.826 0.00 0.00 0.00 4.69
1114 1117 1.686355 AGAGACTATGCAGGACGGAG 58.314 55.000 0.00 0.00 0.00 4.63
1115 1118 0.671251 GAGACTATGCAGGACGGAGG 59.329 60.000 0.00 0.00 0.00 4.30
1116 1119 0.259065 AGACTATGCAGGACGGAGGA 59.741 55.000 0.00 0.00 0.00 3.71
1117 1120 0.386113 GACTATGCAGGACGGAGGAC 59.614 60.000 0.00 0.00 0.00 3.85
1118 1121 0.324368 ACTATGCAGGACGGAGGACA 60.324 55.000 0.00 0.00 0.00 4.02
1119 1122 0.824109 CTATGCAGGACGGAGGACAA 59.176 55.000 0.00 0.00 0.00 3.18
1120 1123 1.414181 CTATGCAGGACGGAGGACAAT 59.586 52.381 0.00 0.00 0.00 2.71
1121 1124 0.179000 ATGCAGGACGGAGGACAATC 59.821 55.000 0.00 0.00 0.00 2.67
1122 1125 1.191489 TGCAGGACGGAGGACAATCA 61.191 55.000 0.00 0.00 0.00 2.57
1123 1126 0.460987 GCAGGACGGAGGACAATCAG 60.461 60.000 0.00 0.00 0.00 2.90
1124 1127 0.460987 CAGGACGGAGGACAATCAGC 60.461 60.000 0.00 0.00 0.00 4.26
1125 1128 1.519455 GGACGGAGGACAATCAGCG 60.519 63.158 0.00 0.00 0.00 5.18
1126 1129 1.519455 GACGGAGGACAATCAGCGG 60.519 63.158 0.00 0.00 0.00 5.52
1127 1130 2.202932 CGGAGGACAATCAGCGGG 60.203 66.667 0.00 0.00 0.00 6.13
1128 1131 2.990479 GGAGGACAATCAGCGGGT 59.010 61.111 0.00 0.00 0.00 5.28
1129 1132 1.450312 GGAGGACAATCAGCGGGTG 60.450 63.158 0.00 0.00 0.00 4.61
1130 1133 2.045926 AGGACAATCAGCGGGTGC 60.046 61.111 1.51 0.00 43.24 5.01
1147 1150 4.834892 CGGCGGCGGCAATTCTTG 62.835 66.667 32.59 11.08 42.47 3.02
1148 1151 3.439540 GGCGGCGGCAATTCTTGA 61.440 61.111 29.41 0.00 42.47 3.02
1149 1152 2.100991 GCGGCGGCAATTCTTGAG 59.899 61.111 9.78 0.00 39.62 3.02
1150 1153 2.793946 CGGCGGCAATTCTTGAGG 59.206 61.111 10.53 0.00 0.00 3.86
1151 1154 1.745115 CGGCGGCAATTCTTGAGGA 60.745 57.895 10.53 0.00 0.00 3.71
1152 1155 1.803289 GGCGGCAATTCTTGAGGAC 59.197 57.895 3.07 0.00 0.00 3.85
1153 1156 0.678048 GGCGGCAATTCTTGAGGACT 60.678 55.000 3.07 0.00 0.00 3.85
1154 1157 0.449388 GCGGCAATTCTTGAGGACTG 59.551 55.000 0.00 0.00 0.00 3.51
1155 1158 0.449388 CGGCAATTCTTGAGGACTGC 59.551 55.000 0.00 0.00 34.21 4.40
1156 1159 1.831580 GGCAATTCTTGAGGACTGCT 58.168 50.000 0.00 0.00 34.92 4.24
1157 1160 2.165998 GGCAATTCTTGAGGACTGCTT 58.834 47.619 0.00 0.00 34.92 3.91
1158 1161 2.560105 GGCAATTCTTGAGGACTGCTTT 59.440 45.455 0.00 0.00 34.92 3.51
1159 1162 3.366781 GGCAATTCTTGAGGACTGCTTTC 60.367 47.826 0.00 0.00 34.92 2.62
1160 1163 3.505293 GCAATTCTTGAGGACTGCTTTCT 59.495 43.478 0.00 0.00 32.97 2.52
1161 1164 4.379290 GCAATTCTTGAGGACTGCTTTCTC 60.379 45.833 0.00 0.00 32.97 2.87
1162 1165 4.906747 ATTCTTGAGGACTGCTTTCTCT 57.093 40.909 0.00 0.00 0.00 3.10
1163 1166 6.169094 CAATTCTTGAGGACTGCTTTCTCTA 58.831 40.000 0.00 0.00 0.00 2.43
1164 1167 6.558488 ATTCTTGAGGACTGCTTTCTCTAT 57.442 37.500 0.00 0.00 0.00 1.98
1165 1168 5.336150 TCTTGAGGACTGCTTTCTCTATG 57.664 43.478 0.00 0.00 0.00 2.23
1166 1169 3.533606 TGAGGACTGCTTTCTCTATGC 57.466 47.619 0.00 0.00 0.00 3.14
1167 1170 2.833943 TGAGGACTGCTTTCTCTATGCA 59.166 45.455 0.00 0.00 35.78 3.96
1168 1171 3.453717 TGAGGACTGCTTTCTCTATGCAT 59.546 43.478 3.79 3.79 36.45 3.96
1169 1172 3.806380 AGGACTGCTTTCTCTATGCATG 58.194 45.455 10.16 0.00 36.45 4.06
1170 1173 3.199508 AGGACTGCTTTCTCTATGCATGT 59.800 43.478 10.16 0.00 36.45 3.21
1171 1174 3.311871 GGACTGCTTTCTCTATGCATGTG 59.688 47.826 10.16 2.07 36.45 3.21
1172 1175 4.186926 GACTGCTTTCTCTATGCATGTGA 58.813 43.478 10.16 6.75 36.45 3.58
1173 1176 4.778579 ACTGCTTTCTCTATGCATGTGAT 58.221 39.130 10.16 0.00 36.45 3.06
1174 1177 5.191426 ACTGCTTTCTCTATGCATGTGATT 58.809 37.500 10.16 0.00 36.45 2.57
1175 1178 5.651139 ACTGCTTTCTCTATGCATGTGATTT 59.349 36.000 10.16 0.00 36.45 2.17
1176 1179 6.152323 ACTGCTTTCTCTATGCATGTGATTTT 59.848 34.615 10.16 0.00 36.45 1.82
1177 1180 6.327154 TGCTTTCTCTATGCATGTGATTTTG 58.673 36.000 10.16 0.00 32.50 2.44
1178 1181 6.071784 TGCTTTCTCTATGCATGTGATTTTGT 60.072 34.615 10.16 0.00 32.50 2.83
1179 1182 6.471519 GCTTTCTCTATGCATGTGATTTTGTC 59.528 38.462 10.16 0.00 0.00 3.18
1180 1183 7.451501 TTTCTCTATGCATGTGATTTTGTCA 57.548 32.000 10.16 0.00 0.00 3.58
1181 1184 7.634671 TTCTCTATGCATGTGATTTTGTCAT 57.365 32.000 10.16 0.00 39.48 3.06
1182 1185 7.023197 TCTCTATGCATGTGATTTTGTCATG 57.977 36.000 10.16 0.00 39.48 3.07
1183 1186 6.824704 TCTCTATGCATGTGATTTTGTCATGA 59.175 34.615 10.16 0.00 40.64 3.07
1184 1187 6.788243 TCTATGCATGTGATTTTGTCATGAC 58.212 36.000 19.27 19.27 40.64 3.06
1185 1188 5.654603 ATGCATGTGATTTTGTCATGACT 57.345 34.783 25.55 6.21 40.64 3.41
1186 1189 6.762702 ATGCATGTGATTTTGTCATGACTA 57.237 33.333 25.55 16.43 40.64 2.59
1187 1190 6.185852 TGCATGTGATTTTGTCATGACTAG 57.814 37.500 25.55 6.05 40.64 2.57
1188 1191 5.939296 TGCATGTGATTTTGTCATGACTAGA 59.061 36.000 25.55 14.59 40.64 2.43
1189 1192 6.600427 TGCATGTGATTTTGTCATGACTAGAT 59.400 34.615 25.55 18.54 40.64 1.98
1190 1193 7.130917 GCATGTGATTTTGTCATGACTAGATC 58.869 38.462 24.33 24.33 40.64 2.75
1191 1194 7.637229 CATGTGATTTTGTCATGACTAGATCC 58.363 38.462 26.44 20.49 40.64 3.36
1192 1195 5.812127 TGTGATTTTGTCATGACTAGATCCG 59.188 40.000 26.44 0.00 39.48 4.18
1193 1196 6.042777 GTGATTTTGTCATGACTAGATCCGA 58.957 40.000 26.44 13.93 39.48 4.55
1194 1197 6.535150 GTGATTTTGTCATGACTAGATCCGAA 59.465 38.462 26.44 13.41 39.48 4.30
1195 1198 6.535150 TGATTTTGTCATGACTAGATCCGAAC 59.465 38.462 26.44 11.52 30.66 3.95
1196 1199 5.400066 TTTGTCATGACTAGATCCGAACA 57.600 39.130 25.55 0.00 0.00 3.18
1197 1200 5.598416 TTGTCATGACTAGATCCGAACAT 57.402 39.130 25.55 0.00 0.00 2.71
1198 1201 5.598416 TGTCATGACTAGATCCGAACATT 57.402 39.130 25.55 0.00 0.00 2.71
1199 1202 5.351458 TGTCATGACTAGATCCGAACATTG 58.649 41.667 25.55 0.00 0.00 2.82
1200 1203 5.105351 TGTCATGACTAGATCCGAACATTGT 60.105 40.000 25.55 0.00 0.00 2.71
1201 1204 6.096282 TGTCATGACTAGATCCGAACATTGTA 59.904 38.462 25.55 0.00 0.00 2.41
1202 1205 6.978659 GTCATGACTAGATCCGAACATTGTAA 59.021 38.462 18.83 0.00 0.00 2.41
1203 1206 7.653713 GTCATGACTAGATCCGAACATTGTAAT 59.346 37.037 18.83 0.00 0.00 1.89
1204 1207 8.856103 TCATGACTAGATCCGAACATTGTAATA 58.144 33.333 0.00 0.00 0.00 0.98
1205 1208 9.133627 CATGACTAGATCCGAACATTGTAATAG 57.866 37.037 0.00 0.00 0.00 1.73
1206 1209 8.459911 TGACTAGATCCGAACATTGTAATAGA 57.540 34.615 0.00 0.00 0.00 1.98
1207 1210 8.568794 TGACTAGATCCGAACATTGTAATAGAG 58.431 37.037 0.00 0.00 0.00 2.43
1208 1211 8.693120 ACTAGATCCGAACATTGTAATAGAGA 57.307 34.615 0.00 0.00 0.00 3.10
1209 1212 8.788806 ACTAGATCCGAACATTGTAATAGAGAG 58.211 37.037 0.00 0.00 0.00 3.20
1210 1213 6.987386 AGATCCGAACATTGTAATAGAGAGG 58.013 40.000 0.00 0.00 0.00 3.69
