Multiple sequence alignment - TraesCS2D01G313500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G313500 chr2D 100.000 4661 0 0 1 4661 403348997 403344337 0.000000e+00 8608.0
1 TraesCS2D01G313500 chr2D 92.857 266 18 1 2173 2437 403479339 403479604 7.320000e-103 385.0
2 TraesCS2D01G313500 chr2D 91.346 208 18 0 1854 2061 403479015 403479222 7.630000e-73 285.0
3 TraesCS2D01G313500 chr2D 95.000 140 7 0 3 142 398705654 398705515 2.180000e-53 220.0
4 TraesCS2D01G313500 chr2A 94.125 3234 151 24 1450 4661 540849827 540846611 0.000000e+00 4883.0
5 TraesCS2D01G313500 chr2A 96.110 694 16 6 746 1434 540850501 540849814 0.000000e+00 1122.0
6 TraesCS2D01G313500 chr2A 87.879 528 49 5 154 681 540865860 540865348 1.430000e-169 606.0
7 TraesCS2D01G313500 chr2A 92.481 266 19 1 2173 2437 541776852 541777117 3.400000e-101 379.0
8 TraesCS2D01G313500 chr2A 90.385 208 20 0 1854 2061 541776544 541776751 1.650000e-69 274.0
9 TraesCS2D01G313500 chr2A 88.542 96 8 2 3866 3958 156525767 156525672 3.810000e-21 113.0
10 TraesCS2D01G313500 chr2B 92.828 990 28 15 1474 2453 477529588 477528632 0.000000e+00 1395.0
11 TraesCS2D01G313500 chr2B 92.339 992 52 10 454 1439 477530557 477529584 0.000000e+00 1389.0
12 TraesCS2D01G313500 chr2B 94.556 900 31 9 2657 3553 477528345 477527461 0.000000e+00 1375.0
13 TraesCS2D01G313500 chr2B 89.429 1050 73 10 3620 4661 477527464 477526445 0.000000e+00 1290.0
14 TraesCS2D01G313500 chr2B 92.857 266 18 1 2173 2437 477574344 477574609 7.320000e-103 385.0
15 TraesCS2D01G313500 chr2B 89.904 208 21 0 1854 2061 477574021 477574228 7.690000e-68 268.0
16 TraesCS2D01G313500 chr2B 93.985 133 8 0 1 133 26940905 26941037 7.910000e-48 202.0
17 TraesCS2D01G313500 chr2B 88.889 171 8 6 2486 2656 477528570 477528411 2.840000e-47 200.0
18 TraesCS2D01G313500 chr2B 97.561 41 1 0 2541 2581 477528636 477528596 2.330000e-08 71.3
19 TraesCS2D01G313500 chr4D 82.333 583 73 21 1854 2427 393636552 393637113 3.260000e-131 479.0
20 TraesCS2D01G313500 chr4D 91.635 263 22 0 2173 2435 28839750 28840012 9.530000e-97 364.0
21 TraesCS2D01G313500 chr4D 90.909 220 20 0 1857 2076 28839450 28839669 3.530000e-76 296.0
22 TraesCS2D01G313500 chr4D 90.521 211 19 1 1207 1417 28560230 28560439 1.280000e-70 278.0
23 TraesCS2D01G313500 chr4D 90.000 210 21 0 1207 1416 28837079 28837288 5.940000e-69 272.0
24 TraesCS2D01G313500 chr4D 90.000 210 19 2 1207 1415 393635965 393636173 2.140000e-68 270.0
25 TraesCS2D01G313500 chr4D 86.916 214 27 1 1535 1748 393636266 393636478 6.030000e-59 239.0
26 TraesCS2D01G313500 chr4D 89.130 92 7 3 3865 3953 258897758 258897667 1.370000e-20 111.0
27 TraesCS2D01G313500 chr4B 82.241 580 76 20 1856 2430 483334558 483334001 4.220000e-130 475.0
28 TraesCS2D01G313500 chr4B 91.892 259 21 0 2173 2431 41012876 41013134 3.430000e-96 363.0
29 TraesCS2D01G313500 chr4B 91.364 220 19 0 1857 2076 41012544 41012763 7.580000e-78 302.0
30 TraesCS2D01G313500 chr4B 91.388 209 18 0 1207 1415 41010039 41010247 2.120000e-73 287.0
31 TraesCS2D01G313500 chr4B 87.383 214 26 1 1535 1748 483334955 483334743 1.300000e-60 244.0
32 TraesCS2D01G313500 chr4B 90.323 93 6 3 3866 3955 23660868 23660776 8.190000e-23 119.0
33 TraesCS2D01G313500 chr4B 83.333 120 17 3 4483 4600 603147869 603147751 1.770000e-19 108.0
34 TraesCS2D01G313500 chr4A 90.734 259 24 0 2173 2431 574870088 574869830 3.450000e-91 346.0
35 TraesCS2D01G313500 chr4A 90.909 220 20 0 1857 2076 574870423 574870204 3.530000e-76 296.0
36 TraesCS2D01G313500 chr4A 90.995 211 19 0 1207 1417 574872617 574872407 7.630000e-73 285.0
37 TraesCS2D01G313500 chr4A 90.141 213 21 0 1207 1419 75215126 75214914 1.280000e-70 278.0
38 TraesCS2D01G313500 chr4A 89.202 213 20 3 1535 1746 574870722 574870512 3.580000e-66 263.0
39 TraesCS2D01G313500 chr4A 86.792 212 28 0 1535 1746 75214825 75214614 2.170000e-58 237.0
40 TraesCS2D01G313500 chr4A 87.081 209 25 2 1535 1742 641451582 641451789 7.800000e-58 235.0
41 TraesCS2D01G313500 chr3B 91.388 209 18 0 1207 1415 9914558 9914766 2.120000e-73 287.0
42 TraesCS2D01G313500 chr3B 88.776 98 8 3 3865 3959 820446010 820445913 2.950000e-22 117.0
43 TraesCS2D01G313500 chr3B 81.429 70 10 3 4505 4573 742000311 742000378 2.000000e-03 54.7
44 TraesCS2D01G313500 chr5B 87.019 208 27 0 1535 1742 670067632 670067425 7.800000e-58 235.0
45 TraesCS2D01G313500 chr1D 92.254 142 11 0 1 142 13192002 13191861 7.910000e-48 202.0
46 TraesCS2D01G313500 chr1D 91.549 142 12 0 1 142 9292115 9291974 3.680000e-46 196.0
47 TraesCS2D01G313500 chr1D 95.714 70 2 1 3865 3933 337065188 337065257 1.370000e-20 111.0
48 TraesCS2D01G313500 chr5D 91.608 143 12 0 1 143 526965660 526965518 1.020000e-46 198.0
49 TraesCS2D01G313500 chr5D 91.034 145 13 0 1 145 401035967 401035823 3.680000e-46 196.0
50 TraesCS2D01G313500 chr5D 90.000 90 7 2 3860 3947 469554767 469554856 1.060000e-21 115.0
51 TraesCS2D01G313500 chr5D 90.698 86 5 3 3867 3949 18193789 18193874 1.370000e-20 111.0
52 TraesCS2D01G313500 chr5D 79.333 150 26 4 580 726 7986264 7986117 2.970000e-17 100.0
53 TraesCS2D01G313500 chr7D 91.549 142 12 0 1 142 44653176 44653317 3.680000e-46 196.0
54 TraesCS2D01G313500 chr7D 90.845 142 13 0 1 142 598096244 598096103 1.710000e-44 191.0
55 TraesCS2D01G313500 chrUn 90.909 143 13 0 1 143 46096362 46096504 4.760000e-45 193.0
56 TraesCS2D01G313500 chr5A 91.667 84 5 2 3865 3946 367595301 367595218 1.060000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G313500 chr2D 403344337 403348997 4660 True 8608.000000 8608 100.000000 1 4661 1 chr2D.!!$R2 4660
