Multiple sequence alignment - TraesCS2D01G312900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G312900 chr2D 100.000 3136 0 0 1 3136 402553232 402550097 0.000000e+00 5792.0
1 TraesCS2D01G312900 chr2D 98.246 114 2 0 1 114 472444578 472444691 1.910000e-47 200.0
2 TraesCS2D01G312900 chr2D 82.857 105 12 3 2912 3010 2476585 2476689 4.310000e-14 89.8
3 TraesCS2D01G312900 chr2A 91.990 2734 91 47 482 3136 539652733 539650049 0.000000e+00 3718.0
4 TraesCS2D01G312900 chr2A 81.694 366 38 21 129 468 171930556 171930918 8.570000e-71 278.0
5 TraesCS2D01G312900 chr2B 93.600 1953 68 21 479 2406 476042956 476044876 0.000000e+00 2861.0
6 TraesCS2D01G312900 chr2B 91.437 689 40 17 2453 3136 476044877 476045551 0.000000e+00 928.0
7 TraesCS2D01G312900 chr2B 94.488 127 6 1 1 126 763964804 763964930 8.870000e-46 195.0
8 TraesCS2D01G312900 chr7A 83.287 359 33 15 140 480 4767707 4768056 3.930000e-79 305.0
9 TraesCS2D01G312900 chr7A 80.412 291 39 15 205 479 233338798 233338510 4.100000e-49 206.0
10 TraesCS2D01G312900 chr4B 82.173 359 37 24 140 482 103548198 103547851 1.840000e-72 283.0
11 TraesCS2D01G312900 chr5A 81.440 361 39 14 140 479 436321629 436321276 1.430000e-68 270.0
12 TraesCS2D01G312900 chr5A 79.880 333 42 21 168 479 626445843 626446171 1.460000e-53 220.0
13 TraesCS2D01G312900 chr5A 79.331 329 47 18 168 479 627663072 627663396 8.810000e-51 211.0
14 TraesCS2D01G312900 chr5A 83.178 107 10 5 2903 3003 35989192 35989088 1.200000e-14 91.6
15 TraesCS2D01G312900 chr6A 81.389 360 40 13 140 479 608507268 608506916 5.160000e-68 268.0
16 TraesCS2D01G312900 chr6A 83.673 98 14 1 2906 3003 511034311 511034406 1.200000e-14 91.6
17 TraesCS2D01G312900 chr7D 99.130 115 1 0 1 115 320285908 320286022 1.140000e-49 207.0
18 TraesCS2D01G312900 chr1D 88.757 169 17 1 315 481 435256510 435256678 4.100000e-49 206.0
19 TraesCS2D01G312900 chr4D 98.276 116 2 0 1 116 69396154 69396039 1.470000e-48 204.0
20 TraesCS2D01G312900 chr4D 95.833 120 5 0 1 120 406229484 406229365 8.870000e-46 195.0
21 TraesCS2D01G312900 chr4D 96.581 117 4 0 1 117 453054462 453054578 8.870000e-46 195.0
22 TraesCS2D01G312900 chr5D 97.414 116 3 0 1 116 342525799 342525684 6.860000e-47 198.0
23 TraesCS2D01G312900 chr1A 96.667 120 3 1 1 119 291976870 291976989 6.860000e-47 198.0
24 TraesCS2D01G312900 chr1A 85.000 80 6 1 2924 3003 256814055 256813982 3.350000e-10 76.8
25 TraesCS2D01G312900 chr3D 95.833 120 5 0 1 120 535460585 535460704 8.870000e-46 195.0
26 TraesCS2D01G312900 chrUn 85.714 105 9 3 2912 3010 15904017 15903913 4.280000e-19 106.0
27 TraesCS2D01G312900 chr4A 84.466 103 9 4 2912 3008 37060207 37060106 9.260000e-16 95.3
28 TraesCS2D01G312900 chr6D 82.075 106 13 3 2906 3005 158562511 158562616 5.570000e-13 86.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G312900 chr2D 402550097 402553232 3135 True 5792.0 5792 100.0000 1 3136 1 chr2D.!!$R1 3135
1 TraesCS2D01G312900 chr2A 539650049 539652733 2684 True 3718.0 3718 91.9900 482 3136 1 chr2A.!!$R1 2654
2 TraesCS2D01G312900 chr2B 476042956 476045551 2595 False 1894.5 2861 92.5185 479 3136 2 chr2B.!!$F2 2657

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
245 246 0.029300 GTGCATGTGTGTTGCGTTCT 59.971 50.0 0.0 0.0 43.1 3.01 F
316 317 0.039074 AGCTACTGTCTCGCACACAC 60.039 55.0 0.0 0.0 0.0 3.82 F
317 318 0.318699 GCTACTGTCTCGCACACACA 60.319 55.0 0.0 0.0 0.0 3.72 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1411 1444 1.072505 GTGGTGGTAGTGGTGGTGG 59.927 63.158 0.0 0.0 0.0 4.61 R
1686 1736 4.215399 CGTTCATGGCTTCTTCCTTTACAA 59.785 41.667 0.0 0.0 0.0 2.41 R
2242 2341 6.408858 ACAGTGCAGATACAAAGAAATACG 57.591 37.500 0.0 0.0 0.0 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 4.351938 CCTTCGTGTCGGGCGTCA 62.352 66.667 0.00 0.00 0.00 4.35
26 27 3.103911 CTTCGTGTCGGGCGTCAC 61.104 66.667 0.00 0.00 0.00 3.67
27 28 3.834447 CTTCGTGTCGGGCGTCACA 62.834 63.158 0.00 0.00 34.69 3.58
28 29 4.634133 TCGTGTCGGGCGTCACAC 62.634 66.667 0.75 0.75 39.70 3.82
29 30 4.934942 CGTGTCGGGCGTCACACA 62.935 66.667 10.72 0.00 42.67 3.72
30 31 2.586635 GTGTCGGGCGTCACACAA 60.587 61.111 5.81 0.00 42.20 3.33
31 32 2.174969 GTGTCGGGCGTCACACAAA 61.175 57.895 5.81 0.00 42.20 2.83
32 33 1.449778 TGTCGGGCGTCACACAAAA 60.450 52.632 0.00 0.00 0.00 2.44
33 34 1.025113 TGTCGGGCGTCACACAAAAA 61.025 50.000 0.00 0.00 0.00 1.94
34 35 0.316689 GTCGGGCGTCACACAAAAAG 60.317 55.000 0.00 0.00 0.00 2.27
35 36 1.008995 CGGGCGTCACACAAAAAGG 60.009 57.895 0.00 0.00 0.00 3.11
36 37 1.720694 CGGGCGTCACACAAAAAGGT 61.721 55.000 0.00 0.00 0.00 3.50
37 38 0.030235 GGGCGTCACACAAAAAGGTC 59.970 55.000 0.00 0.00 0.00 3.85
38 39 0.736053 GGCGTCACACAAAAAGGTCA 59.264 50.000 0.00 0.00 0.00 4.02
39 40 1.268539 GGCGTCACACAAAAAGGTCAG 60.269 52.381 0.00 0.00 0.00 3.51
40 41 1.859998 GCGTCACACAAAAAGGTCAGC 60.860 52.381 0.00 0.00 0.00 4.26
41 42 1.268539 CGTCACACAAAAAGGTCAGCC 60.269 52.381 0.00 0.00 0.00 4.85
42 43 1.021202 TCACACAAAAAGGTCAGCCG 58.979 50.000 0.00 0.00 40.50 5.52
43 44 0.594796 CACACAAAAAGGTCAGCCGC 60.595 55.000 0.00 0.00 40.50 6.53
44 45 1.370414 CACAAAAAGGTCAGCCGCG 60.370 57.895 0.00 0.00 40.50 6.46
45 46 1.822186 ACAAAAAGGTCAGCCGCGT 60.822 52.632 4.92 0.00 40.50 6.01
46 47 1.370414 CAAAAAGGTCAGCCGCGTG 60.370 57.895 4.92 0.00 40.50 5.34
47 48 1.525077 AAAAAGGTCAGCCGCGTGA 60.525 52.632 4.92 0.00 40.50 4.35
48 49 1.098712 AAAAAGGTCAGCCGCGTGAA 61.099 50.000 4.92 0.00 40.50 3.18
49 50 1.098712 AAAAGGTCAGCCGCGTGAAA 61.099 50.000 4.92 0.00 40.50 2.69
50 51 0.889186 AAAGGTCAGCCGCGTGAAAT 60.889 50.000 4.92 0.00 40.50 2.17
51 52 0.036765 AAGGTCAGCCGCGTGAAATA 60.037 50.000 4.92 0.00 40.50 1.40
52 53 0.460284 AGGTCAGCCGCGTGAAATAG 60.460 55.000 4.92 0.00 40.50 1.73
53 54 0.739813 GGTCAGCCGCGTGAAATAGT 60.740 55.000 4.92 0.00 0.00 2.12
54 55 1.076332 GTCAGCCGCGTGAAATAGTT 58.924 50.000 4.92 0.00 0.00 2.24
55 56 1.463444 GTCAGCCGCGTGAAATAGTTT 59.537 47.619 4.92 0.00 0.00 2.66
56 57 1.730064 TCAGCCGCGTGAAATAGTTTC 59.270 47.619 4.92 0.00 40.08 2.78
57 58 1.463056 CAGCCGCGTGAAATAGTTTCA 59.537 47.619 4.92 1.24 46.68 2.69
65 66 3.134574 TGAAATAGTTTCACGGGCAGT 57.865 42.857 1.24 0.00 44.21 4.40
66 67 3.482436 TGAAATAGTTTCACGGGCAGTT 58.518 40.909 1.24 0.00 44.21 3.16
67 68 3.500680 TGAAATAGTTTCACGGGCAGTTC 59.499 43.478 1.24 0.00 44.21 3.01
68 69 2.851263 ATAGTTTCACGGGCAGTTCA 57.149 45.000 0.00 0.00 0.00 3.18
69 70 2.851263 TAGTTTCACGGGCAGTTCAT 57.149 45.000 0.00 0.00 0.00 2.57
70 71 1.981256 AGTTTCACGGGCAGTTCATT 58.019 45.000 0.00 0.00 0.00 2.57
71 72 1.880027 AGTTTCACGGGCAGTTCATTC 59.120 47.619 0.00 0.00 0.00 2.67
72 73 1.880027 GTTTCACGGGCAGTTCATTCT 59.120 47.619 0.00 0.00 0.00 2.40
73 74 1.522668 TTCACGGGCAGTTCATTCTG 58.477 50.000 0.00 0.00 38.35 3.02
74 75 0.396435 TCACGGGCAGTTCATTCTGT 59.604 50.000 0.00 0.00 37.70 3.41
75 76 0.518636 CACGGGCAGTTCATTCTGTG 59.481 55.000 0.00 0.00 37.70 3.66
76 77 0.396435 ACGGGCAGTTCATTCTGTGA 59.604 50.000 0.00 0.00 37.70 3.58
77 78 1.003580 ACGGGCAGTTCATTCTGTGAT 59.996 47.619 0.00 0.00 36.54 3.06
78 79 2.086869 CGGGCAGTTCATTCTGTGATT 58.913 47.619 0.00 0.00 36.54 2.57
79 80 2.489329 CGGGCAGTTCATTCTGTGATTT 59.511 45.455 0.00 0.00 36.54 2.17
80 81 3.671433 CGGGCAGTTCATTCTGTGATTTG 60.671 47.826 0.00 0.00 36.54 2.32
81 82 3.507233 GGGCAGTTCATTCTGTGATTTGA 59.493 43.478 0.00 0.00 36.54 2.69
82 83 4.159135 GGGCAGTTCATTCTGTGATTTGAT 59.841 41.667 0.00 0.00 36.54 2.57
83 84 5.337009 GGGCAGTTCATTCTGTGATTTGATT 60.337 40.000 0.00 0.00 36.54 2.57
84 85 6.161381 GGCAGTTCATTCTGTGATTTGATTT 58.839 36.000 0.00 0.00 36.54 2.17
