Multiple sequence alignment - TraesCS2D01G310200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G310200 chr2D 100.000 6584 0 0 1 6584 398462080 398468663 0.000000e+00 12159.0
1 TraesCS2D01G310200 chr2D 100.000 60 0 0 6494 6553 398468511 398468570 1.940000e-20 111.0
2 TraesCS2D01G310200 chr2D 100.000 60 0 0 6432 6491 398468573 398468632 1.940000e-20 111.0
3 TraesCS2D01G310200 chr2A 97.123 3441 62 11 174 3587 535710146 535713576 0.000000e+00 5771.0
4 TraesCS2D01G310200 chr2A 96.353 2029 45 10 3586 5586 535713888 535715915 0.000000e+00 3310.0
5 TraesCS2D01G310200 chr2A 97.876 565 7 5 5631 6191 535715886 535716449 0.000000e+00 972.0
6 TraesCS2D01G310200 chr2A 89.542 306 22 7 6190 6492 535731049 535731347 4.820000e-101 379.0
7 TraesCS2D01G310200 chr2B 94.475 1991 94 8 1784 3761 471445625 471443638 0.000000e+00 3053.0
8 TraesCS2D01G310200 chr2B 92.018 1140 56 16 3721 4829 471443638 471442503 0.000000e+00 1568.0
9 TraesCS2D01G310200 chr2B 85.307 1368 116 32 369 1683 471447042 471445707 0.000000e+00 1334.0
10 TraesCS2D01G310200 chr2B 90.698 817 42 12 4827 5624 471442416 471441615 0.000000e+00 1057.0
11 TraesCS2D01G310200 chr2B 97.561 123 3 0 264 386 471458585 471458463 1.860000e-50 211.0
12 TraesCS2D01G310200 chr2B 84.932 219 16 6 5710 5916 471441554 471441341 8.650000e-49 206.0
13 TraesCS2D01G310200 chr2B 95.935 123 5 0 264 386 471447183 471447061 4.030000e-47 200.0
14 TraesCS2D01G310200 chr2B 96.970 33 1 0 5631 5663 471441682 471441650 1.000000e-03 56.5
15 TraesCS2D01G310200 chr6A 80.038 1047 175 25 2419 3455 319207277 319206255 0.000000e+00 745.0
16 TraesCS2D01G310200 chr6A 74.436 532 101 21 5075 5581 319202149 319201628 5.210000e-46 196.0
17 TraesCS2D01G310200 chr6B 79.771 1048 176 27 2419 3455 376299916 376298894 0.000000e+00 728.0
18 TraesCS2D01G310200 chr6B 74.060 532 103 19 5075 5581 376293407 376292886 1.130000e-42 185.0
19 TraesCS2D01G310200 chr6D 79.656 1047 179 25 2419 3455 239048750 239047728 0.000000e+00 723.0
20 TraesCS2D01G310200 chr6D 74.812 532 99 21 5075 5581 239044221 239043700 2.410000e-49 207.0
21 TraesCS2D01G310200 chr7B 79.247 983 164 28 2486 3455 530662812 530663767 0.000000e+00 649.0
22 TraesCS2D01G310200 chr7B 93.305 239 16 0 3516 3754 92035112 92034874 2.920000e-93 353.0
23 TraesCS2D01G310200 chr7B 95.385 195 8 1 1 194 621350324 621350518 6.410000e-80 309.0
24 TraesCS2D01G310200 chr7B 77.626 219 29 14 6223 6436 503442005 503441802 1.500000e-21 115.0
25 TraesCS2D01G310200 chr7A 89.107 459 36 8 3453 3910 717606737 717607182 5.770000e-155 558.0
26 TraesCS2D01G310200 chr1B 96.373 193 7 0 1 193 644209 644017 1.070000e-82 318.0
27 TraesCS2D01G310200 chr7D 95.897 195 6 2 1 193 599692245 599692051 1.380000e-81 315.0
28 TraesCS2D01G310200 chr7D 95.312 192 8 1 1 191 574912718 574912527 2.980000e-78 303.0
29 TraesCS2D01G310200 chr7D 94.388 196 10 1 1 195 8872681 8872486 3.860000e-77 300.0
30 TraesCS2D01G310200 chr5D 95.833 192 7 1 1 191 331539220 331539029 6.410000e-80 309.0
31 TraesCS2D01G310200 chr5D 90.769 65 4 2 6223 6286 43214574 43214637 1.180000e-12 86.1
32 TraesCS2D01G310200 chr5D 100.000 30 0 0 1697 1726 6172904 6172875 1.000000e-03 56.5
33 TraesCS2D01G310200 chr5B 95.812 191 7 1 2 191 609897954 609898144 2.310000e-79 307.0
34 TraesCS2D01G310200 chr4B 95.789 190 7 1 1 189 52585563 52585752 8.290000e-79 305.0
35 TraesCS2D01G310200 chr4B 100.000 30 0 0 1697 1726 308675738 308675709 1.000000e-03 56.5
36 TraesCS2D01G310200 chr4B 100.000 30 0 0 1697 1726 613911676 613911647 1.000000e-03 56.5
37 TraesCS2D01G310200 chr1D 94.819 193 9 1 1 192 387055937 387055745 3.860000e-77 300.0
38 TraesCS2D01G310200 chr1D 100.000 30 0 0 1697 1726 51867913 51867884 1.000000e-03 56.5
39 TraesCS2D01G310200 chr1D 100.000 30 0 0 1697 1726 254439063 254439092 1.000000e-03 56.5
40 TraesCS2D01G310200 chr1D 100.000 30 0 0 1697 1726 491424904 491424875 1.000000e-03 56.5
41 TraesCS2D01G310200 chr4A 86.957 69 5 4 6220 6286 574771667 574771601 2.550000e-09 75.0
42 TraesCS2D01G310200 chr4A 92.500 40 2 1 6227 6265 170112312 170112273 1.000000e-03 56.5
43 TraesCS2D01G310200 chr3A 86.765 68 5 4 6221 6286 224963139 224963204 9.160000e-09 73.1
44 TraesCS2D01G310200 chrUn 100.000 30 0 0 1697 1726 425346119 425346090 1.000000e-03 56.5
45 TraesCS2D01G310200 chr4D 100.000 30 0 0 1697 1726 19872538 19872567 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G310200 chr2D 398462080 398468663 6583 False 4127.000000 12159 100.000000 1 6584 3 chr2D.!!$F1 6583
1 TraesCS2D01G310200 chr2A 535710146 535716449 6303 False 3351.000000 5771 97.117333 174 6191 3 chr2A.!!$F2 6017
2 TraesCS2D01G310200 chr2B 471441341 471447183 5842 True 1067.785714 3053 91.476429 264 5916 7 chr2B.!!$R2 5652
3 TraesCS2D01G310200 chr6A 319206255 319207277 1022 True 745.000000 745 80.038000 2419 3455 1 chr6A.!!$R2 1036
4 TraesCS2D01G310200 chr6B 376298894 376299916 1022 True 728.000000 728 79.771000 2419 3455 1 chr6B.!!$R2 1036
5 TraesCS2D01G310200 chr6D 239043700 239048750 5050 True 465.000000 723 77.234000 2419 5581 2 chr6D.!!$R1 3162
6 TraesCS2D01G310200 chr7B 530662812 530663767 955 False 649.000000 649 79.247000 2486 3455 1 chr7B.!!$F1 969

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
57 58 0.033208 GACAGGATGGGGCAAATGGA 60.033 55.000 0.00 0.0 43.62 3.41 F
155 156 0.391130 CAGAATCCGGACAAAGCGGA 60.391 55.000 6.12 0.0 36.17 5.54 F
156 157 0.391263 AGAATCCGGACAAAGCGGAC 60.391 55.000 6.12 0.0 34.41 4.79 F
856 934 0.464735 TTTGTGTGCCGGTTGCTAGT 60.465 50.000 1.90 0.0 42.00 2.57 F
1987 2122 4.072131 TCTAAGGTGTGCATCCTTTGTTC 58.928 43.478 24.15 0.0 41.86 3.18 F
3483 3641 3.609853 TCTACATGCCCTGTTGATTCAC 58.390 45.455 0.00 0.0 39.39 3.18 F
5415 8775 2.179589 GCAGCAGCAAACATGAATACG 58.820 47.619 0.00 0.0 41.58 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1801 1936 1.055040 AGCAGATGAGATAGGTGCCC 58.945 55.000 0.00 0.0 34.56 5.36 R
1907 2042 7.831691 TGGTCAACCAAGATAAAATTCTTCA 57.168 32.000 0.00 0.0 44.35 3.02 R
1987 2122 9.840427 AATAAATCAAAGTGAACGATACAAAGG 57.160 29.630 0.00 0.0 0.00 3.11 R
2207 2344 7.433708 AACATGTGTCGACTGATCATAAAAA 57.566 32.000 17.92 0.0 0.00 1.94 R
3695 4173 3.041946 CCCTGACTAGGCCTGATAAGTT 58.958 50.000 17.99 0.0 43.16 2.66 R
5448 8835 1.006805 GGGAGCACGATCATCCTCG 60.007 63.158 0.00 0.0 44.14 4.63 R
6547 9973 0.037326 GCGTGTGATGACCTTCCTCA 60.037 55.000 0.00 0.0 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.485825 GCATTTAAAACGTTGCTTTTGTTTT 57.514 28.000 0.00 7.37 45.04 2.43
25 26 7.933560 GCATTTAAAACGTTGCTTTTGTTTTT 58.066 26.923 0.00 0.00 41.58 1.94
43 44 4.932268 TTTTTAAATAGACGCGGACAGG 57.068 40.909 12.47 0.00 0.00 4.00
44 45 3.872511 TTTAAATAGACGCGGACAGGA 57.127 42.857 12.47 0.00 0.00 3.86
45 46 4.395959 TTTAAATAGACGCGGACAGGAT 57.604 40.909 12.47 0.00 0.00 3.24
46 47 2.225068 AAATAGACGCGGACAGGATG 57.775 50.000 12.47 0.00 46.00 3.51
47 48 0.389391 AATAGACGCGGACAGGATGG 59.611 55.000 12.47 0.00 43.62 3.51
48 49 1.464376 ATAGACGCGGACAGGATGGG 61.464 60.000 12.47 0.00 43.62 4.00
49 50 4.530857 GACGCGGACAGGATGGGG 62.531 72.222 12.47 0.00 43.62 4.96
52 53 4.424711 GCGGACAGGATGGGGCAA 62.425 66.667 0.00 0.00 43.62 4.52
53 54 2.354729 CGGACAGGATGGGGCAAA 59.645 61.111 0.00 0.00 43.62 3.68
54 55 1.076777 CGGACAGGATGGGGCAAAT 60.077 57.895 0.00 0.00 43.62 2.32