1 TraesCS2D01G313500 chr2D 403479015 403479604 589 False 335.000000 385 92.101500 1854 2437 2 chr2D.!!$F1 583
2 TraesCS2D01G313500 chr2A 540846611 540850501 3890 True 3002.500000 4883 95.117500 746 4661 2 chr2A.!!$R3 3915
3 TraesCS2D01G313500 chr2A 540865348 540865860 512 True 606.000000 606 87.879000 154 681 1 chr2A.!!$R2 527
4 TraesCS2D01G313500 chr2A 541776544 541777117 573 False 326.500000 379 91.433000 1854 2437 2 chr2A.!!$F1 583
5 TraesCS2D01G313500 chr2B 477526445 477530557 4112 True 953.383333 1395 92.600333 454 4661 6 chr2B.!!$R1 4207
6 TraesCS2D01G313500 chr2B 477574021 477574609 588 False 326.500000 385 91.380500 1854 2437 2 chr2B.!!$F2 583
7 TraesCS2D01G313500 chr4D 393635965 393637113 1148 False 329.333333 479 86.416333 1207 2427 3 chr4D.!!$F3 1220
8 TraesCS2D01G313500 chr4D 28837079 28840012 2933 False 310.666667 364 90.848000 1207 2435 3 chr4D.!!$F2 1228
9 TraesCS2D01G313500 chr4B 483334001 483334955 954 True 359.500000 475 84.812000 1535 2430 2 chr4B.!!$R3 895
10 TraesCS2D01G313500 chr4B 41010039 41013134 3095 False 317.333333 363 91.548000 1207 2431 3 chr4B.!!$F1 1224
11 TraesCS2D01G313500 chr4A 574869830 574872617 2787 True 297.500000 346 90.460000 1207 2431 4 chr4A.!!$R2 1224
12 TraesCS2D01G313500 chr4A 75214614 75215126 512 True 257.500000 278 88.466500 1207 1746 2 chr4A.!!$R1 539

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
95 96 0.028902 GAGTGTCCGTGTTTTGGCAC 59.971 55.0 0.00 0.00 35.27 5.01 F
118 119 0.107508 ATGAAGAGCATGACACCCGG 60.108 55.0 0.00 0.00 35.42 5.73 F
130 131 0.177604 ACACCCGGTGTACGTGAAAA 59.822 50.0 22.15 0.00 45.56 2.29 F
643 650 0.250234 TGCATGCCTAGAGTTTCGCT 59.750 50.0 16.68 0.00 0.00 4.93 F
1070 1082 0.378962 CCCTCTCTTCTCGTAGCACG 59.621 60.0 2.79 2.79 44.19 5.34 F
1078 1090 0.664224 TCTCGTAGCACGACACAACA 59.336 50.0 7.20 0.00 46.73 3.33 F
2756 5682 0.663153 AGCAAAGAAACACGAGTGGC 59.337 50.0 8.19 0.00 34.19 5.01 F
3153 6081 1.021968 GGATTGTTCCGGCATACACC 58.978 55.0 0.00 0.00 30.72 4.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1073 1085 1.291877 GATCAGCTCGCCGTTGTTGT 61.292 55.000 0.00 0.00 0.00 3.32 R
1074 1086 1.421485 GATCAGCTCGCCGTTGTTG 59.579 57.895 0.00 0.00 0.00 3.33 R
1292 1304 1.595993 CGAAGGAGGCGAGGTTCAGA 61.596 60.000 0.00 0.00 0.00 3.27 R
2400 5228 0.180406 AGTTGAGCGTGAAGGTTGGT 59.820 50.000 0.00 0.00 0.00 3.67 R
2750 5676 0.682209 ATGAAGTGCATGGGCCACTC 60.682 55.000 9.28 3.73 40.13 3.51 R
2940 5868 1.430632 CTTGTAGCCCTGCATTGCG 59.569 57.895 3.84 0.00 0.00 4.85 R
3648 6578 0.456824 TCGCAGAGCACTTAGAAGCG 60.457 55.000 6.49 6.49 44.45 4.68 R
4614 7558 0.680061 GAGGGCTCCCATAGTTACCG 59.320 60.000 7.82 0.00 38.92 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.616969 GCAGTGACGGCAAAGAAGA 58.383 52.632 2.09 0.00 0.00 2.87
19 20 0.235926 GCAGTGACGGCAAAGAAGAC 59.764 55.000 2.09 0.00 0.00 3.01
20 21 1.581934 CAGTGACGGCAAAGAAGACA 58.418 50.000 0.00 0.00 0.00 3.41
21 22 1.528586 CAGTGACGGCAAAGAAGACAG 59.471 52.381 0.00 0.00 0.00 3.51
22 23 1.139058 AGTGACGGCAAAGAAGACAGT 59.861 47.619 0.00 0.00 0.00 3.55
23 24 1.940613 GTGACGGCAAAGAAGACAGTT 59.059 47.619 0.00 0.00 0.00 3.16
24 25 2.354821 GTGACGGCAAAGAAGACAGTTT 59.645 45.455 0.00 0.00 0.00 2.66
25 26 2.354510 TGACGGCAAAGAAGACAGTTTG 59.645 45.455 0.00 0.00 36.84 2.93
30 31 2.719798 CAAAGAAGACAGTTTGCCGTG 58.280 47.619 0.00 0.00 0.00 4.94
31 32 2.325583 AAGAAGACAGTTTGCCGTGA 57.674 45.000 0.00 0.00 0.00 4.35
32 33 2.325583 AGAAGACAGTTTGCCGTGAA 57.674 45.000 0.00 0.00 0.00 3.18
33 34 2.213499 AGAAGACAGTTTGCCGTGAAG 58.787 47.619 0.00 0.00 0.00 3.02
34 35 0.663153 AAGACAGTTTGCCGTGAAGC 59.337 50.000 0.00 0.00 0.00 3.86
35 36 0.179045 AGACAGTTTGCCGTGAAGCT 60.179 50.000 0.00 0.00 0.00 3.74
36 37 0.040958 GACAGTTTGCCGTGAAGCTG 60.041 55.000 6.11 6.11 39.39 4.24
37 38 1.283793 CAGTTTGCCGTGAAGCTGG 59.716 57.895 0.00 0.00 32.23 4.85
38 39 1.898574 AGTTTGCCGTGAAGCTGGG 60.899 57.895 0.00 0.00 0.00 4.45
39 40 2.193536 GTTTGCCGTGAAGCTGGGT 61.194 57.895 0.00 0.00 0.00 4.51
40 41 1.454847 TTTGCCGTGAAGCTGGGTT 60.455 52.632 0.00 0.00 0.00 4.11
41 42 1.040339 TTTGCCGTGAAGCTGGGTTT 61.040 50.000 0.00 0.00 0.00 3.27
42 43 1.733402 TTGCCGTGAAGCTGGGTTTG 61.733 55.000 0.00 0.00 0.00 2.93
43 44 2.644992 CCGTGAAGCTGGGTTTGC 59.355 61.111 0.00 0.00 0.00 3.68
44 45 2.644992 CGTGAAGCTGGGTTTGCC 59.355 61.111 0.00 0.00 0.00 4.52
45 46 2.644992 GTGAAGCTGGGTTTGCCG 59.355 61.111 0.00 0.00 34.97 5.69
46 47 1.896660 GTGAAGCTGGGTTTGCCGA 60.897 57.895 0.00 0.00 34.97 5.54
47 48 1.600636 TGAAGCTGGGTTTGCCGAG 60.601 57.895 0.00 0.00 42.66 4.63
48 49 1.302511 GAAGCTGGGTTTGCCGAGA 60.303 57.895 0.00 0.00 42.42 4.04
49 50 1.301677 GAAGCTGGGTTTGCCGAGAG 61.302 60.000 0.00 0.00 42.42 3.20
50 51 2.032681 GCTGGGTTTGCCGAGAGT 59.967 61.111 0.00 0.00 42.42 3.24
51 52 2.328099 GCTGGGTTTGCCGAGAGTG 61.328 63.158 0.00 0.00 42.42 3.51
52 53 1.371183 CTGGGTTTGCCGAGAGTGA 59.629 57.895 0.00 0.00 42.42 3.41
53 54 0.951040 CTGGGTTTGCCGAGAGTGAC 60.951 60.000 0.00 0.00 42.42 3.67
54 55 1.070786 GGGTTTGCCGAGAGTGACA 59.929 57.895 0.00 0.00 34.97 3.58
55 56 1.228657 GGGTTTGCCGAGAGTGACAC 61.229 60.000 0.00 0.00 34.97 3.67
56 57 0.249911 GGTTTGCCGAGAGTGACACT 60.250 55.000 8.12 8.12 0.00 3.55
57 58 1.140816 GTTTGCCGAGAGTGACACTC 58.859 55.000 25.27 25.27 45.38 3.51
67 68 3.626028 GAGTGACACTCGGCAAATTTT 57.374 42.857 19.41 0.00 35.28 1.82
68 69 3.964909 GAGTGACACTCGGCAAATTTTT 58.035 40.909 19.41 0.00 35.28 1.94