1211 1214 4.945246 TCCGAACATTGTAATAGAGAGGC 58.055 43.478 0.00 0.00 0.00 4.70
1212 1215 4.404394 TCCGAACATTGTAATAGAGAGGCA 59.596 41.667 0.00 0.00 0.00 4.75
1213 1216 5.105106 TCCGAACATTGTAATAGAGAGGCAA 60.105 40.000 0.00 0.00 0.00 4.52
1214 1217 5.584649 CCGAACATTGTAATAGAGAGGCAAA 59.415 40.000 0.00 0.00 0.00 3.68
1215 1218 6.260936 CCGAACATTGTAATAGAGAGGCAAAT 59.739 38.462 0.00 0.00 0.00 2.32
1216 1219 7.441157 CCGAACATTGTAATAGAGAGGCAAATA 59.559 37.037 0.00 0.00 0.00 1.40
1217 1220 8.826710 CGAACATTGTAATAGAGAGGCAAATAA 58.173 33.333 0.00 0.00 0.00 1.40
1220 1223 9.686683 ACATTGTAATAGAGAGGCAAATAAAGT 57.313 29.630 0.00 0.00 0.00 2.66
1223 1226 8.888579 TGTAATAGAGAGGCAAATAAAGTAGC 57.111 34.615 0.00 0.00 0.00 3.58
1224 1227 8.705594 TGTAATAGAGAGGCAAATAAAGTAGCT 58.294 33.333 0.00 0.00 0.00 3.32
1225 1228 9.198837 GTAATAGAGAGGCAAATAAAGTAGCTC 57.801 37.037 0.00 0.00 0.00 4.09
1226 1229 5.683876 AGAGAGGCAAATAAAGTAGCTCA 57.316 39.130 0.00 0.00 0.00 4.26
1227 1230 6.245890 AGAGAGGCAAATAAAGTAGCTCAT 57.754 37.500 0.00 0.00 0.00 2.90
1228 1231 6.054295 AGAGAGGCAAATAAAGTAGCTCATG 58.946 40.000 0.00 0.00 0.00 3.07
1229 1232 5.994250 AGAGGCAAATAAAGTAGCTCATGA 58.006 37.500 0.00 0.00 0.00 3.07
1230 1233 6.418101 AGAGGCAAATAAAGTAGCTCATGAA 58.582 36.000 0.00 0.00 0.00 2.57
1231 1234 6.317391 AGAGGCAAATAAAGTAGCTCATGAAC 59.683 38.462 0.00 0.00 0.00 3.18
1232 1235 6.183347 AGGCAAATAAAGTAGCTCATGAACT 58.817 36.000 3.72 3.72 0.00 3.01
1233 1236 6.660949 AGGCAAATAAAGTAGCTCATGAACTT 59.339 34.615 3.52 4.70 35.01 2.66
1234 1237 6.749118 GGCAAATAAAGTAGCTCATGAACTTG 59.251 38.462 11.15 2.26 33.85 3.16
1235 1238 6.252228 GCAAATAAAGTAGCTCATGAACTTGC 59.748 38.462 11.15 7.65 33.85 4.01
1236 1239 7.533426 CAAATAAAGTAGCTCATGAACTTGCT 58.467 34.615 11.15 11.30 39.30 3.91
1237 1240 8.668353 CAAATAAAGTAGCTCATGAACTTGCTA 58.332 33.333 11.15 10.39 37.02 3.49
1238 1241 8.430801 AATAAAGTAGCTCATGAACTTGCTAG 57.569 34.615 13.12 0.00 38.48 3.42
1239 1242 5.667539 AAGTAGCTCATGAACTTGCTAGA 57.332 39.130 13.12 0.00 38.48 2.43
1240 1243 5.867903 AGTAGCTCATGAACTTGCTAGAT 57.132 39.130 13.12 4.68 38.48 1.98
1241 1244 6.232581 AGTAGCTCATGAACTTGCTAGATT 57.767 37.500 13.12 2.44 38.48 2.40
1242 1245 7.353414 AGTAGCTCATGAACTTGCTAGATTA 57.647 36.000 13.12 0.00 38.48 1.75
1243 1246 7.432869 AGTAGCTCATGAACTTGCTAGATTAG 58.567 38.462 13.12 0.00 38.48 1.73
1263 1266 9.950496 AGATTAGCTAGATTTTCTTTGACTTCA 57.050 29.630 0.00 0.00 0.00 3.02
1265 1268 9.950496 ATTAGCTAGATTTTCTTTGACTTCAGA 57.050 29.630 0.00 0.00 0.00 3.27
1266 1269 7.665561 AGCTAGATTTTCTTTGACTTCAGAC 57.334 36.000 0.00 0.00 0.00 3.51
1267 1270 7.449247 AGCTAGATTTTCTTTGACTTCAGACT 58.551 34.615 0.00 0.00 0.00 3.24
1268 1271 8.589338 AGCTAGATTTTCTTTGACTTCAGACTA 58.411 33.333 0.00 0.00 0.00 2.59
1269 1272 9.377312 GCTAGATTTTCTTTGACTTCAGACTAT 57.623 33.333 0.00 0.00 0.00 2.12
1276 1279 7.969536 TCTTTGACTTCAGACTATTTTGAGG 57.030 36.000 0.00 0.00 0.00 3.86
1277 1280 7.735917 TCTTTGACTTCAGACTATTTTGAGGA 58.264 34.615 0.00 0.00 0.00 3.71
1278 1281 7.875041 TCTTTGACTTCAGACTATTTTGAGGAG 59.125 37.037 0.00 0.00 0.00 3.69
1279 1282 5.482908 TGACTTCAGACTATTTTGAGGAGC 58.517 41.667 0.00 0.00 0.00 4.70
1280 1283 4.837972 ACTTCAGACTATTTTGAGGAGCC 58.162 43.478 0.00 0.00 0.00 4.70
1281 1284 4.534103 ACTTCAGACTATTTTGAGGAGCCT 59.466 41.667 0.00 0.00 0.00 4.58
1282 1285 4.744795 TCAGACTATTTTGAGGAGCCTC 57.255 45.455 9.61 9.61 43.01 4.70
1283 1286 4.357325 TCAGACTATTTTGAGGAGCCTCT 58.643 43.478 16.87 0.12 43.12 3.69
1284 1287 5.519808 TCAGACTATTTTGAGGAGCCTCTA 58.480 41.667 16.87 7.30 43.12 2.43
1285 1288 5.958380 TCAGACTATTTTGAGGAGCCTCTAA 59.042 40.000 16.87 12.83 43.12 2.10
1286 1289 6.440647 TCAGACTATTTTGAGGAGCCTCTAAA 59.559 38.462 22.09 22.09 45.92 1.85
1295 1298 8.650143 TTTGAGGAGCCTCTAAATAAAATTGT 57.350 30.769 16.87 0.00 43.12 2.71
1296 1299 9.747898 TTTGAGGAGCCTCTAAATAAAATTGTA 57.252 29.630 16.87 0.00 43.12 2.41
1297 1300 9.747898 TTGAGGAGCCTCTAAATAAAATTGTAA 57.252 29.630 16.87 0.00 43.12 2.41
1298 1301 9.920946 TGAGGAGCCTCTAAATAAAATTGTAAT 57.079 29.630 16.87 0.00 43.12 1.89
1300 1303 9.920946 AGGAGCCTCTAAATAAAATTGTAATGA 57.079 29.630 0.00 0.00 0.00 2.57
1313 1316 7.864108 AAATTGTAATGATCCTCACGAATGA 57.136 32.000 0.00 0.00 0.00 2.57
1314 1317 8.455903 AAATTGTAATGATCCTCACGAATGAT 57.544 30.769 0.00 0.00 33.22 2.45
1315 1318 6.849588 TTGTAATGATCCTCACGAATGATG 57.150 37.500 0.00 0.00 33.22 3.07
1316 1319 5.917462 TGTAATGATCCTCACGAATGATGT 58.083 37.500 0.00 0.00 33.22 3.06
1317 1320 7.049799 TGTAATGATCCTCACGAATGATGTA 57.950 36.000 0.00 0.00 33.22 2.29
1318 1321 7.496747 TGTAATGATCCTCACGAATGATGTAA 58.503 34.615 0.00 0.00 33.22 2.41
1319 1322 6.851222 AATGATCCTCACGAATGATGTAAC 57.149 37.500 0.00 0.00 33.22 2.50
1320 1323 4.359706 TGATCCTCACGAATGATGTAACG 58.640 43.478 0.00 0.00 33.22 3.18
1321 1324 3.159353 TCCTCACGAATGATGTAACGG 57.841 47.619 0.00 0.00 33.22 4.44
1322 1325 2.494471 TCCTCACGAATGATGTAACGGT 59.506 45.455 0.00 0.00 33.22 4.83
1323 1326 3.056393 TCCTCACGAATGATGTAACGGTT 60.056 43.478 0.00 0.00 33.22 4.44
1324 1327 4.158209 TCCTCACGAATGATGTAACGGTTA 59.842 41.667 0.00 0.00 33.22 2.85
1325 1328 5.047847 CCTCACGAATGATGTAACGGTTAT 58.952 41.667 3.59 0.00 33.22 1.89
1326 1329 6.039605 TCCTCACGAATGATGTAACGGTTATA 59.960 38.462 3.59 1.55 33.22 0.98
1327 1330 6.866770 CCTCACGAATGATGTAACGGTTATAT 59.133 38.462 9.53 9.53 33.22 0.86
1328 1331 7.061905 CCTCACGAATGATGTAACGGTTATATC 59.938 40.741 23.05 23.05 35.19 1.63
1329 1332 7.654568 TCACGAATGATGTAACGGTTATATCT 58.345 34.615 27.08 15.19 35.52 1.98
1330 1333 8.785946 TCACGAATGATGTAACGGTTATATCTA 58.214 33.333 27.08 18.35 35.52 1.98
1331 1334 9.401873 CACGAATGATGTAACGGTTATATCTAA 57.598 33.333 27.08 15.39 35.52 2.10
1381 1384 6.963049 AAAAGTAGCCTCACGTATTACTTG 57.037 37.500 0.00 0.00 35.42 3.16
1382 1385 5.656213 AAGTAGCCTCACGTATTACTTGT 57.344 39.130 0.00 0.00 34.33 3.16
1383 1386 6.764308 AAGTAGCCTCACGTATTACTTGTA 57.236 37.500 0.00 0.00 34.33 2.41
1384 1387 6.764308 AGTAGCCTCACGTATTACTTGTAA 57.236 37.500 0.00 0.00 0.00 2.41
1385 1388 6.558909 AGTAGCCTCACGTATTACTTGTAAC 58.441 40.000 0.00 0.00 0.00 2.50
1386 1389 4.418392 AGCCTCACGTATTACTTGTAACG 58.582 43.478 0.00 4.19 40.99 3.18
1387 1390 3.000376 GCCTCACGTATTACTTGTAACGC 60.000 47.826 0.00 0.00 38.87 4.84
1388 1391 3.239026 CCTCACGTATTACTTGTAACGCG 59.761 47.826 3.53 3.53 38.87 6.01