55 56 1.386525 CGGACAGGATGGGGCAAATG 61.387 60.000 0.00 0.00 43.62 2.32
56 57 1.044790 GGACAGGATGGGGCAAATGG 61.045 60.000 0.00 0.00 43.62 3.16
57 58 0.033208 GACAGGATGGGGCAAATGGA 60.033 55.000 0.00 0.00 43.62 3.41
58 59 0.638292 ACAGGATGGGGCAAATGGAT 59.362 50.000 0.00 0.00 43.62 3.41
59 60 1.045407 CAGGATGGGGCAAATGGATG 58.955 55.000 0.00 0.00 0.00 3.51
60 61 0.761702 AGGATGGGGCAAATGGATGC 60.762 55.000 0.00 0.00 45.67 3.91
67 68 4.910722 CAAATGGATGCGGCCGCG 62.911 66.667 41.73 23.24 45.51 6.46
99 100 3.716195 CCACCGCATCCCAGGACA 61.716 66.667 0.00 0.00 0.00 4.02
100 101 2.436646 CACCGCATCCCAGGACAC 60.437 66.667 0.00 0.00 0.00 3.67
101 102 4.082523 ACCGCATCCCAGGACACG 62.083 66.667 3.74 3.74 0.00 4.49
105 106 4.838152 CATCCCAGGACACGCCCG 62.838 72.222 0.00 0.00 37.37 6.13
119 120 3.943691 CCCGGACACGACCCCAAA 61.944 66.667 0.73 0.00 44.60 3.28
120 121 2.349755 CCGGACACGACCCCAAAT 59.650 61.111 0.00 0.00 44.60 2.32
121 122 1.743995 CCGGACACGACCCCAAATC 60.744 63.158 0.00 0.00 44.60 2.17
122 123 1.743995 CGGACACGACCCCAAATCC 60.744 63.158 0.00 0.00 44.60 3.01
123 124 1.378119 GGACACGACCCCAAATCCC 60.378 63.158 0.00 0.00 0.00 3.85
124 125 1.683441 GACACGACCCCAAATCCCT 59.317 57.895 0.00 0.00 0.00 4.20
125 126 0.906775 GACACGACCCCAAATCCCTA 59.093 55.000 0.00 0.00 0.00 3.53
126 127 1.489230 GACACGACCCCAAATCCCTAT 59.511 52.381 0.00 0.00 0.00 2.57
127 128 1.489230 ACACGACCCCAAATCCCTATC 59.511 52.381 0.00 0.00 0.00 2.08
128 129 1.137697 ACGACCCCAAATCCCTATCC 58.862 55.000 0.00 0.00 0.00 2.59
129 130 1.136828 CGACCCCAAATCCCTATCCA 58.863 55.000 0.00 0.00 0.00 3.41
130 131 1.493022 CGACCCCAAATCCCTATCCAA 59.507 52.381 0.00 0.00 0.00 3.53
131 132 2.092103 CGACCCCAAATCCCTATCCAAA 60.092 50.000 0.00 0.00 0.00 3.28
132 133 3.296854 GACCCCAAATCCCTATCCAAAC 58.703 50.000 0.00 0.00 0.00 2.93
133 134 2.306847 CCCCAAATCCCTATCCAAACG 58.693 52.381 0.00 0.00 0.00 3.60
134 135 2.306847 CCCAAATCCCTATCCAAACGG 58.693 52.381 0.00 0.00 0.00 4.44
135 136 2.092103 CCCAAATCCCTATCCAAACGGA 60.092 50.000 0.00 0.00 36.85 4.69
136 137 2.949644 CCAAATCCCTATCCAAACGGAC 59.050 50.000 0.00 0.00 34.62 4.79
137 138 3.616219 CAAATCCCTATCCAAACGGACA 58.384 45.455 0.00 0.00 34.62 4.02
138 139 3.560636 AATCCCTATCCAAACGGACAG 57.439 47.619 0.00 0.00 34.62 3.51
139 140 2.241281 TCCCTATCCAAACGGACAGA 57.759 50.000 0.00 0.00 34.62 3.41
140 141 2.542550 TCCCTATCCAAACGGACAGAA 58.457 47.619 0.00 0.00 34.62 3.02
141 142 3.112263 TCCCTATCCAAACGGACAGAAT 58.888 45.455 0.00 0.00 34.62 2.40
142 143 3.134081 TCCCTATCCAAACGGACAGAATC 59.866 47.826 0.00 0.00 34.62 2.52
143 144 3.467803 CCTATCCAAACGGACAGAATCC 58.532 50.000 0.00 0.00 45.20 3.01
152 153 1.087501 GGACAGAATCCGGACAAAGC 58.912 55.000 6.12 0.00 37.88 3.51
153 154 0.721718 GACAGAATCCGGACAAAGCG 59.278 55.000 6.12 0.00 0.00 4.68
154 155 0.673644 ACAGAATCCGGACAAAGCGG 60.674 55.000 6.12 0.00 0.00 5.52
155 156 0.391130 CAGAATCCGGACAAAGCGGA 60.391 55.000 6.12 0.00 36.17 5.54
156 157 0.391263 AGAATCCGGACAAAGCGGAC 60.391 55.000 6.12 0.00 34.41 4.79
157 158 1.693083 GAATCCGGACAAAGCGGACG 61.693 60.000 6.12 0.00 34.41 4.79
158 159 2.444700 AATCCGGACAAAGCGGACGT 62.445 55.000 6.12 0.00 34.41 4.34
159 160 2.830704 ATCCGGACAAAGCGGACGTC 62.831 60.000 6.12 7.13 34.41 4.34
160 161 3.110178 CGGACAAAGCGGACGTCC 61.110 66.667 25.28 25.28 44.79 4.79
170 171 2.357881 GGACGTCCGTTTGGGGTC 60.358 66.667 20.85 0.00 37.97 4.46
171 172 2.735857 GACGTCCGTTTGGGGTCG 60.736 66.667 3.51 0.00 38.68 4.79
172 173 4.974989 ACGTCCGTTTGGGGTCGC 62.975 66.667 0.00 0.00 37.16 5.19
227 228 7.640313 TCTTCTTCCTACTCCATTCTACAGTA 58.360 38.462 0.00 0.00 0.00 2.74
260 261 2.540565 CCACAGACGATCTCATCAGACG 60.541 54.545 0.00 0.00 32.60 4.18
261 262 2.352960 CACAGACGATCTCATCAGACGA 59.647 50.000 0.00 0.00 31.52 4.20
262 263 2.353269 ACAGACGATCTCATCAGACGAC 59.647 50.000 0.00 0.00 31.52 4.34
329 332 3.431415 CCCATCATCGACTACCCTATCA 58.569 50.000 0.00 0.00 0.00 2.15
446 485 3.414700 GTCAGTGACAAGCGCGGG 61.415 66.667 18.54 0.00 32.09 6.13
541 592 2.598787 CCTCCAACCTACCCGCCAA 61.599 63.158 0.00 0.00 0.00 4.52
724 778 6.464892 CCACACATAGATCTCTCTCTCTCTCT 60.465 46.154 0.00 0.00 32.66 3.10
728 782 4.696479 AGATCTCTCTCTCTCTCTGTCC 57.304 50.000 0.00 0.00 0.00 4.02
838 916 3.698765 CCCCCGCAGCAGATTTTT 58.301 55.556 0.00 0.00 0.00 1.94
856 934 0.464735 TTTGTGTGCCGGTTGCTAGT 60.465 50.000 1.90 0.00 42.00 2.57
915 993 6.140110 CGATTCAAGGTGTTGATTTTTACGT 58.860 36.000 0.00 0.00 42.41 3.57
916 994 6.635239 CGATTCAAGGTGTTGATTTTTACGTT 59.365 34.615 0.00 0.00 42.41 3.99
924 1002 6.091034 GGTGTTGATTTTTACGTTGTTTTGGT 59.909 34.615 0.00 0.00 0.00 3.67
1234 1330 6.238593 GCTTAAACTCAGATGCCATTAAGAGG 60.239 42.308 7.14 0.00 34.06 3.69
1235 1331 5.441718 AAACTCAGATGCCATTAAGAGGA 57.558 39.130 1.10 0.00 0.00 3.71
1236 1332 4.686191 ACTCAGATGCCATTAAGAGGAG 57.314 45.455 1.10 0.00 0.00 3.69
1635 1745 6.428771 TGGTTGGTAGTGTTTAAGATTGCTAC 59.571 38.462 0.00 0.00 0.00 3.58
1761 1873 5.306937 TGGACTAGGACTCAAATTGACAGAA 59.693 40.000 0.00 0.00 0.00 3.02
1907 2042 8.742777 ACTATGTGACACATGCTTAATTTCATT 58.257 29.630 27.66 2.86 39.53 2.57
1987 2122 4.072131 TCTAAGGTGTGCATCCTTTGTTC 58.928 43.478 24.15 0.00 41.86 3.18
2207 2344 6.015688 CCTGTTGATATATTCATTTGGCTGCT 60.016 38.462 0.00 0.00 33.34 4.24
2927 3068 8.762645 AGATCACAGAGGAGAATGTATGTTTTA 58.237 33.333 0.00 0.00 0.00 1.52
3483 3641 3.609853 TCTACATGCCCTGTTGATTCAC 58.390 45.455 0.00 0.00 39.39 3.18
3695 4173 4.157246 TCTTGCCTGGAGTAGTCTGTTAA 58.843 43.478 0.00 0.00 0.00 2.01
4159 4688 3.912496 TGAAGGAATCCGATGACACAT 57.088 42.857 0.00 0.00 0.00 3.21
4166 4695 6.692486 AGGAATCCGATGACACATTCTATAC 58.308 40.000 0.00 0.00 0.00 1.47
4189 4718 2.952310 GCCCCTTACTCCAATTGTGATC 59.048 50.000 4.43 0.00 0.00 2.92
5289 8649 3.048602 CGGTCACAGGAGAACCGT 58.951 61.111 5.06 0.00 41.83 4.83
5414 8774 2.533266 GGCAGCAGCAAACATGAATAC 58.467 47.619 2.65 0.00 44.61 1.89
5415 8775 2.179589 GCAGCAGCAAACATGAATACG 58.820 47.619 0.00 0.00 41.58 3.06
5431 8815 5.698104 TGAATACGTACATCCCTTCTCCTA 58.302 41.667 0.00 0.00 0.00 2.94
5441 8828 3.330198 TCCCTTCTCCTATACCGACCTA 58.670 50.000 0.00 0.00 0.00 3.08
5448 8835 5.128919 TCTCCTATACCGACCTACAACTTC 58.871 45.833 0.00 0.00 0.00 3.01
5593 8980 3.173965 CTGGATGATTAGGGGATACGGT 58.826 50.000 0.00 0.00 37.60 4.83
5597 8984 4.202430 GGATGATTAGGGGATACGGTTGTT 60.202 45.833 0.00 0.00 37.60 2.83
5606 8993 3.306919 GGGATACGGTTGTTGGTAAGACA 60.307 47.826 0.00 0.00 37.60 3.41
5614 9001 5.620429 CGGTTGTTGGTAAGACACTTGTTTT 60.620 40.000 0.00 0.00 0.00 2.43
5624 9011 5.720261 AGACACTTGTTTTTCTCGTCTTC 57.280 39.130 0.00 0.00 0.00 2.87
5625 9012 5.175859 AGACACTTGTTTTTCTCGTCTTCA 58.824 37.500 0.00 0.00 0.00 3.02
5627 9014 5.628134 ACACTTGTTTTTCTCGTCTTCAAC 58.372 37.500 0.00 0.00 0.00 3.18
5638 9025 1.789506 GTCTTCAACGAAGCTCAGCT 58.210 50.000 0.00 0.00 42.56 4.24
5658 9045 3.529533 CTTGTTGAGCTGGATGACTAGG 58.470 50.000 0.00 0.00 0.00 3.02
5841 9263 5.580297 ACAACTGTGCAAACTTATTTGTTGG 59.420 36.000 7.56 0.00 45.97 3.77
5847 9269 6.700960 TGTGCAAACTTATTTGTTGGAGATTG 59.299 34.615 0.00 0.00 45.97 2.67
5951 9376 3.103911 CACGGTCAGGACGTTCGC 61.104 66.667 0.00 0.00 43.58 4.70
6081 9507 2.689983 GGCCTTCACCATTTACCATCTG 59.310 50.000 0.00 0.00 0.00 2.90
6191 9617 4.873746 TTTCTCTTCACGATCTGTCCTT 57.126 40.909 0.00 0.00 0.00 3.36