69 70 3.964909 AGTGACACTCGGCAAATTTTTC 58.035 40.909 1.07 0.00 0.00 2.29
70 71 3.632145 AGTGACACTCGGCAAATTTTTCT 59.368 39.130 1.07 0.00 0.00 2.52
71 72 4.097892 AGTGACACTCGGCAAATTTTTCTT 59.902 37.500 1.07 0.00 0.00 2.52
72 73 4.803613 GTGACACTCGGCAAATTTTTCTTT 59.196 37.500 0.00 0.00 0.00 2.52
73 74 4.803088 TGACACTCGGCAAATTTTTCTTTG 59.197 37.500 0.00 0.00 38.79 2.77
82 83 5.315118 CAAATTTTTCTTTGCCGAGTGTC 57.685 39.130 0.00 0.00 30.06 3.67
83 84 3.643159 ATTTTTCTTTGCCGAGTGTCC 57.357 42.857 0.00 0.00 0.00 4.02
84 85 0.941542 TTTTCTTTGCCGAGTGTCCG 59.058 50.000 0.00 0.00 0.00 4.79
85 86 0.179067 TTTCTTTGCCGAGTGTCCGT 60.179 50.000 0.00 0.00 0.00 4.69
86 87 0.878523 TTCTTTGCCGAGTGTCCGTG 60.879 55.000 0.00 0.00 0.00 4.94
87 88 1.594293 CTTTGCCGAGTGTCCGTGT 60.594 57.895 0.00 0.00 0.00 4.49
88 89 1.153329 TTTGCCGAGTGTCCGTGTT 60.153 52.632 0.00 0.00 0.00 3.32
89 90 0.745128 TTTGCCGAGTGTCCGTGTTT 60.745 50.000 0.00 0.00 0.00 2.83
90 91 0.745128 TTGCCGAGTGTCCGTGTTTT 60.745 50.000 0.00 0.00 0.00 2.43
91 92 1.278637 GCCGAGTGTCCGTGTTTTG 59.721 57.895 0.00 0.00 0.00 2.44
92 93 1.938861 CCGAGTGTCCGTGTTTTGG 59.061 57.895 0.00 0.00 0.00 3.28
93 94 1.278637 CGAGTGTCCGTGTTTTGGC 59.721 57.895 0.00 0.00 0.00 4.52
94 95 1.433053 CGAGTGTCCGTGTTTTGGCA 61.433 55.000 0.00 0.00 0.00 4.92
95 96 0.028902 GAGTGTCCGTGTTTTGGCAC 59.971 55.000 0.00 0.00 35.27 5.01
96 97 0.393808 AGTGTCCGTGTTTTGGCACT 60.394 50.000 0.00 0.00 38.31 4.40
97 98 0.454196 GTGTCCGTGTTTTGGCACTT 59.546 50.000 0.00 0.00 37.24 3.16
98 99 0.453793 TGTCCGTGTTTTGGCACTTG 59.546 50.000 0.00 0.00 37.24 3.16
99 100 0.736053 GTCCGTGTTTTGGCACTTGA 59.264 50.000 0.00 0.00 37.24 3.02
100 101 1.336755 GTCCGTGTTTTGGCACTTGAT 59.663 47.619 0.00 0.00 37.24 2.57
101 102 1.336440 TCCGTGTTTTGGCACTTGATG 59.664 47.619 0.00 0.00 37.24 3.07
102 103 1.336440 CCGTGTTTTGGCACTTGATGA 59.664 47.619 0.00 0.00 37.24 2.92
103 104 2.223688 CCGTGTTTTGGCACTTGATGAA 60.224 45.455 0.00 0.00 37.24 2.57
104 105 3.044986 CGTGTTTTGGCACTTGATGAAG 58.955 45.455 0.00 0.00 37.24 3.02
105 106 3.243035 CGTGTTTTGGCACTTGATGAAGA 60.243 43.478 0.00 0.00 37.24 2.87
106 107 4.293415 GTGTTTTGGCACTTGATGAAGAG 58.707 43.478 0.00 0.00 36.51 2.85
107 108 3.243501 TGTTTTGGCACTTGATGAAGAGC 60.244 43.478 5.80 5.80 43.05 4.09
108 109 2.275134 TTGGCACTTGATGAAGAGCA 57.725 45.000 15.30 0.53 44.91 4.26
109 110 2.502142 TGGCACTTGATGAAGAGCAT 57.498 45.000 15.30 0.00 44.91 3.79
110 111 2.089201 TGGCACTTGATGAAGAGCATG 58.911 47.619 15.30 0.00 44.91 4.06
111 112 2.290450 TGGCACTTGATGAAGAGCATGA 60.290 45.455 15.30 0.00 44.91 3.07
112 113 2.097142 GGCACTTGATGAAGAGCATGAC 59.903 50.000 15.30 0.00 44.91 3.06
113 114 2.745821 GCACTTGATGAAGAGCATGACA 59.254 45.455 9.29 0.00 43.21 3.58
114 115 3.425892 GCACTTGATGAAGAGCATGACAC 60.426 47.826 9.29 0.00 43.21 3.67
115 116 3.126514 CACTTGATGAAGAGCATGACACC 59.873 47.826 0.00 0.00 37.34 4.16
116 117 2.408271 TGATGAAGAGCATGACACCC 57.592 50.000 0.00 0.00 37.34 4.61
117 118 1.293924 GATGAAGAGCATGACACCCG 58.706 55.000 0.00 0.00 37.34 5.28
118 119 0.107508 ATGAAGAGCATGACACCCGG 60.108 55.000 0.00 0.00 35.42 5.73
119 120 1.296715 GAAGAGCATGACACCCGGT 59.703 57.895 0.00 0.00 0.00 5.28
120 121 1.003355 AAGAGCATGACACCCGGTG 60.003 57.895 16.47 16.47 39.75 4.94
128 129 3.536164 ACACCCGGTGTACGTGAA 58.464 55.556 22.15 0.00 45.56 3.18
129 130 1.821936 ACACCCGGTGTACGTGAAA 59.178 52.632 22.15 0.00 45.56 2.69
130 131 0.177604 ACACCCGGTGTACGTGAAAA 59.822 50.000 22.15 0.00 45.56 2.29
131 132 1.202675 ACACCCGGTGTACGTGAAAAT 60.203 47.619 22.15 0.00 45.56 1.82
132 133 1.874872 CACCCGGTGTACGTGAAAATT 59.125 47.619 9.64 0.00 42.24 1.82
133 134 2.291190 CACCCGGTGTACGTGAAAATTT 59.709 45.455 9.64 0.00 42.24 1.82
134 135 2.950975 ACCCGGTGTACGTGAAAATTTT 59.049 40.909 2.28 2.28 42.24 1.82
135 136 4.024218 CACCCGGTGTACGTGAAAATTTTA 60.024 41.667 9.64 0.00 42.24 1.52
136 137 4.213906 ACCCGGTGTACGTGAAAATTTTAG 59.786 41.667 2.75 1.49 42.24 1.85
137 138 4.213906 CCCGGTGTACGTGAAAATTTTAGT 59.786 41.667 2.75 7.31 42.24 2.24
138 139 5.407995 CCCGGTGTACGTGAAAATTTTAGTA 59.592 40.000 2.75 6.38 42.24 1.82
139 140 6.401367 CCCGGTGTACGTGAAAATTTTAGTAG 60.401 42.308 2.75 0.00 42.24 2.57
140 141 6.146021 CCGGTGTACGTGAAAATTTTAGTAGT 59.854 38.462 2.75 4.97 42.24 2.73
141 142 7.005380 CGGTGTACGTGAAAATTTTAGTAGTG 58.995 38.462 2.75 0.00 37.93 2.74
142 143 6.793680 GGTGTACGTGAAAATTTTAGTAGTGC 59.206 38.462 2.75 6.46 0.00 4.40
143 144 6.793680 GTGTACGTGAAAATTTTAGTAGTGCC 59.206 38.462 2.75 0.00 0.00 5.01
144 145 6.707161 TGTACGTGAAAATTTTAGTAGTGCCT 59.293 34.615 2.75 0.00 0.00 4.75
145 146 5.997385 ACGTGAAAATTTTAGTAGTGCCTG 58.003 37.500 2.75 0.00 0.00 4.85
146 147 5.048991 ACGTGAAAATTTTAGTAGTGCCTGG 60.049 40.000 2.75 0.00 0.00 4.45
147 148 5.180492 CGTGAAAATTTTAGTAGTGCCTGGA 59.820 40.000 2.75 0.00 0.00 3.86
148 149 6.128007 CGTGAAAATTTTAGTAGTGCCTGGAT 60.128 38.462 2.75 0.00 0.00 3.41
149 150 7.574967 CGTGAAAATTTTAGTAGTGCCTGGATT 60.575 37.037 2.75 0.00 0.00 3.01
150 151 7.755373 GTGAAAATTTTAGTAGTGCCTGGATTC 59.245 37.037 2.75 0.00 0.00 2.52
151 152 6.436843 AAATTTTAGTAGTGCCTGGATTCG 57.563 37.500 0.00 0.00 0.00 3.34
152 153 4.811969 TTTTAGTAGTGCCTGGATTCGA 57.188 40.909 0.00 0.00 0.00 3.71
204 205 6.052360 TGAAAATGTCACAGTTACTAGTGCA 58.948 36.000 5.39 10.18 35.76 4.57
206 207 6.486253 AAATGTCACAGTTACTAGTGCATG 57.514 37.500 5.39 3.64 34.84 4.06
216 217 3.386768 ACTAGTGCATGTTTGTCGAGT 57.613 42.857 0.00 0.00 0.00 4.18