1389 1392 4.077063 TCACGTATTACTTGTAACGCGA 57.923 40.909 15.93 7.97 38.87 5.87
1390 1393 3.845775 TCACGTATTACTTGTAACGCGAC 59.154 43.478 15.93 0.75 38.87 5.19
1391 1394 3.848019 CACGTATTACTTGTAACGCGACT 59.152 43.478 15.93 0.92 38.87 4.18
1392 1395 4.028990 CACGTATTACTTGTAACGCGACTC 60.029 45.833 15.93 2.31 38.87 3.36
1393 1396 4.142816 ACGTATTACTTGTAACGCGACTCT 60.143 41.667 15.93 0.00 38.87 3.24
1394 1397 5.063438 ACGTATTACTTGTAACGCGACTCTA 59.937 40.000 15.93 0.00 38.87 2.43
1395 1398 5.614781 CGTATTACTTGTAACGCGACTCTAG 59.385 44.000 15.93 10.70 0.00 2.43
1396 1399 5.557891 ATTACTTGTAACGCGACTCTAGT 57.442 39.130 15.93 15.70 0.00 2.57
1397 1400 3.198863 ACTTGTAACGCGACTCTAGTG 57.801 47.619 15.93 0.00 0.00 2.74
1398 1401 1.912110 CTTGTAACGCGACTCTAGTGC 59.088 52.381 15.93 0.00 0.00 4.40
1399 1402 1.162698 TGTAACGCGACTCTAGTGCT 58.837 50.000 15.93 0.00 0.00 4.40
1400 1403 1.129998 TGTAACGCGACTCTAGTGCTC 59.870 52.381 15.93 0.00 0.00 4.26
1401 1404 0.731417 TAACGCGACTCTAGTGCTCC 59.269 55.000 15.93 0.00 0.00 4.70
1402 1405 1.241990 AACGCGACTCTAGTGCTCCA 61.242 55.000 15.93 0.00 0.00 3.86
1403 1406 1.241990 ACGCGACTCTAGTGCTCCAA 61.242 55.000 15.93 0.00 0.00 3.53
1404 1407 0.524392 CGCGACTCTAGTGCTCCAAG 60.524 60.000 0.00 0.00 0.00 3.61
1405 1408 0.528470 GCGACTCTAGTGCTCCAAGT 59.472 55.000 0.00 0.00 0.00 3.16
1406 1409 1.743958 GCGACTCTAGTGCTCCAAGTA 59.256 52.381 0.00 0.00 0.00 2.24
1407 1410 2.223386 GCGACTCTAGTGCTCCAAGTAG 60.223 54.545 0.00 0.00 0.00 2.57
1408 1411 2.223386 CGACTCTAGTGCTCCAAGTAGC 60.223 54.545 0.00 0.00 43.08 3.58
1409 1412 2.100087 GACTCTAGTGCTCCAAGTAGCC 59.900 54.545 0.00 0.00 42.05 3.93
1410 1413 1.410882 CTCTAGTGCTCCAAGTAGCCC 59.589 57.143 0.00 0.00 42.05 5.19
1411 1414 1.195115 CTAGTGCTCCAAGTAGCCCA 58.805 55.000 0.00 0.00 42.05 5.36
1412 1415 1.555075 CTAGTGCTCCAAGTAGCCCAA 59.445 52.381 0.00 0.00 42.05 4.12
1413 1416 0.771127 AGTGCTCCAAGTAGCCCAAA 59.229 50.000 0.00 0.00 42.05 3.28
1414 1417 1.355720 AGTGCTCCAAGTAGCCCAAAT 59.644 47.619 0.00 0.00 42.05 2.32
1415 1418 2.576191 AGTGCTCCAAGTAGCCCAAATA 59.424 45.455 0.00 0.00 42.05 1.40
1416 1419 2.945668 GTGCTCCAAGTAGCCCAAATAG 59.054 50.000 0.00 0.00 42.05 1.73
1417 1420 2.843730 TGCTCCAAGTAGCCCAAATAGA 59.156 45.455 0.00 0.00 42.05 1.98
1418 1421 3.459598 TGCTCCAAGTAGCCCAAATAGAT 59.540 43.478 0.00 0.00 42.05 1.98
1419 1422 4.068599 GCTCCAAGTAGCCCAAATAGATC 58.931 47.826 0.00 0.00 36.45 2.75
1420 1423 4.310769 CTCCAAGTAGCCCAAATAGATCG 58.689 47.826 0.00 0.00 0.00 3.69
1421 1424 3.964688 TCCAAGTAGCCCAAATAGATCGA 59.035 43.478 0.00 0.00 0.00 3.59
1422 1425 4.593206 TCCAAGTAGCCCAAATAGATCGAT 59.407 41.667 0.00 0.00 0.00 3.59
1423 1426 4.932200 CCAAGTAGCCCAAATAGATCGATC 59.068 45.833 17.91 17.91 0.00 3.69
1424 1427 5.279708 CCAAGTAGCCCAAATAGATCGATCT 60.280 44.000 29.58 29.58 40.86 2.75
1425 1428 6.226787 CAAGTAGCCCAAATAGATCGATCTT 58.773 40.000 31.55 16.92 38.32 2.40
1426 1429 6.031751 AGTAGCCCAAATAGATCGATCTTC 57.968 41.667 31.55 4.63 38.32 2.87
1427 1430 5.777732 AGTAGCCCAAATAGATCGATCTTCT 59.222 40.000 31.55 17.28 38.32 2.85
1428 1431 4.892433 AGCCCAAATAGATCGATCTTCTG 58.108 43.478 31.55 23.26 38.32 3.02
1429 1432 3.999663 GCCCAAATAGATCGATCTTCTGG 59.000 47.826 31.55 28.97 38.32 3.86
1430 1433 3.999663 CCCAAATAGATCGATCTTCTGGC 59.000 47.826 31.55 1.22 38.32 4.85
1431 1434 4.262808 CCCAAATAGATCGATCTTCTGGCT 60.263 45.833 31.55 9.64 38.32 4.75
1432 1435 4.928615 CCAAATAGATCGATCTTCTGGCTC 59.071 45.833 31.55 0.50 38.32 4.70
1433 1436 4.433186 AATAGATCGATCTTCTGGCTCG 57.567 45.455 31.55 0.00 38.32 5.03
1434 1437 0.313672 AGATCGATCTTCTGGCTCGC 59.686 55.000 22.32 0.00 31.97 5.03
1435 1438 0.665972 GATCGATCTTCTGGCTCGCC 60.666 60.000 18.29 0.00 32.62 5.54
1436 1439 1.112315 ATCGATCTTCTGGCTCGCCT 61.112 55.000 9.65 0.00 36.94 5.52
1437 1440 1.591059 CGATCTTCTGGCTCGCCTG 60.591 63.158 9.65 8.96 36.94 4.85
1438 1441 1.819229 GATCTTCTGGCTCGCCTGA 59.181 57.895 12.72 12.72 41.33 3.86
1439 1442 0.392336 GATCTTCTGGCTCGCCTGAT 59.608 55.000 16.65 10.85 42.31 2.90
1440 1443 0.392336 ATCTTCTGGCTCGCCTGATC 59.608 55.000 16.65 0.00 42.31 2.92
1441 1444 1.591059 CTTCTGGCTCGCCTGATCG 60.591 63.158 16.65 8.69 42.31 3.69
1442 1445 2.009424 CTTCTGGCTCGCCTGATCGA 62.009 60.000 16.65 3.51 42.31 3.59
1443 1446 1.395045 TTCTGGCTCGCCTGATCGAT 61.395 55.000 16.65 0.00 42.31 3.59
1444 1447 1.372748 CTGGCTCGCCTGATCGATC 60.373 63.158 18.72 18.72 37.87 3.69
1445 1448 2.080222 CTGGCTCGCCTGATCGATCA 62.080 60.000 25.80 25.80 37.87 2.92
1446 1449 1.663074 GGCTCGCCTGATCGATCAC 60.663 63.158 23.99 14.26 37.87 3.06
1447 1450 1.066422 GCTCGCCTGATCGATCACA 59.934 57.895 23.99 5.28 37.87 3.58
1448 1451 1.211818 GCTCGCCTGATCGATCACAC 61.212 60.000 23.99 16.75 37.87 3.82
1449 1452 0.596083 CTCGCCTGATCGATCACACC 60.596 60.000 23.99 13.30 37.87 4.16
1450 1453 1.037579 TCGCCTGATCGATCACACCT 61.038 55.000 23.99 0.00 33.02 4.00
1451 1454 0.596083 CGCCTGATCGATCACACCTC 60.596 60.000 23.99 10.03 32.50 3.85
1452 1455 0.249657 GCCTGATCGATCACACCTCC 60.250 60.000 23.99 5.42 32.50 4.30
1453 1456 1.407936 CCTGATCGATCACACCTCCT 58.592 55.000 23.99 0.00 32.50 3.69
1454 1457 1.068281 CCTGATCGATCACACCTCCTG 59.932 57.143 23.99 11.49 32.50 3.86
1455 1458 1.753649 CTGATCGATCACACCTCCTGT 59.246 52.381 23.99 0.00 32.50 4.00
1456 1459 2.952310 CTGATCGATCACACCTCCTGTA 59.048 50.000 23.99 0.00 32.50 2.74
1457 1460 2.952310 TGATCGATCACACCTCCTGTAG 59.048 50.000 23.99 0.00 0.00 2.74
1458 1461 1.103803 TCGATCACACCTCCTGTAGC 58.896 55.000 0.00 0.00 0.00 3.58
1459 1462 0.248661 CGATCACACCTCCTGTAGCG 60.249 60.000 0.00 0.00 0.00 4.26
1460 1463 1.103803 GATCACACCTCCTGTAGCGA 58.896 55.000 0.00 0.00 0.00 4.93
1461 1464 1.066303 GATCACACCTCCTGTAGCGAG 59.934 57.143 0.00 0.00 0.00 5.03
1462 1465 0.251209 TCACACCTCCTGTAGCGAGT 60.251 55.000 0.00 0.00 0.00 4.18
1463 1466 0.171455 CACACCTCCTGTAGCGAGTC 59.829 60.000 0.00 0.00 0.00 3.36
1464 1467 0.251209 ACACCTCCTGTAGCGAGTCA 60.251 55.000 0.00 0.00 0.00 3.41
1465 1468 0.171455 CACCTCCTGTAGCGAGTCAC 59.829 60.000 0.00 0.00 0.00 3.67
1466 1469 0.966370 ACCTCCTGTAGCGAGTCACC 60.966 60.000 0.00 0.00 0.00 4.02
1467 1470 1.668101 CCTCCTGTAGCGAGTCACCC 61.668 65.000 0.00 0.00 0.00 4.61
1468 1471 0.681564 CTCCTGTAGCGAGTCACCCT 60.682 60.000 0.00 0.00 0.00 4.34
1469 1472 0.251653 TCCTGTAGCGAGTCACCCTT 60.252 55.000 0.00 0.00 0.00 3.95
1470 1473 0.173708 CCTGTAGCGAGTCACCCTTC 59.826 60.000 0.00 0.00 0.00 3.46
1471 1474 0.179161 CTGTAGCGAGTCACCCTTCG 60.179 60.000 0.00 0.00 0.00 3.79