6192 9618 5.977489 TTTCTCTTCACGATCTGTCCTTA 57.023 39.130 0.00 0.00 0.00 2.69
6193 9619 4.966965 TCTCTTCACGATCTGTCCTTAC 57.033 45.455 0.00 0.00 0.00 2.34
6194 9620 4.590918 TCTCTTCACGATCTGTCCTTACT 58.409 43.478 0.00 0.00 0.00 2.24
6195 9621 5.010933 TCTCTTCACGATCTGTCCTTACTT 58.989 41.667 0.00 0.00 0.00 2.24
6196 9622 5.124138 TCTCTTCACGATCTGTCCTTACTTC 59.876 44.000 0.00 0.00 0.00 3.01
6197 9623 4.158025 TCTTCACGATCTGTCCTTACTTCC 59.842 45.833 0.00 0.00 0.00 3.46
6198 9624 2.758979 TCACGATCTGTCCTTACTTCCC 59.241 50.000 0.00 0.00 0.00 3.97
6199 9625 2.108970 ACGATCTGTCCTTACTTCCCC 58.891 52.381 0.00 0.00 0.00 4.81
6200 9626 2.108168 CGATCTGTCCTTACTTCCCCA 58.892 52.381 0.00 0.00 0.00 4.96
6201 9627 2.500098 CGATCTGTCCTTACTTCCCCAA 59.500 50.000 0.00 0.00 0.00 4.12
6202 9628 3.430929 CGATCTGTCCTTACTTCCCCAAG 60.431 52.174 0.00 0.00 35.50 3.61
6203 9629 1.628846 TCTGTCCTTACTTCCCCAAGC 59.371 52.381 0.00 0.00 32.09 4.01
6204 9630 1.351017 CTGTCCTTACTTCCCCAAGCA 59.649 52.381 0.00 0.00 32.09 3.91
6205 9631 1.777878 TGTCCTTACTTCCCCAAGCAA 59.222 47.619 0.00 0.00 32.09 3.91
6206 9632 2.175931 TGTCCTTACTTCCCCAAGCAAA 59.824 45.455 0.00 0.00 32.09 3.68
6207 9633 2.557056 GTCCTTACTTCCCCAAGCAAAC 59.443 50.000 0.00 0.00 32.09 2.93
6208 9634 1.893137 CCTTACTTCCCCAAGCAAACC 59.107 52.381 0.00 0.00 32.09 3.27
6209 9635 2.593026 CTTACTTCCCCAAGCAAACCA 58.407 47.619 0.00 0.00 32.09 3.67
6210 9636 2.990740 TACTTCCCCAAGCAAACCAT 57.009 45.000 0.00 0.00 32.09 3.55
6211 9637 1.341080 ACTTCCCCAAGCAAACCATG 58.659 50.000 0.00 0.00 32.09 3.66
6212 9638 0.609662 CTTCCCCAAGCAAACCATGG 59.390 55.000 11.19 11.19 0.00 3.66
6213 9639 1.479368 TTCCCCAAGCAAACCATGGC 61.479 55.000 13.04 0.00 32.71 4.40
6214 9640 2.664398 CCCAAGCAAACCATGGCC 59.336 61.111 13.04 0.00 32.71 5.36
6215 9641 1.914764 CCCAAGCAAACCATGGCCT 60.915 57.895 13.04 0.00 32.71 5.19
6216 9642 1.294138 CCAAGCAAACCATGGCCTG 59.706 57.895 13.04 10.60 0.00 4.85
6217 9643 1.375013 CAAGCAAACCATGGCCTGC 60.375 57.895 24.57 24.57 34.96 4.85
6218 9644 1.534717 AAGCAAACCATGGCCTGCT 60.535 52.632 27.55 27.55 46.85 4.24
6219 9645 1.534717 AGCAAACCATGGCCTGCTT 60.535 52.632 27.55 16.04 42.37 3.91
6220 9646 0.251742 AGCAAACCATGGCCTGCTTA 60.252 50.000 27.55 0.00 42.37 3.09
6221 9647 0.607620 GCAAACCATGGCCTGCTTAA 59.392 50.000 24.64 0.00 0.00 1.85
6222 9648 1.207811 GCAAACCATGGCCTGCTTAAT 59.792 47.619 24.64 0.00 0.00 1.40
6223 9649 2.355007 GCAAACCATGGCCTGCTTAATT 60.355 45.455 24.64 2.44 0.00 1.40
6224 9650 3.869526 GCAAACCATGGCCTGCTTAATTT 60.870 43.478 24.64 8.08 0.00 1.82
6225 9651 4.622695 GCAAACCATGGCCTGCTTAATTTA 60.623 41.667 24.64 0.00 0.00 1.40
6226 9652 5.673514 CAAACCATGGCCTGCTTAATTTAT 58.326 37.500 13.04 0.00 0.00 1.40
6227 9653 5.955961 AACCATGGCCTGCTTAATTTATT 57.044 34.783 13.04 0.00 0.00 1.40
6228 9654 5.955961 ACCATGGCCTGCTTAATTTATTT 57.044 34.783 13.04 0.00 0.00 1.40
6229 9655 6.312141 ACCATGGCCTGCTTAATTTATTTT 57.688 33.333 13.04 0.00 0.00 1.82
6230 9656 6.720309 ACCATGGCCTGCTTAATTTATTTTT 58.280 32.000 13.04 0.00 0.00 1.94
6289 9715 8.887264 AATAAGGAGAGAGAGAGAGTTTTACA 57.113 34.615 0.00 0.00 0.00 2.41
6290 9716 8.887264 ATAAGGAGAGAGAGAGAGTTTTACAA 57.113 34.615 0.00 0.00 0.00 2.41
6291 9717 6.834168 AGGAGAGAGAGAGAGTTTTACAAG 57.166 41.667 0.00 0.00 0.00 3.16
6292 9718 5.185056 AGGAGAGAGAGAGAGTTTTACAAGC 59.815 44.000 0.00 0.00 0.00 4.01
6293 9719 5.054390 AGAGAGAGAGAGTTTTACAAGCG 57.946 43.478 0.00 0.00 0.00 4.68
6294 9720 4.082463 AGAGAGAGAGAGTTTTACAAGCGG 60.082 45.833 0.00 0.00 0.00 5.52
6295 9721 2.668945 GAGAGAGAGTTTTACAAGCGGC 59.331 50.000 0.00 0.00 0.00 6.53
6296 9722 1.732809 GAGAGAGTTTTACAAGCGGCC 59.267 52.381 0.00 0.00 0.00 6.13
6297 9723 1.071699 AGAGAGTTTTACAAGCGGCCA 59.928 47.619 2.24 0.00 0.00 5.36
6298 9724 1.197036 GAGAGTTTTACAAGCGGCCAC 59.803 52.381 2.24 0.00 0.00 5.01
6299 9725 0.948678 GAGTTTTACAAGCGGCCACA 59.051 50.000 2.24 0.00 0.00 4.17
6300 9726 1.335496 GAGTTTTACAAGCGGCCACAA 59.665 47.619 2.24 0.00 0.00 3.33
6301 9727 1.960689 AGTTTTACAAGCGGCCACAAT 59.039 42.857 2.24 0.00 0.00 2.71
6302 9728 3.150767 AGTTTTACAAGCGGCCACAATA 58.849 40.909 2.24 0.00 0.00 1.90
6303 9729 3.190535 AGTTTTACAAGCGGCCACAATAG 59.809 43.478 2.24 0.00 0.00 1.73
6304 9730 1.091537 TTACAAGCGGCCACAATAGC 58.908 50.000 2.24 0.00 0.00 2.97
6305 9731 1.087202 TACAAGCGGCCACAATAGCG 61.087 55.000 2.24 0.00 34.34 4.26
6306 9732 2.824041 AAGCGGCCACAATAGCGG 60.824 61.111 2.24 0.00 34.34 5.52
6313 9739 2.779282 CCACAATAGCGGCATGACA 58.221 52.632 0.00 0.00 0.00 3.58
6314 9740 1.093972 CCACAATAGCGGCATGACAA 58.906 50.000 0.00 0.00 0.00 3.18
6315 9741 1.677576 CCACAATAGCGGCATGACAAT 59.322 47.619 0.00 0.00 0.00 2.71
6316 9742 2.099592 CCACAATAGCGGCATGACAATT 59.900 45.455 0.00 0.00 0.00 2.32
6317 9743 3.110358 CACAATAGCGGCATGACAATTG 58.890 45.455 13.88 13.88 0.00 2.32
6318 9744 2.121786 CAATAGCGGCATGACAATTGC 58.878 47.619 5.05 0.00 39.41 3.56
6319 9745 1.391577 ATAGCGGCATGACAATTGCA 58.608 45.000 5.05 5.18 41.95 4.08
6320 9746 1.391577 TAGCGGCATGACAATTGCAT 58.608 45.000 5.05 7.41 41.95 3.96
6321 9747 0.179121 AGCGGCATGACAATTGCATG 60.179 50.000 25.66 25.66 44.52 4.06
6322 9748 0.179132 GCGGCATGACAATTGCATGA 60.179 50.000 30.30 7.60 44.49 3.07
6323 9749 1.552226 CGGCATGACAATTGCATGAC 58.448 50.000 30.30 28.25 46.03 3.06
6326 9752 3.226346 GCATGACAATTGCATGACAGT 57.774 42.857 30.30 4.27 44.49 3.55
6327 9753 3.581755 GCATGACAATTGCATGACAGTT 58.418 40.909 30.30 3.64 44.49 3.16
6328 9754 4.735985 GCATGACAATTGCATGACAGTTA 58.264 39.130 30.30 2.26 44.49 2.24
6329 9755 4.560035 GCATGACAATTGCATGACAGTTAC 59.440 41.667 30.30 16.24 44.49 2.50
6330 9756 5.620654 GCATGACAATTGCATGACAGTTACT 60.621 40.000 30.30 2.37 44.49 2.24
6331 9757 5.611796 TGACAATTGCATGACAGTTACTC 57.388 39.130 5.05 0.00 0.00 2.59
6332 9758 5.062528 TGACAATTGCATGACAGTTACTCA 58.937 37.500 5.05 0.00 0.00 3.41
6333 9759 5.049474 TGACAATTGCATGACAGTTACTCAC 60.049 40.000 5.05 0.00 0.00 3.51
6334 9760 4.083855 ACAATTGCATGACAGTTACTCACG 60.084 41.667 5.05 0.00 0.00 4.35
6335 9761 2.812358 TGCATGACAGTTACTCACGT 57.188 45.000 0.00 0.00 0.00 4.49
6336 9762 2.403259 TGCATGACAGTTACTCACGTG 58.597 47.619 9.94 9.94 0.00 4.49
6337 9763 2.035321 TGCATGACAGTTACTCACGTGA 59.965 45.455 18.88 18.88 0.00 4.35
6338 9764 2.408704 GCATGACAGTTACTCACGTGAC 59.591 50.000 15.76 5.48 0.00 3.67
6339 9765 3.638484 CATGACAGTTACTCACGTGACA 58.362 45.455 15.76 8.96 32.49 3.58
6340 9766 4.237724 CATGACAGTTACTCACGTGACAT 58.762 43.478 15.76 11.00 32.49 3.06
6341 9767 5.399013 CATGACAGTTACTCACGTGACATA 58.601 41.667 15.76 7.43 32.49 2.29
6342 9768 5.441709 TGACAGTTACTCACGTGACATAA 57.558 39.130 15.76 13.24 32.49 1.90
6343 9769 6.020971 TGACAGTTACTCACGTGACATAAT 57.979 37.500 15.76 1.99 32.49 1.28
6344 9770 7.148355 TGACAGTTACTCACGTGACATAATA 57.852 36.000 15.76 0.00 32.49 0.98
6345 9771 7.595604 TGACAGTTACTCACGTGACATAATAA 58.404 34.615 15.76 5.85 32.49 1.40
6346 9772 7.753580 TGACAGTTACTCACGTGACATAATAAG 59.246 37.037 15.76 4.80 32.49 1.73
6347 9773 6.530534 ACAGTTACTCACGTGACATAATAAGC 59.469 38.462 15.76 4.90 32.49 3.09
6348 9774 6.019801 CAGTTACTCACGTGACATAATAAGCC 60.020 42.308 15.76 4.57 32.49 4.35
6349 9775 3.793559 ACTCACGTGACATAATAAGCCC 58.206 45.455 15.76 0.00 0.00 5.19
6350 9776 3.451178 ACTCACGTGACATAATAAGCCCT 59.549 43.478 15.76 0.00 0.00 5.19