231 232 7.389330 TGTTTGTCGAGTTGTGTATTGGATATT 59.611 33.333 0.00 0.00 0.00 1.28
248 249 7.399245 TGGATATTAAGTGTAAAAACCTGGC 57.601 36.000 0.00 0.00 0.00 4.85
249 250 6.378848 TGGATATTAAGTGTAAAAACCTGGCC 59.621 38.462 0.00 0.00 0.00 5.36
301 302 6.676456 GCAGGTAGCAAGAAAATCAGTATGTG 60.676 42.308 0.00 0.00 44.79 3.21
339 340 2.418368 TTCCAGCGCATACATTTCCT 57.582 45.000 11.47 0.00 0.00 3.36
342 343 1.745087 CCAGCGCATACATTTCCTTGT 59.255 47.619 11.47 0.00 0.00 3.16
343 344 2.942376 CCAGCGCATACATTTCCTTGTA 59.058 45.455 11.47 0.00 36.57 2.41
344 345 3.376859 CCAGCGCATACATTTCCTTGTAA 59.623 43.478 11.47 0.00 35.80 2.41
345 346 4.496341 CCAGCGCATACATTTCCTTGTAAG 60.496 45.833 11.47 0.00 35.80 2.34
346 347 4.332543 CAGCGCATACATTTCCTTGTAAGA 59.667 41.667 11.47 0.00 35.80 2.10
347 348 5.008019 CAGCGCATACATTTCCTTGTAAGAT 59.992 40.000 11.47 0.00 35.80 2.40
348 349 5.590259 AGCGCATACATTTCCTTGTAAGATT 59.410 36.000 11.47 0.00 35.80 2.40
349 350 5.909610 GCGCATACATTTCCTTGTAAGATTC 59.090 40.000 0.30 0.00 35.80 2.52
350 351 6.458206 GCGCATACATTTCCTTGTAAGATTCA 60.458 38.462 0.30 0.00 35.80 2.57
351 352 7.642669 CGCATACATTTCCTTGTAAGATTCAT 58.357 34.615 0.00 0.00 35.80 2.57
352 353 8.773645 CGCATACATTTCCTTGTAAGATTCATA 58.226 33.333 0.00 0.00 35.80 2.15
390 391 9.416284 GATAATATACAAGGTTGGAAAAAGGGA 57.584 33.333 0.00 0.00 0.00 4.20
392 393 7.660030 ATATACAAGGTTGGAAAAAGGGATG 57.340 36.000 0.00 0.00 0.00 3.51
395 396 0.613260 GGTTGGAAAAAGGGATGGGC 59.387 55.000 0.00 0.00 0.00 5.36
400 401 1.621317 GGAAAAAGGGATGGGCGAAAA 59.379 47.619 0.00 0.00 0.00 2.29
406 407 2.761195 GGATGGGCGAAAACGAGGC 61.761 63.158 0.00 0.00 0.00 4.70
424 425 1.810030 CGGTTGACCTTCGCCTAGC 60.810 63.158 0.00 0.00 0.00 3.42
438 439 1.218047 CTAGCGCTTAGGTGGTGCA 59.782 57.895 18.68 0.00 41.94 4.57
476 477 7.066284 GCTGGATGTACAATTTTGACTATCAGT 59.934 37.037 0.00 0.00 0.00 3.41
477 478 8.862325 TGGATGTACAATTTTGACTATCAGTT 57.138 30.769 0.00 0.00 0.00 3.16
551 558 8.543774 CATGAGTAAGCTACTAGTTATTGCAAC 58.456 37.037 0.00 4.43 39.59 4.17
600 607 3.605056 GTGCAACATGACATGATTTCACG 59.395 43.478 22.19 0.00 36.32 4.35
601 608 3.252944 TGCAACATGACATGATTTCACGT 59.747 39.130 22.19 0.00 0.00 4.49
604 611 5.387649 GCAACATGACATGATTTCACGTTTG 60.388 40.000 22.19 12.59 27.22 2.93
643 650 0.250234 TGCATGCCTAGAGTTTCGCT 59.750 50.000 16.68 0.00 0.00 4.93
644 651 0.933796 GCATGCCTAGAGTTTCGCTC 59.066 55.000 6.36 0.00 44.45 5.03
660 667 1.135373 CGCTCATGTCTTACACGAGGT 60.135 52.381 5.42 0.00 38.71 3.85
722 729 1.134759 CCGGCATTGCATTTTCCATCA 60.135 47.619 11.39 0.00 0.00 3.07
797 805 1.002468 CGAAACACAGAAGCAACAGGG 60.002 52.381 0.00 0.00 0.00 4.45
931 943 2.046285 CATCCCCCAAGAACCGTGC 61.046 63.158 0.00 0.00 0.00 5.34
1066 1078 1.673920 GCTCACCCTCTCTTCTCGTAG 59.326 57.143 0.00 0.00 0.00 3.51
1067 1079 1.673920 CTCACCCTCTCTTCTCGTAGC 59.326 57.143 0.00 0.00 0.00 3.58
1070 1082 0.378962 CCCTCTCTTCTCGTAGCACG 59.621 60.000 2.79 2.79 44.19 5.34
1072 1084 1.062880 CCTCTCTTCTCGTAGCACGAC 59.937 57.143 7.20 0.00 46.73 4.34
1073 1085 1.732809 CTCTCTTCTCGTAGCACGACA 59.267 52.381 7.20 0.00 46.73 4.35
1074 1086 1.463831 TCTCTTCTCGTAGCACGACAC 59.536 52.381 7.20 0.00 46.73 3.67
1075 1087 1.197036 CTCTTCTCGTAGCACGACACA 59.803 52.381 7.20 0.00 46.73 3.72
1076 1088 1.605232 TCTTCTCGTAGCACGACACAA 59.395 47.619 7.20 1.84 46.73 3.33
1077 1089 1.714460 CTTCTCGTAGCACGACACAAC 59.286 52.381 7.20 0.00 46.73 3.32
1078 1090 0.664224 TCTCGTAGCACGACACAACA 59.336 50.000 7.20 0.00 46.73 3.33
1086 1098 2.235016 ACGACACAACAACGGCGAG 61.235 57.895 16.62 8.41 0.00 5.03
1431 1443 8.997734 AGTTCCAGGTATCTTTCTATCATTTCT 58.002 33.333 0.00 0.00 0.00 2.52
1458 1470 9.768215 TTTTTGAGGGAAAGGTATCTATCATTT 57.232 29.630 0.00 0.00 0.00 2.32
1460 1472 6.759272 TGAGGGAAAGGTATCTATCATTTCG 58.241 40.000 0.00 0.00 36.75 3.46
1462 1474 7.138054 AGGGAAAGGTATCTATCATTTCGTT 57.862 36.000 0.00 0.00 36.75 3.85
1464 1476 6.145696 GGGAAAGGTATCTATCATTTCGTTCG 59.854 42.308 0.00 0.00 36.75 3.95
1466 1478 7.096147 GGAAAGGTATCTATCATTTCGTTCGTC 60.096 40.741 0.00 0.00 36.75 4.20
1765 4455 3.582444 ACTAGTAATCGAGTACACGCG 57.418 47.619 23.45 3.53 40.49 6.01
1819 4515 3.191162 CGGCAGGATTCAAAGTCAATCAA 59.809 43.478 0.00 0.00 32.65 2.57
2160 4961 2.081462 GATCGATCGGTTGGTTTGGTT 58.919 47.619 16.41 0.00 0.00 3.67
2165 4966 1.611519 TCGGTTGGTTTGGTTGATCC 58.388 50.000 0.00 0.00 0.00 3.36
2446 5274 2.719774 GGTACAACACCGTACGCGC 61.720 63.158 10.49 0.00 42.25 6.86
2469 5297 3.738281 CGATCAATCGGTTGGCTAGTTCT 60.738 47.826 8.88 0.00 45.93 3.01
2470 5298 3.695830 TCAATCGGTTGGCTAGTTCTT 57.304 42.857 8.88 0.00 35.99 2.52
2471 5299 3.596214 TCAATCGGTTGGCTAGTTCTTC 58.404 45.455 8.88 0.00 35.99 2.87
2474 5302 1.001633 TCGGTTGGCTAGTTCTTCCAC 59.998 52.381 0.00 0.00 0.00 4.02
2477 5305 3.306502 CGGTTGGCTAGTTCTTCCACTAA 60.307 47.826 0.00 0.00 0.00 2.24
2499 5356 9.174166 ACTAAGTTTTGAAGTAAGTTGATGTGT 57.826 29.630 0.00 0.00 0.00 3.72
2735 5661 5.276461 ACATGTGTTAACTCTGTGTCTGA 57.724 39.130 7.22 0.00 0.00 3.27
2750 5676 3.786048 GTGTCTGAAAGCAAAGAAACACG 59.214 43.478 0.00 0.00 31.92 4.49
2756 5682 0.663153 AGCAAAGAAACACGAGTGGC 59.337 50.000 8.19 0.00 34.19 5.01
3153 6081 1.021968 GGATTGTTCCGGCATACACC 58.978 55.000 0.00 0.00 30.72 4.16
3165 6093 2.818169 ATACACCATGCCCGCCGAT 61.818 57.895 0.00 0.00 0.00 4.18
3219 6147 4.070552 GAGGACTTCAGCCGCGGT 62.071 66.667 28.70 11.01 0.00 5.68
3247 6175 2.501610 GCCTCATCACCGACCTCC 59.498 66.667 0.00 0.00 0.00 4.30