85 86 6.309737 GGCAGTTCATTCTGTGATTTGATTTC 59.690 38.462 0.00 0.00 36.54 2.17
86 87 6.864685 GCAGTTCATTCTGTGATTTGATTTCA 59.135 34.615 0.00 0.00 36.54 2.69
87 88 7.544566 GCAGTTCATTCTGTGATTTGATTTCAT 59.455 33.333 0.00 0.00 36.54 2.57
88 89 9.073368 CAGTTCATTCTGTGATTTGATTTCATC 57.927 33.333 0.00 0.00 36.54 2.92
89 90 8.248945 AGTTCATTCTGTGATTTGATTTCATCC 58.751 33.333 0.00 0.00 36.54 3.51
90 91 7.706100 TCATTCTGTGATTTGATTTCATCCA 57.294 32.000 0.00 0.00 0.00 3.41
91 92 8.301252 TCATTCTGTGATTTGATTTCATCCAT 57.699 30.769 0.00 0.00 0.00 3.41
92 93 9.411189 TCATTCTGTGATTTGATTTCATCCATA 57.589 29.630 0.00 0.00 0.00 2.74
93 94 9.678941 CATTCTGTGATTTGATTTCATCCATAG 57.321 33.333 0.00 0.00 0.00 2.23
94 95 9.636789 ATTCTGTGATTTGATTTCATCCATAGA 57.363 29.630 0.00 0.00 0.00 1.98
95 96 9.636789 TTCTGTGATTTGATTTCATCCATAGAT 57.363 29.630 0.00 0.00 0.00 1.98
96 97 9.281371 TCTGTGATTTGATTTCATCCATAGATC 57.719 33.333 0.00 0.00 0.00 2.75
97 98 8.983702 TGTGATTTGATTTCATCCATAGATCA 57.016 30.769 0.00 0.00 0.00 2.92
98 99 9.411189 TGTGATTTGATTTCATCCATAGATCAA 57.589 29.630 0.00 0.00 35.57 2.57
113 114 9.153721 TCCATAGATCAAATTTGTCAATTTTGC 57.846 29.630 20.61 12.15 40.09 3.68
114 115 8.392612 CCATAGATCAAATTTGTCAATTTTGCC 58.607 33.333 20.61 16.08 40.09 4.52
115 116 6.470557 AGATCAAATTTGTCAATTTTGCCG 57.529 33.333 20.61 5.65 40.09 5.69
116 117 4.465040 TCAAATTTGTCAATTTTGCCGC 57.535 36.364 20.61 0.00 40.09 6.53
117 118 3.060003 TCAAATTTGTCAATTTTGCCGCG 60.060 39.130 20.61 0.00 40.09 6.46
118 119 2.147436 ATTTGTCAATTTTGCCGCGT 57.853 40.000 4.92 0.00 0.00 6.01
119 120 1.203928 TTTGTCAATTTTGCCGCGTG 58.796 45.000 4.92 0.00 0.00 5.34
120 121 1.211818 TTGTCAATTTTGCCGCGTGC 61.212 50.000 4.92 9.16 41.77 5.34
121 122 1.371635 GTCAATTTTGCCGCGTGCT 60.372 52.632 18.14 0.00 42.00 4.40
122 123 1.371512 TCAATTTTGCCGCGTGCTG 60.372 52.632 18.14 9.43 42.00 4.41
123 124 2.734346 AATTTTGCCGCGTGCTGC 60.734 55.556 18.14 9.35 42.00 5.25
124 125 3.211564 AATTTTGCCGCGTGCTGCT 62.212 52.632 18.14 1.36 43.27 4.24
125 126 3.902162 ATTTTGCCGCGTGCTGCTG 62.902 57.895 18.14 0.00 43.27 4.41
135 136 3.844741 TGCTGCTGCACATGTTGT 58.155 50.000 14.93 0.00 45.31 3.32
136 137 2.117257 TGCTGCTGCACATGTTGTT 58.883 47.368 14.93 0.00 45.31 2.83
137 138 0.460722 TGCTGCTGCACATGTTGTTT 59.539 45.000 14.93 0.00 45.31 2.83
138 139 0.856641 GCTGCTGCACATGTTGTTTG 59.143 50.000 11.11 0.00 39.41 2.93
139 140 1.493772 CTGCTGCACATGTTGTTTGG 58.506 50.000 0.00 0.00 0.00 3.28
140 141 0.822811 TGCTGCACATGTTGTTTGGT 59.177 45.000 0.00 0.00 0.00 3.67
141 142 1.210870 GCTGCACATGTTGTTTGGTG 58.789 50.000 0.00 0.00 0.00 4.17
142 143 1.471327 GCTGCACATGTTGTTTGGTGT 60.471 47.619 0.00 0.00 33.88 4.16
143 144 2.195096 CTGCACATGTTGTTTGGTGTG 58.805 47.619 0.00 0.00 43.54 3.82
144 145 1.547820 TGCACATGTTGTTTGGTGTGT 59.452 42.857 0.00 0.00 42.85 3.72
145 146 1.925847 GCACATGTTGTTTGGTGTGTG 59.074 47.619 0.00 0.00 42.85 3.82
146 147 1.925847 CACATGTTGTTTGGTGTGTGC 59.074 47.619 0.00 0.00 37.70 4.57
147 148 1.824230 ACATGTTGTTTGGTGTGTGCT 59.176 42.857 0.00 0.00 0.00 4.40
148 149 2.195096 CATGTTGTTTGGTGTGTGCTG 58.805 47.619 0.00 0.00 0.00 4.41
149 150 1.252175 TGTTGTTTGGTGTGTGCTGT 58.748 45.000 0.00 0.00 0.00 4.40
150 151 1.615883 TGTTGTTTGGTGTGTGCTGTT 59.384 42.857 0.00 0.00 0.00 3.16
151 152 1.991965 GTTGTTTGGTGTGTGCTGTTG 59.008 47.619 0.00 0.00 0.00 3.33
152 153 0.108898 TGTTTGGTGTGTGCTGTTGC 60.109 50.000 0.00 0.00 40.20 4.17
153 154 1.138459 TTTGGTGTGTGCTGTTGCG 59.862 52.632 0.00 0.00 43.34 4.85
154 155 1.590610 TTTGGTGTGTGCTGTTGCGT 61.591 50.000 0.00 0.00 43.34 5.24
155 156 2.024588 GGTGTGTGCTGTTGCGTG 59.975 61.111 0.00 0.00 43.34 5.34
156 157 2.468670 GGTGTGTGCTGTTGCGTGA 61.469 57.895 0.00 0.00 43.34 4.35
157 158 1.297598 GTGTGTGCTGTTGCGTGAC 60.298 57.895 0.00 0.00 43.34 3.67
158 159 1.449423 TGTGTGCTGTTGCGTGACT 60.449 52.632 0.00 0.00 43.34 3.41
159 160 1.010797 GTGTGCTGTTGCGTGACTG 60.011 57.895 0.00 0.00 43.34 3.51
160 161 2.051882 GTGCTGTTGCGTGACTGC 60.052 61.111 12.69 12.69 43.34 4.40
161 162 3.639008 TGCTGTTGCGTGACTGCG 61.639 61.111 13.97 0.00 44.46 5.18
162 163 3.640000 GCTGTTGCGTGACTGCGT 61.640 61.111 6.46 0.00 37.81 5.24
163 164 2.246397 CTGTTGCGTGACTGCGTG 59.754 61.111 0.00 0.00 37.81 5.34
164 165 2.510464 TGTTGCGTGACTGCGTGT 60.510 55.556 0.00 0.00 37.81 4.49
165 166 2.035617 CTGTTGCGTGACTGCGTGTT 62.036 55.000 0.00 0.00 37.81 3.32
166 167 1.061887 GTTGCGTGACTGCGTGTTT 59.938 52.632 0.00 0.00 37.81 2.83
167 168 1.061729 TTGCGTGACTGCGTGTTTG 59.938 52.632 0.00 0.00 37.81 2.93
168 169 1.640210 TTGCGTGACTGCGTGTTTGT 61.640 50.000 0.00 0.00 37.81 2.83
169 170 1.651132 GCGTGACTGCGTGTTTGTG 60.651 57.895 0.00 0.00 0.00 3.33
170 171 1.713246 CGTGACTGCGTGTTTGTGT 59.287 52.632 0.00 0.00 0.00 3.72
171 172 0.586256 CGTGACTGCGTGTTTGTGTG 60.586 55.000 0.00 0.00 0.00 3.82
172 173 0.446222 GTGACTGCGTGTTTGTGTGT 59.554 50.000 0.00 0.00 0.00 3.72
173 174 0.445829 TGACTGCGTGTTTGTGTGTG 59.554 50.000 0.00 0.00 0.00 3.82
174 175 0.861450 GACTGCGTGTTTGTGTGTGC 60.861 55.000 0.00 0.00 0.00 4.57
175 176 1.305219 ACTGCGTGTTTGTGTGTGCT 61.305 50.000 0.00 0.00 0.00 4.40
176 177 0.179166 CTGCGTGTTTGTGTGTGCTT 60.179 50.000 0.00 0.00 0.00 3.91
177 178 0.455802 TGCGTGTTTGTGTGTGCTTG 60.456 50.000 0.00 0.00 0.00 4.01
178 179 1.741947 GCGTGTTTGTGTGTGCTTGC 61.742 55.000 0.00 0.00 0.00 4.01
179 180 1.462871 CGTGTTTGTGTGTGCTTGCG 61.463 55.000 0.00 0.00 0.00 4.85
180 181 0.455972 GTGTTTGTGTGTGCTTGCGT 60.456 50.000 0.00 0.00 0.00 5.24
181 182 0.455802 TGTTTGTGTGTGCTTGCGTG 60.456 50.000 0.00 0.00 0.00 5.34
182 183 1.515952 TTTGTGTGTGCTTGCGTGC 60.516 52.632 0.00 0.00 0.00 5.34
183 184 3.731547 TTGTGTGTGCTTGCGTGCG 62.732 57.895 0.00 0.00 35.36 5.34
184 185 4.962122 GTGTGTGCTTGCGTGCGG 62.962 66.667 0.00 0.00 35.36 5.69
191 192 4.671549 CTTGCGTGCGGCTGTGTG 62.672 66.667 0.00 0.00 44.05 3.82
195 196 3.572539 CGTGCGGCTGTGTGTGTT 61.573 61.111 0.00 0.00 0.00 3.32
196 197 2.024588 GTGCGGCTGTGTGTGTTG 59.975 61.111 0.00 0.00 0.00 3.33
197 198 2.124942 TGCGGCTGTGTGTGTTGA 60.125 55.556 0.00 0.00 0.00 3.18
198 199 1.525765 TGCGGCTGTGTGTGTTGAT 60.526 52.632 0.00 0.00 0.00 2.57
199 200 1.081906 GCGGCTGTGTGTGTTGATG 60.082 57.895 0.00 0.00 0.00 3.07
200 201 1.081906 CGGCTGTGTGTGTTGATGC 60.082 57.895 0.00 0.00 0.00 3.91
201 202 1.081906 GGCTGTGTGTGTTGATGCG 60.082 57.895 0.00 0.00 0.00 4.73
202 203 1.648720 GCTGTGTGTGTTGATGCGT 59.351 52.632 0.00 0.00 0.00 5.24
203 204 0.658244 GCTGTGTGTGTTGATGCGTG 60.658 55.000 0.00 0.00 0.00 5.34
204 205 0.041047 CTGTGTGTGTTGATGCGTGG 60.041 55.000 0.00 0.00 0.00 4.94
205 206 1.282570 GTGTGTGTTGATGCGTGGG 59.717 57.895 0.00 0.00 0.00 4.61
206 207 1.153066 TGTGTGTTGATGCGTGGGT 60.153 52.632 0.00 0.00 0.00 4.51
207 208 1.282570 GTGTGTTGATGCGTGGGTG 59.717 57.895 0.00 0.00 0.00 4.61
208 209 1.153066 TGTGTTGATGCGTGGGTGT 60.153 52.632 0.00 0.00 0.00 4.16
209 210 1.282570 GTGTTGATGCGTGGGTGTG 59.717 57.895 0.00 0.00 0.00 3.82
210 211 1.153066 TGTTGATGCGTGGGTGTGT 60.153 52.632 0.00 0.00 0.00 3.72
211 212 1.282570 GTTGATGCGTGGGTGTGTG 59.717 57.895 0.00 0.00 0.00 3.82
212 213 1.153066 TTGATGCGTGGGTGTGTGT 60.153 52.632 0.00 0.00 0.00 3.72
213 214 0.749818 TTGATGCGTGGGTGTGTGTT 60.750 50.000 0.00 0.00 0.00 3.32
214 215 1.282570 GATGCGTGGGTGTGTGTTG 59.717 57.895 0.00 0.00 0.00 3.33
215 216 2.731587 GATGCGTGGGTGTGTGTTGC 62.732 60.000 0.00 0.00 0.00 4.17
216 217 3.209097 GCGTGGGTGTGTGTTGCT 61.209 61.111 0.00 0.00 0.00 3.91
217 218 2.715005 CGTGGGTGTGTGTTGCTG 59.285 61.111 0.00 0.00 0.00 4.41