6351 9777 4.647853 ACTCACGTGACATAATAAGCCCTA 59.352 41.667 15.76 0.00 0.00 3.53
6352 9778 5.196341 TCACGTGACATAATAAGCCCTAG 57.804 43.478 15.76 0.00 0.00 3.02
6353 9779 4.647853 TCACGTGACATAATAAGCCCTAGT 59.352 41.667 15.76 0.00 0.00 2.57
6354 9780 5.128171 TCACGTGACATAATAAGCCCTAGTT 59.872 40.000 15.76 0.00 0.00 2.24
6355 9781 5.462398 CACGTGACATAATAAGCCCTAGTTC 59.538 44.000 10.90 0.00 0.00 3.01
6356 9782 4.989168 CGTGACATAATAAGCCCTAGTTCC 59.011 45.833 0.00 0.00 0.00 3.62
6357 9783 5.221461 CGTGACATAATAAGCCCTAGTTCCT 60.221 44.000 0.00 0.00 0.00 3.36
6358 9784 6.592870 GTGACATAATAAGCCCTAGTTCCTT 58.407 40.000 0.00 0.00 0.00 3.36
6359 9785 7.470981 CGTGACATAATAAGCCCTAGTTCCTTA 60.471 40.741 0.00 0.00 0.00 2.69
6360 9786 7.873505 GTGACATAATAAGCCCTAGTTCCTTAG 59.126 40.741 0.00 0.00 0.00 2.18
6361 9787 6.770542 ACATAATAAGCCCTAGTTCCTTAGC 58.229 40.000 0.00 0.00 0.00 3.09
6362 9788 6.329197 ACATAATAAGCCCTAGTTCCTTAGCA 59.671 38.462 0.00 0.00 0.00 3.49
6363 9789 4.691326 ATAAGCCCTAGTTCCTTAGCAC 57.309 45.455 0.00 0.00 0.00 4.40
6364 9790 1.205055 AGCCCTAGTTCCTTAGCACC 58.795 55.000 0.00 0.00 0.00 5.01
6365 9791 0.180642 GCCCTAGTTCCTTAGCACCC 59.819 60.000 0.00 0.00 0.00 4.61
6366 9792 0.464452 CCCTAGTTCCTTAGCACCCG 59.536 60.000 0.00 0.00 0.00 5.28
6367 9793 0.179081 CCTAGTTCCTTAGCACCCGC 60.179 60.000 0.00 0.00 38.99 6.13
6368 9794 0.535335 CTAGTTCCTTAGCACCCGCA 59.465 55.000 0.00 0.00 42.27 5.69
6369 9795 0.535335 TAGTTCCTTAGCACCCGCAG 59.465 55.000 0.00 0.00 42.27 5.18
6370 9796 1.003718 GTTCCTTAGCACCCGCAGT 60.004 57.895 0.00 0.00 42.27 4.40
6371 9797 0.248289 GTTCCTTAGCACCCGCAGTA 59.752 55.000 0.00 0.00 42.27 2.74
6372 9798 0.978151 TTCCTTAGCACCCGCAGTAA 59.022 50.000 0.00 0.00 42.27 2.24
6373 9799 0.248289 TCCTTAGCACCCGCAGTAAC 59.752 55.000 0.00 0.00 42.27 2.50
6374 9800 0.743345 CCTTAGCACCCGCAGTAACC 60.743 60.000 0.00 0.00 42.27 2.85
6375 9801 0.743345 CTTAGCACCCGCAGTAACCC 60.743 60.000 0.00 0.00 42.27 4.11
6376 9802 1.481901 TTAGCACCCGCAGTAACCCA 61.482 55.000 0.00 0.00 42.27 4.51
6377 9803 1.481901 TAGCACCCGCAGTAACCCAA 61.482 55.000 0.00 0.00 42.27 4.12
6378 9804 1.899534 GCACCCGCAGTAACCCAAA 60.900 57.895 0.00 0.00 38.36 3.28
6379 9805 1.862602 GCACCCGCAGTAACCCAAAG 61.863 60.000 0.00 0.00 38.36 2.77
6380 9806 1.602605 ACCCGCAGTAACCCAAAGC 60.603 57.895 0.00 0.00 0.00 3.51
6381 9807 1.303317 CCCGCAGTAACCCAAAGCT 60.303 57.895 0.00 0.00 0.00 3.74
6382 9808 0.893727 CCCGCAGTAACCCAAAGCTT 60.894 55.000 0.00 0.00 0.00 3.74
6383 9809 0.521735 CCGCAGTAACCCAAAGCTTC 59.478 55.000 0.00 0.00 0.00 3.86
6384 9810 0.165944 CGCAGTAACCCAAAGCTTCG 59.834 55.000 0.00 0.00 0.00 3.79
6385 9811 0.109735 GCAGTAACCCAAAGCTTCGC 60.110 55.000 0.00 0.00 0.00 4.70
6386 9812 0.521735 CAGTAACCCAAAGCTTCGCC 59.478 55.000 0.00 0.00 0.00 5.54
6387 9813 0.400594 AGTAACCCAAAGCTTCGCCT 59.599 50.000 0.00 0.00 0.00 5.52
6388 9814 1.202891 AGTAACCCAAAGCTTCGCCTT 60.203 47.619 0.00 0.00 0.00 4.35
6389 9815 2.039348 AGTAACCCAAAGCTTCGCCTTA 59.961 45.455 0.00 0.00 0.00 2.69
6390 9816 2.215942 AACCCAAAGCTTCGCCTTAT 57.784 45.000 0.00 0.00 0.00 1.73
6391 9817 2.215942 ACCCAAAGCTTCGCCTTATT 57.784 45.000 0.00 0.00 0.00 1.40
6392 9818 1.818674 ACCCAAAGCTTCGCCTTATTG 59.181 47.619 0.00 0.00 0.00 1.90
6393 9819 2.091541 CCCAAAGCTTCGCCTTATTGA 58.908 47.619 0.00 0.00 0.00 2.57
6394 9820 2.689983 CCCAAAGCTTCGCCTTATTGAT 59.310 45.455 0.00 0.00 0.00 2.57
6395 9821 3.882888 CCCAAAGCTTCGCCTTATTGATA 59.117 43.478 0.00 0.00 0.00 2.15
6396 9822 4.338118 CCCAAAGCTTCGCCTTATTGATAA 59.662 41.667 0.00 0.00 0.00 1.75
6397 9823 5.010012 CCCAAAGCTTCGCCTTATTGATAAT 59.990 40.000 0.00 0.00 0.00 1.28
6398 9824 6.145535 CCAAAGCTTCGCCTTATTGATAATC 58.854 40.000 0.00 0.00 0.00 1.75
6399 9825 6.238731 CCAAAGCTTCGCCTTATTGATAATCA 60.239 38.462 0.00 0.00 0.00 2.57
6400 9826 7.365741 CAAAGCTTCGCCTTATTGATAATCAT 58.634 34.615 0.00 0.00 0.00 2.45
6401 9827 6.734104 AGCTTCGCCTTATTGATAATCATC 57.266 37.500 0.00 0.00 0.00 2.92
6402 9828 6.471146 AGCTTCGCCTTATTGATAATCATCT 58.529 36.000 0.00 0.00 31.93 2.90
6403 9829 6.370994 AGCTTCGCCTTATTGATAATCATCTG 59.629 38.462 0.00 0.00 31.93 2.90
6404 9830 6.486253 TTCGCCTTATTGATAATCATCTGC 57.514 37.500 0.00 0.00 31.93 4.26
6405 9831 5.550290 TCGCCTTATTGATAATCATCTGCA 58.450 37.500 0.00 0.00 31.93 4.41
6406 9832 5.640783 TCGCCTTATTGATAATCATCTGCAG 59.359 40.000 7.63 7.63 31.93 4.41
6407 9833 5.640783 CGCCTTATTGATAATCATCTGCAGA 59.359 40.000 20.79 20.79 31.93 4.26
6408 9834 6.148315 CGCCTTATTGATAATCATCTGCAGAA 59.852 38.462 22.50 5.35 31.93 3.02
6409 9835 7.528307 GCCTTATTGATAATCATCTGCAGAAG 58.472 38.462 22.50 17.35 31.93 2.85
6410 9836 7.389884 GCCTTATTGATAATCATCTGCAGAAGA 59.610 37.037 22.73 22.73 39.94 2.87
6411 9837 9.281371 CCTTATTGATAATCATCTGCAGAAGAA 57.719 33.333 24.08 10.48 38.79 2.52
6414 9840 7.417496 TTGATAATCATCTGCAGAAGAATCG 57.583 36.000 24.08 7.81 38.79 3.34
6415 9841 5.930569 TGATAATCATCTGCAGAAGAATCGG 59.069 40.000 24.08 7.13 38.79 4.18
6416 9842 3.834489 ATCATCTGCAGAAGAATCGGT 57.166 42.857 24.08 5.99 38.79 4.69
6417 9843 2.897436 TCATCTGCAGAAGAATCGGTG 58.103 47.619 22.50 11.88 38.79 4.94
6418 9844 1.938577 CATCTGCAGAAGAATCGGTGG 59.061 52.381 22.50 0.00 38.79 4.61
6419 9845 0.976641 TCTGCAGAAGAATCGGTGGT 59.023 50.000 15.67 0.00 29.54 4.16
6420 9846 1.081892 CTGCAGAAGAATCGGTGGTG 58.918 55.000 8.42 0.00 0.00 4.17
6421 9847 0.321564 TGCAGAAGAATCGGTGGTGG 60.322 55.000 0.00 0.00 0.00 4.61
6422 9848 0.321653 GCAGAAGAATCGGTGGTGGT 60.322 55.000 0.00 0.00 0.00 4.16
6423 9849 1.442769 CAGAAGAATCGGTGGTGGTG 58.557 55.000 0.00 0.00 0.00 4.17
6424 9850 0.321653 AGAAGAATCGGTGGTGGTGC 60.322 55.000 0.00 0.00 0.00 5.01
6425 9851 0.605319 GAAGAATCGGTGGTGGTGCA 60.605 55.000 0.00 0.00 0.00 4.57
6426 9852 0.889186 AAGAATCGGTGGTGGTGCAC 60.889 55.000 8.80 8.80 0.00 4.57
6427 9853 1.302511 GAATCGGTGGTGGTGCACT 60.303 57.895 17.98 0.00 34.40 4.40
6428 9854 1.298859 GAATCGGTGGTGGTGCACTC 61.299 60.000 17.98 10.23 34.40 3.51
6429 9855 1.768684 AATCGGTGGTGGTGCACTCT 61.769 55.000 17.98 0.00 34.40 3.24
6430 9856 1.768684 ATCGGTGGTGGTGCACTCTT 61.769 55.000 17.98 0.00 34.40 2.85
6431 9857 2.253758 CGGTGGTGGTGCACTCTTG 61.254 63.158 17.98 0.00 34.40 3.02
6432 9858 1.152963 GGTGGTGGTGCACTCTTGT 60.153 57.895 17.98 0.00 34.40 3.16
6433 9859 1.447317 GGTGGTGGTGCACTCTTGTG 61.447 60.000 17.98 0.00 46.37 3.33
6434 9860 1.152984 TGGTGGTGCACTCTTGTGG 60.153 57.895 17.98 0.00 43.97 4.17
6435 9861 2.555547 GGTGGTGCACTCTTGTGGC 61.556 63.158 17.98 0.00 43.97 5.01
6436 9862 1.823470 GTGGTGCACTCTTGTGGCA 60.823 57.895 17.98 0.00 43.97 4.92
6437 9863 1.077140 TGGTGCACTCTTGTGGCAA 60.077 52.632 17.98 0.00 43.97 4.52
6438 9864 0.682532 TGGTGCACTCTTGTGGCAAA 60.683 50.000 17.98 0.00 43.97 3.68
6439 9865 0.249031 GGTGCACTCTTGTGGCAAAC 60.249 55.000 17.98 0.00 43.97 2.93
6440 9866 0.455410 GTGCACTCTTGTGGCAAACA 59.545 50.000 10.32 0.00 43.97 2.83
6448 9874 3.655481 GTGGCAAACACTCGGGAG 58.345 61.111 0.00 0.00 46.72 4.30
6449 9875 1.227853 GTGGCAAACACTCGGGAGT 60.228 57.895 0.00 0.00 46.72 3.85
6450 9876 0.818040 GTGGCAAACACTCGGGAGTT 60.818 55.000 0.00 0.00 46.72 3.01
6451 9877 0.106918 TGGCAAACACTCGGGAGTTT 60.107 50.000 4.90 4.90 40.20 2.66
6452 9878 1.029681 GGCAAACACTCGGGAGTTTT 58.970 50.000 8.20 0.00 40.20 2.43
6453 9879 1.407618 GGCAAACACTCGGGAGTTTTT 59.592 47.619 8.20 7.04 40.69 1.94