3249 6177 1.517832 CCTCATCACCGACCTCCAC 59.482 63.158 0.00 0.00 0.00 4.02
3276 6204 3.188786 GTGGAGATGGACGCGCAC 61.189 66.667 5.73 0.00 0.00 5.34
3436 6366 4.218312 GTGGAGGAATAATTCTTGGCCAT 58.782 43.478 6.09 0.00 0.00 4.40
3437 6367 5.385198 GTGGAGGAATAATTCTTGGCCATA 58.615 41.667 6.09 0.00 0.00 2.74
3478 6408 6.626623 GCATATGTTGGCTCATTTCTTGTTCT 60.627 38.462 4.29 0.00 0.00 3.01
3523 6453 8.118607 AGTAAGTGTTCGTTTTAAGTTTAGCAC 58.881 33.333 0.00 0.00 0.00 4.40
3557 6487 6.113411 GTGCTTAGTTATGTATGTTCCCACT 58.887 40.000 0.00 0.00 0.00 4.00
3558 6488 6.037172 GTGCTTAGTTATGTATGTTCCCACTG 59.963 42.308 0.00 0.00 0.00 3.66
3722 6652 0.376502 GCCGCTGAAGATTCTTCTGC 59.623 55.000 32.24 32.24 39.16 4.26
3741 6671 0.606401 CCACCTCGCCTCATGTTGTT 60.606 55.000 0.00 0.00 0.00 2.83
3829 6759 6.864360 ATCTATCAAGAAGAGAGCATTTGC 57.136 37.500 0.00 0.00 35.53 3.68
3873 6803 2.375509 CACCCAACTTTCCTACTCCCTT 59.624 50.000 0.00 0.00 0.00 3.95
3874 6804 2.643304 ACCCAACTTTCCTACTCCCTTC 59.357 50.000 0.00 0.00 0.00 3.46
3905 6835 9.425893 CATAATATAAGAGCGTTTTTGACACTG 57.574 33.333 0.00 0.00 0.00 3.66
3937 6867 8.264632 GTGTAAAAACGCTCTTATATTACGAGG 58.735 37.037 0.00 0.00 0.00 4.63
3938 6868 6.839820 AAAAACGCTCTTATATTACGAGGG 57.160 37.500 0.00 0.00 41.71 4.30
3965 6897 8.914011 GGGGAGTAAAATATAAGCACAAGAAAT 58.086 33.333 0.00 0.00 0.00 2.17
4077 7014 8.186163 TGCATGAAGAAATAGTTGCTTATGAAG 58.814 33.333 0.00 0.00 0.00 3.02
4102 7039 5.697067 TGTTTGGTTATCACTTAGTGGGTT 58.303 37.500 12.79 0.99 33.87 4.11
4106 7043 6.134535 TGGTTATCACTTAGTGGGTTGAAT 57.865 37.500 12.79 0.06 33.87 2.57
4142 7079 4.098807 GGTGCACCCCGTAATTCATAATTT 59.901 41.667 26.31 0.00 32.38 1.82
4192 7129 4.082787 CCCAATAGTGAAACGTTGAAGCAT 60.083 41.667 0.00 0.00 45.86 3.79
4231 7168 6.518493 CCCGGAGTAATAGTACATAAAGCAA 58.482 40.000 0.73 0.00 32.12 3.91
4262 7199 5.463392 CGTTTCATTCACTCACTTTCTCTCA 59.537 40.000 0.00 0.00 0.00 3.27
4290 7227 4.707448 GTGTCTCTTATCCTCTTCTCACCA 59.293 45.833 0.00 0.00 0.00 4.17
4324 7264 3.797256 AGCAATCATAACTTACGCTCGAC 59.203 43.478 0.00 0.00 0.00 4.20
4335 7275 2.288013 CGCTCGACGTATGCACAAT 58.712 52.632 0.00 0.00 36.87 2.71
4347 7287 0.251634 TGCACAATCGTAGCCATGGA 59.748 50.000 18.40 0.00 0.00 3.41
4412 7354 8.858003 TTTAGCATGACAAATCAAACGTTTTA 57.142 26.923 11.66 3.65 38.69 1.52
4425 7367 8.649973 ATCAAACGTTTTAATGGCAACTTTAA 57.350 26.923 11.66 0.00 42.47 1.52
4441 7383 2.938428 TTAATTGGCCTGGGGATGTT 57.062 45.000 3.32 0.00 0.00 2.71
4521 7464 4.870123 TTGACATGCTTGCCAACTAAAT 57.130 36.364 0.00 0.00 0.00 1.40
4533 7476 4.155826 TGCCAACTAAATTTGTCATCCTCG 59.844 41.667 0.00 0.00 0.00 4.63
4540 7483 5.638596 AAATTTGTCATCCTCGGTAAACC 57.361 39.130 0.00 0.00 0.00 3.27
4611 7555 6.136071 CACCAGATTTGTAACGAAGTGAAAG 58.864 40.000 0.00 0.00 45.00 2.62
4614 7558 6.851330 CCAGATTTGTAACGAAGTGAAAGAAC 59.149 38.462 0.00 0.00 45.00 3.01
4619 7563 5.347342 TGTAACGAAGTGAAAGAACGGTAA 58.653 37.500 0.00 0.00 45.00 2.85
4625 7569 5.061808 CGAAGTGAAAGAACGGTAACTATGG 59.938 44.000 0.00 0.00 0.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.235926 GTCTTCTTTGCCGTCACTGC 59.764 55.000 0.00 0.00 0.00 4.40
1 2 1.528586 CTGTCTTCTTTGCCGTCACTG 59.471 52.381 0.00 0.00 0.00 3.66
2 3 1.139058 ACTGTCTTCTTTGCCGTCACT 59.861 47.619 0.00 0.00 0.00 3.41
3 4 1.583054 ACTGTCTTCTTTGCCGTCAC 58.417 50.000 0.00 0.00 0.00 3.67
4 5 2.325583 AACTGTCTTCTTTGCCGTCA 57.674 45.000 0.00 0.00 0.00 4.35
5 6 2.854805 GCAAACTGTCTTCTTTGCCGTC 60.855 50.000 4.14 0.00 44.30 4.79
6 7 1.065551 GCAAACTGTCTTCTTTGCCGT 59.934 47.619 4.14 0.00 44.30 5.68
7 8 1.758783 GCAAACTGTCTTCTTTGCCG 58.241 50.000 4.14 0.00 44.30 5.69
10 11 2.354510 TCACGGCAAACTGTCTTCTTTG 59.645 45.455 0.00 0.00 31.05 2.77
11 12 2.639065 TCACGGCAAACTGTCTTCTTT 58.361 42.857 0.00 0.00 31.05 2.52
12 13 2.325583 TCACGGCAAACTGTCTTCTT 57.674 45.000 0.00 0.00 31.05 2.52
13 14 2.213499 CTTCACGGCAAACTGTCTTCT 58.787 47.619 0.00 0.00 31.05 2.85
14 15 1.334149 GCTTCACGGCAAACTGTCTTC 60.334 52.381 0.00 0.00 31.05 2.87
15 16 0.663153 GCTTCACGGCAAACTGTCTT 59.337 50.000 0.00 0.00 31.05 3.01
16 17 0.179045 AGCTTCACGGCAAACTGTCT 60.179 50.000 0.00 0.00 31.05 3.41
17 18 0.040958 CAGCTTCACGGCAAACTGTC 60.041 55.000 0.00 0.00 31.05 3.51
18 19 1.447317 CCAGCTTCACGGCAAACTGT 61.447 55.000 0.00 0.00 35.02 3.55
19 20 1.283793 CCAGCTTCACGGCAAACTG 59.716 57.895 0.00 0.00 34.17 3.16
20 21 1.898574 CCCAGCTTCACGGCAAACT 60.899 57.895 0.00 0.00 34.17 2.66
21 22 1.734388 AACCCAGCTTCACGGCAAAC 61.734 55.000 0.00 0.00 34.17 2.93
22 23 1.040339 AAACCCAGCTTCACGGCAAA 61.040 50.000 0.00 0.00 34.17 3.68
23 24 1.454847 AAACCCAGCTTCACGGCAA 60.455 52.632 0.00 0.00 34.17 4.52
24 25 2.192861 CAAACCCAGCTTCACGGCA 61.193 57.895 0.00 0.00 34.17 5.69
25 26 2.644992 CAAACCCAGCTTCACGGC 59.355 61.111 0.00 0.00 0.00 5.68
26 27 2.644992 GCAAACCCAGCTTCACGG 59.355 61.111 0.00 0.00 0.00 4.94
27 28 2.644992 GGCAAACCCAGCTTCACG 59.355 61.111 0.00 0.00 0.00 4.35
28 29 1.856265 CTCGGCAAACCCAGCTTCAC 61.856 60.000 0.00 0.00 0.00 3.18
29 30 1.600636 CTCGGCAAACCCAGCTTCA 60.601 57.895 0.00 0.00 0.00 3.02
30 31 1.301677 CTCTCGGCAAACCCAGCTTC 61.302 60.000 0.00 0.00 0.00 3.86
31 32 1.302832 CTCTCGGCAAACCCAGCTT 60.303 57.895 0.00 0.00 0.00 3.74
32 33 2.348998 CTCTCGGCAAACCCAGCT 59.651 61.111 0.00 0.00 0.00 4.24
33 34 2.032681 ACTCTCGGCAAACCCAGC 59.967 61.111 0.00 0.00 0.00 4.85
34 35 0.951040 GTCACTCTCGGCAAACCCAG 60.951 60.000 0.00 0.00 0.00 4.45
35 36 1.070786 GTCACTCTCGGCAAACCCA 59.929 57.895 0.00 0.00 0.00 4.51