218 219 2.112198 CGTGGGTGTGTGTTGCTGT 61.112 57.895 0.00 0.00 0.00 4.40
219 220 1.433064 GTGGGTGTGTGTTGCTGTG 59.567 57.895 0.00 0.00 0.00 3.66
220 221 1.001517 TGGGTGTGTGTTGCTGTGT 60.002 52.632 0.00 0.00 0.00 3.72
221 222 1.311651 TGGGTGTGTGTTGCTGTGTG 61.312 55.000 0.00 0.00 0.00 3.82
222 223 1.226660 GGTGTGTGTTGCTGTGTGC 60.227 57.895 0.00 0.00 43.25 4.57
223 224 1.656818 GGTGTGTGTTGCTGTGTGCT 61.657 55.000 0.00 0.00 43.37 4.40
224 225 0.523968 GTGTGTGTTGCTGTGTGCTG 60.524 55.000 0.00 0.00 43.37 4.41
225 226 1.587088 GTGTGTTGCTGTGTGCTGC 60.587 57.895 0.00 0.00 43.37 5.25
226 227 2.352686 GTGTTGCTGTGTGCTGCG 60.353 61.111 0.00 0.00 43.37 5.18
227 228 2.823593 TGTTGCTGTGTGCTGCGT 60.824 55.556 0.00 0.00 43.37 5.24
228 229 2.352686 GTTGCTGTGTGCTGCGTG 60.353 61.111 0.00 0.00 43.37 5.34
229 230 4.254672 TTGCTGTGTGCTGCGTGC 62.255 61.111 0.00 0.00 43.37 5.34
238 239 2.332514 GCTGCGTGCATGTGTGTT 59.667 55.556 7.93 0.00 42.31 3.32
239 240 2.012414 GCTGCGTGCATGTGTGTTG 61.012 57.895 7.93 0.00 42.31 3.33
240 241 2.012414 CTGCGTGCATGTGTGTTGC 61.012 57.895 7.93 0.00 40.55 4.17
241 242 3.092841 GCGTGCATGTGTGTTGCG 61.093 61.111 7.93 0.00 43.10 4.85
242 243 2.327592 CGTGCATGTGTGTTGCGT 59.672 55.556 0.00 0.00 43.10 5.24
243 244 1.298264 CGTGCATGTGTGTTGCGTT 60.298 52.632 0.00 0.00 43.10 4.84
244 245 1.261510 CGTGCATGTGTGTTGCGTTC 61.262 55.000 0.00 0.00 43.10 3.95
245 246 0.029300 GTGCATGTGTGTTGCGTTCT 59.971 50.000 0.00 0.00 43.10 3.01
246 247 0.737804 TGCATGTGTGTTGCGTTCTT 59.262 45.000 0.00 0.00 43.10 2.52
247 248 1.122849 GCATGTGTGTTGCGTTCTTG 58.877 50.000 0.00 0.00 0.00 3.02
248 249 1.533756 GCATGTGTGTTGCGTTCTTGT 60.534 47.619 0.00 0.00 0.00 3.16
249 250 2.110990 CATGTGTGTTGCGTTCTTGTG 58.889 47.619 0.00 0.00 0.00 3.33
250 251 1.160989 TGTGTGTTGCGTTCTTGTGT 58.839 45.000 0.00 0.00 0.00 3.72
251 252 2.347731 TGTGTGTTGCGTTCTTGTGTA 58.652 42.857 0.00 0.00 0.00 2.90
252 253 2.939756 TGTGTGTTGCGTTCTTGTGTAT 59.060 40.909 0.00 0.00 0.00 2.29
253 254 3.242576 TGTGTGTTGCGTTCTTGTGTATG 60.243 43.478 0.00 0.00 0.00 2.39
254 255 2.939756 TGTGTTGCGTTCTTGTGTATGT 59.060 40.909 0.00 0.00 0.00 2.29
255 256 3.242576 TGTGTTGCGTTCTTGTGTATGTG 60.243 43.478 0.00 0.00 0.00 3.21
256 257 2.286713 TGTTGCGTTCTTGTGTATGTGC 60.287 45.455 0.00 0.00 0.00 4.57
257 258 1.877637 TGCGTTCTTGTGTATGTGCT 58.122 45.000 0.00 0.00 0.00 4.40
258 259 1.530720 TGCGTTCTTGTGTATGTGCTG 59.469 47.619 0.00 0.00 0.00 4.41
259 260 1.725931 GCGTTCTTGTGTATGTGCTGC 60.726 52.381 0.00 0.00 0.00 5.25
260 261 1.530720 CGTTCTTGTGTATGTGCTGCA 59.469 47.619 0.00 0.00 0.00 4.41
261 262 2.160219 CGTTCTTGTGTATGTGCTGCAT 59.840 45.455 5.27 0.00 41.42 3.96
262 263 3.495193 GTTCTTGTGTATGTGCTGCATG 58.505 45.455 5.27 0.00 38.47 4.06
263 264 2.781923 TCTTGTGTATGTGCTGCATGT 58.218 42.857 5.27 0.00 38.47 3.21
264 265 2.485038 TCTTGTGTATGTGCTGCATGTG 59.515 45.455 5.27 0.00 38.47 3.21
265 266 1.894881 TGTGTATGTGCTGCATGTGT 58.105 45.000 5.27 0.00 38.47 3.72
266 267 1.536331 TGTGTATGTGCTGCATGTGTG 59.464 47.619 5.27 0.00 38.47 3.82
267 268 1.536766 GTGTATGTGCTGCATGTGTGT 59.463 47.619 5.27 0.00 38.47 3.72
268 269 1.536331 TGTATGTGCTGCATGTGTGTG 59.464 47.619 5.27 0.00 38.47 3.82
269 270 0.522626 TATGTGCTGCATGTGTGTGC 59.477 50.000 5.27 0.00 45.25 4.57
270 271 1.176619 ATGTGCTGCATGTGTGTGCT 61.177 50.000 5.27 0.00 45.27 4.40
271 272 0.534652 TGTGCTGCATGTGTGTGCTA 60.535 50.000 5.27 0.00 45.27 3.49
272 273 0.110056 GTGCTGCATGTGTGTGCTAC 60.110 55.000 5.27 0.00 45.27 3.58
273 274 0.250424 TGCTGCATGTGTGTGCTACT 60.250 50.000 0.00 0.00 45.27 2.57
274 275 0.167470 GCTGCATGTGTGTGCTACTG 59.833 55.000 0.00 0.00 45.27 2.74
275 276 0.167470 CTGCATGTGTGTGCTACTGC 59.833 55.000 0.00 0.00 45.27 4.40
276 277 1.236616 TGCATGTGTGTGCTACTGCC 61.237 55.000 0.00 0.00 45.27 4.85
277 278 1.926511 GCATGTGTGTGCTACTGCCC 61.927 60.000 0.00 0.00 41.82 5.36
278 279 1.002134 ATGTGTGTGCTACTGCCCC 60.002 57.895 0.00 0.00 38.71 5.80
279 280 1.778017 ATGTGTGTGCTACTGCCCCA 61.778 55.000 0.00 0.00 38.71 4.96
280 281 1.002134 GTGTGTGCTACTGCCCCAT 60.002 57.895 0.00 0.00 38.71 4.00
281 282 0.251916 GTGTGTGCTACTGCCCCATA 59.748 55.000 0.00 0.00 38.71 2.74
282 283 0.251916 TGTGTGCTACTGCCCCATAC 59.748 55.000 0.00 0.00 38.71 2.39
283 284 0.541863 GTGTGCTACTGCCCCATACT 59.458 55.000 0.00 0.00 38.71 2.12
284 285 0.541392 TGTGCTACTGCCCCATACTG 59.459 55.000 0.00 0.00 38.71 2.74
285 286 0.830648 GTGCTACTGCCCCATACTGA 59.169 55.000 0.00 0.00 38.71 3.41
286 287 1.417890 GTGCTACTGCCCCATACTGAT 59.582 52.381 0.00 0.00 38.71 2.90
287 288 1.417517 TGCTACTGCCCCATACTGATG 59.582 52.381 0.00 0.00 38.71 3.07
288 289 1.417890 GCTACTGCCCCATACTGATGT 59.582 52.381 0.00 0.00 0.00 3.06
289 290 2.158755 GCTACTGCCCCATACTGATGTT 60.159 50.000 0.00 0.00 0.00 2.71
290 291 2.425143 ACTGCCCCATACTGATGTTG 57.575 50.000 0.00 0.00 0.00 3.33
291 292 1.635487 ACTGCCCCATACTGATGTTGT 59.365 47.619 0.00 0.00 0.00 3.32
292 293 2.019249 CTGCCCCATACTGATGTTGTG 58.981 52.381 0.00 0.00 0.00 3.33
293 294 1.354031 TGCCCCATACTGATGTTGTGT 59.646 47.619 0.00 0.00 0.00 3.72
294 295 1.745087 GCCCCATACTGATGTTGTGTG 59.255 52.381 0.00 0.00 0.00 3.82
295 296 2.879756 GCCCCATACTGATGTTGTGTGT 60.880 50.000 0.00 0.00 0.00 3.72
296 297 2.749076 CCCCATACTGATGTTGTGTGTG 59.251 50.000 0.00 0.00 0.00 3.82
297 298 3.558958 CCCCATACTGATGTTGTGTGTGA 60.559 47.826 0.00 0.00 0.00 3.58
298 299 3.686241 CCCATACTGATGTTGTGTGTGAG 59.314 47.826 0.00 0.00 0.00 3.51
299 300 3.125829 CCATACTGATGTTGTGTGTGAGC 59.874 47.826 0.00 0.00 0.00 4.26
300 301 2.627515 ACTGATGTTGTGTGTGAGCT 57.372 45.000 0.00 0.00 0.00 4.09
301 302 3.751479 ACTGATGTTGTGTGTGAGCTA 57.249 42.857 0.00 0.00 0.00 3.32
302 303 3.393800 ACTGATGTTGTGTGTGAGCTAC 58.606 45.455 0.00 0.00 0.00 3.58
303 304 3.070159 ACTGATGTTGTGTGTGAGCTACT 59.930 43.478 0.00 0.00 0.00 2.57
304 305 3.392882 TGATGTTGTGTGTGAGCTACTG 58.607 45.455 0.00 0.00 0.00 2.74
305 306 2.979814 TGTTGTGTGTGAGCTACTGT 57.020 45.000 0.00 0.00 0.00 3.55
306 307 2.821546 TGTTGTGTGTGAGCTACTGTC 58.178 47.619 0.00 0.00 0.00 3.51
307 308 2.430694 TGTTGTGTGTGAGCTACTGTCT 59.569 45.455 0.00 0.00 0.00 3.41
308 309 3.053455 GTTGTGTGTGAGCTACTGTCTC 58.947 50.000 0.00 0.00 0.00 3.36
309 310 1.266989 TGTGTGTGAGCTACTGTCTCG 59.733 52.381 0.00 0.00 33.41 4.04
310 311 0.241213 TGTGTGAGCTACTGTCTCGC 59.759 55.000 0.00 3.79 40.46 5.03
311 312 0.241213 GTGTGAGCTACTGTCTCGCA 59.759 55.000 8.23 8.23 45.49 5.10
312 313 0.241213 TGTGAGCTACTGTCTCGCAC 59.759 55.000 8.23 8.32 43.61 5.34
313 314 0.241213 GTGAGCTACTGTCTCGCACA 59.759 55.000 9.80 3.14 39.97 4.57
314 315 0.241213 TGAGCTACTGTCTCGCACAC 59.759 55.000 0.00 0.00 33.41 3.82
315 316 0.241213 GAGCTACTGTCTCGCACACA 59.759 55.000 0.00 0.00 0.00 3.72
316 317 0.039074 AGCTACTGTCTCGCACACAC 60.039 55.000 0.00 0.00 0.00 3.82
317 318 0.318699 GCTACTGTCTCGCACACACA 60.319 55.000 0.00 0.00 0.00 3.72
318 319 1.670087 GCTACTGTCTCGCACACACAT 60.670 52.381 0.00 0.00 0.00 3.21
319 320 1.988467 CTACTGTCTCGCACACACATG 59.012 52.381 0.00 0.00 0.00 3.21
320 321 0.389025 ACTGTCTCGCACACACATGA 59.611 50.000 0.00 0.00 0.00 3.07
321 322 1.202521 ACTGTCTCGCACACACATGAA 60.203 47.619 0.00 0.00 0.00 2.57
322 323 1.458445 CTGTCTCGCACACACATGAAG 59.542 52.381 0.00 0.00 0.00 3.02
323 324 0.792640 GTCTCGCACACACATGAAGG 59.207 55.000 0.00 0.00 0.00 3.46
324 325 0.320683 TCTCGCACACACATGAAGGG 60.321 55.000 0.00 0.00 0.00 3.95
325 326 1.915614 CTCGCACACACATGAAGGGC 61.916 60.000 0.00 0.00 0.00 5.19
326 327 2.260154 CGCACACACATGAAGGGCA 61.260 57.895 0.00 0.00 0.00 5.36