6454 9880 2.543031 GGCAAACACTCGGGAGTTTTTC 60.543 50.000 8.20 3.80 38.74 2.29
6455 9881 2.357952 GCAAACACTCGGGAGTTTTTCT 59.642 45.455 8.20 0.00 38.74 2.52
6456 9882 3.548214 GCAAACACTCGGGAGTTTTTCTC 60.548 47.826 8.20 3.02 38.74 2.87
6462 9888 1.873698 CGGGAGTTTTTCTCGTTCCA 58.126 50.000 0.00 0.00 44.89 3.53
6463 9889 2.423577 CGGGAGTTTTTCTCGTTCCAT 58.576 47.619 0.00 0.00 44.89 3.41
6464 9890 3.592059 CGGGAGTTTTTCTCGTTCCATA 58.408 45.455 0.00 0.00 44.89 2.74
6465 9891 4.189231 CGGGAGTTTTTCTCGTTCCATAT 58.811 43.478 0.00 0.00 44.89 1.78
6466 9892 4.270325 CGGGAGTTTTTCTCGTTCCATATC 59.730 45.833 0.00 0.00 44.89 1.63
6467 9893 4.270325 GGGAGTTTTTCTCGTTCCATATCG 59.730 45.833 0.00 0.00 43.60 2.92
6468 9894 4.868734 GGAGTTTTTCTCGTTCCATATCGT 59.131 41.667 0.00 0.00 43.60 3.73
6469 9895 5.005490 GGAGTTTTTCTCGTTCCATATCGTC 59.995 44.000 0.00 0.00 43.60 4.20
6470 9896 4.868734 AGTTTTTCTCGTTCCATATCGTCC 59.131 41.667 0.00 0.00 0.00 4.79
6471 9897 4.459390 TTTTCTCGTTCCATATCGTCCA 57.541 40.909 0.00 0.00 0.00 4.02
6472 9898 4.459390 TTTCTCGTTCCATATCGTCCAA 57.541 40.909 0.00 0.00 0.00 3.53
6473 9899 3.710326 TCTCGTTCCATATCGTCCAAG 57.290 47.619 0.00 0.00 0.00 3.61
6474 9900 3.284617 TCTCGTTCCATATCGTCCAAGA 58.715 45.455 0.00 0.00 0.00 3.02
6475 9901 3.315470 TCTCGTTCCATATCGTCCAAGAG 59.685 47.826 0.00 0.00 0.00 2.85
6476 9902 3.284617 TCGTTCCATATCGTCCAAGAGA 58.715 45.455 0.00 0.00 0.00 3.10
6477 9903 3.066342 TCGTTCCATATCGTCCAAGAGAC 59.934 47.826 0.00 0.00 42.54 3.36
6478 9904 3.181490 CGTTCCATATCGTCCAAGAGACA 60.181 47.826 0.00 0.00 46.69 3.41
6479 9905 4.676986 CGTTCCATATCGTCCAAGAGACAA 60.677 45.833 0.00 0.00 46.69 3.18
6480 9906 4.386867 TCCATATCGTCCAAGAGACAAC 57.613 45.455 0.00 0.00 46.69 3.32
6481 9907 3.767131 TCCATATCGTCCAAGAGACAACA 59.233 43.478 0.00 0.00 46.69 3.33
6482 9908 4.405680 TCCATATCGTCCAAGAGACAACAT 59.594 41.667 0.00 0.00 46.69 2.71
6483 9909 4.509230 CCATATCGTCCAAGAGACAACATG 59.491 45.833 0.00 0.00 46.69 3.21
6484 9910 2.455674 TCGTCCAAGAGACAACATGG 57.544 50.000 0.00 0.00 46.69 3.66
6485 9911 1.691976 TCGTCCAAGAGACAACATGGT 59.308 47.619 0.00 0.00 46.69 3.55
6486 9912 1.800586 CGTCCAAGAGACAACATGGTG 59.199 52.381 9.83 9.83 46.69 4.17
6487 9913 2.547855 CGTCCAAGAGACAACATGGTGA 60.548 50.000 19.90 0.00 46.69 4.02
6488 9914 3.070018 GTCCAAGAGACAACATGGTGAG 58.930 50.000 19.90 0.00 45.55 3.51
6489 9915 2.038952 TCCAAGAGACAACATGGTGAGG 59.961 50.000 19.90 9.00 34.50 3.86
6490 9916 2.038952 CCAAGAGACAACATGGTGAGGA 59.961 50.000 19.90 0.00 0.00 3.71
6491 9917 3.332919 CAAGAGACAACATGGTGAGGAG 58.667 50.000 19.90 0.00 0.00 3.69
6492 9918 2.894731 AGAGACAACATGGTGAGGAGA 58.105 47.619 19.90 0.00 0.00 3.71
6493 9919 2.830923 AGAGACAACATGGTGAGGAGAG 59.169 50.000 19.90 0.00 0.00 3.20
6494 9920 2.564947 GAGACAACATGGTGAGGAGAGT 59.435 50.000 19.90 0.00 0.00 3.24
6495 9921 2.301296 AGACAACATGGTGAGGAGAGTG 59.699 50.000 19.90 0.00 0.00 3.51
6496 9922 1.349026 ACAACATGGTGAGGAGAGTGG 59.651 52.381 19.90 0.00 0.00 4.00
6497 9923 0.326264 AACATGGTGAGGAGAGTGGC 59.674 55.000 0.00 0.00 0.00 5.01
6498 9924 0.837691 ACATGGTGAGGAGAGTGGCA 60.838 55.000 0.00 0.00 0.00 4.92
6499 9925 0.325933 CATGGTGAGGAGAGTGGCAA 59.674 55.000 0.00 0.00 0.00 4.52
6500 9926 1.067295 ATGGTGAGGAGAGTGGCAAA 58.933 50.000 0.00 0.00 0.00 3.68
6501 9927 0.108585 TGGTGAGGAGAGTGGCAAAC 59.891 55.000 0.00 0.00 0.00 2.93
6502 9928 0.108585 GGTGAGGAGAGTGGCAAACA 59.891 55.000 0.00 0.00 0.00 2.83
6510 9936 3.655481 GTGGCAAACACTCGGGAG 58.345 61.111 0.00 0.00 46.72 4.30
6511 9937 1.227853 GTGGCAAACACTCGGGAGT 60.228 57.895 0.00 0.00 46.72 3.85
6512 9938 0.818040 GTGGCAAACACTCGGGAGTT 60.818 55.000 0.00 0.00 46.72 3.01
6513 9939 0.106918 TGGCAAACACTCGGGAGTTT 60.107 50.000 4.90 4.90 40.20 2.66
6514 9940 1.029681 GGCAAACACTCGGGAGTTTT 58.970 50.000 8.20 0.00 40.20 2.43
6515 9941 1.407618 GGCAAACACTCGGGAGTTTTT 59.592 47.619 8.20 7.04 40.69 1.94
6516 9942 2.543031 GGCAAACACTCGGGAGTTTTTC 60.543 50.000 8.20 3.80 38.74 2.29
6517 9943 2.357952 GCAAACACTCGGGAGTTTTTCT 59.642 45.455 8.20 0.00 38.74 2.52
6518 9944 3.548214 GCAAACACTCGGGAGTTTTTCTC 60.548 47.826 8.20 3.02 38.74 2.87
6524 9950 1.873698 CGGGAGTTTTTCTCGTTCCA 58.126 50.000 0.00 0.00 44.89 3.53
6525 9951 2.423577 CGGGAGTTTTTCTCGTTCCAT 58.576 47.619 0.00 0.00 44.89 3.41
6526 9952 3.592059 CGGGAGTTTTTCTCGTTCCATA 58.408 45.455 0.00 0.00 44.89 2.74
6527 9953 4.189231 CGGGAGTTTTTCTCGTTCCATAT 58.811 43.478 0.00 0.00 44.89 1.78
6528 9954 4.270325 CGGGAGTTTTTCTCGTTCCATATC 59.730 45.833 0.00 0.00 44.89 1.63
6529 9955 4.270325 GGGAGTTTTTCTCGTTCCATATCG 59.730 45.833 0.00 0.00 43.60 2.92
6530 9956 4.868734 GGAGTTTTTCTCGTTCCATATCGT 59.131 41.667 0.00 0.00 43.60 3.73
6531 9957 5.005490 GGAGTTTTTCTCGTTCCATATCGTC 59.995 44.000 0.00 0.00 43.60 4.20
6532 9958 4.868734 AGTTTTTCTCGTTCCATATCGTCC 59.131 41.667 0.00 0.00 0.00 4.79
6533 9959 4.459390 TTTTCTCGTTCCATATCGTCCA 57.541 40.909 0.00 0.00 0.00 4.02
6534 9960 4.459390 TTTCTCGTTCCATATCGTCCAA 57.541 40.909 0.00 0.00 0.00 3.53
6535 9961 3.710326 TCTCGTTCCATATCGTCCAAG 57.290 47.619 0.00 0.00 0.00 3.61
6536 9962 3.284617 TCTCGTTCCATATCGTCCAAGA 58.715 45.455 0.00 0.00 0.00 3.02
6537 9963 3.315470 TCTCGTTCCATATCGTCCAAGAG 59.685 47.826 0.00 0.00 0.00 2.85
6538 9964 3.284617 TCGTTCCATATCGTCCAAGAGA 58.715 45.455 0.00 0.00 0.00 3.10
6539 9965 3.066342 TCGTTCCATATCGTCCAAGAGAC 59.934 47.826 0.00 0.00 42.54 3.36
6540 9966 3.181490 CGTTCCATATCGTCCAAGAGACA 60.181 47.826 0.00 0.00 46.69 3.41
6541 9967 4.676986 CGTTCCATATCGTCCAAGAGACAA 60.677 45.833 0.00 0.00 46.69 3.18
6542 9968 4.386867 TCCATATCGTCCAAGAGACAAC 57.613 45.455 0.00 0.00 46.69 3.32
6543 9969 3.767131 TCCATATCGTCCAAGAGACAACA 59.233 43.478 0.00 0.00 46.69 3.33
6544 9970 4.405680 TCCATATCGTCCAAGAGACAACAT 59.594 41.667 0.00 0.00 46.69 2.71
6545 9971 4.509230 CCATATCGTCCAAGAGACAACATG 59.491 45.833 0.00 0.00 46.69 3.21
6546 9972 2.455674 TCGTCCAAGAGACAACATGG 57.544 50.000 0.00 0.00 46.69 3.66
6547 9973 1.691976 TCGTCCAAGAGACAACATGGT 59.308 47.619 0.00 0.00 46.69 3.55
6548 9974 1.800586 CGTCCAAGAGACAACATGGTG 59.199 52.381 9.83 9.83 46.69 4.17
6549 9975 2.547855 CGTCCAAGAGACAACATGGTGA 60.548 50.000 19.90 0.00 46.69 4.02
6550 9976 3.070018 GTCCAAGAGACAACATGGTGAG 58.930 50.000 19.90 0.00 45.55 3.51
6551 9977 2.038952 TCCAAGAGACAACATGGTGAGG 59.961 50.000 19.90 9.00 34.50 3.86
6552 9978 2.038952 CCAAGAGACAACATGGTGAGGA 59.961 50.000 19.90 0.00 0.00 3.71
6553 9979 3.496692 CCAAGAGACAACATGGTGAGGAA 60.497 47.826 19.90 0.00 0.00 3.36
6554 9980 3.692257 AGAGACAACATGGTGAGGAAG 57.308 47.619 19.90 0.00 0.00 3.46
6555 9981 2.304180 AGAGACAACATGGTGAGGAAGG 59.696 50.000 19.90 0.00 0.00 3.46
6556 9982 2.039084 GAGACAACATGGTGAGGAAGGT 59.961 50.000 19.90 0.00 0.00 3.50
6557 9983 2.039084 AGACAACATGGTGAGGAAGGTC 59.961 50.000 19.90 2.06 0.00 3.85
6558 9984 1.774254 ACAACATGGTGAGGAAGGTCA 59.226 47.619 19.90 0.00 0.00 4.02
6559 9985 2.376518 ACAACATGGTGAGGAAGGTCAT 59.623 45.455 19.90 0.00 0.00 3.06
6560 9986 3.012518 CAACATGGTGAGGAAGGTCATC 58.987 50.000 4.15 0.00 0.00 2.92
6561 9987 2.269023 ACATGGTGAGGAAGGTCATCA 58.731 47.619 0.00 0.00 41.80 3.07
6566 9992 0.037326 TGAGGAAGGTCATCACACGC 60.037 55.000 0.00 0.00 31.68 5.34
6567 9993 0.741221 GAGGAAGGTCATCACACGCC 60.741 60.000 0.00 0.00 0.00 5.68
6568 9994 1.194781 AGGAAGGTCATCACACGCCT 61.195 55.000 0.00 0.00 0.00 5.52