1472 1475 0.892358 TGTAGCGAGTCACCCTTCGT 60.892 55.000 0.00 0.00 0.00 3.85
1473 1476 0.243095 GTAGCGAGTCACCCTTCGTT 59.757 55.000 0.00 0.00 0.00 3.85
1474 1477 0.524862 TAGCGAGTCACCCTTCGTTC 59.475 55.000 0.00 0.00 0.00 3.95
1475 1478 1.179814 AGCGAGTCACCCTTCGTTCT 61.180 55.000 0.00 0.00 0.00 3.01
1476 1479 0.319641 GCGAGTCACCCTTCGTTCTT 60.320 55.000 0.00 0.00 0.00 2.52
1477 1480 1.872653 GCGAGTCACCCTTCGTTCTTT 60.873 52.381 0.00 0.00 0.00 2.52
1478 1481 2.059541 CGAGTCACCCTTCGTTCTTTC 58.940 52.381 0.00 0.00 0.00 2.62
1479 1482 2.288273 CGAGTCACCCTTCGTTCTTTCT 60.288 50.000 0.00 0.00 0.00 2.52
1480 1483 3.729966 GAGTCACCCTTCGTTCTTTCTT 58.270 45.455 0.00 0.00 0.00 2.52
1596 1599 1.135831 TGAATGTGCAAATACGGTGCG 60.136 47.619 0.00 0.00 45.27 5.34
1601 1604 0.730265 TGCAAATACGGTGCGAATCC 59.270 50.000 0.00 0.00 45.27 3.01
1641 1644 0.808453 GCTACCGTATTTCGCTGGCA 60.808 55.000 0.00 0.00 38.35 4.92
1662 1665 4.887071 GCATGACATAGGGTCCATTTGTAA 59.113 41.667 0.00 0.00 46.38 2.41
1735 1738 3.235195 CCGCTGTCAGTACGCTAATATC 58.765 50.000 0.93 0.00 0.00 1.63
2182 2186 5.249780 TGTGGTACATAATCAACAACCCT 57.750 39.130 0.00 0.00 44.52 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 4.286291 GGGGAAAGGAGAAACTCAAGAGTA 59.714 45.833 2.72 0.00 41.58 2.59
37 38 2.734079 GTCTGCTTGACGAAAGGAAGAG 59.266 50.000 0.00 0.00 35.57 2.85
48 49 0.737715 CTAGCACGGGTCTGCTTGAC 60.738 60.000 3.39 2.51 45.64 3.18
114 115 3.001414 CGATGGAGAAGATGATGATGCC 58.999 50.000 0.00 0.00 0.00 4.40
115 116 3.661944 ACGATGGAGAAGATGATGATGC 58.338 45.455 0.00 0.00 0.00 3.91
122 123 4.305769 GAAGATGGACGATGGAGAAGATG 58.694 47.826 0.00 0.00 0.00 2.90
129 130 1.032794 CTCCGAAGATGGACGATGGA 58.967 55.000 0.00 0.00 33.48 3.41
144 145 0.036010 AGTGCAACCATTCCTCTCCG 60.036 55.000 0.00 0.00 37.80 4.63
175 176 5.301045 AGTCATGGAATTATGATGGCAGTTG 59.699 40.000 0.00 0.00 39.13 3.16
218 219 1.691196 TCCTTGCTGGAACTTGTTGG 58.309 50.000 0.00 0.00 42.94 3.77
270 271 4.142227 GCTCAAGAGAGGTACCGACAAATA 60.142 45.833 6.18 0.00 42.33 1.40
407 408 4.701651 AATGAAGCATGCTCCTCATAGA 57.298 40.909 27.20 7.30 33.19 1.98
418 419 8.961092 CGGATTGTTTAGATTAAATGAAGCATG 58.039 33.333 0.00 0.00 0.00 4.06
419 420 8.686334 ACGGATTGTTTAGATTAAATGAAGCAT 58.314 29.630 0.00 0.00 0.00 3.79
427 428 7.747155 TGTTGGACGGATTGTTTAGATTAAA 57.253 32.000 0.00 0.00 0.00 1.52
441 442 4.693532 GTGCAGATGTTGGACGGA 57.306 55.556 0.00 0.00 38.41 4.69
451 452 2.775960 TGAGATCAGGGAATGTGCAGAT 59.224 45.455 0.00 0.00 0.00 2.90
452 453 2.093288 GTGAGATCAGGGAATGTGCAGA 60.093 50.000 0.00 0.00 0.00 4.26
462 463 3.262420 CCACTTTTACGTGAGATCAGGG 58.738 50.000 0.00 0.00 37.06 4.45
472 473 4.074259 GGATTACCCAACCACTTTTACGT 58.926 43.478 0.00 0.00 34.14 3.57
556 557 7.177216 TGCTGAAAGAACTCATATTGGTTTGAT 59.823 33.333 0.00 0.00 34.07 2.57
558 559 6.680810 TGCTGAAAGAACTCATATTGGTTTG 58.319 36.000 0.00 0.00 34.07 2.93
648 649 0.255033 GAATTGACCCCGGCCTAACT 59.745 55.000 0.00 0.00 0.00 2.24
657 658 1.165270 CAACGAGGTGAATTGACCCC 58.835 55.000 10.79 0.00 36.56 4.95
674 675 5.899631 AACAGGGTTTAGTCTAAGGTCAA 57.100 39.130 0.00 0.00 0.00 3.18
698 699 7.035004 CCTTTGTTTCATGGGTTGTATGTATG 58.965 38.462 0.00 0.00 0.00 2.39
718 719 2.420628 TTGTTTCGCTGCATCCTTTG 57.579 45.000 0.00 0.00 0.00 2.77
730 731 1.407258 TGGGCCAGTCTTTTTGTTTCG 59.593 47.619 0.00 0.00 0.00 3.46
746 748 0.028902 GTTGTTGTGTCGAACTGGGC 59.971 55.000 0.00 0.00 0.00 5.36
758 761 1.373812 GGCTACGGGAGGTTGTTGT 59.626 57.895 0.00 0.00 0.00 3.32
799 802 3.099267 CTACGTGAGGATGTTGGATCC 57.901 52.381 4.20 4.20 38.47 3.36
823 826 2.409948 AGTGGCCAGCAGAGTTATTC 57.590 50.000 5.11 0.00 0.00 1.75
892 895 1.201343 GATCTAAGCGGTGCGAGAAC 58.799 55.000 0.00 0.00 31.45 3.01
972 975 6.024552 ACATCCGCACATTAGTCAATTTTT 57.975 33.333 0.00 0.00 0.00 1.94
973 976 5.643379 ACATCCGCACATTAGTCAATTTT 57.357 34.783 0.00 0.00 0.00 1.82
974 977 5.415701 AGAACATCCGCACATTAGTCAATTT 59.584 36.000 0.00 0.00 0.00 1.82
975 978 4.943705 AGAACATCCGCACATTAGTCAATT 59.056 37.500 0.00 0.00 0.00 2.32
976 979 4.333649 CAGAACATCCGCACATTAGTCAAT 59.666 41.667 0.00 0.00 0.00 2.57
977 980 3.684305 CAGAACATCCGCACATTAGTCAA 59.316 43.478 0.00 0.00 0.00 3.18
978 981 3.056179 TCAGAACATCCGCACATTAGTCA 60.056 43.478 0.00 0.00 0.00 3.41
979 982 3.521560 TCAGAACATCCGCACATTAGTC 58.478 45.455 0.00 0.00 0.00 2.59
980 983 3.610040 TCAGAACATCCGCACATTAGT 57.390 42.857 0.00 0.00 0.00 2.24
981 984 3.249320 CCATCAGAACATCCGCACATTAG 59.751 47.826 0.00 0.00 0.00 1.73
982 985 3.205338 CCATCAGAACATCCGCACATTA 58.795 45.455 0.00 0.00 0.00 1.90
983 986 2.019249 CCATCAGAACATCCGCACATT 58.981 47.619 0.00 0.00 0.00 2.71
984 987 1.671979 CCATCAGAACATCCGCACAT 58.328 50.000 0.00 0.00 0.00 3.21
985 988 1.026182 GCCATCAGAACATCCGCACA 61.026 55.000 0.00 0.00 0.00 4.57
986 989 0.745845 AGCCATCAGAACATCCGCAC 60.746 55.000 0.00 0.00 0.00 5.34
987 990 0.745486 CAGCCATCAGAACATCCGCA 60.745 55.000 0.00 0.00 0.00 5.69
988 991 0.462581 TCAGCCATCAGAACATCCGC 60.463 55.000 0.00 0.00 0.00 5.54
989 992 1.938577 CTTCAGCCATCAGAACATCCG 59.061 52.381 0.00 0.00 0.00 4.18
990 993 1.674962 GCTTCAGCCATCAGAACATCC 59.325 52.381 0.00 0.00 34.31 3.51
991 994 2.641305 AGCTTCAGCCATCAGAACATC 58.359 47.619 0.00 0.00 43.38 3.06
992 995 2.803030 AGCTTCAGCCATCAGAACAT 57.197 45.000 0.00 0.00 43.38 2.71
993 996 2.574006 AAGCTTCAGCCATCAGAACA 57.426 45.000 0.00 0.00 43.38 3.18
994 997 3.181502 GCTAAAGCTTCAGCCATCAGAAC 60.182 47.826 10.81 0.00 43.38 3.01
995 998 3.012518 GCTAAAGCTTCAGCCATCAGAA 58.987 45.455 10.81 0.00 43.38 3.02
996 999 2.026915 TGCTAAAGCTTCAGCCATCAGA 60.027 45.455 19.10 0.00 43.38 3.27
997 1000 2.097142 GTGCTAAAGCTTCAGCCATCAG 59.903 50.000 19.10 0.00 43.38 2.90
998 1001 2.086869 GTGCTAAAGCTTCAGCCATCA 58.913 47.619 19.10 0.00 43.38 3.07
999 1002 2.354199 GAGTGCTAAAGCTTCAGCCATC 59.646 50.000 19.10 12.55 43.38 3.51
1000 1003 2.290514 TGAGTGCTAAAGCTTCAGCCAT 60.291 45.455 19.10 7.25 43.38 4.40
1001 1004 1.072173 TGAGTGCTAAAGCTTCAGCCA 59.928 47.619 19.10 7.02 43.38 4.75
1002 1005 1.813513 TGAGTGCTAAAGCTTCAGCC 58.186 50.000 19.10 10.20 43.38 4.85
1003 1006 3.904136 TTTGAGTGCTAAAGCTTCAGC 57.096 42.857 15.16 15.16 42.66 4.26
1004 1007 5.159209 CCAATTTGAGTGCTAAAGCTTCAG 58.841 41.667 0.00 0.00 42.66 3.02
1005 1008 4.022068 CCCAATTTGAGTGCTAAAGCTTCA 60.022 41.667 0.00 4.81 42.66 3.02
1006 1009 4.488879 CCCAATTTGAGTGCTAAAGCTTC 58.511 43.478 0.00 2.31 42.66 3.86