327 328 1.794151 CGCACACACATGAAGGGCAA 61.794 55.000 0.00 0.00 0.00 4.52
328 329 0.388659 GCACACACATGAAGGGCAAA 59.611 50.000 0.00 0.00 0.00 3.68
329 330 1.202510 GCACACACATGAAGGGCAAAA 60.203 47.619 0.00 0.00 0.00 2.44
330 331 2.746269 CACACACATGAAGGGCAAAAG 58.254 47.619 0.00 0.00 0.00 2.27
331 332 1.688197 ACACACATGAAGGGCAAAAGG 59.312 47.619 0.00 0.00 0.00 3.11
332 333 1.001181 CACACATGAAGGGCAAAAGGG 59.999 52.381 0.00 0.00 0.00 3.95
333 334 1.341080 CACATGAAGGGCAAAAGGGT 58.659 50.000 0.00 0.00 0.00 4.34
334 335 1.273327 CACATGAAGGGCAAAAGGGTC 59.727 52.381 0.00 0.00 0.00 4.46
335 336 1.147817 ACATGAAGGGCAAAAGGGTCT 59.852 47.619 0.00 0.00 0.00 3.85
336 337 2.250924 CATGAAGGGCAAAAGGGTCTT 58.749 47.619 0.00 0.00 0.00 3.01
337 338 2.470057 TGAAGGGCAAAAGGGTCTTT 57.530 45.000 0.00 0.00 0.00 2.52
338 339 2.758130 TGAAGGGCAAAAGGGTCTTTT 58.242 42.857 0.33 0.33 0.00 2.27
339 340 2.698274 TGAAGGGCAAAAGGGTCTTTTC 59.302 45.455 3.00 0.32 0.00 2.29
340 341 2.470057 AGGGCAAAAGGGTCTTTTCA 57.530 45.000 3.00 0.00 0.00 2.69
341 342 2.319844 AGGGCAAAAGGGTCTTTTCAG 58.680 47.619 3.00 0.00 0.00 3.02
342 343 1.344438 GGGCAAAAGGGTCTTTTCAGG 59.656 52.381 3.00 0.00 0.00 3.86
343 344 2.039418 GGCAAAAGGGTCTTTTCAGGT 58.961 47.619 3.00 0.00 0.00 4.00
344 345 2.224042 GGCAAAAGGGTCTTTTCAGGTG 60.224 50.000 3.00 0.00 0.00 4.00
345 346 2.430694 GCAAAAGGGTCTTTTCAGGTGT 59.569 45.455 3.00 0.00 0.00 4.16
346 347 3.490933 GCAAAAGGGTCTTTTCAGGTGTC 60.491 47.826 3.00 0.00 0.00 3.67
347 348 3.662759 AAAGGGTCTTTTCAGGTGTCA 57.337 42.857 0.00 0.00 0.00 3.58
348 349 3.884037 AAGGGTCTTTTCAGGTGTCAT 57.116 42.857 0.00 0.00 0.00 3.06
349 350 3.884037 AGGGTCTTTTCAGGTGTCATT 57.116 42.857 0.00 0.00 0.00 2.57
350 351 4.184649 AGGGTCTTTTCAGGTGTCATTT 57.815 40.909 0.00 0.00 0.00 2.32
351 352 5.319043 AGGGTCTTTTCAGGTGTCATTTA 57.681 39.130 0.00 0.00 0.00 1.40
352 353 5.316987 AGGGTCTTTTCAGGTGTCATTTAG 58.683 41.667 0.00 0.00 0.00 1.85
353 354 5.070685 GGGTCTTTTCAGGTGTCATTTAGT 58.929 41.667 0.00 0.00 0.00 2.24
354 355 5.181433 GGGTCTTTTCAGGTGTCATTTAGTC 59.819 44.000 0.00 0.00 0.00 2.59
355 356 5.998363 GGTCTTTTCAGGTGTCATTTAGTCT 59.002 40.000 0.00 0.00 0.00 3.24
356 357 6.486993 GGTCTTTTCAGGTGTCATTTAGTCTT 59.513 38.462 0.00 0.00 0.00 3.01
357 358 7.660208 GGTCTTTTCAGGTGTCATTTAGTCTTA 59.340 37.037 0.00 0.00 0.00 2.10
358 359 9.052759 GTCTTTTCAGGTGTCATTTAGTCTTAA 57.947 33.333 0.00 0.00 0.00 1.85
359 360 9.621629 TCTTTTCAGGTGTCATTTAGTCTTAAA 57.378 29.630 0.00 0.00 33.54 1.52
363 364 8.335532 TCAGGTGTCATTTAGTCTTAAAATGG 57.664 34.615 7.81 0.00 42.17 3.16
364 365 8.160765 TCAGGTGTCATTTAGTCTTAAAATGGA 58.839 33.333 7.81 0.00 42.17 3.41
365 366 8.237267 CAGGTGTCATTTAGTCTTAAAATGGAC 58.763 37.037 7.81 5.84 42.17 4.02
366 367 7.119262 AGGTGTCATTTAGTCTTAAAATGGACG 59.881 37.037 7.81 0.00 42.17 4.79
367 368 7.118680 GGTGTCATTTAGTCTTAAAATGGACGA 59.881 37.037 7.81 0.00 42.17 4.20
368 369 8.500773 GTGTCATTTAGTCTTAAAATGGACGAA 58.499 33.333 7.81 0.00 42.17 3.85
369 370 9.058174 TGTCATTTAGTCTTAAAATGGACGAAA 57.942 29.630 7.81 0.00 42.17 3.46
370 371 9.887406 GTCATTTAGTCTTAAAATGGACGAAAA 57.113 29.630 7.81 0.00 42.17 2.29
373 374 8.736751 TTTAGTCTTAAAATGGACGAAAATGC 57.263 30.769 0.00 0.00 35.39 3.56
374 375 5.709966 AGTCTTAAAATGGACGAAAATGCC 58.290 37.500 0.00 0.00 37.52 4.40
375 376 5.242838 AGTCTTAAAATGGACGAAAATGCCA 59.757 36.000 0.00 0.00 37.52 4.92
376 377 6.071391 AGTCTTAAAATGGACGAAAATGCCAT 60.071 34.615 0.00 0.00 43.95 4.40
377 378 7.122055 AGTCTTAAAATGGACGAAAATGCCATA 59.878 33.333 0.00 0.00 41.36 2.74
378 379 7.757624 GTCTTAAAATGGACGAAAATGCCATAA 59.242 33.333 0.00 0.00 41.36 1.90
379 380 8.307483 TCTTAAAATGGACGAAAATGCCATAAA 58.693 29.630 0.00 0.00 41.36 1.40
380 381 6.966435 AAAATGGACGAAAATGCCATAAAG 57.034 33.333 0.00 0.00 41.36 1.85
381 382 4.654091 ATGGACGAAAATGCCATAAAGG 57.346 40.909 0.00 0.00 40.47 3.11
382 383 2.757868 TGGACGAAAATGCCATAAAGGG 59.242 45.455 0.00 0.00 38.09 3.95
397 398 6.935167 CCATAAAGGGCACAAATTTTAGACT 58.065 36.000 0.00 0.00 0.00 3.24
398 399 7.035612 CCATAAAGGGCACAAATTTTAGACTC 58.964 38.462 0.00 0.00 0.00 3.36
399 400 4.766404 AAGGGCACAAATTTTAGACTCG 57.234 40.909 0.00 0.00 0.00 4.18
400 401 3.751518 AGGGCACAAATTTTAGACTCGT 58.248 40.909 0.00 0.00 0.00 4.18
401 402 4.142038 AGGGCACAAATTTTAGACTCGTT 58.858 39.130 0.00 0.00 0.00 3.85
402 403 4.023193 AGGGCACAAATTTTAGACTCGTTG 60.023 41.667 0.00 0.00 0.00 4.10
403 404 4.261447 GGGCACAAATTTTAGACTCGTTGT 60.261 41.667 0.00 0.00 0.00 3.32
404 405 5.278604 GGCACAAATTTTAGACTCGTTGTT 58.721 37.500 0.00 0.00 0.00 2.83
405 406 6.432107 GGCACAAATTTTAGACTCGTTGTTA 58.568 36.000 0.00 0.00 0.00 2.41
406 407 6.577427 GGCACAAATTTTAGACTCGTTGTTAG 59.423 38.462 0.00 0.00 0.00 2.34
407 408 7.349711 GCACAAATTTTAGACTCGTTGTTAGA 58.650 34.615 0.00 0.00 0.00 2.10
408 409 8.015658 GCACAAATTTTAGACTCGTTGTTAGAT 58.984 33.333 0.00 0.00 0.00 1.98
412 413 8.943909 AATTTTAGACTCGTTGTTAGATAGGG 57.056 34.615 0.00 0.00 0.00 3.53
413 414 7.707624 TTTTAGACTCGTTGTTAGATAGGGA 57.292 36.000 0.00 0.00 0.00 4.20
414 415 7.707624 TTTAGACTCGTTGTTAGATAGGGAA 57.292 36.000 0.00 0.00 0.00 3.97
415 416 7.707624 TTAGACTCGTTGTTAGATAGGGAAA 57.292 36.000 0.00 0.00 0.00 3.13
416 417 6.600882 AGACTCGTTGTTAGATAGGGAAAA 57.399 37.500 0.00 0.00 0.00 2.29
417 418 7.001099 AGACTCGTTGTTAGATAGGGAAAAA 57.999 36.000 0.00 0.00 0.00 1.94
444 445 8.512138 AGATTTTCAGTGTTAAATAGGGAAACG 58.488 33.333 6.13 0.00 0.00 3.60
445 446 7.804843 TTTTCAGTGTTAAATAGGGAAACGA 57.195 32.000 0.00 0.00 0.00 3.85
446 447 7.804843 TTTCAGTGTTAAATAGGGAAACGAA 57.195 32.000 0.00 0.00 0.00 3.85
447 448 7.804843 TTCAGTGTTAAATAGGGAAACGAAA 57.195 32.000 0.00 0.00 0.00 3.46
448 449 7.989416 TCAGTGTTAAATAGGGAAACGAAAT 57.011 32.000 0.00 0.00 0.00 2.17
449 450 8.398878 TCAGTGTTAAATAGGGAAACGAAATT 57.601 30.769 0.00 0.00 0.00 1.82
450 451 8.852135 TCAGTGTTAAATAGGGAAACGAAATTT 58.148 29.630 0.00 0.00 0.00 1.82
458 459 8.589701 AATAGGGAAACGAAATTTAAGATGGT 57.410 30.769 0.00 0.00 0.00 3.55
459 460 6.267496 AGGGAAACGAAATTTAAGATGGTG 57.733 37.500 0.00 0.00 0.00 4.17
460 461 5.773176 AGGGAAACGAAATTTAAGATGGTGT 59.227 36.000 0.00 0.00 0.00 4.16
461 462 6.266786 AGGGAAACGAAATTTAAGATGGTGTT 59.733 34.615 0.00 0.00 0.00 3.32
462 463 7.449086 AGGGAAACGAAATTTAAGATGGTGTTA 59.551 33.333 0.00 0.00 0.00 2.41
463 464 8.248253 GGGAAACGAAATTTAAGATGGTGTTAT 58.752 33.333 0.00 0.00 0.00 1.89
477 478 9.975218 AAGATGGTGTTATATAAGGAGTTGTTT 57.025 29.630 0.00 0.00 0.00 2.83
478 479 9.614792 AGATGGTGTTATATAAGGAGTTGTTTC 57.385 33.333 0.00 0.00 0.00 2.78
479 480 9.614792 GATGGTGTTATATAAGGAGTTGTTTCT 57.385 33.333 0.00 0.00 0.00 2.52
480 481 9.975218 ATGGTGTTATATAAGGAGTTGTTTCTT 57.025 29.630 0.00 0.00 0.00 2.52
575 577 1.808945 GTCATGCTGGTCTGGTTCTTG 59.191 52.381 0.00 0.00 0.00 3.02
606 608 2.054232 TTCCTAGTCCTACTCTGCCG 57.946 55.000 0.00 0.00 0.00 5.69
607 609 0.465824 TCCTAGTCCTACTCTGCCGC 60.466 60.000 0.00 0.00 0.00 6.53
637 639 3.303395 GCAAGAACAAAAGAGACCGTGAG 60.303 47.826 0.00 0.00 0.00 3.51
639 641 3.458189 AGAACAAAAGAGACCGTGAGTG 58.542 45.455 0.00 0.00 0.00 3.51
720 722 1.812571 CTAGCCTCGTGCCAAACATTT 59.187 47.619 0.00 0.00 42.71 2.32
737 739 3.810941 ACATTTAGCAAAACCGAACGAGA 59.189 39.130 0.00 0.00 0.00 4.04
739 741 2.806608 TAGCAAAACCGAACGAGACT 57.193 45.000 0.00 0.00 0.00 3.24
787 789 1.134788 CGACTTCCATAGCGGGAAAGT 60.135 52.381 8.54 8.51 45.87 2.66
841 853 4.052229 CCCGACCTTGACGCGTCT 62.052 66.667 36.27 19.29 0.00 4.18