6569 9995 0.535335 GGAAGGTCATCACACGCCTA 59.465 55.000 0.00 0.00 0.00 3.93
6570 9996 1.139058 GGAAGGTCATCACACGCCTAT 59.861 52.381 0.00 0.00 0.00 2.57
6571 9997 2.420129 GGAAGGTCATCACACGCCTATT 60.420 50.000 0.00 0.00 0.00 1.73
6572 9998 3.270877 GAAGGTCATCACACGCCTATTT 58.729 45.455 0.00 0.00 0.00 1.40
6573 9999 2.632377 AGGTCATCACACGCCTATTTG 58.368 47.619 0.00 0.00 0.00 2.32
6574 10000 1.670811 GGTCATCACACGCCTATTTGG 59.329 52.381 0.00 0.00 39.35 3.28
6575 10001 1.670811 GTCATCACACGCCTATTTGGG 59.329 52.381 0.00 0.00 36.00 4.12
6576 10002 1.280710 TCATCACACGCCTATTTGGGT 59.719 47.619 0.00 0.00 36.00 4.51
6577 10003 2.091541 CATCACACGCCTATTTGGGTT 58.908 47.619 0.00 0.00 36.00 4.11
6578 10004 1.529226 TCACACGCCTATTTGGGTTG 58.471 50.000 0.00 0.00 36.00 3.77
6579 10005 1.202830 TCACACGCCTATTTGGGTTGT 60.203 47.619 0.00 0.00 36.00 3.32
6580 10006 1.068610 CACACGCCTATTTGGGTTGTG 60.069 52.381 6.13 6.13 39.22 3.33
6581 10007 0.109319 CACGCCTATTTGGGTTGTGC 60.109 55.000 0.00 0.00 36.00 4.57
6582 10008 0.538516 ACGCCTATTTGGGTTGTGCA 60.539 50.000 0.00 0.00 36.00 4.57
6583 10009 0.817013 CGCCTATTTGGGTTGTGCAT 59.183 50.000 0.00 0.00 36.00 3.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.567971 TCCTGTCCGCGTCTATTTAAAAA 58.432 39.130 4.92 0.00 0.00 1.94
23 24 4.191033 TCCTGTCCGCGTCTATTTAAAA 57.809 40.909 4.92 0.00 0.00 1.52
24 25 3.872511 TCCTGTCCGCGTCTATTTAAA 57.127 42.857 4.92 0.00 0.00 1.52
25 26 3.491964 CCATCCTGTCCGCGTCTATTTAA 60.492 47.826 4.92 0.00 0.00 1.52
26 27 2.035449 CCATCCTGTCCGCGTCTATTTA 59.965 50.000 4.92 0.00 0.00 1.40
27 28 1.202533 CCATCCTGTCCGCGTCTATTT 60.203 52.381 4.92 0.00 0.00 1.40
28 29 0.389391 CCATCCTGTCCGCGTCTATT 59.611 55.000 4.92 0.00 0.00 1.73
29 30 1.464376 CCCATCCTGTCCGCGTCTAT 61.464 60.000 4.92 0.00 0.00 1.98
30 31 2.125326 CCCATCCTGTCCGCGTCTA 61.125 63.158 4.92 0.00 0.00 2.59
31 32 3.461773 CCCATCCTGTCCGCGTCT 61.462 66.667 4.92 0.00 0.00 4.18
32 33 4.530857 CCCCATCCTGTCCGCGTC 62.531 72.222 4.92 0.00 0.00 5.19
35 36 3.936772 TTTGCCCCATCCTGTCCGC 62.937 63.158 0.00 0.00 0.00 5.54
36 37 1.076777 ATTTGCCCCATCCTGTCCG 60.077 57.895 0.00 0.00 0.00 4.79
37 38 1.044790 CCATTTGCCCCATCCTGTCC 61.045 60.000 0.00 0.00 0.00 4.02
38 39 0.033208 TCCATTTGCCCCATCCTGTC 60.033 55.000 0.00 0.00 0.00 3.51
39 40 0.638292 ATCCATTTGCCCCATCCTGT 59.362 50.000 0.00 0.00 0.00 4.00
40 41 1.045407 CATCCATTTGCCCCATCCTG 58.955 55.000 0.00 0.00 0.00 3.86
41 42 0.761702 GCATCCATTTGCCCCATCCT 60.762 55.000 0.00 0.00 36.60 3.24
42 43 1.750297 GCATCCATTTGCCCCATCC 59.250 57.895 0.00 0.00 36.60 3.51
43 44 1.364901 CGCATCCATTTGCCCCATC 59.635 57.895 0.00 0.00 39.52 3.51
44 45 2.135581 CCGCATCCATTTGCCCCAT 61.136 57.895 0.00 0.00 39.52 4.00
45 46 2.759149 CCGCATCCATTTGCCCCA 60.759 61.111 0.00 0.00 39.52 4.96
46 47 4.225703 GCCGCATCCATTTGCCCC 62.226 66.667 0.00 0.00 39.52 5.80
47 48 4.225703 GGCCGCATCCATTTGCCC 62.226 66.667 0.00 0.00 39.52 5.36
48 49 4.573950 CGGCCGCATCCATTTGCC 62.574 66.667 14.67 0.00 39.52 4.52
50 51 4.910722 CGCGGCCGCATCCATTTG 62.911 66.667 45.26 25.41 42.06 2.32
82 83 3.716195 TGTCCTGGGATGCGGTGG 61.716 66.667 0.00 0.00 0.00 4.61
83 84 2.436646 GTGTCCTGGGATGCGGTG 60.437 66.667 0.00 0.00 0.00 4.94
84 85 4.082523 CGTGTCCTGGGATGCGGT 62.083 66.667 0.00 0.00 0.00 5.68
88 89 4.838152 CGGGCGTGTCCTGGGATG 62.838 72.222 0.00 0.00 37.58 3.51
102 103 3.262448 ATTTGGGGTCGTGTCCGGG 62.262 63.158 0.00 0.00 33.95 5.73
103 104 1.743995 GATTTGGGGTCGTGTCCGG 60.744 63.158 0.00 0.00 33.95 5.14
104 105 1.743995 GGATTTGGGGTCGTGTCCG 60.744 63.158 0.00 0.00 0.00 4.79
105 106 1.378119 GGGATTTGGGGTCGTGTCC 60.378 63.158 0.00 0.00 0.00 4.02
106 107 0.906775 TAGGGATTTGGGGTCGTGTC 59.093 55.000 0.00 0.00 0.00 3.67
107 108 1.489230 GATAGGGATTTGGGGTCGTGT 59.511 52.381 0.00 0.00 0.00 4.49
108 109 1.202770 GGATAGGGATTTGGGGTCGTG 60.203 57.143 0.00 0.00 0.00 4.35
109 110 1.137697 GGATAGGGATTTGGGGTCGT 58.862 55.000 0.00 0.00 0.00 4.34
110 111 1.136828 TGGATAGGGATTTGGGGTCG 58.863 55.000 0.00 0.00 0.00 4.79
111 112 3.296854 GTTTGGATAGGGATTTGGGGTC 58.703 50.000 0.00 0.00 0.00 4.46
112 113 2.357777 CGTTTGGATAGGGATTTGGGGT 60.358 50.000 0.00 0.00 0.00 4.95
113 114 2.306847 CGTTTGGATAGGGATTTGGGG 58.693 52.381 0.00 0.00 0.00 4.96
114 115 2.092103 TCCGTTTGGATAGGGATTTGGG 60.092 50.000 0.00 0.00 40.17 4.12
115 116 3.290948 TCCGTTTGGATAGGGATTTGG 57.709 47.619 0.00 0.00 40.17 3.28
133 134 1.087501 GCTTTGTCCGGATTCTGTCC 58.912 55.000 7.81 0.00 44.10 4.02
134 135 0.721718 CGCTTTGTCCGGATTCTGTC 59.278 55.000 7.81 0.00 0.00 3.51
135 136 2.840974 CGCTTTGTCCGGATTCTGT 58.159 52.632 7.81 0.00 0.00 3.41
142 143 3.110178 GACGTCCGCTTTGTCCGG 61.110 66.667 3.51 0.00 46.88 5.14
143 144 3.110178 GGACGTCCGCTTTGTCCG 61.110 66.667 20.85 0.00 42.42 4.79
153 154 2.357881 GACCCCAAACGGACGTCC 60.358 66.667 25.28 25.28 0.00 4.79
154 155 2.735857 CGACCCCAAACGGACGTC 60.736 66.667 7.13 7.13 0.00 4.34
155 156 4.974989 GCGACCCCAAACGGACGT 62.975 66.667 0.00 0.00 34.99 4.34
172 173 3.599285 TTAGGCCAACTCCACCGCG 62.599 63.158 5.01 0.00 0.00 6.46
173 174 1.745489 CTTAGGCCAACTCCACCGC 60.745 63.158 5.01 0.00 0.00 5.68
174 175 1.078426 CCTTAGGCCAACTCCACCG 60.078 63.158 5.01 0.00 0.00 4.94
175 176 0.322546 CACCTTAGGCCAACTCCACC 60.323 60.000 5.01 0.00 0.00 4.61
176 177 0.960861 GCACCTTAGGCCAACTCCAC 60.961 60.000 5.01 0.00 0.00 4.02
177 178 1.378762 GCACCTTAGGCCAACTCCA 59.621 57.895 5.01 0.00 0.00 3.86
178 179 1.745489 CGCACCTTAGGCCAACTCC 60.745 63.158 5.01 0.00 0.00 3.85
179 180 0.248289 TACGCACCTTAGGCCAACTC 59.752 55.000 5.01 0.00 0.00 3.01
180 181 0.249398 CTACGCACCTTAGGCCAACT 59.751 55.000 5.01 0.00 0.00 3.16
181 182 1.366854 GCTACGCACCTTAGGCCAAC 61.367 60.000 5.01 0.00 0.00 3.77
182 183 1.078708 GCTACGCACCTTAGGCCAA 60.079 57.895 5.01 0.00 0.00 4.52
183 184 2.582436 GCTACGCACCTTAGGCCA 59.418 61.111 5.01 0.00 0.00 5.36
184 185 2.203029 GGCTACGCACCTTAGGCC 60.203 66.667 0.00 0.00 36.38 5.19
185 186 1.227292 GAGGCTACGCACCTTAGGC 60.227 63.158 0.00 0.00 41.37 3.93
186 187 0.824759 AAGAGGCTACGCACCTTAGG 59.175 55.000 0.00 0.00 37.77 2.69
187 188 1.751924 AGAAGAGGCTACGCACCTTAG 59.248 52.381 0.00 0.00 37.77 2.18
260 261 2.550978 CGTGGTCCATGGATGTTAGTC 58.449 52.381 19.62 2.35 0.00 2.59
261 262 1.209504 CCGTGGTCCATGGATGTTAGT 59.790 52.381 24.17 0.00 42.73 2.24
262 263 1.209504 ACCGTGGTCCATGGATGTTAG 59.790 52.381 33.12 9.94 42.73 2.34
329 332 1.202336 GGGCACTACGCTACAACGTAT 60.202 52.381 0.00 0.00 46.51 3.06
446 485 1.987704 TTGTGCACTGCCGTGTTCAC 61.988 55.000 19.41 10.40 43.16 3.18
541 592 1.302511 GACCGCATGTCAGTGGGTT 60.303 57.895 0.00 0.00 43.85 4.11
724 778 1.003580 CTAGAGGCAAAGCAAGGGACA 59.996 52.381 0.00 0.00 0.00 4.02
728 782 1.338200 ACGACTAGAGGCAAAGCAAGG 60.338 52.381 0.00 0.00 0.00 3.61
874 952 2.817396 GCAGAGACAAGGAGGCGC 60.817 66.667 0.00 0.00 0.00 6.53
915 993 7.224949 GGATTAAAAACAATCGGACCAAAACAA 59.775 33.333 0.00 0.00 36.04 2.83
916 994 6.702282 GGATTAAAAACAATCGGACCAAAACA 59.298 34.615 0.00 0.00 36.04 2.83
924 1002 2.424246 GCGGGGATTAAAAACAATCGGA 59.576 45.455 0.00 0.00 36.04 4.55
1144 1240 4.278310 GCCACCCTCACAAACCTATTAAT 58.722 43.478 0.00 0.00 0.00 1.40
1203 1299 5.907207 TGGCATCTGAGTTTAAGCTAGTAG 58.093 41.667 0.00 0.00 0.00 2.57
1234 1330 8.119226 GCCAATCATTAATTACGATAGCATCTC 58.881 37.037 0.00 0.00 42.67 2.75