1007 1010 3.306294 GCCCAATTTGAGTGCTAAAGCTT 60.306 43.478 3.26 0.00 42.66 3.74
1008 1011 2.232208 GCCCAATTTGAGTGCTAAAGCT 59.768 45.455 3.26 0.00 42.66 3.74
1009 1012 2.610433 GCCCAATTTGAGTGCTAAAGC 58.390 47.619 0.00 0.00 42.50 3.51
1010 1013 2.827921 AGGCCCAATTTGAGTGCTAAAG 59.172 45.455 0.00 0.00 0.00 1.85
1011 1014 2.888212 AGGCCCAATTTGAGTGCTAAA 58.112 42.857 0.00 0.00 0.00 1.85
1012 1015 2.603075 AGGCCCAATTTGAGTGCTAA 57.397 45.000 0.00 0.00 0.00 3.09
1013 1016 3.245087 TGTTAGGCCCAATTTGAGTGCTA 60.245 43.478 0.00 0.00 0.00 3.49
1014 1017 2.171003 GTTAGGCCCAATTTGAGTGCT 58.829 47.619 0.00 0.00 0.00 4.40
1015 1018 1.892474 TGTTAGGCCCAATTTGAGTGC 59.108 47.619 0.00 0.00 0.00 4.40
1016 1019 3.057315 CAGTGTTAGGCCCAATTTGAGTG 60.057 47.826 0.00 0.00 0.00 3.51
1017 1020 3.157087 CAGTGTTAGGCCCAATTTGAGT 58.843 45.455 0.00 0.00 0.00 3.41
1018 1021 2.493278 CCAGTGTTAGGCCCAATTTGAG 59.507 50.000 0.00 0.00 0.00 3.02
1019 1022 2.524306 CCAGTGTTAGGCCCAATTTGA 58.476 47.619 0.00 0.00 0.00 2.69
1020 1023 1.066929 GCCAGTGTTAGGCCCAATTTG 60.067 52.381 0.00 0.00 46.50 2.32
1021 1024 1.266178 GCCAGTGTTAGGCCCAATTT 58.734 50.000 0.00 0.00 46.50 1.82
1022 1025 2.976099 GCCAGTGTTAGGCCCAATT 58.024 52.632 0.00 0.00 46.50 2.32
1023 1026 4.764143 GCCAGTGTTAGGCCCAAT 57.236 55.556 0.00 0.00 46.50 3.16
1029 1032 1.586154 CCCTTTGCGCCAGTGTTAGG 61.586 60.000 4.18 0.00 0.00 2.69
1030 1033 1.875963 CCCTTTGCGCCAGTGTTAG 59.124 57.895 4.18 0.00 0.00 2.34
1031 1034 2.265182 GCCCTTTGCGCCAGTGTTA 61.265 57.895 4.18 0.00 0.00 2.41
1032 1035 3.605664 GCCCTTTGCGCCAGTGTT 61.606 61.111 4.18 0.00 0.00 3.32
1041 1044 0.733150 GATTACACTCCGCCCTTTGC 59.267 55.000 0.00 0.00 0.00 3.68
1042 1045 1.006832 CGATTACACTCCGCCCTTTG 58.993 55.000 0.00 0.00 0.00 2.77
1043 1046 0.743345 GCGATTACACTCCGCCCTTT 60.743 55.000 0.00 0.00 42.77 3.11
1044 1047 1.153429 GCGATTACACTCCGCCCTT 60.153 57.895 0.00 0.00 42.77 3.95
1045 1048 2.499685 GCGATTACACTCCGCCCT 59.500 61.111 0.00 0.00 42.77 5.19
1049 1052 4.923281 TGATGATTATGCGATTACACTCCG 59.077 41.667 0.00 0.00 0.00 4.63
1050 1053 6.785488 TTGATGATTATGCGATTACACTCC 57.215 37.500 0.00 0.00 0.00 3.85
1051 1054 7.118245 TGGATTGATGATTATGCGATTACACTC 59.882 37.037 0.00 0.00 0.00 3.51
1052 1055 6.936335 TGGATTGATGATTATGCGATTACACT 59.064 34.615 0.00 0.00 0.00 3.55
1053 1056 7.118245 TCTGGATTGATGATTATGCGATTACAC 59.882 37.037 0.00 0.00 0.00 2.90
1054 1057 7.118245 GTCTGGATTGATGATTATGCGATTACA 59.882 37.037 0.00 0.00 0.00 2.41
1055 1058 7.118245 TGTCTGGATTGATGATTATGCGATTAC 59.882 37.037 0.00 0.00 0.00 1.89
1056 1059 7.160726 TGTCTGGATTGATGATTATGCGATTA 58.839 34.615 0.00 0.00 0.00 1.75
1057 1060 5.999600 TGTCTGGATTGATGATTATGCGATT 59.000 36.000 0.00 0.00 0.00 3.34
1058 1061 5.554070 TGTCTGGATTGATGATTATGCGAT 58.446 37.500 0.00 0.00 0.00 4.58
1059 1062 4.959723 TGTCTGGATTGATGATTATGCGA 58.040 39.130 0.00 0.00 0.00 5.10
1060 1063 5.446709 GTTGTCTGGATTGATGATTATGCG 58.553 41.667 0.00 0.00 0.00 4.73
1061 1064 5.533903 AGGTTGTCTGGATTGATGATTATGC 59.466 40.000 0.00 0.00 0.00 3.14
1062 1065 6.769341 TCAGGTTGTCTGGATTGATGATTATG 59.231 38.462 0.00 0.00 43.53 1.90
1063 1066 6.903516 TCAGGTTGTCTGGATTGATGATTAT 58.096 36.000 0.00 0.00 43.53 1.28
1064 1067 6.312141 TCAGGTTGTCTGGATTGATGATTA 57.688 37.500 0.00 0.00 43.53 1.75
1065 1068 5.183530 TCAGGTTGTCTGGATTGATGATT 57.816 39.130 0.00 0.00 43.53 2.57
1066 1069 4.849813 TCAGGTTGTCTGGATTGATGAT 57.150 40.909 0.00 0.00 43.53 2.45
1067 1070 4.566278 CCTTCAGGTTGTCTGGATTGATGA 60.566 45.833 0.00 0.00 43.53 2.92
1068 1071 3.693085 CCTTCAGGTTGTCTGGATTGATG 59.307 47.826 0.00 0.00 43.53 3.07
1069 1072 3.960571 CCTTCAGGTTGTCTGGATTGAT 58.039 45.455 0.00 0.00 43.53 2.57
1070 1073 3.423539 CCTTCAGGTTGTCTGGATTGA 57.576 47.619 0.00 0.00 43.53 2.57
1083 1086 4.586421 TGCATAGTCTCTATCACCTTCAGG 59.414 45.833 0.00 0.00 42.17 3.86
1084 1087 5.278907 CCTGCATAGTCTCTATCACCTTCAG 60.279 48.000 0.00 0.00 0.00 3.02
1085 1088 4.586421 CCTGCATAGTCTCTATCACCTTCA 59.414 45.833 0.00 0.00 0.00 3.02
1086 1089 4.830046 TCCTGCATAGTCTCTATCACCTTC 59.170 45.833 0.00 0.00 0.00 3.46
1087 1090 4.586841 GTCCTGCATAGTCTCTATCACCTT 59.413 45.833 0.00 0.00 0.00 3.50
1088 1091 4.148838 GTCCTGCATAGTCTCTATCACCT 58.851 47.826 0.00 0.00 0.00 4.00
1089 1092 3.057876 CGTCCTGCATAGTCTCTATCACC 60.058 52.174 0.00 0.00 0.00 4.02
1090 1093 3.057876 CCGTCCTGCATAGTCTCTATCAC 60.058 52.174 0.00 0.00 0.00 3.06
1091 1094 3.149981 CCGTCCTGCATAGTCTCTATCA 58.850 50.000 0.00 0.00 0.00 2.15
1092 1095 3.413327 TCCGTCCTGCATAGTCTCTATC 58.587 50.000 0.00 0.00 0.00 2.08
1093 1096 3.417101 CTCCGTCCTGCATAGTCTCTAT 58.583 50.000 0.00 0.00 0.00 1.98
1094 1097 2.487445 CCTCCGTCCTGCATAGTCTCTA 60.487 54.545 0.00 0.00 0.00 2.43
1095 1098 1.686355 CTCCGTCCTGCATAGTCTCT 58.314 55.000 0.00 0.00 0.00 3.10
1096 1099 0.671251 CCTCCGTCCTGCATAGTCTC 59.329 60.000 0.00 0.00 0.00 3.36
1097 1100 0.259065 TCCTCCGTCCTGCATAGTCT 59.741 55.000 0.00 0.00 0.00 3.24
1098 1101 0.386113 GTCCTCCGTCCTGCATAGTC 59.614 60.000 0.00 0.00 0.00 2.59
1099 1102 0.324368 TGTCCTCCGTCCTGCATAGT 60.324 55.000 0.00 0.00 0.00 2.12
1100 1103 0.824109 TTGTCCTCCGTCCTGCATAG 59.176 55.000 0.00 0.00 0.00 2.23
1101 1104 1.412710 GATTGTCCTCCGTCCTGCATA 59.587 52.381 0.00 0.00 0.00 3.14
1102 1105 0.179000 GATTGTCCTCCGTCCTGCAT 59.821 55.000 0.00 0.00 0.00 3.96
1103 1106 1.191489 TGATTGTCCTCCGTCCTGCA 61.191 55.000 0.00 0.00 0.00 4.41
1104 1107 0.460987 CTGATTGTCCTCCGTCCTGC 60.461 60.000 0.00 0.00 0.00 4.85
1105 1108 0.460987 GCTGATTGTCCTCCGTCCTG 60.461 60.000 0.00 0.00 0.00 3.86
1106 1109 1.901085 GCTGATTGTCCTCCGTCCT 59.099 57.895 0.00 0.00 0.00 3.85
1107 1110 1.519455 CGCTGATTGTCCTCCGTCC 60.519 63.158 0.00 0.00 0.00 4.79
1108 1111 1.519455 CCGCTGATTGTCCTCCGTC 60.519 63.158 0.00 0.00 0.00 4.79
1109 1112 2.579201 CCGCTGATTGTCCTCCGT 59.421 61.111 0.00 0.00 0.00 4.69
1110 1113 2.202932 CCCGCTGATTGTCCTCCG 60.203 66.667 0.00 0.00 0.00 4.63
1111 1114 1.450312 CACCCGCTGATTGTCCTCC 60.450 63.158 0.00 0.00 0.00 4.30
1112 1115 2.109126 GCACCCGCTGATTGTCCTC 61.109 63.158 0.00 0.00 34.30 3.71
1113 1116 2.045926 GCACCCGCTGATTGTCCT 60.046 61.111 0.00 0.00 34.30 3.85
1114 1117 3.499737 CGCACCCGCTGATTGTCC 61.500 66.667 0.00 0.00 35.30 4.02
1115 1118 3.499737 CCGCACCCGCTGATTGTC 61.500 66.667 0.00 0.00 35.30 3.18
1130 1133 4.834892 CAAGAATTGCCGCCGCCG 62.835 66.667 0.00 0.00 40.39 6.46
1140 1143 5.240013 AGAGAAAGCAGTCCTCAAGAATT 57.760 39.130 0.00 0.00 0.00 2.17