842 854 2.049433 CCGACCTTGACGCGTCTT 60.049 61.111 36.27 19.81 0.00 3.01
843 855 2.372690 CCGACCTTGACGCGTCTTG 61.373 63.158 36.27 27.19 0.00 3.02
846 858 1.618640 GACCTTGACGCGTCTTGCTC 61.619 60.000 36.27 22.12 43.27 4.26
879 891 1.210967 TCCGCGTCCTCCCAATTATTT 59.789 47.619 4.92 0.00 0.00 1.40
1090 1104 4.106925 CCAGCCTCCCACAGCTCC 62.107 72.222 0.00 0.00 37.18 4.70
1142 1160 3.551846 CTCCCTCTACACTTCTCTCTCC 58.448 54.545 0.00 0.00 0.00 3.71
1421 1454 4.562425 CGCACCACCACCACCACT 62.562 66.667 0.00 0.00 0.00 4.00
1614 1656 3.721706 GCCCCTCACCTGACCTGG 61.722 72.222 0.00 0.00 0.00 4.45
1643 1693 4.070552 GCTCCTTGCTCGTCCCGT 62.071 66.667 0.00 0.00 38.95 5.28
1686 1736 1.471287 TCCGTGATCTGAAATCGTCGT 59.529 47.619 0.00 0.00 0.00 4.34
1999 2059 5.073428 TGGGCATCAATGTACAAACTACAA 58.927 37.500 0.00 0.00 0.00 2.41
2052 2112 7.915923 CGTGATCTTAGCTCTTAAGTATGTCAA 59.084 37.037 1.63 0.00 39.83 3.18
2111 2175 1.952296 GGAATGATTGAGCCAGCGATT 59.048 47.619 0.00 0.00 0.00 3.34
2233 2297 3.067106 CTGGCTGTACCTGTACTTTGTG 58.933 50.000 8.75 0.00 40.22 3.33
2242 2341 4.700700 ACCTGTACTTTGTGTCTTGTACC 58.299 43.478 0.00 0.00 35.68 3.34
2412 2514 4.819630 TGTTATCACAAGTTGTCCACTTCC 59.180 41.667 5.27 0.00 44.60 3.46
2463 2565 8.615211 CATGTGTAACTATGATGCATAAACAGT 58.385 33.333 0.00 0.00 38.04 3.55
2513 2615 4.280929 GGTAACCCATCTCTTGCTTGTTTT 59.719 41.667 0.00 0.00 0.00 2.43
2614 2716 2.118313 TTGGTCATGCATGTGAGAGG 57.882 50.000 25.43 0.00 0.00 3.69
2618 2720 0.746923 TCATGCATGTGAGAGGCAGC 60.747 55.000 25.43 0.00 46.37 5.25
2635 2740 3.600388 GCAGCTGGTCAGTAGTTACATT 58.400 45.455 17.12 0.00 0.00 2.71
2901 3006 3.527507 AGTCCTCTTCTACTGTCACCA 57.472 47.619 0.00 0.00 0.00 4.17
2937 3043 3.081804 CCTCCGCTCCAAAATAAGTGTT 58.918 45.455 0.00 0.00 0.00 3.32
2941 3047 5.064558 TCCGCTCCAAAATAAGTGTTGTAA 58.935 37.500 0.00 0.00 0.00 2.41
2991 3098 9.997482 TTCAAAACTGTGACACTTATTTTAGAC 57.003 29.630 7.20 0.00 0.00 2.59
3019 3127 9.649316 GGAGGGAGTACTTATATATCAATAGCT 57.351 37.037 0.00 0.00 0.00 3.32
3042 3150 0.464916 ACAACGACAACAACCCCCTC 60.465 55.000 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 4.351938 TGACGCCCGACACGAAGG 62.352 66.667 0.00 0.00 0.00 3.46
9 10 3.103911 GTGACGCCCGACACGAAG 61.104 66.667 7.43 0.00 32.16 3.79
10 11 3.902086 TGTGACGCCCGACACGAA 61.902 61.111 15.80 0.31 42.06 3.85
11 12 4.634133 GTGTGACGCCCGACACGA 62.634 66.667 15.80 5.46 42.06 4.35
12 13 4.934942 TGTGTGACGCCCGACACG 62.935 66.667 15.80 0.00 44.55 4.49
13 14 1.707239 TTTTGTGTGACGCCCGACAC 61.707 55.000 14.47 14.47 42.40 3.67
14 15 1.025113 TTTTTGTGTGACGCCCGACA 61.025 50.000 0.00 0.00 0.00 4.35
15 16 0.316689 CTTTTTGTGTGACGCCCGAC 60.317 55.000 0.00 0.00 0.00 4.79
16 17 1.440938 CCTTTTTGTGTGACGCCCGA 61.441 55.000 0.00 0.00 0.00 5.14
17 18 1.008995 CCTTTTTGTGTGACGCCCG 60.009 57.895 0.00 0.00 0.00 6.13
18 19 0.030235 GACCTTTTTGTGTGACGCCC 59.970 55.000 0.00 0.00 0.00 6.13
19 20 0.736053 TGACCTTTTTGTGTGACGCC 59.264 50.000 0.00 0.00 0.00 5.68
20 21 1.859998 GCTGACCTTTTTGTGTGACGC 60.860 52.381 0.00 0.00 0.00 5.19
21 22 1.268539 GGCTGACCTTTTTGTGTGACG 60.269 52.381 0.00 0.00 0.00 4.35
22 23 1.268539 CGGCTGACCTTTTTGTGTGAC 60.269 52.381 0.00 0.00 0.00 3.67
23 24 1.021202 CGGCTGACCTTTTTGTGTGA 58.979 50.000 0.00 0.00 0.00 3.58
24 25 0.594796 GCGGCTGACCTTTTTGTGTG 60.595 55.000 0.00 0.00 0.00 3.82
25 26 1.733526 GCGGCTGACCTTTTTGTGT 59.266 52.632 0.00 0.00 0.00 3.72
26 27 1.370414 CGCGGCTGACCTTTTTGTG 60.370 57.895 0.00 0.00 0.00 3.33
27 28 1.822186 ACGCGGCTGACCTTTTTGT 60.822 52.632 12.47 0.00 0.00 2.83
28 29 1.370414 CACGCGGCTGACCTTTTTG 60.370 57.895 12.47 0.00 0.00 2.44
29 30 1.098712 TTCACGCGGCTGACCTTTTT 61.099 50.000 12.47 0.00 0.00 1.94
30 31 1.098712 TTTCACGCGGCTGACCTTTT 61.099 50.000 12.47 0.00 0.00 2.27
31 32 0.889186 ATTTCACGCGGCTGACCTTT 60.889 50.000 12.47 0.00 0.00 3.11
32 33 0.036765 TATTTCACGCGGCTGACCTT 60.037 50.000 12.47 0.00 0.00 3.50
33 34 0.460284 CTATTTCACGCGGCTGACCT 60.460 55.000 12.47 0.00 0.00 3.85
34 35 0.739813 ACTATTTCACGCGGCTGACC 60.740 55.000 12.47 0.00 0.00 4.02
35 36 1.076332 AACTATTTCACGCGGCTGAC 58.924 50.000 12.47 0.00 0.00 3.51
36 37 1.730064 GAAACTATTTCACGCGGCTGA 59.270 47.619 12.47 2.44 39.45 4.26
37 38 1.463056 TGAAACTATTTCACGCGGCTG 59.537 47.619 12.47 0.00 44.21 4.85
38 39 1.803334 TGAAACTATTTCACGCGGCT 58.197 45.000 12.47 0.00 44.21 5.52
45 46 3.134574 ACTGCCCGTGAAACTATTTCA 57.865 42.857 0.00 0.00 46.68 2.69
46 47 3.500680 TGAACTGCCCGTGAAACTATTTC 59.499 43.478 0.00 0.00 40.08 2.17
47 48 3.482436 TGAACTGCCCGTGAAACTATTT 58.518 40.909 0.00 0.00 31.75 1.40
48 49 3.134574 TGAACTGCCCGTGAAACTATT 57.865 42.857 0.00 0.00 31.75 1.73
49 50 2.851263 TGAACTGCCCGTGAAACTAT 57.149 45.000 0.00 0.00 31.75 2.12
50 51 2.851263 ATGAACTGCCCGTGAAACTA 57.149 45.000 0.00 0.00 31.75 2.24
51 52 1.880027 GAATGAACTGCCCGTGAAACT 59.120 47.619 0.00 0.00 31.75 2.66
52 53 1.880027 AGAATGAACTGCCCGTGAAAC 59.120 47.619 0.00 0.00 0.00 2.78
53 54 1.879380 CAGAATGAACTGCCCGTGAAA 59.121 47.619 0.00 0.00 39.69 2.69
54 55 1.202758 ACAGAATGAACTGCCCGTGAA 60.203 47.619 0.00 0.00 39.69 3.18
55 56 0.396435 ACAGAATGAACTGCCCGTGA 59.604 50.000 0.00 0.00 39.69 4.35
56 57 0.518636 CACAGAATGAACTGCCCGTG 59.481 55.000 0.00 0.00 39.69 4.94
57 58 0.396435 TCACAGAATGAACTGCCCGT 59.604 50.000 0.00 0.00 39.69 5.28
58 59 1.742761 ATCACAGAATGAACTGCCCG 58.257 50.000 0.00 0.00 41.93 6.13
59 60 3.507233 TCAAATCACAGAATGAACTGCCC 59.493 43.478 0.00 0.00 41.93 5.36
60 61 4.771590 TCAAATCACAGAATGAACTGCC 57.228 40.909 0.00 0.00 41.93 4.85
61 62 6.864685 TGAAATCAAATCACAGAATGAACTGC 59.135 34.615 0.00 0.00 41.93 4.40
62 63 8.981724 ATGAAATCAAATCACAGAATGAACTG 57.018 30.769 0.00 0.00 41.93 3.16
87 88 9.153721 GCAAAATTGACAAATTTGATCTATGGA 57.846 29.630 25.81 2.42 43.63 3.41
88 89 8.392612 GGCAAAATTGACAAATTTGATCTATGG 58.607 33.333 25.81 12.90 43.63 2.74
89 90 8.111836 CGGCAAAATTGACAAATTTGATCTATG 58.888 33.333 25.81 13.77 43.63 2.23
90 91 7.201548 GCGGCAAAATTGACAAATTTGATCTAT 60.202 33.333 25.81 15.60 43.63 1.98
91 92 6.090628 GCGGCAAAATTGACAAATTTGATCTA 59.909 34.615 25.81 14.22 43.63 1.98
92 93 5.106987 GCGGCAAAATTGACAAATTTGATCT 60.107 36.000 25.81 2.04 43.63 2.75
93 94 5.081394 GCGGCAAAATTGACAAATTTGATC 58.919 37.500 25.81 16.93 43.63 2.92
94 95 4.377226 CGCGGCAAAATTGACAAATTTGAT 60.377 37.500 25.81 8.92 43.63 2.57
95 96 3.060003 CGCGGCAAAATTGACAAATTTGA 60.060 39.130 25.81 2.69 43.63 2.69
96 97 3.216819 CGCGGCAAAATTGACAAATTTG 58.783 40.909 19.89 19.89 43.63 2.32
97 98 2.869192 ACGCGGCAAAATTGACAAATTT 59.131 36.364 12.47 0.00 45.81 1.82
98 99 2.220593 CACGCGGCAAAATTGACAAATT 59.779 40.909 12.47 0.00 35.35 1.82
99 100 1.791785 CACGCGGCAAAATTGACAAAT 59.208 42.857 12.47 0.00 35.35 2.32
100 101 1.203928 CACGCGGCAAAATTGACAAA 58.796 45.000 12.47 0.00 35.35 2.83
101 102 1.211818 GCACGCGGCAAAATTGACAA 61.212 50.000 12.47 0.00 43.97 3.18
102 103 1.659954 GCACGCGGCAAAATTGACA 60.660 52.632 12.47 0.00 43.97 3.58
103 104 3.146396 GCACGCGGCAAAATTGAC 58.854 55.556 12.47 0.00 43.97 3.18
119 120 0.856641 CAAACAACATGTGCAGCAGC 59.143 50.000 0.00 0.00 42.57 5.25
120 121 1.202440 ACCAAACAACATGTGCAGCAG 60.202 47.619 0.00 0.00 0.00 4.24
121 122 0.822811 ACCAAACAACATGTGCAGCA 59.177 45.000 0.00 0.00 0.00 4.41
122 123 1.210870 CACCAAACAACATGTGCAGC 58.789 50.000 0.00 0.00 0.00 5.25
123 124 2.195096 CACACCAAACAACATGTGCAG 58.805 47.619 0.00 0.00 36.36 4.41
124 125 1.547820 ACACACCAAACAACATGTGCA 59.452 42.857 0.00 0.00 45.08 4.57
125 126 1.925847 CACACACCAAACAACATGTGC 59.074 47.619 0.00 0.00 45.08 4.57