1235 1331 7.066284 GGCCAATCATTAATTACGATAGCATCT 59.934 37.037 0.00 0.00 42.67 2.90
1236 1332 7.189512 GGCCAATCATTAATTACGATAGCATC 58.810 38.462 0.00 0.00 42.67 3.91
1635 1745 3.623060 CCGTGAATAACCCTCATCTTGTG 59.377 47.826 0.00 0.00 0.00 3.33
1796 1931 4.573900 CAGATGAGATAGGTGCCCATTAC 58.426 47.826 0.00 0.00 0.00 1.89
1801 1936 1.055040 AGCAGATGAGATAGGTGCCC 58.945 55.000 0.00 0.00 34.56 5.36
1907 2042 7.831691 TGGTCAACCAAGATAAAATTCTTCA 57.168 32.000 0.00 0.00 44.35 3.02
1987 2122 9.840427 AATAAATCAAAGTGAACGATACAAAGG 57.160 29.630 0.00 0.00 0.00 3.11
2207 2344 7.433708 AACATGTGTCGACTGATCATAAAAA 57.566 32.000 17.92 0.00 0.00 1.94
2927 3068 5.221641 TGGCACTAGATCAGTACAAAACACT 60.222 40.000 0.00 0.00 34.98 3.55
3695 4173 3.041946 CCCTGACTAGGCCTGATAAGTT 58.958 50.000 17.99 0.00 43.16 2.66
3798 4324 7.452189 TCATGGTATATGGTACGACCTCAAATA 59.548 37.037 0.00 0.00 39.58 1.40
3913 4439 4.679373 TGAGAGATGCCCAAGATTACTC 57.321 45.455 0.00 0.00 0.00 2.59
4159 4688 4.274794 TGGAGTAAGGGGCAGTATAGAA 57.725 45.455 0.00 0.00 0.00 2.10
4166 4695 2.094675 CACAATTGGAGTAAGGGGCAG 58.905 52.381 10.83 0.00 0.00 4.85
4529 5493 2.158971 AGGGTGCACCAAAAACATTCAC 60.159 45.455 35.78 14.64 43.89 3.18
4720 5689 8.424274 TGCATACTTCAGACACATTAATACAG 57.576 34.615 0.00 0.00 0.00 2.74
5289 8649 1.774254 AGGAAGTCATCAACACCACCA 59.226 47.619 0.00 0.00 0.00 4.17
5322 8682 3.996921 ATGTCATGGCTTCTCACTCTT 57.003 42.857 0.00 0.00 0.00 2.85
5414 8774 3.439476 CGGTATAGGAGAAGGGATGTACG 59.561 52.174 0.00 0.00 0.00 3.67
5415 8775 4.458642 GTCGGTATAGGAGAAGGGATGTAC 59.541 50.000 0.00 0.00 0.00 2.90
5431 8815 2.686915 CCTCGAAGTTGTAGGTCGGTAT 59.313 50.000 0.00 0.00 35.51 2.73
5441 8828 2.881074 CACGATCATCCTCGAAGTTGT 58.119 47.619 0.00 0.00 41.12 3.32
5448 8835 1.006805 GGGAGCACGATCATCCTCG 60.007 63.158 0.00 0.00 44.14 4.63
5544 8931 1.063972 CTGAGCTCTTCTCTCGGCG 59.936 63.158 16.19 0.00 42.38 6.46
5593 8980 7.222000 AGAAAAACAAGTGTCTTACCAACAA 57.778 32.000 0.00 0.00 0.00 2.83
5597 8984 5.180271 ACGAGAAAAACAAGTGTCTTACCA 58.820 37.500 0.00 0.00 0.00 3.25
5624 9011 1.599071 TCAACAAGCTGAGCTTCGTTG 59.401 47.619 32.56 32.56 46.77 4.10
5625 9012 1.869767 CTCAACAAGCTGAGCTTCGTT 59.130 47.619 18.16 20.03 46.77 3.85
5637 9024 3.529533 CCTAGTCATCCAGCTCAACAAG 58.470 50.000 0.00 0.00 0.00 3.16
5638 9025 2.237143 CCCTAGTCATCCAGCTCAACAA 59.763 50.000 0.00 0.00 0.00 2.83
5639 9026 1.833630 CCCTAGTCATCCAGCTCAACA 59.166 52.381 0.00 0.00 0.00 3.33
5640 9027 1.474143 GCCCTAGTCATCCAGCTCAAC 60.474 57.143 0.00 0.00 0.00 3.18
5641 9028 0.833287 GCCCTAGTCATCCAGCTCAA 59.167 55.000 0.00 0.00 0.00 3.02
5642 9029 0.325577 TGCCCTAGTCATCCAGCTCA 60.326 55.000 0.00 0.00 0.00 4.26
5643 9030 1.001860 GATGCCCTAGTCATCCAGCTC 59.998 57.143 9.79 0.00 35.49 4.09
5644 9031 1.055040 GATGCCCTAGTCATCCAGCT 58.945 55.000 9.79 0.00 35.49 4.24
5645 9032 1.055040 AGATGCCCTAGTCATCCAGC 58.945 55.000 14.86 0.00 40.79 4.85
5646 9033 2.288702 CGAAGATGCCCTAGTCATCCAG 60.289 54.545 14.86 6.67 40.79 3.86
5647 9034 1.688735 CGAAGATGCCCTAGTCATCCA 59.311 52.381 14.86 0.00 40.79 3.41
5648 9035 1.689273 ACGAAGATGCCCTAGTCATCC 59.311 52.381 14.86 4.50 40.79 3.51
5649 9036 2.362397 TGACGAAGATGCCCTAGTCATC 59.638 50.000 12.01 12.01 37.58 2.92
5650 9037 2.363680 CTGACGAAGATGCCCTAGTCAT 59.636 50.000 11.72 0.00 39.89 3.06
5651 9038 1.751351 CTGACGAAGATGCCCTAGTCA 59.249 52.381 0.00 11.18 39.04 3.41
5652 9039 1.067821 CCTGACGAAGATGCCCTAGTC 59.932 57.143 0.00 0.00 34.95 2.59
5653 9040 1.115467 CCTGACGAAGATGCCCTAGT 58.885 55.000 0.00 0.00 0.00 2.57
5654 9041 1.403814 TCCTGACGAAGATGCCCTAG 58.596 55.000 0.00 0.00 0.00 3.02
5655 9042 1.860641 TTCCTGACGAAGATGCCCTA 58.139 50.000 0.00 0.00 0.00 3.53
5656 9043 2.683916 TTCCTGACGAAGATGCCCT 58.316 52.632 0.00 0.00 0.00 5.19
5841 9263 6.566197 AGTCTGTTTCAATTGTCCAATCTC 57.434 37.500 5.13 0.00 0.00 2.75
5951 9376 0.306533 CCGTCCATAAAAATCGCCCG 59.693 55.000 0.00 0.00 0.00 6.13
5985 9410 4.513442 TGCCATGGACTAATGTCAACTAC 58.487 43.478 18.40 0.00 44.61 2.73
6081 9507 2.421619 CAAGGCCTCTTCTGAACTGAC 58.578 52.381 5.23 0.00 0.00 3.51
6182 9608 2.239907 GCTTGGGGAAGTAAGGACAGAT 59.760 50.000 0.00 0.00 0.00 2.90
6191 9617 2.524306 CATGGTTTGCTTGGGGAAGTA 58.476 47.619 0.00 0.00 0.00 2.24
6192 9618 1.341080 CATGGTTTGCTTGGGGAAGT 58.659 50.000 0.00 0.00 0.00 3.01
6193 9619 0.609662 CCATGGTTTGCTTGGGGAAG 59.390 55.000 2.57 0.00 0.00 3.46
6194 9620 1.479368 GCCATGGTTTGCTTGGGGAA 61.479 55.000 14.67 0.00 0.00 3.97
6195 9621 1.912763 GCCATGGTTTGCTTGGGGA 60.913 57.895 14.67 0.00 0.00 4.81
6196 9622 2.664398 GCCATGGTTTGCTTGGGG 59.336 61.111 14.67 0.00 0.00 4.96
6197 9623 1.914764 AGGCCATGGTTTGCTTGGG 60.915 57.895 14.67 0.00 0.00 4.12
6198 9624 1.294138 CAGGCCATGGTTTGCTTGG 59.706 57.895 14.67 0.00 31.59 3.61
6199 9625 1.375013 GCAGGCCATGGTTTGCTTG 60.375 57.895 25.90 14.77 37.60 4.01
6200 9626 1.534717 AGCAGGCCATGGTTTGCTT 60.535 52.632 28.57 17.89 43.91 3.91
6201 9627 2.118951 AGCAGGCCATGGTTTGCT 59.881 55.556 28.57 28.57 41.74 3.91
6206 9632 5.955961 AAATAAATTAAGCAGGCCATGGT 57.044 34.783 14.67 2.91 42.89 3.55
6263 9689 9.315363 TGTAAAACTCTCTCTCTCTCCTTATTT 57.685 33.333 0.00 0.00 0.00 1.40
6264 9690 8.887264 TGTAAAACTCTCTCTCTCTCCTTATT 57.113 34.615 0.00 0.00 0.00 1.40
6265 9691 8.887264 TTGTAAAACTCTCTCTCTCTCCTTAT 57.113 34.615 0.00 0.00 0.00 1.73
6266 9692 7.094118 GCTTGTAAAACTCTCTCTCTCTCCTTA 60.094 40.741 0.00 0.00 0.00 2.69
6267 9693 6.295067 GCTTGTAAAACTCTCTCTCTCTCCTT 60.295 42.308 0.00 0.00 0.00 3.36
6268 9694 5.185056 GCTTGTAAAACTCTCTCTCTCTCCT 59.815 44.000 0.00 0.00 0.00 3.69
6269 9695 5.407502 GCTTGTAAAACTCTCTCTCTCTCC 58.592 45.833 0.00 0.00 0.00 3.71
6270 9696 5.092781 CGCTTGTAAAACTCTCTCTCTCTC 58.907 45.833 0.00 0.00 0.00 3.20
6271 9697 4.082463 CCGCTTGTAAAACTCTCTCTCTCT 60.082 45.833 0.00 0.00 0.00 3.10
6272 9698 4.170256 CCGCTTGTAAAACTCTCTCTCTC 58.830 47.826 0.00 0.00 0.00 3.20
6273 9699 3.615351 GCCGCTTGTAAAACTCTCTCTCT 60.615 47.826 0.00 0.00 0.00 3.10
6274 9700 2.668945 GCCGCTTGTAAAACTCTCTCTC 59.331 50.000 0.00 0.00 0.00 3.20
6275 9701 2.613223 GGCCGCTTGTAAAACTCTCTCT 60.613 50.000 0.00 0.00 0.00 3.10
6276 9702 1.732809 GGCCGCTTGTAAAACTCTCTC 59.267 52.381 0.00 0.00 0.00 3.20
6277 9703 1.071699 TGGCCGCTTGTAAAACTCTCT 59.928 47.619 0.00 0.00 0.00 3.10
6278 9704 1.197036 GTGGCCGCTTGTAAAACTCTC 59.803 52.381 9.68 0.00 0.00 3.20
6279 9705 1.235724 GTGGCCGCTTGTAAAACTCT 58.764 50.000 9.68 0.00 0.00 3.24
6280 9706 0.948678 TGTGGCCGCTTGTAAAACTC 59.051 50.000 18.96 0.00 0.00 3.01
6281 9707 1.394618 TTGTGGCCGCTTGTAAAACT 58.605 45.000 18.96 0.00 0.00 2.66
6282 9708 2.432206 ATTGTGGCCGCTTGTAAAAC 57.568 45.000 18.96 0.00 0.00 2.43
6283 9709 2.094957 GCTATTGTGGCCGCTTGTAAAA 60.095 45.455 18.96 1.99 0.00 1.52
6284 9710 1.470890 GCTATTGTGGCCGCTTGTAAA 59.529 47.619 18.96 2.81 0.00 2.01
6285 9711 1.091537 GCTATTGTGGCCGCTTGTAA 58.908 50.000 18.96 3.24 0.00 2.41
6286 9712 1.087202 CGCTATTGTGGCCGCTTGTA 61.087 55.000 18.96 6.76 0.00 2.41
6287 9713 2.398554 CGCTATTGTGGCCGCTTGT 61.399 57.895 18.96 5.88 0.00 3.16
6288 9714 2.404789 CGCTATTGTGGCCGCTTG 59.595 61.111 18.96 5.99 0.00 4.01
6289 9715 2.824041 CCGCTATTGTGGCCGCTT 60.824 61.111 18.96 7.71 37.01 4.68
6295 9721 1.093972 TTGTCATGCCGCTATTGTGG 58.906 50.000 2.02 2.02 46.17 4.17
6296 9722 3.110358 CAATTGTCATGCCGCTATTGTG 58.890 45.455 0.00 0.00 0.00 3.33