1141 1144 4.906747 AGAGAAAGCAGTCCTCAAGAAT 57.093 40.909 0.00 0.00 0.00 2.40
1142 1145 5.728471 CATAGAGAAAGCAGTCCTCAAGAA 58.272 41.667 0.00 0.00 0.00 2.52
1143 1146 4.382470 GCATAGAGAAAGCAGTCCTCAAGA 60.382 45.833 0.00 0.00 0.00 3.02
1144 1147 3.870419 GCATAGAGAAAGCAGTCCTCAAG 59.130 47.826 0.00 0.00 0.00 3.02
1145 1148 3.261643 TGCATAGAGAAAGCAGTCCTCAA 59.738 43.478 0.00 0.00 33.75 3.02
1146 1149 2.833943 TGCATAGAGAAAGCAGTCCTCA 59.166 45.455 0.00 0.00 33.75 3.86
1147 1150 3.533606 TGCATAGAGAAAGCAGTCCTC 57.466 47.619 0.00 0.00 33.75 3.71
1148 1151 3.199508 ACATGCATAGAGAAAGCAGTCCT 59.800 43.478 0.00 0.00 42.14 3.85
1149 1152 3.311871 CACATGCATAGAGAAAGCAGTCC 59.688 47.826 0.00 0.00 42.14 3.85
1150 1153 4.186926 TCACATGCATAGAGAAAGCAGTC 58.813 43.478 0.00 0.00 42.14 3.51
1151 1154 4.212143 TCACATGCATAGAGAAAGCAGT 57.788 40.909 0.00 0.00 42.14 4.40
1152 1155 5.752892 AATCACATGCATAGAGAAAGCAG 57.247 39.130 0.00 0.00 42.14 4.24
1153 1156 6.071784 ACAAAATCACATGCATAGAGAAAGCA 60.072 34.615 0.00 0.00 43.14 3.91
1154 1157 6.327934 ACAAAATCACATGCATAGAGAAAGC 58.672 36.000 0.00 0.00 0.00 3.51
1155 1158 7.532571 TGACAAAATCACATGCATAGAGAAAG 58.467 34.615 0.00 0.00 29.99 2.62
1156 1159 7.451501 TGACAAAATCACATGCATAGAGAAA 57.548 32.000 0.00 0.00 29.99 2.52
1157 1160 7.337436 TCATGACAAAATCACATGCATAGAGAA 59.663 33.333 0.00 0.00 41.24 2.87
1158 1161 6.824704 TCATGACAAAATCACATGCATAGAGA 59.175 34.615 0.00 0.00 41.24 3.10
1159 1162 6.910972 GTCATGACAAAATCACATGCATAGAG 59.089 38.462 21.07 0.00 41.24 2.43
1160 1163 6.600427 AGTCATGACAAAATCACATGCATAGA 59.400 34.615 27.02 0.41 41.24 1.98
1161 1164 6.792326 AGTCATGACAAAATCACATGCATAG 58.208 36.000 27.02 0.00 41.24 2.23
1162 1165 6.762702 AGTCATGACAAAATCACATGCATA 57.237 33.333 27.02 0.00 41.24 3.14
1163 1166 5.654603 AGTCATGACAAAATCACATGCAT 57.345 34.783 27.02 0.00 41.24 3.96
1164 1167 5.939296 TCTAGTCATGACAAAATCACATGCA 59.061 36.000 27.02 0.00 41.24 3.96
1165 1168 6.426980 TCTAGTCATGACAAAATCACATGC 57.573 37.500 27.02 0.00 41.24 4.06
1166 1169 7.517893 CGGATCTAGTCATGACAAAATCACATG 60.518 40.741 27.02 12.22 41.24 3.21
1167 1170 6.481313 CGGATCTAGTCATGACAAAATCACAT 59.519 38.462 27.02 6.18 41.24 3.21
1168 1171 5.812127 CGGATCTAGTCATGACAAAATCACA 59.188 40.000 27.02 3.06 41.24 3.58
1169 1172 6.042777 TCGGATCTAGTCATGACAAAATCAC 58.957 40.000 27.02 16.11 41.24 3.06
1170 1173 6.220726 TCGGATCTAGTCATGACAAAATCA 57.779 37.500 27.02 8.85 43.13 2.57
1171 1174 6.535150 TGTTCGGATCTAGTCATGACAAAATC 59.465 38.462 27.02 22.03 0.00 2.17
1172 1175 6.406370 TGTTCGGATCTAGTCATGACAAAAT 58.594 36.000 27.02 15.99 0.00 1.82
1173 1176 5.789521 TGTTCGGATCTAGTCATGACAAAA 58.210 37.500 27.02 12.00 0.00 2.44
1174 1177 5.400066 TGTTCGGATCTAGTCATGACAAA 57.600 39.130 27.02 13.85 0.00 2.83
1175 1178 5.598416 ATGTTCGGATCTAGTCATGACAA 57.402 39.130 27.02 12.70 0.00 3.18
1176 1179 5.105351 ACAATGTTCGGATCTAGTCATGACA 60.105 40.000 27.02 12.38 0.00 3.58
1177 1180 5.352284 ACAATGTTCGGATCTAGTCATGAC 58.648 41.667 18.47 18.47 0.00 3.06
1178 1181 5.598416 ACAATGTTCGGATCTAGTCATGA 57.402 39.130 0.00 0.00 0.00 3.07
1179 1182 7.953158 ATTACAATGTTCGGATCTAGTCATG 57.047 36.000 0.00 0.00 0.00 3.07
1180 1183 9.078990 TCTATTACAATGTTCGGATCTAGTCAT 57.921 33.333 0.00 0.00 0.00 3.06
1181 1184 8.459911 TCTATTACAATGTTCGGATCTAGTCA 57.540 34.615 0.00 0.00 0.00 3.41
1182 1185 8.784994 TCTCTATTACAATGTTCGGATCTAGTC 58.215 37.037 0.00 0.00 0.00 2.59
1183 1186 8.693120 TCTCTATTACAATGTTCGGATCTAGT 57.307 34.615 0.00 0.00 0.00 2.57
1184 1187 8.240682 CCTCTCTATTACAATGTTCGGATCTAG 58.759 40.741 0.00 0.00 0.00 2.43
1185 1188 7.309255 GCCTCTCTATTACAATGTTCGGATCTA 60.309 40.741 0.00 0.00 0.00 1.98
1186 1189 6.517529 GCCTCTCTATTACAATGTTCGGATCT 60.518 42.308 0.00 0.00 0.00 2.75
1187 1190 5.635700 GCCTCTCTATTACAATGTTCGGATC 59.364 44.000 0.00 0.00 0.00 3.36
1188 1191 5.070446 TGCCTCTCTATTACAATGTTCGGAT 59.930 40.000 0.00 0.00 0.00 4.18
1189 1192 4.404394 TGCCTCTCTATTACAATGTTCGGA 59.596 41.667 0.00 0.00 0.00 4.55
1190 1193 4.693283 TGCCTCTCTATTACAATGTTCGG 58.307 43.478 0.00 0.00 0.00 4.30
1191 1194 6.662414 TTTGCCTCTCTATTACAATGTTCG 57.338 37.500 0.00 0.00 0.00 3.95
1194 1197 9.686683 ACTTTATTTGCCTCTCTATTACAATGT 57.313 29.630 0.00 0.00 0.00 2.71
1197 1200 9.326413 GCTACTTTATTTGCCTCTCTATTACAA 57.674 33.333 0.00 0.00 0.00 2.41
1198 1201 8.705594 AGCTACTTTATTTGCCTCTCTATTACA 58.294 33.333 0.00 0.00 0.00 2.41
1199 1202 9.198837 GAGCTACTTTATTTGCCTCTCTATTAC 57.801 37.037 0.00 0.00 0.00 1.89
1200 1203 8.924303 TGAGCTACTTTATTTGCCTCTCTATTA 58.076 33.333 0.00 0.00 0.00 0.98
1201 1204 7.796054 TGAGCTACTTTATTTGCCTCTCTATT 58.204 34.615 0.00 0.00 0.00 1.73
1202 1205 7.366847 TGAGCTACTTTATTTGCCTCTCTAT 57.633 36.000 0.00 0.00 0.00 1.98
1203 1206 6.791867 TGAGCTACTTTATTTGCCTCTCTA 57.208 37.500 0.00 0.00 0.00 2.43
1204 1207 5.683876 TGAGCTACTTTATTTGCCTCTCT 57.316 39.130 0.00 0.00 0.00 3.10
1205 1208 6.051717 TCATGAGCTACTTTATTTGCCTCTC 58.948 40.000 0.00 0.00 0.00 3.20
1206 1209 5.994250 TCATGAGCTACTTTATTTGCCTCT 58.006 37.500 0.00 0.00 0.00 3.69
1207 1210 6.317391 AGTTCATGAGCTACTTTATTTGCCTC 59.683 38.462 10.73 0.00 0.00 4.70
1208 1211 6.183347 AGTTCATGAGCTACTTTATTTGCCT 58.817 36.000 10.73 0.00 0.00 4.75
1209 1212 6.442513 AGTTCATGAGCTACTTTATTTGCC 57.557 37.500 10.73 0.00 0.00 4.52
1210 1213 6.252228 GCAAGTTCATGAGCTACTTTATTTGC 59.748 38.462 12.88 11.91 30.08 3.68
1211 1214 7.533426 AGCAAGTTCATGAGCTACTTTATTTG 58.467 34.615 12.88 5.94 35.19 2.32
1212 1215 7.693969 AGCAAGTTCATGAGCTACTTTATTT 57.306 32.000 12.88 0.00 35.19 1.40
1213 1216 8.260818 TCTAGCAAGTTCATGAGCTACTTTATT 58.739 33.333 12.88 2.93 38.47 1.40
1214 1217 7.786030 TCTAGCAAGTTCATGAGCTACTTTAT 58.214 34.615 12.88 5.37 38.47 1.40
1215 1218 7.170393 TCTAGCAAGTTCATGAGCTACTTTA 57.830 36.000 12.88 2.05 38.47 1.85
1216 1219 6.042638 TCTAGCAAGTTCATGAGCTACTTT 57.957 37.500 12.88 0.97 38.47 2.66
1217 1220 5.667539 TCTAGCAAGTTCATGAGCTACTT 57.332 39.130 12.88 8.88 38.47 2.24
1218 1221 5.867903 ATCTAGCAAGTTCATGAGCTACT 57.132 39.130 12.88 14.78 38.47 2.57
1219 1222 7.636259 CTAATCTAGCAAGTTCATGAGCTAC 57.364 40.000 12.88 8.30 38.47 3.58
1237 1240 9.950496 TGAAGTCAAAGAAAATCTAGCTAATCT 57.050 29.630 0.00 0.00 0.00 2.40
1239 1242 9.950496 TCTGAAGTCAAAGAAAATCTAGCTAAT 57.050 29.630 0.00 0.00 0.00 1.73
1240 1243 9.209175 GTCTGAAGTCAAAGAAAATCTAGCTAA 57.791 33.333 0.00 0.00 0.00 3.09
1241 1244 8.589338 AGTCTGAAGTCAAAGAAAATCTAGCTA 58.411 33.333 0.00 0.00 0.00 3.32