36 37 1.070786 TGTCACTCTCGGCAAACCC 59.929 57.895 0.00 0.00 0.00 4.11
37 38 0.249911 AGTGTCACTCTCGGCAAACC 60.250 55.000 0.00 0.00 0.00 3.27
38 39 1.140816 GAGTGTCACTCTCGGCAAAC 58.859 55.000 23.25 0.00 41.88 2.93
39 40 3.588277 GAGTGTCACTCTCGGCAAA 57.412 52.632 23.25 0.00 41.88 3.68
45 46 2.086054 ATTTGCCGAGTGTCACTCTC 57.914 50.000 26.46 18.99 42.92 3.20
46 47 2.550830 AATTTGCCGAGTGTCACTCT 57.449 45.000 26.46 7.74 42.92 3.24
47 48 3.626028 AAAATTTGCCGAGTGTCACTC 57.374 42.857 21.13 21.13 41.71 3.51
48 49 3.632145 AGAAAAATTTGCCGAGTGTCACT 59.368 39.130 4.81 4.81 0.00 3.41
49 50 3.964909 AGAAAAATTTGCCGAGTGTCAC 58.035 40.909 0.00 0.00 0.00 3.67
50 51 4.647424 AAGAAAAATTTGCCGAGTGTCA 57.353 36.364 0.00 0.00 0.00 3.58
51 52 5.315118 CAAAGAAAAATTTGCCGAGTGTC 57.685 39.130 0.00 0.00 33.71 3.67
60 61 4.209080 GGACACTCGGCAAAGAAAAATTTG 59.791 41.667 0.00 0.00 42.00 2.32
61 62 4.368315 GGACACTCGGCAAAGAAAAATTT 58.632 39.130 0.00 0.00 0.00 1.82
62 63 3.550030 CGGACACTCGGCAAAGAAAAATT 60.550 43.478 0.00 0.00 0.00 1.82
63 64 2.031157 CGGACACTCGGCAAAGAAAAAT 60.031 45.455 0.00 0.00 0.00 1.82
64 65 1.332375 CGGACACTCGGCAAAGAAAAA 59.668 47.619 0.00 0.00 0.00 1.94
65 66 0.941542 CGGACACTCGGCAAAGAAAA 59.058 50.000 0.00 0.00 0.00 2.29
66 67 0.179067 ACGGACACTCGGCAAAGAAA 60.179 50.000 0.00 0.00 0.00 2.52
67 68 0.878523 CACGGACACTCGGCAAAGAA 60.879 55.000 0.00 0.00 0.00 2.52
68 69 1.300620 CACGGACACTCGGCAAAGA 60.301 57.895 0.00 0.00 0.00 2.52
69 70 1.157870 AACACGGACACTCGGCAAAG 61.158 55.000 0.00 0.00 0.00 2.77
70 71 0.745128 AAACACGGACACTCGGCAAA 60.745 50.000 0.00 0.00 0.00 3.68
71 72 0.745128 AAAACACGGACACTCGGCAA 60.745 50.000 0.00 0.00 0.00 4.52
72 73 1.153329 AAAACACGGACACTCGGCA 60.153 52.632 0.00 0.00 0.00 5.69
73 74 1.278637 CAAAACACGGACACTCGGC 59.721 57.895 0.00 0.00 0.00 5.54
74 75 1.938861 CCAAAACACGGACACTCGG 59.061 57.895 0.00 0.00 0.00 4.63
75 76 1.278637 GCCAAAACACGGACACTCG 59.721 57.895 0.00 0.00 0.00 4.18
76 77 0.028902 GTGCCAAAACACGGACACTC 59.971 55.000 0.00 0.00 31.74 3.51
77 78 0.393808 AGTGCCAAAACACGGACACT 60.394 50.000 0.00 0.00 45.45 3.55
78 79 0.454196 AAGTGCCAAAACACGGACAC 59.546 50.000 0.00 0.00 45.45 3.67
79 80 0.453793 CAAGTGCCAAAACACGGACA 59.546 50.000 0.00 0.00 45.45 4.02
80 81 0.736053 TCAAGTGCCAAAACACGGAC 59.264 50.000 0.00 0.00 45.45 4.79
81 82 1.336440 CATCAAGTGCCAAAACACGGA 59.664 47.619 0.00 0.00 45.45 4.69
82 83 1.336440 TCATCAAGTGCCAAAACACGG 59.664 47.619 0.00 0.00 45.45 4.94
83 84 2.772568 TCATCAAGTGCCAAAACACG 57.227 45.000 0.00 0.00 45.45 4.49
84 85 4.293415 CTCTTCATCAAGTGCCAAAACAC 58.707 43.478 0.00 0.00 41.02 3.32
85 86 3.243501 GCTCTTCATCAAGTGCCAAAACA 60.244 43.478 0.00 0.00 41.42 2.83
86 87 3.243501 TGCTCTTCATCAAGTGCCAAAAC 60.244 43.478 0.78 0.00 44.99 2.43
87 88 2.957680 TGCTCTTCATCAAGTGCCAAAA 59.042 40.909 0.78 0.00 44.99 2.44
88 89 2.585330 TGCTCTTCATCAAGTGCCAAA 58.415 42.857 0.78 0.00 44.99 3.28
89 90 2.275134 TGCTCTTCATCAAGTGCCAA 57.725 45.000 0.78 0.00 44.99 4.52
90 91 2.089201 CATGCTCTTCATCAAGTGCCA 58.911 47.619 0.78 0.00 44.99 4.92
91 92 2.097142 GTCATGCTCTTCATCAAGTGCC 59.903 50.000 0.78 0.00 44.99 5.01
92 93 2.745821 TGTCATGCTCTTCATCAAGTGC 59.254 45.455 0.00 0.00 45.55 4.40
93 94 3.126514 GGTGTCATGCTCTTCATCAAGTG 59.873 47.826 0.00 0.00 31.79 3.16
94 95 3.341823 GGTGTCATGCTCTTCATCAAGT 58.658 45.455 0.00 0.00 31.79 3.16
95 96 2.681848 GGGTGTCATGCTCTTCATCAAG 59.318 50.000 0.00 0.00 31.79 3.02
96 97 2.715046 GGGTGTCATGCTCTTCATCAA 58.285 47.619 0.00 0.00 31.79 2.57
97 98 1.405933 CGGGTGTCATGCTCTTCATCA 60.406 52.381 0.00 0.00 31.79 3.07
98 99 1.293924 CGGGTGTCATGCTCTTCATC 58.706 55.000 0.00 0.00 31.79 2.92
99 100 0.107508 CCGGGTGTCATGCTCTTCAT 60.108 55.000 0.00 0.00 35.31 2.57
100 101 1.296392 CCGGGTGTCATGCTCTTCA 59.704 57.895 0.00 0.00 0.00 3.02
101 102 1.021390 CACCGGGTGTCATGCTCTTC 61.021 60.000 19.15 0.00 0.00 2.87
102 103 1.003355 CACCGGGTGTCATGCTCTT 60.003 57.895 19.15 0.00 0.00 2.85
103 104 0.902984 TACACCGGGTGTCATGCTCT 60.903 55.000 34.48 11.73 43.92 4.09
104 105 0.739813 GTACACCGGGTGTCATGCTC 60.740 60.000 34.48 15.54 43.92 4.26
105 106 1.295423 GTACACCGGGTGTCATGCT 59.705 57.895 34.48 13.22 43.92 3.79
106 107 2.098233 CGTACACCGGGTGTCATGC 61.098 63.158 34.48 21.02 43.92 4.06
107 108 1.011968 CACGTACACCGGGTGTCATG 61.012 60.000 34.48 25.07 43.92 3.07
108 109 1.180456 TCACGTACACCGGGTGTCAT 61.180 55.000 34.48 18.85 43.92 3.06
109 110 1.390383 TTCACGTACACCGGGTGTCA 61.390 55.000 34.48 18.54 43.92 3.58
110 111 0.249405 TTTCACGTACACCGGGTGTC 60.249 55.000 34.48 23.40 43.92 3.67
112 113 1.515081 ATTTTCACGTACACCGGGTG 58.485 50.000 25.21 25.21 41.99 4.61
113 114 2.259266 AATTTTCACGTACACCGGGT 57.741 45.000 6.32 3.22 41.99 5.28
114 115 3.629438 AAAATTTTCACGTACACCGGG 57.371 42.857 6.32 0.00 42.98 5.73
115 116 5.347012 ACTAAAATTTTCACGTACACCGG 57.653 39.130 6.72 0.00 42.24 5.28
116 117 7.005380 CACTACTAAAATTTTCACGTACACCG 58.995 38.462 6.72 0.17 44.03 4.94
117 118 6.793680 GCACTACTAAAATTTTCACGTACACC 59.206 38.462 6.72 0.00 0.00 4.16
118 119 6.793680 GGCACTACTAAAATTTTCACGTACAC 59.206 38.462 6.72 0.00 0.00 2.90
119 120 6.707161 AGGCACTACTAAAATTTTCACGTACA 59.293 34.615 6.72 0.00 36.02 2.90
120 121 7.013529 CAGGCACTACTAAAATTTTCACGTAC 58.986 38.462 6.72 0.00 36.02 3.67
121 122 6.148150 CCAGGCACTACTAAAATTTTCACGTA 59.852 38.462 6.72 7.01 36.02 3.57
122 123 5.048991 CCAGGCACTACTAAAATTTTCACGT 60.049 40.000 6.72 6.23 36.02 4.49
123 124 5.180492 TCCAGGCACTACTAAAATTTTCACG 59.820 40.000 6.72 0.25 36.02 4.35