126 127 1.925847 GCACACACCAAACAACATGTG 59.074 47.619 0.00 1.81 46.32 3.21
127 128 1.824230 AGCACACACCAAACAACATGT 59.176 42.857 0.00 0.00 0.00 3.21
128 129 2.195096 CAGCACACACCAAACAACATG 58.805 47.619 0.00 0.00 0.00 3.21
129 130 1.824230 ACAGCACACACCAAACAACAT 59.176 42.857 0.00 0.00 0.00 2.71
130 131 1.252175 ACAGCACACACCAAACAACA 58.748 45.000 0.00 0.00 0.00 3.33
131 132 1.991965 CAACAGCACACACCAAACAAC 59.008 47.619 0.00 0.00 0.00 3.32
132 133 1.671261 GCAACAGCACACACCAAACAA 60.671 47.619 0.00 0.00 0.00 2.83
133 134 0.108898 GCAACAGCACACACCAAACA 60.109 50.000 0.00 0.00 0.00 2.83
134 135 1.139226 CGCAACAGCACACACCAAAC 61.139 55.000 0.00 0.00 0.00 2.93
135 136 1.138459 CGCAACAGCACACACCAAA 59.862 52.632 0.00 0.00 0.00 3.28
136 137 2.043405 ACGCAACAGCACACACCAA 61.043 52.632 0.00 0.00 0.00 3.67
137 138 2.437537 ACGCAACAGCACACACCA 60.438 55.556 0.00 0.00 0.00 4.17
138 139 2.024588 CACGCAACAGCACACACC 59.975 61.111 0.00 0.00 0.00 4.16
139 140 1.297598 GTCACGCAACAGCACACAC 60.298 57.895 0.00 0.00 0.00 3.82
140 141 1.449423 AGTCACGCAACAGCACACA 60.449 52.632 0.00 0.00 0.00 3.72
141 142 1.010797 CAGTCACGCAACAGCACAC 60.011 57.895 0.00 0.00 0.00 3.82
142 143 2.822758 GCAGTCACGCAACAGCACA 61.823 57.895 1.07 0.00 32.45 4.57
143 144 2.051882 GCAGTCACGCAACAGCAC 60.052 61.111 1.07 0.00 32.45 4.40
144 145 3.639008 CGCAGTCACGCAACAGCA 61.639 61.111 6.09 0.00 31.72 4.41
145 146 3.640000 ACGCAGTCACGCAACAGC 61.640 61.111 0.00 0.00 29.74 4.40
146 147 2.035617 AACACGCAGTCACGCAACAG 62.036 55.000 0.00 0.00 41.61 3.16
147 148 1.640210 AAACACGCAGTCACGCAACA 61.640 50.000 0.00 0.00 41.61 3.33
148 149 1.061887 AAACACGCAGTCACGCAAC 59.938 52.632 0.00 0.00 41.61 4.17
149 150 1.061729 CAAACACGCAGTCACGCAA 59.938 52.632 0.00 0.00 41.61 4.85
150 151 2.103647 ACAAACACGCAGTCACGCA 61.104 52.632 0.00 0.00 41.61 5.24
151 152 1.651132 CACAAACACGCAGTCACGC 60.651 57.895 0.00 0.00 41.61 5.34
152 153 0.586256 CACACAAACACGCAGTCACG 60.586 55.000 0.00 0.00 41.61 4.35
153 154 0.446222 ACACACAAACACGCAGTCAC 59.554 50.000 0.00 0.00 41.61 3.67
154 155 0.445829 CACACACAAACACGCAGTCA 59.554 50.000 0.00 0.00 41.61 3.41
155 156 0.861450 GCACACACAAACACGCAGTC 60.861 55.000 0.00 0.00 41.61 3.51
157 158 0.179166 AAGCACACACAAACACGCAG 60.179 50.000 0.00 0.00 0.00 5.18
158 159 0.455802 CAAGCACACACAAACACGCA 60.456 50.000 0.00 0.00 0.00 5.24
159 160 1.741947 GCAAGCACACACAAACACGC 61.742 55.000 0.00 0.00 0.00 5.34
160 161 1.462871 CGCAAGCACACACAAACACG 61.463 55.000 0.00 0.00 0.00 4.49
161 162 0.455972 ACGCAAGCACACACAAACAC 60.456 50.000 0.00 0.00 45.62 3.32
162 163 0.455802 CACGCAAGCACACACAAACA 60.456 50.000 0.00 0.00 45.62 2.83
163 164 1.741947 GCACGCAAGCACACACAAAC 61.742 55.000 0.00 0.00 45.62 2.93
164 165 1.515952 GCACGCAAGCACACACAAA 60.516 52.632 0.00 0.00 45.62 2.83
165 166 2.101965 GCACGCAAGCACACACAA 59.898 55.556 0.00 0.00 45.62 3.33
166 167 4.235025 CGCACGCAAGCACACACA 62.235 61.111 0.00 0.00 45.62 3.72
167 168 4.962122 CCGCACGCAAGCACACAC 62.962 66.667 0.00 0.00 45.62 3.82
174 175 4.671549 CACACAGCCGCACGCAAG 62.672 66.667 0.00 0.00 41.38 4.01
178 179 3.572539 AACACACACAGCCGCACG 61.573 61.111 0.00 0.00 0.00 5.34
179 180 1.785041 ATCAACACACACAGCCGCAC 61.785 55.000 0.00 0.00 0.00 5.34
180 181 1.525765 ATCAACACACACAGCCGCA 60.526 52.632 0.00 0.00 0.00 5.69
181 182 1.081906 CATCAACACACACAGCCGC 60.082 57.895 0.00 0.00 0.00 6.53
182 183 1.081906 GCATCAACACACACAGCCG 60.082 57.895 0.00 0.00 0.00 5.52
183 184 1.081906 CGCATCAACACACACAGCC 60.082 57.895 0.00 0.00 0.00 4.85
184 185 0.658244 CACGCATCAACACACACAGC 60.658 55.000 0.00 0.00 0.00 4.40
185 186 0.041047 CCACGCATCAACACACACAG 60.041 55.000 0.00 0.00 0.00 3.66
186 187 1.443322 CCCACGCATCAACACACACA 61.443 55.000 0.00 0.00 0.00 3.72
187 188 1.282570 CCCACGCATCAACACACAC 59.717 57.895 0.00 0.00 0.00 3.82
188 189 1.153066 ACCCACGCATCAACACACA 60.153 52.632 0.00 0.00 0.00 3.72
189 190 1.282570 CACCCACGCATCAACACAC 59.717 57.895 0.00 0.00 0.00 3.82
190 191 1.153066 ACACCCACGCATCAACACA 60.153 52.632 0.00 0.00 0.00 3.72
191 192 1.282570 CACACCCACGCATCAACAC 59.717 57.895 0.00 0.00 0.00 3.32
192 193 1.153066 ACACACCCACGCATCAACA 60.153 52.632 0.00 0.00 0.00 3.33
193 194 1.282570 CACACACCCACGCATCAAC 59.717 57.895 0.00 0.00 0.00 3.18
194 195 0.749818 AACACACACCCACGCATCAA 60.750 50.000 0.00 0.00 0.00 2.57
195 196 1.153066 AACACACACCCACGCATCA 60.153 52.632 0.00 0.00 0.00 3.07
196 197 1.282570 CAACACACACCCACGCATC 59.717 57.895 0.00 0.00 0.00 3.91
197 198 2.844451 GCAACACACACCCACGCAT 61.844 57.895 0.00 0.00 0.00 4.73
198 199 3.513438 GCAACACACACCCACGCA 61.513 61.111 0.00 0.00 0.00 5.24
199 200 3.209097 AGCAACACACACCCACGC 61.209 61.111 0.00 0.00 0.00 5.34
200 201 2.112198 ACAGCAACACACACCCACG 61.112 57.895 0.00 0.00 0.00 4.94
201 202 1.312371 ACACAGCAACACACACCCAC 61.312 55.000 0.00 0.00 0.00 4.61
202 203 1.001517 ACACAGCAACACACACCCA 60.002 52.632 0.00 0.00 0.00 4.51
203 204 1.433064 CACACAGCAACACACACCC 59.567 57.895 0.00 0.00 0.00 4.61
204 205 1.226660 GCACACAGCAACACACACC 60.227 57.895 0.00 0.00 44.79 4.16
205 206 4.382728 GCACACAGCAACACACAC 57.617 55.556 0.00 0.00 44.79 3.82
221 222 2.012414 CAACACACATGCACGCAGC 61.012 57.895 0.00 0.00 45.96 5.25
222 223 2.012414 GCAACACACATGCACGCAG 61.012 57.895 0.00 0.00 43.29 5.18
223 224 2.025870 GCAACACACATGCACGCA 59.974 55.556 0.00 0.00 43.29 5.24
224 225 3.092841 CGCAACACACATGCACGC 61.093 61.111 0.00 0.00 44.01 5.34
225 226 1.261510 GAACGCAACACACATGCACG 61.262 55.000 0.00 0.00 44.01 5.34
226 227 0.029300 AGAACGCAACACACATGCAC 59.971 50.000 0.00 0.00 44.01 4.57
227 228 0.737804 AAGAACGCAACACACATGCA 59.262 45.000 0.00 0.00 44.01 3.96
228 229 1.122849 CAAGAACGCAACACACATGC 58.877 50.000 0.00 0.00 40.41 4.06
229 230 2.110990 CACAAGAACGCAACACACATG 58.889 47.619 0.00 0.00 0.00 3.21
230 231 1.742831 ACACAAGAACGCAACACACAT 59.257 42.857 0.00 0.00 0.00 3.21
231 232 1.160989 ACACAAGAACGCAACACACA 58.839 45.000 0.00 0.00 0.00 3.72
232 233 3.242608 ACATACACAAGAACGCAACACAC 60.243 43.478 0.00 0.00 0.00 3.82
233 234 2.939756 ACATACACAAGAACGCAACACA 59.060 40.909 0.00 0.00 0.00 3.72
234 235 3.288242 CACATACACAAGAACGCAACAC 58.712 45.455 0.00 0.00 0.00 3.32
235 236 2.286713 GCACATACACAAGAACGCAACA 60.287 45.455 0.00 0.00 0.00 3.33
236 237 2.032030 AGCACATACACAAGAACGCAAC 60.032 45.455 0.00 0.00 0.00 4.17
237 238 2.032117 CAGCACATACACAAGAACGCAA 60.032 45.455 0.00 0.00 0.00 4.85
238 239 1.530720 CAGCACATACACAAGAACGCA 59.469 47.619 0.00 0.00 0.00 5.24
239 240 1.725931 GCAGCACATACACAAGAACGC 60.726 52.381 0.00 0.00 0.00 4.84
240 241 1.530720 TGCAGCACATACACAAGAACG 59.469 47.619 0.00 0.00 0.00 3.95
241 242 3.058016 ACATGCAGCACATACACAAGAAC 60.058 43.478 0.00 0.00 36.64 3.01
242 243 3.058085 CACATGCAGCACATACACAAGAA 60.058 43.478 0.00 0.00 36.64 2.52
243 244 2.485038 CACATGCAGCACATACACAAGA 59.515 45.455 0.00 0.00 36.64 3.02
244 245 2.227149 ACACATGCAGCACATACACAAG 59.773 45.455 0.00 0.00 36.64 3.16
245 246 2.030981 CACACATGCAGCACATACACAA 60.031 45.455 0.00 0.00 36.64 3.33
246 247 1.536331 CACACATGCAGCACATACACA 59.464 47.619 0.00 0.00 36.64 3.72
247 248 1.536766 ACACACATGCAGCACATACAC 59.463 47.619 0.00 0.00 36.64 2.90
248 249 1.536331 CACACACATGCAGCACATACA 59.464 47.619 0.00 0.00 36.64 2.29
249 250 1.730121 GCACACACATGCAGCACATAC 60.730 52.381 0.00 0.00 45.39 2.39
250 251 0.522626 GCACACACATGCAGCACATA 59.477 50.000 0.00 0.00 45.39 2.29
251 252 1.287815 GCACACACATGCAGCACAT 59.712 52.632 0.00 0.00 45.39 3.21
252 253 2.723116 GCACACACATGCAGCACA 59.277 55.556 0.00 0.00 45.39 4.57