1242 1245 7.449247 AGTCTGAAGTCAAAGAAAATCTAGCT 58.551 34.615 0.00 0.00 0.00 3.32
1243 1246 7.665561 AGTCTGAAGTCAAAGAAAATCTAGC 57.334 36.000 0.00 0.00 0.00 3.42
1250 1253 8.840321 CCTCAAAATAGTCTGAAGTCAAAGAAA 58.160 33.333 0.00 0.00 0.00 2.52
1251 1254 8.210946 TCCTCAAAATAGTCTGAAGTCAAAGAA 58.789 33.333 0.00 0.00 0.00 2.52
1252 1255 7.735917 TCCTCAAAATAGTCTGAAGTCAAAGA 58.264 34.615 0.00 0.00 0.00 2.52
1253 1256 7.360776 GCTCCTCAAAATAGTCTGAAGTCAAAG 60.361 40.741 0.00 0.00 0.00 2.77
1254 1257 6.428159 GCTCCTCAAAATAGTCTGAAGTCAAA 59.572 38.462 0.00 0.00 0.00 2.69
1255 1258 5.934625 GCTCCTCAAAATAGTCTGAAGTCAA 59.065 40.000 0.00 0.00 0.00 3.18
1256 1259 5.482908 GCTCCTCAAAATAGTCTGAAGTCA 58.517 41.667 0.00 0.00 0.00 3.41
1257 1260 4.873259 GGCTCCTCAAAATAGTCTGAAGTC 59.127 45.833 0.00 0.00 0.00 3.01
1258 1261 4.534103 AGGCTCCTCAAAATAGTCTGAAGT 59.466 41.667 0.00 0.00 0.00 3.01
1259 1262 5.096443 AGGCTCCTCAAAATAGTCTGAAG 57.904 43.478 0.00 0.00 0.00 3.02
1260 1263 4.780021 AGAGGCTCCTCAAAATAGTCTGAA 59.220 41.667 17.40 0.00 44.99 3.02
1261 1264 4.357325 AGAGGCTCCTCAAAATAGTCTGA 58.643 43.478 17.40 0.00 44.99 3.27
1262 1265 4.751767 AGAGGCTCCTCAAAATAGTCTG 57.248 45.455 17.40 0.00 44.99 3.51
1263 1266 6.875972 TTTAGAGGCTCCTCAAAATAGTCT 57.124 37.500 17.40 0.00 44.99 3.24
1264 1267 9.614792 TTTATTTAGAGGCTCCTCAAAATAGTC 57.385 33.333 17.40 0.00 44.99 2.59
1265 1268 9.975218 TTTTATTTAGAGGCTCCTCAAAATAGT 57.025 29.630 17.40 0.00 44.99 2.12
1269 1272 9.088987 ACAATTTTATTTAGAGGCTCCTCAAAA 57.911 29.630 17.40 13.83 44.99 2.44
1270 1273 8.650143 ACAATTTTATTTAGAGGCTCCTCAAA 57.350 30.769 17.40 14.52 44.99 2.69
1271 1274 9.747898 TTACAATTTTATTTAGAGGCTCCTCAA 57.252 29.630 17.40 1.78 44.99 3.02
1272 1275 9.920946 ATTACAATTTTATTTAGAGGCTCCTCA 57.079 29.630 17.40 0.00 44.99 3.86
1274 1277 9.920946 TCATTACAATTTTATTTAGAGGCTCCT 57.079 29.630 11.71 1.12 0.00 3.69
1299 1302 3.736252 CCGTTACATCATTCGTGAGGATC 59.264 47.826 0.00 0.00 0.00 3.36
1300 1303 3.132289 ACCGTTACATCATTCGTGAGGAT 59.868 43.478 0.00 0.00 0.00 3.24
1301 1304 2.494471 ACCGTTACATCATTCGTGAGGA 59.506 45.455 0.00 0.00 0.00 3.71
1302 1305 2.888594 ACCGTTACATCATTCGTGAGG 58.111 47.619 0.00 0.00 0.00 3.86
1303 1306 7.808381 AGATATAACCGTTACATCATTCGTGAG 59.192 37.037 11.27 0.00 0.00 3.51
1304 1307 7.654568 AGATATAACCGTTACATCATTCGTGA 58.345 34.615 11.27 0.00 0.00 4.35
1305 1308 7.869016 AGATATAACCGTTACATCATTCGTG 57.131 36.000 11.27 0.00 0.00 4.35
1357 1360 6.932960 ACAAGTAATACGTGAGGCTACTTTTT 59.067 34.615 12.96 0.00 34.05 1.94
1358 1361 6.461640 ACAAGTAATACGTGAGGCTACTTTT 58.538 36.000 12.96 0.00 34.05 2.27
1359 1362 6.034161 ACAAGTAATACGTGAGGCTACTTT 57.966 37.500 12.96 0.00 34.05 2.66
1360 1363 5.656213 ACAAGTAATACGTGAGGCTACTT 57.344 39.130 12.96 1.31 35.57 2.24
1361 1364 6.558909 GTTACAAGTAATACGTGAGGCTACT 58.441 40.000 12.96 0.00 31.96 2.57
1362 1365 5.453587 CGTTACAAGTAATACGTGAGGCTAC 59.546 44.000 12.96 3.27 31.96 3.58
1363 1366 5.572211 CGTTACAAGTAATACGTGAGGCTA 58.428 41.667 12.96 0.00 31.96 3.93
1364 1367 4.418392 CGTTACAAGTAATACGTGAGGCT 58.582 43.478 12.96 0.00 31.96 4.58
1365 1368 3.000376 GCGTTACAAGTAATACGTGAGGC 60.000 47.826 12.96 5.39 31.96 4.70
1366 1369 3.239026 CGCGTTACAAGTAATACGTGAGG 59.761 47.826 12.96 0.00 31.20 3.86
1367 1370 4.028990 GTCGCGTTACAAGTAATACGTGAG 60.029 45.833 16.41 3.29 35.92 3.51
1368 1371 3.845775 GTCGCGTTACAAGTAATACGTGA 59.154 43.478 12.96 13.53 34.20 4.35
1369 1372 3.848019 AGTCGCGTTACAAGTAATACGTG 59.152 43.478 5.77 4.84 33.76 4.49
1370 1373 4.083581 AGTCGCGTTACAAGTAATACGT 57.916 40.909 5.77 0.00 32.10 3.57
1371 1374 4.337763 AGAGTCGCGTTACAAGTAATACG 58.662 43.478 5.77 9.77 0.00 3.06
1372 1375 6.410337 CACTAGAGTCGCGTTACAAGTAATAC 59.590 42.308 5.77 0.00 0.00 1.89
1373 1376 6.481134 CACTAGAGTCGCGTTACAAGTAATA 58.519 40.000 5.77 0.00 0.00 0.98
1374 1377 5.330295 CACTAGAGTCGCGTTACAAGTAAT 58.670 41.667 5.77 0.00 0.00 1.89
1375 1378 4.715896 CACTAGAGTCGCGTTACAAGTAA 58.284 43.478 5.77 0.00 0.00 2.24
1376 1379 3.425359 GCACTAGAGTCGCGTTACAAGTA 60.425 47.826 5.77 0.00 0.00 2.24
1377 1380 2.667724 GCACTAGAGTCGCGTTACAAGT 60.668 50.000 5.77 3.06 0.00 3.16
1378 1381 1.912110 GCACTAGAGTCGCGTTACAAG 59.088 52.381 5.77 2.37 0.00 3.16
1379 1382 1.538512 AGCACTAGAGTCGCGTTACAA 59.461 47.619 5.77 0.00 0.00 2.41
1380 1383 1.129998 GAGCACTAGAGTCGCGTTACA 59.870 52.381 5.77 0.00 0.00 2.41
1381 1384 1.531470 GGAGCACTAGAGTCGCGTTAC 60.531 57.143 5.77 0.00 0.00 2.50
1382 1385 0.731417 GGAGCACTAGAGTCGCGTTA 59.269 55.000 5.77 0.00 0.00 3.18
1383 1386 1.241990 TGGAGCACTAGAGTCGCGTT 61.242 55.000 5.77 0.00 0.00 4.84
1384 1387 1.241990 TTGGAGCACTAGAGTCGCGT 61.242 55.000 5.77 0.00 0.00 6.01
1385 1388 0.524392 CTTGGAGCACTAGAGTCGCG 60.524 60.000 0.00 0.00 0.00 5.87
1386 1389 0.528470 ACTTGGAGCACTAGAGTCGC 59.472 55.000 0.00 0.00 0.00 5.19
1387 1390 2.223386 GCTACTTGGAGCACTAGAGTCG 60.223 54.545 0.00 0.00 42.36 4.18
1388 1391 2.100087 GGCTACTTGGAGCACTAGAGTC 59.900 54.545 7.19 0.00 44.76 3.36
1389 1392 2.104170 GGCTACTTGGAGCACTAGAGT 58.896 52.381 7.19 0.00 44.76 3.24
1390 1393 1.410882 GGGCTACTTGGAGCACTAGAG 59.589 57.143 7.19 0.00 42.96 2.43
1391 1394 1.273041 TGGGCTACTTGGAGCACTAGA 60.273 52.381 8.68 0.00 46.65 2.43
1392 1395 1.195115 TGGGCTACTTGGAGCACTAG 58.805 55.000 8.68 0.00 46.65 2.57
1393 1396 1.651737 TTGGGCTACTTGGAGCACTA 58.348 50.000 8.68 0.00 46.65 2.74
1394 1397 0.771127 TTTGGGCTACTTGGAGCACT 59.229 50.000 8.68 0.00 46.65 4.40
1395 1398 1.839424 ATTTGGGCTACTTGGAGCAC 58.161 50.000 7.19 3.38 46.71 4.40
1396 1399 2.843730 TCTATTTGGGCTACTTGGAGCA 59.156 45.455 7.19 0.00 44.76 4.26
1397 1400 3.560636 TCTATTTGGGCTACTTGGAGC 57.439 47.619 0.00 0.00 42.05 4.70
1398 1401 4.039245 TCGATCTATTTGGGCTACTTGGAG 59.961 45.833 0.00 0.00 0.00 3.86
1399 1402 3.964688 TCGATCTATTTGGGCTACTTGGA 59.035 43.478 0.00 0.00 0.00 3.53
1400 1403 4.336889 TCGATCTATTTGGGCTACTTGG 57.663 45.455 0.00 0.00 0.00 3.61
1401 1404 5.788450 AGATCGATCTATTTGGGCTACTTG 58.212 41.667 26.27 0.00 34.85 3.16
1402 1405 6.268847 AGAAGATCGATCTATTTGGGCTACTT 59.731 38.462 27.52 7.70 35.76 2.24
1403 1406 5.777732 AGAAGATCGATCTATTTGGGCTACT 59.222 40.000 27.52 7.91 35.76 2.57
1404 1407 5.866633 CAGAAGATCGATCTATTTGGGCTAC 59.133 44.000 27.52 9.31 35.76 3.58
1405 1408 5.047021 CCAGAAGATCGATCTATTTGGGCTA 60.047 44.000 27.52 0.00 35.76 3.93
1406 1409 4.262808 CCAGAAGATCGATCTATTTGGGCT 60.263 45.833 27.52 9.96 35.76 5.19