124 125 6.569179 TCCAGGCACTACTAAAATTTTCAC 57.431 37.500 6.72 0.00 36.02 3.18
125 126 7.361713 CGAATCCAGGCACTACTAAAATTTTCA 60.362 37.037 6.72 0.00 36.02 2.69
126 127 6.967199 CGAATCCAGGCACTACTAAAATTTTC 59.033 38.462 6.72 0.00 36.02 2.29
127 128 6.657541 TCGAATCCAGGCACTACTAAAATTTT 59.342 34.615 8.75 8.75 36.02 1.82
128 129 6.177610 TCGAATCCAGGCACTACTAAAATTT 58.822 36.000 0.00 0.00 36.02 1.82
129 130 5.741011 TCGAATCCAGGCACTACTAAAATT 58.259 37.500 0.00 0.00 36.02 1.82
130 131 5.353394 TCGAATCCAGGCACTACTAAAAT 57.647 39.130 0.00 0.00 36.02 1.82
131 132 4.382685 CCTCGAATCCAGGCACTACTAAAA 60.383 45.833 0.00 0.00 36.02 1.52
132 133 3.132289 CCTCGAATCCAGGCACTACTAAA 59.868 47.826 0.00 0.00 36.02 1.85
133 134 2.693591 CCTCGAATCCAGGCACTACTAA 59.306 50.000 0.00 0.00 36.02 2.24
134 135 2.307768 CCTCGAATCCAGGCACTACTA 58.692 52.381 0.00 0.00 36.02 1.82
135 136 1.115467 CCTCGAATCCAGGCACTACT 58.885 55.000 0.00 0.00 36.02 2.57
136 137 3.669354 CCTCGAATCCAGGCACTAC 57.331 57.895 0.00 0.00 36.02 2.73
142 143 1.144936 GTGAGGCCTCGAATCCAGG 59.855 63.158 27.43 0.00 0.00 4.45
143 144 0.250234 TTGTGAGGCCTCGAATCCAG 59.750 55.000 27.43 0.00 0.00 3.86
144 145 0.911769 ATTGTGAGGCCTCGAATCCA 59.088 50.000 27.43 15.18 0.00 3.41
145 146 1.672881 CAATTGTGAGGCCTCGAATCC 59.327 52.381 27.43 12.84 0.00 3.01
146 147 2.359900 ACAATTGTGAGGCCTCGAATC 58.640 47.619 27.43 17.15 0.00 2.52
147 148 2.496899 ACAATTGTGAGGCCTCGAAT 57.503 45.000 27.43 22.95 0.00 3.34
148 149 2.151202 GAACAATTGTGAGGCCTCGAA 58.849 47.619 27.43 21.79 0.00 3.71
149 150 1.347707 AGAACAATTGTGAGGCCTCGA 59.652 47.619 27.43 16.24 0.00 4.04
150 151 1.813513 AGAACAATTGTGAGGCCTCG 58.186 50.000 27.43 14.43 0.00 4.63
151 152 3.149196 TGAAGAACAATTGTGAGGCCTC 58.851 45.455 26.78 26.78 0.00 4.70
152 153 3.152341 CTGAAGAACAATTGTGAGGCCT 58.848 45.455 12.82 3.86 0.00 5.19
204 205 5.060506 TCCAATACACAACTCGACAAACAT 58.939 37.500 0.00 0.00 0.00 2.71
206 207 5.607119 ATCCAATACACAACTCGACAAAC 57.393 39.130 0.00 0.00 0.00 2.93
231 232 6.487299 AATTTGGCCAGGTTTTTACACTTA 57.513 33.333 5.11 0.00 0.00 2.24
248 249 7.727331 TCAAAGTTGGAATGCTAAAATTTGG 57.273 32.000 10.60 0.00 30.81 3.28
249 250 8.991026 TGATCAAAGTTGGAATGCTAAAATTTG 58.009 29.630 0.00 6.36 30.95 2.32
287 288 9.760660 GAGAAACATACACACATACTGATTTTC 57.239 33.333 0.00 0.00 0.00 2.29
293 294 7.889589 TCAAGAGAAACATACACACATACTG 57.110 36.000 0.00 0.00 0.00 2.74
301 302 6.803807 GCTGGAATTTCAAGAGAAACATACAC 59.196 38.462 4.91 0.00 45.79 2.90
322 323 1.745087 ACAAGGAAATGTATGCGCTGG 59.255 47.619 9.73 0.00 0.00 4.85
367 368 7.125659 CCATCCCTTTTTCCAACCTTGTATATT 59.874 37.037 0.00 0.00 0.00 1.28
386 387 1.078426 CTCGTTTTCGCCCATCCCT 60.078 57.895 0.00 0.00 43.73 4.20
388 389 2.761195 GCCTCGTTTTCGCCCATCC 61.761 63.158 0.00 0.00 43.73 3.51
390 391 3.124921 CGCCTCGTTTTCGCCCAT 61.125 61.111 0.00 0.00 43.73 4.00
395 396 1.203313 GTCAACCGCCTCGTTTTCG 59.797 57.895 0.00 0.00 45.64 3.46
400 401 2.342648 GAAGGTCAACCGCCTCGT 59.657 61.111 0.00 0.00 42.08 4.18
406 407 1.810030 GCTAGGCGAAGGTCAACCG 60.810 63.158 0.00 0.00 42.08 4.44
424 425 1.709147 GCTGATGCACCACCTAAGCG 61.709 60.000 0.00 0.00 39.41 4.68
427 428 1.745115 GCGCTGATGCACCACCTAA 60.745 57.895 0.00 0.00 39.64 2.69
445 446 5.066505 GTCAAAATTGTACATCCAGCTAGGG 59.933 44.000 0.00 0.00 38.24 3.53
446 447 5.882557 AGTCAAAATTGTACATCCAGCTAGG 59.117 40.000 0.00 0.00 39.47 3.02
450 451 7.066284 ACTGATAGTCAAAATTGTACATCCAGC 59.934 37.037 0.00 0.00 0.00 4.85
452 453 8.862325 AACTGATAGTCAAAATTGTACATCCA 57.138 30.769 0.00 0.00 0.00 3.41
539 546 4.331968 CCACCTTCCAGTTGCAATAACTA 58.668 43.478 0.59 0.00 0.00 2.24
542 549 1.892474 GCCACCTTCCAGTTGCAATAA 59.108 47.619 0.59 0.00 0.00 1.40
565 572 1.921243 GTTGCACCAACAGACCAAAC 58.079 50.000 3.40 0.00 43.09 2.93
643 650 2.913777 CGACCTCGTGTAAGACATGA 57.086 50.000 0.00 1.80 41.45 3.07
660 667 2.422597 CACTAGGCAATGACCAAACGA 58.577 47.619 0.00 0.00 0.00 3.85
688 695 2.815308 CCGGAGGCGCTTAGTCAT 59.185 61.111 7.64 0.00 46.14 3.06
722 729 9.634021 TCTGAATTACGGCTATATATCATCTCT 57.366 33.333 0.00 0.00 0.00 3.10
797 805 1.347817 GCTGTGCTCGTAGCTGTGTC 61.348 60.000 0.00 0.00 42.97 3.67
1066 1078 2.351888 GCCGTTGTTGTGTCGTGC 60.352 61.111 0.00 0.00 0.00 5.34
1067 1079 2.053465 CGCCGTTGTTGTGTCGTG 60.053 61.111 0.00 0.00 0.00 4.35
1070 1082 2.244651 AGCTCGCCGTTGTTGTGTC 61.245 57.895 0.00 0.00 0.00 3.67
1071 1083 2.203015 AGCTCGCCGTTGTTGTGT 60.203 55.556 0.00 0.00 0.00 3.72
1072 1084 1.568612 ATCAGCTCGCCGTTGTTGTG 61.569 55.000 0.00 0.00 0.00 3.33
1073 1085 1.291877 GATCAGCTCGCCGTTGTTGT 61.292 55.000 0.00 0.00 0.00 3.32
1074 1086 1.421485 GATCAGCTCGCCGTTGTTG 59.579 57.895 0.00 0.00 0.00 3.33
1075 1087 1.741770 GGATCAGCTCGCCGTTGTT 60.742 57.895 0.00 0.00 0.00 2.83
1076 1088 2.125512 GGATCAGCTCGCCGTTGT 60.126 61.111 0.00 0.00 0.00 3.32
1077 1089 2.125552 TGGATCAGCTCGCCGTTG 60.126 61.111 0.00 0.00 0.00 4.10
1078 1090 2.185350 CTGGATCAGCTCGCCGTT 59.815 61.111 0.00 0.00 0.00 4.44
1113 1125 1.804396 CTGGACAACGCCATTTGCCA 61.804 55.000 0.00 0.00 37.30 4.92
1292 1304 1.595993 CGAAGGAGGCGAGGTTCAGA 61.596 60.000 0.00 0.00 0.00 3.27
1435 1447 7.147549 ACGAAATGATAGATACCTTTCCCTCAA 60.148 37.037 0.00 0.00 0.00 3.02
1437 1449 6.760291 ACGAAATGATAGATACCTTTCCCTC 58.240 40.000 0.00 0.00 0.00 4.30
1438 1450 6.749036 ACGAAATGATAGATACCTTTCCCT 57.251 37.500 0.00 0.00 0.00 4.20
1439 1451 6.145696 CGAACGAAATGATAGATACCTTTCCC 59.854 42.308 0.00 0.00 0.00 3.97