258 259 1.503542 GGCAGTAGCACACACATGC 59.496 57.895 0.00 0.00 46.50 4.06
259 260 2.174334 GGGCAGTAGCACACACATG 58.826 57.895 0.00 0.00 45.91 3.21
260 261 4.722193 GGGCAGTAGCACACACAT 57.278 55.556 0.00 0.00 45.91 3.21
266 267 0.830648 TCAGTATGGGGCAGTAGCAC 59.169 55.000 0.00 0.00 45.89 4.40
267 268 1.417517 CATCAGTATGGGGCAGTAGCA 59.582 52.381 0.00 0.00 38.86 3.49
268 269 1.417890 ACATCAGTATGGGGCAGTAGC 59.582 52.381 0.00 0.00 37.43 3.58
269 270 3.118261 ACAACATCAGTATGGGGCAGTAG 60.118 47.826 0.00 0.00 37.43 2.57
270 271 2.843730 ACAACATCAGTATGGGGCAGTA 59.156 45.455 0.00 0.00 37.43 2.74
271 272 1.635487 ACAACATCAGTATGGGGCAGT 59.365 47.619 0.00 0.00 37.43 4.40
272 273 2.019249 CACAACATCAGTATGGGGCAG 58.981 52.381 0.00 0.00 37.43 4.85
273 274 1.354031 ACACAACATCAGTATGGGGCA 59.646 47.619 0.00 0.00 37.43 5.36
274 275 1.745087 CACACAACATCAGTATGGGGC 59.255 52.381 0.00 0.00 37.43 5.80
275 276 2.749076 CACACACAACATCAGTATGGGG 59.251 50.000 0.00 0.00 37.43 4.96
276 277 3.673902 TCACACACAACATCAGTATGGG 58.326 45.455 0.00 0.00 37.43 4.00
277 278 3.125829 GCTCACACACAACATCAGTATGG 59.874 47.826 0.00 0.00 37.43 2.74
278 279 3.999001 AGCTCACACACAACATCAGTATG 59.001 43.478 0.00 0.00 39.17 2.39
279 280 4.277515 AGCTCACACACAACATCAGTAT 57.722 40.909 0.00 0.00 0.00 2.12
280 281 3.751479 AGCTCACACACAACATCAGTA 57.249 42.857 0.00 0.00 0.00 2.74
281 282 2.627515 AGCTCACACACAACATCAGT 57.372 45.000 0.00 0.00 0.00 3.41
282 283 3.431233 CAGTAGCTCACACACAACATCAG 59.569 47.826 0.00 0.00 0.00 2.90
283 284 3.181466 ACAGTAGCTCACACACAACATCA 60.181 43.478 0.00 0.00 0.00 3.07
284 285 3.393800 ACAGTAGCTCACACACAACATC 58.606 45.455 0.00 0.00 0.00 3.06
285 286 3.070159 AGACAGTAGCTCACACACAACAT 59.930 43.478 0.00 0.00 0.00 2.71
286 287 2.430694 AGACAGTAGCTCACACACAACA 59.569 45.455 0.00 0.00 0.00 3.33
287 288 3.053455 GAGACAGTAGCTCACACACAAC 58.947 50.000 0.00 0.00 32.67 3.32
288 289 2.287608 CGAGACAGTAGCTCACACACAA 60.288 50.000 0.00 0.00 32.67 3.33
289 290 1.266989 CGAGACAGTAGCTCACACACA 59.733 52.381 0.00 0.00 32.67 3.72
290 291 1.970447 CGAGACAGTAGCTCACACAC 58.030 55.000 0.00 0.00 32.67 3.82
291 292 0.241213 GCGAGACAGTAGCTCACACA 59.759 55.000 0.00 0.00 32.67 3.72
292 293 0.241213 TGCGAGACAGTAGCTCACAC 59.759 55.000 0.00 0.00 32.67 3.82
293 294 0.241213 GTGCGAGACAGTAGCTCACA 59.759 55.000 0.00 0.00 32.67 3.58
294 295 0.241213 TGTGCGAGACAGTAGCTCAC 59.759 55.000 0.00 0.00 32.67 3.51
295 296 0.241213 GTGTGCGAGACAGTAGCTCA 59.759 55.000 0.00 0.00 34.28 4.26
296 297 0.241213 TGTGTGCGAGACAGTAGCTC 59.759 55.000 0.00 0.00 34.28 4.09
297 298 0.039074 GTGTGTGCGAGACAGTAGCT 60.039 55.000 0.00 0.00 34.28 3.32
298 299 0.318699 TGTGTGTGCGAGACAGTAGC 60.319 55.000 0.00 0.00 34.28 3.58
299 300 1.988467 CATGTGTGTGCGAGACAGTAG 59.012 52.381 0.00 0.00 34.28 2.57
300 301 1.611491 TCATGTGTGTGCGAGACAGTA 59.389 47.619 0.00 0.00 34.28 2.74
301 302 0.389025 TCATGTGTGTGCGAGACAGT 59.611 50.000 0.00 0.00 34.28 3.55
302 303 1.458445 CTTCATGTGTGTGCGAGACAG 59.542 52.381 0.00 0.00 34.28 3.51
303 304 1.501169 CTTCATGTGTGTGCGAGACA 58.499 50.000 0.00 0.00 31.20 3.41
304 305 0.792640 CCTTCATGTGTGTGCGAGAC 59.207 55.000 0.00 0.00 0.00 3.36
305 306 0.320683 CCCTTCATGTGTGTGCGAGA 60.321 55.000 0.00 0.00 0.00 4.04
306 307 1.915614 GCCCTTCATGTGTGTGCGAG 61.916 60.000 0.00 0.00 0.00 5.03
307 308 1.965930 GCCCTTCATGTGTGTGCGA 60.966 57.895 0.00 0.00 0.00 5.10
308 309 1.794151 TTGCCCTTCATGTGTGTGCG 61.794 55.000 0.00 0.00 0.00 5.34
309 310 0.388659 TTTGCCCTTCATGTGTGTGC 59.611 50.000 0.00 0.00 0.00 4.57
310 311 2.546373 CCTTTTGCCCTTCATGTGTGTG 60.546 50.000 0.00 0.00 0.00 3.82
311 312 1.688197 CCTTTTGCCCTTCATGTGTGT 59.312 47.619 0.00 0.00 0.00 3.72
312 313 1.001181 CCCTTTTGCCCTTCATGTGTG 59.999 52.381 0.00 0.00 0.00 3.82
313 314 1.341080 CCCTTTTGCCCTTCATGTGT 58.659 50.000 0.00 0.00 0.00 3.72
314 315 1.273327 GACCCTTTTGCCCTTCATGTG 59.727 52.381 0.00 0.00 0.00 3.21
315 316 1.147817 AGACCCTTTTGCCCTTCATGT 59.852 47.619 0.00 0.00 0.00 3.21
316 317 1.928868 AGACCCTTTTGCCCTTCATG 58.071 50.000 0.00 0.00 0.00 3.07
317 318 2.702270 AAGACCCTTTTGCCCTTCAT 57.298 45.000 0.00 0.00 0.00 2.57
318 319 2.470057 AAAGACCCTTTTGCCCTTCA 57.530 45.000 0.00 0.00 0.00 3.02
319 320 2.698274 TGAAAAGACCCTTTTGCCCTTC 59.302 45.455 9.14 0.00 0.00 3.46
320 321 2.700371 CTGAAAAGACCCTTTTGCCCTT 59.300 45.455 9.14 0.00 0.00 3.95
321 322 2.319844 CTGAAAAGACCCTTTTGCCCT 58.680 47.619 9.14 0.00 0.00 5.19
322 323 1.344438 CCTGAAAAGACCCTTTTGCCC 59.656 52.381 9.14 0.00 0.00 5.36
323 324 2.039418 ACCTGAAAAGACCCTTTTGCC 58.961 47.619 9.14 0.00 0.00 4.52
324 325 2.430694 ACACCTGAAAAGACCCTTTTGC 59.569 45.455 9.14 3.16 0.00 3.68
325 326 3.699038 TGACACCTGAAAAGACCCTTTTG 59.301 43.478 9.14 0.00 0.00 2.44
326 327 3.976015 TGACACCTGAAAAGACCCTTTT 58.024 40.909 4.55 4.55 0.00 2.27
327 328 3.662759 TGACACCTGAAAAGACCCTTT 57.337 42.857 0.00 0.00 0.00 3.11
328 329 3.884037 ATGACACCTGAAAAGACCCTT 57.116 42.857 0.00 0.00 0.00 3.95
329 330 3.884037 AATGACACCTGAAAAGACCCT 57.116 42.857 0.00 0.00 0.00 4.34
330 331 5.070685 ACTAAATGACACCTGAAAAGACCC 58.929 41.667 0.00 0.00 0.00 4.46
331 332 5.998363 AGACTAAATGACACCTGAAAAGACC 59.002 40.000 0.00 0.00 0.00 3.85
332 333 7.497925 AAGACTAAATGACACCTGAAAAGAC 57.502 36.000 0.00 0.00 0.00 3.01
333 334 9.621629 TTTAAGACTAAATGACACCTGAAAAGA 57.378 29.630 0.00 0.00 0.00 2.52
337 338 8.792633 CCATTTTAAGACTAAATGACACCTGAA 58.207 33.333 10.90 0.00 42.72 3.02
338 339 8.160765 TCCATTTTAAGACTAAATGACACCTGA 58.839 33.333 10.90 0.00 42.72 3.86
339 340 8.237267 GTCCATTTTAAGACTAAATGACACCTG 58.763 37.037 10.90 0.00 42.72 4.00
340 341 7.119262 CGTCCATTTTAAGACTAAATGACACCT 59.881 37.037 10.90 0.00 42.72 4.00
341 342 7.118680 TCGTCCATTTTAAGACTAAATGACACC 59.881 37.037 10.90 0.00 42.72 4.16
342 343 8.025243 TCGTCCATTTTAAGACTAAATGACAC 57.975 34.615 10.90 7.18 42.72 3.67
343 344 8.610248 TTCGTCCATTTTAAGACTAAATGACA 57.390 30.769 10.90 0.00 42.72 3.58
344 345 9.887406 TTTTCGTCCATTTTAAGACTAAATGAC 57.113 29.630 10.90 7.34 42.72 3.06
347 348 9.353999 GCATTTTCGTCCATTTTAAGACTAAAT 57.646 29.630 0.00 0.00 30.63 1.40
348 349 7.810759 GGCATTTTCGTCCATTTTAAGACTAAA 59.189 33.333 0.00 0.00 0.00 1.85
349 350 7.040340 TGGCATTTTCGTCCATTTTAAGACTAA 60.040 33.333 0.00 0.00 0.00 2.24
350 351 6.431543 TGGCATTTTCGTCCATTTTAAGACTA 59.568 34.615 0.00 0.00 0.00 2.59
351 352 5.242838 TGGCATTTTCGTCCATTTTAAGACT 59.757 36.000 0.00 0.00 0.00 3.24
352 353 5.465935 TGGCATTTTCGTCCATTTTAAGAC 58.534 37.500 0.00 0.00 0.00 3.01
353 354 5.713792 TGGCATTTTCGTCCATTTTAAGA 57.286 34.783 0.00 0.00 0.00 2.10
354 355 8.472683 TTTATGGCATTTTCGTCCATTTTAAG 57.527 30.769 4.78 0.00 40.71 1.85
355 356 7.547370 CCTTTATGGCATTTTCGTCCATTTTAA 59.453 33.333 4.78 0.00 40.71 1.52
356 357 7.038659 CCTTTATGGCATTTTCGTCCATTTTA 58.961 34.615 4.78 0.00 40.71 1.52
357 358 5.874261 CCTTTATGGCATTTTCGTCCATTTT 59.126 36.000 4.78 0.00 40.71 1.82
358 359 5.418676 CCTTTATGGCATTTTCGTCCATTT 58.581 37.500 4.78 0.00 40.71 2.32
359 360 4.141959 CCCTTTATGGCATTTTCGTCCATT 60.142 41.667 4.78 0.00 40.71 3.16
360 361 3.384467 CCCTTTATGGCATTTTCGTCCAT 59.616 43.478 4.78 0.00 42.70 3.41
361 362 2.757868 CCCTTTATGGCATTTTCGTCCA 59.242 45.455 4.78 0.00 0.00 4.02
362 363 3.436700 CCCTTTATGGCATTTTCGTCC 57.563 47.619 4.78 0.00 0.00 4.79
373 374 6.935167 AGTCTAAAATTTGTGCCCTTTATGG 58.065 36.000 0.00 0.00 0.00 2.74
374 375 6.747280 CGAGTCTAAAATTTGTGCCCTTTATG 59.253 38.462 0.00 0.00 0.00 1.90
375 376 6.433093 ACGAGTCTAAAATTTGTGCCCTTTAT 59.567 34.615 0.00 0.00 0.00 1.40
376 377 5.766174 ACGAGTCTAAAATTTGTGCCCTTTA 59.234 36.000 0.00 0.00 0.00 1.85