1407 1410 3.999663 CCAGAAGATCGATCTATTTGGGC 59.000 47.826 27.52 11.22 35.76 5.36
1408 1411 3.999663 GCCAGAAGATCGATCTATTTGGG 59.000 47.826 32.28 26.24 35.76 4.12
1409 1412 4.892433 AGCCAGAAGATCGATCTATTTGG 58.108 43.478 30.01 30.01 35.76 3.28
1410 1413 4.620609 CGAGCCAGAAGATCGATCTATTTG 59.379 45.833 27.52 22.48 38.72 2.32
1411 1414 4.804108 CGAGCCAGAAGATCGATCTATTT 58.196 43.478 27.52 13.03 38.72 1.40
1412 1415 3.366883 GCGAGCCAGAAGATCGATCTATT 60.367 47.826 27.52 13.81 38.72 1.73
1413 1416 2.163412 GCGAGCCAGAAGATCGATCTAT 59.837 50.000 27.52 16.64 38.72 1.98
1414 1417 1.537638 GCGAGCCAGAAGATCGATCTA 59.462 52.381 27.52 0.00 38.72 1.98
1415 1418 0.313672 GCGAGCCAGAAGATCGATCT 59.686 55.000 22.32 22.32 38.72 2.75
1416 1419 0.665972 GGCGAGCCAGAAGATCGATC 60.666 60.000 17.91 17.91 38.72 3.69
1417 1420 1.112315 AGGCGAGCCAGAAGATCGAT 61.112 55.000 17.18 0.00 38.72 3.59
1418 1421 1.754621 AGGCGAGCCAGAAGATCGA 60.755 57.895 17.18 0.00 38.72 3.59
1419 1422 1.591059 CAGGCGAGCCAGAAGATCG 60.591 63.158 17.18 0.00 38.92 3.69
1420 1423 0.392336 ATCAGGCGAGCCAGAAGATC 59.608 55.000 17.18 0.00 35.27 2.75
1421 1424 0.392336 GATCAGGCGAGCCAGAAGAT 59.608 55.000 17.18 12.84 35.27 2.40
1422 1425 1.819229 GATCAGGCGAGCCAGAAGA 59.181 57.895 17.18 8.71 35.27 2.87
1423 1426 1.591059 CGATCAGGCGAGCCAGAAG 60.591 63.158 17.18 8.63 35.27 2.85
1424 1427 1.395045 ATCGATCAGGCGAGCCAGAA 61.395 55.000 17.18 0.00 44.26 3.02
1425 1428 1.800283 GATCGATCAGGCGAGCCAGA 61.800 60.000 20.52 14.30 44.26 3.86
1426 1429 1.372748 GATCGATCAGGCGAGCCAG 60.373 63.158 20.52 8.65 44.26 4.85
1427 1430 2.127232 TGATCGATCAGGCGAGCCA 61.127 57.895 23.99 0.00 45.24 4.75
1428 1431 1.663074 GTGATCGATCAGGCGAGCC 60.663 63.158 27.95 10.98 45.24 4.70
1429 1432 1.066422 TGTGATCGATCAGGCGAGC 59.934 57.895 27.95 15.38 45.95 5.03
1430 1433 0.596083 GGTGTGATCGATCAGGCGAG 60.596 60.000 27.95 0.00 44.26 5.03
1431 1434 1.037579 AGGTGTGATCGATCAGGCGA 61.038 55.000 27.95 9.97 45.22 5.54
1432 1435 0.596083 GAGGTGTGATCGATCAGGCG 60.596 60.000 27.95 0.00 37.51 5.52
1433 1436 0.249657 GGAGGTGTGATCGATCAGGC 60.250 60.000 27.95 21.32 37.51 4.85
1434 1437 1.068281 CAGGAGGTGTGATCGATCAGG 59.932 57.143 27.95 7.03 37.51 3.86
1435 1438 1.753649 ACAGGAGGTGTGATCGATCAG 59.246 52.381 27.95 15.66 38.28 2.90
1436 1439 1.852633 ACAGGAGGTGTGATCGATCA 58.147 50.000 23.99 23.99 38.28 2.92
1437 1440 2.287909 GCTACAGGAGGTGTGATCGATC 60.288 54.545 18.72 18.72 40.69 3.69
1438 1441 1.683917 GCTACAGGAGGTGTGATCGAT 59.316 52.381 0.00 0.00 40.69 3.59
1439 1442 1.103803 GCTACAGGAGGTGTGATCGA 58.896 55.000 0.00 0.00 40.69 3.59
1440 1443 0.248661 CGCTACAGGAGGTGTGATCG 60.249 60.000 0.00 0.00 40.69 3.69
1441 1444 1.066303 CTCGCTACAGGAGGTGTGATC 59.934 57.143 0.00 0.00 40.69 2.92
1442 1445 1.107114 CTCGCTACAGGAGGTGTGAT 58.893 55.000 0.00 0.00 40.69 3.06
1443 1446 0.251209 ACTCGCTACAGGAGGTGTGA 60.251 55.000 0.00 0.00 40.69 3.58
1444 1447 0.171455 GACTCGCTACAGGAGGTGTG 59.829 60.000 0.00 0.00 40.69 3.82
1445 1448 0.251209 TGACTCGCTACAGGAGGTGT 60.251 55.000 0.00 0.00 43.86 4.16
1446 1449 0.171455 GTGACTCGCTACAGGAGGTG 59.829 60.000 0.00 0.00 35.82 4.00
1447 1450 0.966370 GGTGACTCGCTACAGGAGGT 60.966 60.000 0.00 0.00 35.82 3.85
1448 1451 1.668101 GGGTGACTCGCTACAGGAGG 61.668 65.000 0.00 0.00 35.82 4.30
1449 1452 0.681564 AGGGTGACTCGCTACAGGAG 60.682 60.000 0.00 0.00 37.57 3.69
1450 1453 0.251653 AAGGGTGACTCGCTACAGGA 60.252 55.000 0.00 0.00 38.40 3.86
1451 1454 0.173708 GAAGGGTGACTCGCTACAGG 59.826 60.000 0.00 0.00 38.40 4.00
1452 1455 0.179161 CGAAGGGTGACTCGCTACAG 60.179 60.000 0.00 0.00 38.40 2.74
1453 1456 0.892358 ACGAAGGGTGACTCGCTACA 60.892 55.000 0.00 0.00 38.40 2.74
1454 1457 0.243095 AACGAAGGGTGACTCGCTAC 59.757 55.000 0.00 0.00 38.40 3.58
1455 1458 0.524862 GAACGAAGGGTGACTCGCTA 59.475 55.000 0.00 0.00 38.40 4.26
1456 1459 1.179814 AGAACGAAGGGTGACTCGCT 61.180 55.000 0.00 0.00 41.15 4.93
1457 1460 0.319641 AAGAACGAAGGGTGACTCGC 60.320 55.000 0.00 0.00 0.00 5.03
1458 1461 2.059541 GAAAGAACGAAGGGTGACTCG 58.940 52.381 0.00 0.00 0.00 4.18
1459 1462 3.388345 AGAAAGAACGAAGGGTGACTC 57.612 47.619 0.00 0.00 0.00 3.36
1460 1463 3.134081 TCAAGAAAGAACGAAGGGTGACT 59.866 43.478 0.00 0.00 0.00 3.41
1461 1464 3.463944 TCAAGAAAGAACGAAGGGTGAC 58.536 45.455 0.00 0.00 0.00 3.67
1462 1465 3.494398 CCTCAAGAAAGAACGAAGGGTGA 60.494 47.826 0.00 0.00 0.00 4.02
1463 1466 2.808543 CCTCAAGAAAGAACGAAGGGTG 59.191 50.000 0.00 0.00 0.00 4.61
1464 1467 2.438392 ACCTCAAGAAAGAACGAAGGGT 59.562 45.455 0.00 0.00 0.00 4.34
1465 1468 3.127425 ACCTCAAGAAAGAACGAAGGG 57.873 47.619 0.00 0.00 0.00 3.95
1466 1469 7.386848 TGTTATTACCTCAAGAAAGAACGAAGG 59.613 37.037 0.00 0.00 29.24 3.46
1467 1470 8.221766 GTGTTATTACCTCAAGAAAGAACGAAG 58.778 37.037 0.00 0.00 29.24 3.79
1468 1471 7.172019 GGTGTTATTACCTCAAGAAAGAACGAA 59.828 37.037 0.00 0.00 37.74 3.85
1469 1472 6.647895 GGTGTTATTACCTCAAGAAAGAACGA 59.352 38.462 0.00 0.00 37.74 3.85
1470 1473 6.425721 TGGTGTTATTACCTCAAGAAAGAACG 59.574 38.462 0.00 0.00 41.43 3.95
1471 1474 7.444487 ACTGGTGTTATTACCTCAAGAAAGAAC 59.556 37.037 0.00 0.00 41.43 3.01
1472 1475 7.444183 CACTGGTGTTATTACCTCAAGAAAGAA 59.556 37.037 0.00 0.00 41.43 2.52
1473 1476 6.934645 CACTGGTGTTATTACCTCAAGAAAGA 59.065 38.462 0.00 0.00 41.43 2.52
1474 1477 6.149474 CCACTGGTGTTATTACCTCAAGAAAG 59.851 42.308 0.00 0.00 41.43 2.62
1475 1478 6.001460 CCACTGGTGTTATTACCTCAAGAAA 58.999 40.000 0.00 0.00 41.43 2.52
1476 1479 5.072600 ACCACTGGTGTTATTACCTCAAGAA 59.927 40.000 0.00 0.00 41.43 2.52
1477 1480 4.595781 ACCACTGGTGTTATTACCTCAAGA 59.404 41.667 0.00 0.00 41.43 3.02
1478 1481 4.906618 ACCACTGGTGTTATTACCTCAAG 58.093 43.478 0.00 0.00 41.43 3.02
1479 1482 4.986054 ACCACTGGTGTTATTACCTCAA 57.014 40.909 0.00 0.00 41.43 3.02
1596 1599 7.749126 CACAGTTTACGTCTAAAAATGGGATTC 59.251 37.037 12.66 0.00 37.47 2.52
1601 1604 5.997385 AGCACAGTTTACGTCTAAAAATGG 58.003 37.500 12.66 4.95 36.50 3.16
1641 1644 6.828785 GTCTTTACAAATGGACCCTATGTCAT 59.171 38.462 0.00 0.00 46.38 3.06
1693 1696 4.563993 CGGGACCCACTAGTCATAAAAACA 60.564 45.833 12.15 0.00 38.59 2.83
1710 1713 2.181021 CGTACTGACAGCGGGACC 59.819 66.667 1.25 0.00 29.76 4.46
1735 1738 0.674895 GGTGGAGTGGCTAGCACAAG 60.675 60.000 18.24 0.00 0.00 3.16
2072 2076 9.316730 GCACATGAATATTTGTTTACCATGAAT 57.683 29.630 14.53 0.00 35.32 2.57
2182 2186 5.529060 TGCGCATGAATATTTGTATACCACA 59.471 36.000 5.66 0.00 34.51 4.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.