1440 1452 6.700520 ACGAACGAAATGATAGATACCTTTCC 59.299 38.462 0.14 0.00 0.00 3.13
1441 1453 7.357368 CGACGAACGAAATGATAGATACCTTTC 60.357 40.741 0.14 0.00 45.77 2.62
1444 1456 5.450171 CGACGAACGAAATGATAGATACCT 58.550 41.667 0.14 0.00 45.77 3.08
1460 1472 2.351418 TGCATCAAATGGATCGACGAAC 59.649 45.455 0.00 0.00 32.57 3.95
1462 1474 2.204237 CTGCATCAAATGGATCGACGA 58.796 47.619 0.00 0.00 32.57 4.20
1464 1476 4.361451 AAACTGCATCAAATGGATCGAC 57.639 40.909 0.00 0.00 32.57 4.20
1466 1478 5.227805 CGTAAAAACTGCATCAAATGGATCG 59.772 40.000 0.00 0.00 32.57 3.69
1468 1480 4.864247 GCGTAAAAACTGCATCAAATGGAT 59.136 37.500 0.00 0.00 36.39 3.41
1469 1481 4.233789 GCGTAAAAACTGCATCAAATGGA 58.766 39.130 0.00 0.00 0.00 3.41
1470 1482 3.059306 CGCGTAAAAACTGCATCAAATGG 59.941 43.478 0.00 0.00 0.00 3.16
1471 1483 3.911365 TCGCGTAAAAACTGCATCAAATG 59.089 39.130 5.77 0.00 0.00 2.32
1472 1484 3.911964 GTCGCGTAAAAACTGCATCAAAT 59.088 39.130 5.77 0.00 0.00 2.32
1516 1790 5.872070 GGTTCTGTTTCAAATCCACAAACAA 59.128 36.000 0.00 0.00 39.04 2.83
1765 4455 1.734465 GGCATGCACTGTCTCAGTAAC 59.266 52.381 21.36 0.00 43.43 2.50
2165 4966 1.014044 CGTGTCCCACCTGATCAACG 61.014 60.000 0.00 0.00 0.00 4.10
2400 5228 0.180406 AGTTGAGCGTGAAGGTTGGT 59.820 50.000 0.00 0.00 0.00 3.67
2462 5290 8.664211 ACTTCAAAACTTAGTGGAAGAACTAG 57.336 34.615 20.66 0.00 38.59 2.57
2469 5297 8.795842 TCAACTTACTTCAAAACTTAGTGGAA 57.204 30.769 0.00 0.00 0.00 3.53
2470 5298 8.836413 CATCAACTTACTTCAAAACTTAGTGGA 58.164 33.333 0.00 0.00 0.00 4.02
2471 5299 8.621286 ACATCAACTTACTTCAAAACTTAGTGG 58.379 33.333 0.00 0.00 0.00 4.00
2477 5305 8.281212 AGAACACATCAACTTACTTCAAAACT 57.719 30.769 0.00 0.00 0.00 2.66
2499 5356 0.694771 AGGGAGCAGCACATGAAGAA 59.305 50.000 0.00 0.00 0.00 2.52
2607 5464 6.928492 CCCCAACAAAAACGTACTACTACTAA 59.072 38.462 0.00 0.00 0.00 2.24
2609 5466 5.163311 ACCCCAACAAAAACGTACTACTACT 60.163 40.000 0.00 0.00 0.00 2.57
2617 5474 8.419442 ACATAATAAAACCCCAACAAAAACGTA 58.581 29.630 0.00 0.00 0.00 3.57
2726 5652 4.795278 GTGTTTCTTTGCTTTCAGACACAG 59.205 41.667 0.00 0.00 36.91 3.66
2735 5661 2.479560 GCCACTCGTGTTTCTTTGCTTT 60.480 45.455 0.00 0.00 0.00 3.51
2750 5676 0.682209 ATGAAGTGCATGGGCCACTC 60.682 55.000 9.28 3.73 40.13 3.51
2878 5806 4.634184 TCATCGACTGCTACCTAAAGTC 57.366 45.455 0.00 0.00 37.55 3.01
2940 5868 1.430632 CTTGTAGCCCTGCATTGCG 59.569 57.895 3.84 0.00 0.00 4.85
3066 5994 1.893801 GACGAGTCCTTGAGGGAGAAA 59.106 52.381 0.00 0.00 46.10 2.52
3126 6054 0.958382 CCGGAACAATCCAGCCGAAA 60.958 55.000 0.00 0.00 46.97 3.46
3247 6175 2.362736 CATCTCCACCATGACCTTGTG 58.637 52.381 0.00 0.00 0.00 3.33
3249 6177 1.561076 TCCATCTCCACCATGACCTTG 59.439 52.381 0.00 0.00 0.00 3.61
3436 6366 1.250328 TGCCGAAGAAGAACTCGGTA 58.750 50.000 11.73 4.86 46.35 4.02
3437 6367 0.608640 ATGCCGAAGAAGAACTCGGT 59.391 50.000 11.73 0.00 46.35 4.69
3523 6453 5.985781 ACATAACTAAGCACACAAAACGAG 58.014 37.500 0.00 0.00 0.00 4.18
3558 6488 4.792804 GTCAGCCCAGGCCAGCTC 62.793 72.222 5.01 0.00 43.17 4.09
3648 6578 0.456824 TCGCAGAGCACTTAGAAGCG 60.457 55.000 6.49 6.49 44.45 4.68
3722 6652 0.606401 AACAACATGAGGCGAGGTGG 60.606 55.000 0.00 0.00 0.00 4.61
3741 6671 3.089284 TGAACCTCTCAGCGTCAAGATA 58.911 45.455 0.00 0.00 0.00 1.98
3829 6759 2.368875 ACCACAAGTCAGGGAAGTACAG 59.631 50.000 0.00 0.00 0.00 2.74
3862 6792 0.635009 ATGGGACGAAGGGAGTAGGA 59.365 55.000 0.00 0.00 0.00 2.94
3863 6793 2.376695 TATGGGACGAAGGGAGTAGG 57.623 55.000 0.00 0.00 0.00 3.18
3873 6803 5.717078 AACGCTCTTATATTATGGGACGA 57.283 39.130 0.00 0.00 0.00 4.20
3874 6804 6.780706 AAAACGCTCTTATATTATGGGACG 57.219 37.500 0.00 0.00 0.00 4.79
3905 6835 6.716898 ATAAGAGCGTTTTTACACTACACC 57.283 37.500 0.00 0.00 0.00 4.16
3938 6868 6.362248 TCTTGTGCTTATATTTTACTCCCCC 58.638 40.000 0.00 0.00 0.00 5.40
4010 6943 0.805711 GCAACAAAGCGTGCCAAACT 60.806 50.000 0.00 0.00 0.00 2.66
4077 7014 5.533528 ACCCACTAAGTGATAACCAAACAAC 59.466 40.000 0.00 0.00 35.23 3.32
4102 7039 7.286775 GGGGTGCACCTAGAATAATAAAATTCA 59.713 37.037 33.91 0.00 37.58 2.57
4106 7043 5.127491 CGGGGTGCACCTAGAATAATAAAA 58.873 41.667 33.91 0.00 40.03 1.52
4231 7168 6.391227 AGTGAGTGAATGAAACGGATTTTT 57.609 33.333 0.00 0.00 0.00 1.94
4262 7199 6.894654 TGAGAAGAGGATAAGAGACACAAGAT 59.105 38.462 0.00 0.00 0.00 2.40
4290 7227 8.848474 AAGTTATGATTGCTACTACTTTGTGT 57.152 30.769 0.00 0.00 0.00 3.72
4324 7264 1.566404 TGGCTACGATTGTGCATACG 58.434 50.000 0.00 0.00 0.00 3.06
4325 7265 2.224079 CCATGGCTACGATTGTGCATAC 59.776 50.000 0.00 0.00 0.00 2.39
4335 7275 1.220749 GGTGCTTCCATGGCTACGA 59.779 57.895 6.96 0.00 35.97 3.43
4412 7354 3.307621 CCAGGCCAATTAAAGTTGCCATT 60.308 43.478 5.01 0.00 31.77 3.16
4425 7367 2.938428 TTTAACATCCCCAGGCCAAT 57.062 45.000 5.01 0.00 0.00 3.16
4431 7373 6.540914 TCGTAAGCTAAATTTAACATCCCCAG 59.459 38.462 0.00 0.00 37.18 4.45
4485 7428 6.182627 AGCATGTCAAATCCATCTCAGTTTA 58.817 36.000 0.00 0.00 0.00 2.01
4494 7437 2.181125 TGGCAAGCATGTCAAATCCAT 58.819 42.857 0.00 0.00 38.47 3.41
4521 7464 2.372504 TGGGTTTACCGAGGATGACAAA 59.627 45.455 0.00 0.00 44.64 2.83
4573 7516 3.687698 AATCTGGTGTCGGATTTTTACCG 59.312 43.478 0.00 0.00 44.24 4.02
4611 7555 1.202615 GGGCTCCCATAGTTACCGTTC 60.203 57.143 0.00 0.00 35.81 3.95
4614 7558 0.680061 GAGGGCTCCCATAGTTACCG 59.320 60.000 7.82 0.00 38.92 4.02
4619 7563 1.291033 TGTACAGAGGGCTCCCATAGT 59.709 52.381 7.82 4.77 38.92 2.12
4625 7569 1.271379 TGCTTTTGTACAGAGGGCTCC 60.271 52.381 12.21 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.