377 378 4.583073 ACGAGTCTAAAATTTGTGCCCTTT 59.417 37.500 0.00 0.00 0.00 3.11
378 379 4.142038 ACGAGTCTAAAATTTGTGCCCTT 58.858 39.130 0.00 0.00 0.00 3.95
379 380 3.751518 ACGAGTCTAAAATTTGTGCCCT 58.248 40.909 0.00 0.00 0.00 5.19
380 381 4.226761 CAACGAGTCTAAAATTTGTGCCC 58.773 43.478 0.00 0.00 0.00 5.36
381 382 4.855531 ACAACGAGTCTAAAATTTGTGCC 58.144 39.130 0.00 0.00 0.00 5.01
382 383 7.349711 TCTAACAACGAGTCTAAAATTTGTGC 58.650 34.615 0.00 0.00 0.00 4.57
386 387 9.379791 CCCTATCTAACAACGAGTCTAAAATTT 57.620 33.333 0.00 0.00 0.00 1.82
387 388 8.755977 TCCCTATCTAACAACGAGTCTAAAATT 58.244 33.333 0.00 0.00 0.00 1.82
388 389 8.302515 TCCCTATCTAACAACGAGTCTAAAAT 57.697 34.615 0.00 0.00 0.00 1.82
389 390 7.707624 TCCCTATCTAACAACGAGTCTAAAA 57.292 36.000 0.00 0.00 0.00 1.52
390 391 7.707624 TTCCCTATCTAACAACGAGTCTAAA 57.292 36.000 0.00 0.00 0.00 1.85
391 392 7.707624 TTTCCCTATCTAACAACGAGTCTAA 57.292 36.000 0.00 0.00 0.00 2.10
392 393 7.707624 TTTTCCCTATCTAACAACGAGTCTA 57.292 36.000 0.00 0.00 0.00 2.59
393 394 6.600882 TTTTCCCTATCTAACAACGAGTCT 57.399 37.500 0.00 0.00 0.00 3.24
418 419 8.512138 CGTTTCCCTATTTAACACTGAAAATCT 58.488 33.333 0.00 0.00 0.00 2.40
419 420 8.508875 TCGTTTCCCTATTTAACACTGAAAATC 58.491 33.333 0.00 0.00 0.00 2.17
420 421 8.398878 TCGTTTCCCTATTTAACACTGAAAAT 57.601 30.769 0.00 0.00 0.00 1.82
421 422 7.804843 TCGTTTCCCTATTTAACACTGAAAA 57.195 32.000 0.00 0.00 0.00 2.29
422 423 7.804843 TTCGTTTCCCTATTTAACACTGAAA 57.195 32.000 0.00 0.00 0.00 2.69
423 424 7.804843 TTTCGTTTCCCTATTTAACACTGAA 57.195 32.000 0.00 0.00 0.00 3.02
424 425 7.989416 ATTTCGTTTCCCTATTTAACACTGA 57.011 32.000 0.00 0.00 0.00 3.41
432 433 9.031537 ACCATCTTAAATTTCGTTTCCCTATTT 57.968 29.630 0.00 0.00 0.00 1.40
433 434 8.466798 CACCATCTTAAATTTCGTTTCCCTATT 58.533 33.333 0.00 0.00 0.00 1.73
434 435 7.614192 ACACCATCTTAAATTTCGTTTCCCTAT 59.386 33.333 0.00 0.00 0.00 2.57
435 436 6.943718 ACACCATCTTAAATTTCGTTTCCCTA 59.056 34.615 0.00 0.00 0.00 3.53
436 437 5.773176 ACACCATCTTAAATTTCGTTTCCCT 59.227 36.000 0.00 0.00 0.00 4.20
437 438 6.020971 ACACCATCTTAAATTTCGTTTCCC 57.979 37.500 0.00 0.00 0.00 3.97
451 452 9.975218 AAACAACTCCTTATATAACACCATCTT 57.025 29.630 0.00 0.00 0.00 2.40
452 453 9.614792 GAAACAACTCCTTATATAACACCATCT 57.385 33.333 0.00 0.00 0.00 2.90
453 454 9.614792 AGAAACAACTCCTTATATAACACCATC 57.385 33.333 0.00 0.00 0.00 3.51
454 455 9.975218 AAGAAACAACTCCTTATATAACACCAT 57.025 29.630 0.00 0.00 0.00 3.55
455 456 9.802039 AAAGAAACAACTCCTTATATAACACCA 57.198 29.630 0.00 0.00 0.00 4.17
464 465 7.608376 GCTTAGAGGAAAGAAACAACTCCTTAT 59.392 37.037 0.00 0.00 38.45 1.73
465 466 6.935208 GCTTAGAGGAAAGAAACAACTCCTTA 59.065 38.462 0.00 0.00 38.45 2.69
466 467 5.765677 GCTTAGAGGAAAGAAACAACTCCTT 59.234 40.000 0.00 0.00 38.45 3.36
467 468 5.163195 TGCTTAGAGGAAAGAAACAACTCCT 60.163 40.000 0.00 0.00 41.11 3.69
468 469 5.063880 TGCTTAGAGGAAAGAAACAACTCC 58.936 41.667 0.00 0.00 0.00 3.85
469 470 5.992217 TCTGCTTAGAGGAAAGAAACAACTC 59.008 40.000 0.00 0.00 0.00 3.01
470 471 5.930135 TCTGCTTAGAGGAAAGAAACAACT 58.070 37.500 0.00 0.00 0.00 3.16
471 472 6.809630 ATCTGCTTAGAGGAAAGAAACAAC 57.190 37.500 0.00 0.00 0.00 3.32
472 473 8.157476 AGTAATCTGCTTAGAGGAAAGAAACAA 58.843 33.333 0.00 0.00 0.00 2.83
473 474 7.680730 AGTAATCTGCTTAGAGGAAAGAAACA 58.319 34.615 0.00 0.00 0.00 2.83
474 475 8.038351 AGAGTAATCTGCTTAGAGGAAAGAAAC 58.962 37.037 0.00 0.00 0.00 2.78
475 476 8.140112 AGAGTAATCTGCTTAGAGGAAAGAAA 57.860 34.615 0.00 0.00 0.00 2.52
476 477 7.726033 AGAGTAATCTGCTTAGAGGAAAGAA 57.274 36.000 0.00 0.00 0.00 2.52
477 478 7.551585 CAAGAGTAATCTGCTTAGAGGAAAGA 58.448 38.462 0.00 0.00 0.00 2.52
478 479 6.257630 GCAAGAGTAATCTGCTTAGAGGAAAG 59.742 42.308 0.00 0.00 0.00 2.62
479 480 6.109359 GCAAGAGTAATCTGCTTAGAGGAAA 58.891 40.000 0.00 0.00 0.00 3.13
480 481 5.395768 GGCAAGAGTAATCTGCTTAGAGGAA 60.396 44.000 12.17 0.00 0.00 3.36
488 489 0.462759 GGCGGCAAGAGTAATCTGCT 60.463 55.000 3.07 0.00 0.00 4.24
552 554 1.537202 GAACCAGACCAGCATGACAAC 59.463 52.381 0.00 0.00 39.69 3.32
575 577 2.159268 GGACTAGGAAAGTGTAGTCGCC 60.159 54.545 0.00 0.00 44.18 5.54
607 609 6.237915 GGTCTCTTTTGTTCTTGCAAAATGTG 60.238 38.462 0.00 0.00 44.25 3.21
656 658 0.446222 ACACTGCACGTTGTTGTGTC 59.554 50.000 7.33 0.00 41.94 3.67
720 722 2.223876 ACAGTCTCGTTCGGTTTTGCTA 60.224 45.455 0.00 0.00 0.00 3.49
737 739 5.811399 TTTTTGTCGATTCAAGTCACAGT 57.189 34.783 0.00 0.00 0.00 3.55
764 766 1.592669 CCCGCTATGGAAGTCGCTG 60.593 63.158 0.00 0.00 42.00 5.18
787 789 2.620115 CGCTGTTCCGTATAGGTTAGGA 59.380 50.000 0.00 0.00 41.99 2.94
836 848 3.876589 TTGACCCCGAGCAAGACGC 62.877 63.158 0.00 0.00 42.91 5.19
837 849 1.738099 CTTGACCCCGAGCAAGACG 60.738 63.158 0.00 0.00 43.11 4.18
838 850 2.035442 GCTTGACCCCGAGCAAGAC 61.035 63.158 0.00 0.00 46.73 3.01
839 851 2.347490 GCTTGACCCCGAGCAAGA 59.653 61.111 0.00 0.00 46.73 3.02
1142 1160 2.716017 GGGACTGTGGCGAGAGAGG 61.716 68.421 0.00 0.00 0.00 3.69
1410 1443 1.384783 TGGTGGTAGTGGTGGTGGT 60.385 57.895 0.00 0.00 0.00 4.16
1411 1444 1.072505 GTGGTGGTAGTGGTGGTGG 59.927 63.158 0.00 0.00 0.00 4.61
1686 1736 4.215399 CGTTCATGGCTTCTTCCTTTACAA 59.785 41.667 0.00 0.00 0.00 2.41
1999 2059 7.599998 GCACCACAGAAATAATTTGAATCACTT 59.400 33.333 0.00 0.00 0.00 3.16
2233 2297 8.592998 CAGATACAAAGAAATACGGTACAAGAC 58.407 37.037 0.00 0.00 0.00 3.01
2242 2341 6.408858 ACAGTGCAGATACAAAGAAATACG 57.591 37.500 0.00 0.00 0.00 3.06
2463 2565 2.158623 ACATGCCCTTTCAACTGACTCA 60.159 45.455 0.00 0.00 0.00 3.41
2533 2635 9.569122 GGTCCAAATAACTATGCTCCTTATTTA 57.431 33.333 0.00 0.00 31.72 1.40
2554 2656 7.300556 TCAGATTCAAAAATCATTTGGTCCA 57.699 32.000 0.00 0.00 43.21 4.02
2558 2660 9.005777 ACCATTTCAGATTCAAAAATCATTTGG 57.994 29.630 1.52 0.00 43.21 3.28
2589 2691 3.883489 CTCACATGCATGACCAATGATCT 59.117 43.478 32.75 3.33 38.72 2.75
2614 2716 2.743636 TGTAACTACTGACCAGCTGC 57.256 50.000 8.66 0.00 0.00 5.25
2618 2720 5.794894 AGGACAAATGTAACTACTGACCAG 58.205 41.667 0.00 0.00 0.00 4.00
2635 2740 6.041409 TGTCCAAGATGCAAATTTTAGGACAA 59.959 34.615 17.55 6.95 46.94 3.18
2901 3006 5.454897 GGAGCGGAGGGAGTAGAATTTAATT 60.455 44.000 0.00 0.00 0.00 1.40
2937 3043 5.836358 AGGGTTGCCTTAGTTCAAAATTACA 59.164 36.000 0.00 0.00 0.00 2.41
2941 3047 6.590234 CTAAGGGTTGCCTTAGTTCAAAAT 57.410 37.500 1.61 0.00 42.32 1.82
2951 3057 4.099419 CAGTTTTGAACTAAGGGTTGCCTT 59.901 41.667 0.00 0.00 40.46 4.35
2988 3095 6.217074 TGATATATAAGTACTCCCTCCGGTCT 59.783 42.308 0.00 0.00 0.00 3.85
2991 3098 7.899648 ATTGATATATAAGTACTCCCTCCGG 57.100 40.000 0.00 0.00 0.00 5.14
3019 3127 2.015587 GGGGTTGTTGTCGTTGTTGTA 58.984 47.619 0.00 0.00 0.00 2.41
3020 3128 0.812549 GGGGTTGTTGTCGTTGTTGT 59.187 50.000 0.00 0.00 0.00 3.32
3021 3129 0.101579 GGGGGTTGTTGTCGTTGTTG 59.898 55.000 0.00 0.00 0.00 3.33
3022 3130 0.033894 AGGGGGTTGTTGTCGTTGTT 60.034 50.000 0.00 0.00 0.00 2.83
3023 3131 0.464916 GAGGGGGTTGTTGTCGTTGT 60.465 55.000 0.00 0.00 0.00 3.32
3024 3132 1.503818 CGAGGGGGTTGTTGTCGTTG 61.504 60.000 0.00 0.00 0.00 4.10
3025 3133 1.227734 CGAGGGGGTTGTTGTCGTT 60.228 57.895 0.00 0.00 0.00 3.85
3026 3134 2.424302 CGAGGGGGTTGTTGTCGT 59.576 61.111 0.00 0.00 0.00 4.34
3027 3135 2.358247 CCGAGGGGGTTGTTGTCG 60.358 66.667 0.00 0.00 0.00 4.35
3028 3136 0.037734 ATTCCGAGGGGGTTGTTGTC 59.962 55.000 0.00 0.00 37.00 3.18
3042 3150 2.029020 TGATGAAGATCCCGCTATTCCG 60.029 50.000 0.00 0.00 0.00 4.30
3079 3189 8.171196 CAGAAGATCATGTGTACATTGTACAAC 58.829 37.037 26.73 20.66 33.61 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.