6297 9723 2.480073 GCAATTGTCATGCCGCTATTGT 60.480 45.455 7.40 0.00 37.85 2.71
6298 9724 2.121786 GCAATTGTCATGCCGCTATTG 58.878 47.619 7.40 11.35 37.85 1.90
6299 9725 1.750206 TGCAATTGTCATGCCGCTATT 59.250 42.857 7.40 0.00 43.16 1.73
6300 9726 1.391577 TGCAATTGTCATGCCGCTAT 58.608 45.000 7.40 0.00 43.16 2.97
6301 9727 1.065851 CATGCAATTGTCATGCCGCTA 59.934 47.619 21.60 0.00 43.16 4.26
6302 9728 0.179121 CATGCAATTGTCATGCCGCT 60.179 50.000 21.60 0.00 43.16 5.52
6303 9729 0.179132 TCATGCAATTGTCATGCCGC 60.179 50.000 25.41 5.79 43.16 6.53
6304 9730 1.135344 TGTCATGCAATTGTCATGCCG 60.135 47.619 25.41 12.04 43.16 5.69
6305 9731 2.094390 ACTGTCATGCAATTGTCATGCC 60.094 45.455 25.41 19.70 43.16 4.40
6306 9732 3.226346 ACTGTCATGCAATTGTCATGC 57.774 42.857 25.41 21.65 44.08 4.06
6307 9733 5.946298 AGTAACTGTCATGCAATTGTCATG 58.054 37.500 24.77 24.77 41.87 3.07
6308 9734 5.706833 TGAGTAACTGTCATGCAATTGTCAT 59.293 36.000 7.40 8.27 0.00 3.06
6309 9735 5.049474 GTGAGTAACTGTCATGCAATTGTCA 60.049 40.000 7.40 6.18 0.00 3.58
6310 9736 5.385617 GTGAGTAACTGTCATGCAATTGTC 58.614 41.667 7.40 0.07 0.00 3.18
6311 9737 4.083855 CGTGAGTAACTGTCATGCAATTGT 60.084 41.667 7.40 0.00 0.00 2.71
6312 9738 4.083855 ACGTGAGTAACTGTCATGCAATTG 60.084 41.667 0.00 0.00 46.88 2.32
6313 9739 4.065088 ACGTGAGTAACTGTCATGCAATT 58.935 39.130 0.00 0.00 46.88 2.32
6314 9740 3.664107 ACGTGAGTAACTGTCATGCAAT 58.336 40.909 0.00 0.00 46.88 3.56
6315 9741 3.106242 ACGTGAGTAACTGTCATGCAA 57.894 42.857 0.00 0.00 46.88 4.08
6316 9742 2.812358 ACGTGAGTAACTGTCATGCA 57.188 45.000 0.00 0.00 46.88 3.96
6329 9755 4.060038 AGGGCTTATTATGTCACGTGAG 57.940 45.455 20.73 5.60 0.00 3.51
6330 9756 4.647853 ACTAGGGCTTATTATGTCACGTGA 59.352 41.667 15.76 15.76 0.00 4.35
6331 9757 4.945246 ACTAGGGCTTATTATGTCACGTG 58.055 43.478 9.94 9.94 0.00 4.49
6332 9758 5.452917 GGAACTAGGGCTTATTATGTCACGT 60.453 44.000 0.00 0.00 0.00 4.49
6333 9759 4.989168 GGAACTAGGGCTTATTATGTCACG 59.011 45.833 0.00 0.00 0.00 4.35
6334 9760 6.176014 AGGAACTAGGGCTTATTATGTCAC 57.824 41.667 0.00 0.00 36.02 3.67
6335 9761 6.824958 AAGGAACTAGGGCTTATTATGTCA 57.175 37.500 0.00 0.00 38.49 3.58
6336 9762 6.874664 GCTAAGGAACTAGGGCTTATTATGTC 59.125 42.308 0.00 0.00 38.49 3.06
6337 9763 6.329197 TGCTAAGGAACTAGGGCTTATTATGT 59.671 38.462 0.00 0.00 38.49 2.29
6338 9764 6.651225 GTGCTAAGGAACTAGGGCTTATTATG 59.349 42.308 0.00 0.00 38.49 1.90
6339 9765 6.239915 GGTGCTAAGGAACTAGGGCTTATTAT 60.240 42.308 0.00 0.00 38.49 1.28
6340 9766 5.071384 GGTGCTAAGGAACTAGGGCTTATTA 59.929 44.000 0.00 0.00 38.49 0.98
6341 9767 4.141459 GGTGCTAAGGAACTAGGGCTTATT 60.141 45.833 0.00 0.00 38.49 1.40
6342 9768 3.391626 GGTGCTAAGGAACTAGGGCTTAT 59.608 47.826 0.00 0.00 38.49 1.73
6343 9769 2.770232 GGTGCTAAGGAACTAGGGCTTA 59.230 50.000 0.00 0.00 38.49 3.09
6344 9770 1.560146 GGTGCTAAGGAACTAGGGCTT 59.440 52.381 0.00 0.00 38.49 4.35
6345 9771 1.205055 GGTGCTAAGGAACTAGGGCT 58.795 55.000 0.00 0.00 38.49 5.19
6346 9772 0.180642 GGGTGCTAAGGAACTAGGGC 59.819 60.000 0.00 0.00 38.49 5.19
6347 9773 0.464452 CGGGTGCTAAGGAACTAGGG 59.536 60.000 0.00 0.00 38.49 3.53
6348 9774 0.179081 GCGGGTGCTAAGGAACTAGG 60.179 60.000 0.00 0.00 35.97 3.02
6349 9775 0.535335 TGCGGGTGCTAAGGAACTAG 59.465 55.000 0.00 0.00 39.58 2.57
6350 9776 0.535335 CTGCGGGTGCTAAGGAACTA 59.465 55.000 0.00 0.00 39.58 2.24
6351 9777 1.296715 CTGCGGGTGCTAAGGAACT 59.703 57.895 0.00 0.00 42.00 3.01
6352 9778 0.248289 TACTGCGGGTGCTAAGGAAC 59.752 55.000 0.00 0.00 43.34 3.62
6353 9779 0.978151 TTACTGCGGGTGCTAAGGAA 59.022 50.000 0.00 0.00 43.34 3.36
6354 9780 0.248289 GTTACTGCGGGTGCTAAGGA 59.752 55.000 0.00 0.00 43.34 3.36
6355 9781 0.743345 GGTTACTGCGGGTGCTAAGG 60.743 60.000 0.00 0.00 43.34 2.69
6356 9782 0.743345 GGGTTACTGCGGGTGCTAAG 60.743 60.000 0.00 0.00 43.34 2.18
6357 9783 1.297364 GGGTTACTGCGGGTGCTAA 59.703 57.895 0.00 0.00 43.34 3.09
6358 9784 1.481901 TTGGGTTACTGCGGGTGCTA 61.482 55.000 0.00 0.00 43.34 3.49
6359 9785 2.346284 TTTGGGTTACTGCGGGTGCT 62.346 55.000 0.00 0.00 43.34 4.40
6360 9786 1.862602 CTTTGGGTTACTGCGGGTGC 61.863 60.000 0.00 0.00 43.20 5.01
6361 9787 1.862602 GCTTTGGGTTACTGCGGGTG 61.863 60.000 0.00 0.00 0.00 4.61
6362 9788 1.602605 GCTTTGGGTTACTGCGGGT 60.603 57.895 0.00 0.00 0.00 5.28
6363 9789 0.893727 AAGCTTTGGGTTACTGCGGG 60.894 55.000 0.00 0.00 0.00 6.13
6364 9790 0.521735 GAAGCTTTGGGTTACTGCGG 59.478 55.000 0.00 0.00 32.93 5.69
6365 9791 0.165944 CGAAGCTTTGGGTTACTGCG 59.834 55.000 5.72 0.00 32.93 5.18
6375 9801 7.536622 GATGATTATCAATAAGGCGAAGCTTTG 59.463 37.037 9.54 9.54 42.25 2.77
6376 9802 7.446625 AGATGATTATCAATAAGGCGAAGCTTT 59.553 33.333 0.00 0.00 45.08 3.51
6377 9803 6.939163 AGATGATTATCAATAAGGCGAAGCTT 59.061 34.615 0.00 0.00 44.74 3.74
6378 9804 6.370994 CAGATGATTATCAATAAGGCGAAGCT 59.629 38.462 0.00 0.00 44.74 3.74
6379 9805 6.541086 CAGATGATTATCAATAAGGCGAAGC 58.459 40.000 0.00 0.00 44.66 3.86
6380 9806 6.148315 TGCAGATGATTATCAATAAGGCGAAG 59.852 38.462 0.00 0.00 35.70 3.79
6381 9807 5.997129 TGCAGATGATTATCAATAAGGCGAA 59.003 36.000 0.00 0.00 35.70 4.70
6382 9808 5.550290 TGCAGATGATTATCAATAAGGCGA 58.450 37.500 0.00 0.00 35.70 5.54
6383 9809 5.640783 TCTGCAGATGATTATCAATAAGGCG 59.359 40.000 13.74 0.00 35.70 5.52
6384 9810 7.389884 TCTTCTGCAGATGATTATCAATAAGGC 59.610 37.037 24.24 0.40 35.70 4.35
6385 9811 8.843885 TCTTCTGCAGATGATTATCAATAAGG 57.156 34.615 24.24 0.00 35.70 2.69
6388 9814 9.148104 CGATTCTTCTGCAGATGATTATCAATA 57.852 33.333 27.33 13.91 35.70 1.90
6389 9815 7.119407 CCGATTCTTCTGCAGATGATTATCAAT 59.881 37.037 27.33 18.48 35.70 2.57
6390 9816 6.426025 CCGATTCTTCTGCAGATGATTATCAA 59.574 38.462 27.33 15.14 35.70 2.57
6391 9817 5.930569 CCGATTCTTCTGCAGATGATTATCA 59.069 40.000 27.33 15.76 35.70 2.15
6392 9818 5.931146 ACCGATTCTTCTGCAGATGATTATC 59.069 40.000 27.33 24.62 0.00 1.75
6393 9819 5.699915 CACCGATTCTTCTGCAGATGATTAT 59.300 40.000 27.33 20.27 0.00 1.28
6394 9820 5.052481 CACCGATTCTTCTGCAGATGATTA 58.948 41.667 27.33 17.00 0.00 1.75
6395 9821 3.875727 CACCGATTCTTCTGCAGATGATT 59.124 43.478 27.33 23.83 0.00 2.57
6396 9822 3.464907 CACCGATTCTTCTGCAGATGAT 58.535 45.455 27.33 18.78 0.00 2.45
6397 9823 2.419159 CCACCGATTCTTCTGCAGATGA 60.419 50.000 24.24 24.24 0.00 2.92
6398 9824 1.938577 CCACCGATTCTTCTGCAGATG 59.061 52.381 19.04 20.00 0.00 2.90
6399 9825 1.556911 ACCACCGATTCTTCTGCAGAT 59.443 47.619 19.04 1.31 0.00 2.90
6400 9826 0.976641 ACCACCGATTCTTCTGCAGA 59.023 50.000 13.74 13.74 0.00 4.26
6401 9827 1.081892 CACCACCGATTCTTCTGCAG 58.918 55.000 7.63 7.63 0.00 4.41
6402 9828 0.321564 CCACCACCGATTCTTCTGCA 60.322 55.000 0.00 0.00 0.00 4.41
6403 9829 0.321653 ACCACCACCGATTCTTCTGC 60.322 55.000 0.00 0.00 0.00 4.26
6404 9830 1.442769 CACCACCACCGATTCTTCTG 58.557 55.000 0.00 0.00 0.00 3.02
6405 9831 0.321653 GCACCACCACCGATTCTTCT 60.322 55.000 0.00 0.00 0.00 2.85
6406 9832 0.605319 TGCACCACCACCGATTCTTC 60.605 55.000 0.00 0.00 0.00 2.87
6407 9833 0.889186 GTGCACCACCACCGATTCTT 60.889 55.000 5.22 0.00 0.00 2.52
6408 9834 1.302511 GTGCACCACCACCGATTCT 60.303 57.895 5.22 0.00 0.00 2.40
6409 9835 1.298859 GAGTGCACCACCACCGATTC 61.299 60.000 14.63 0.00 36.38 2.52
6410 9836 1.302511 GAGTGCACCACCACCGATT 60.303 57.895 14.63 0.00 36.38 3.34
6411 9837 1.768684 AAGAGTGCACCACCACCGAT 61.769 55.000 14.63 0.00 36.38 4.18
6412 9838 2.439960 AAGAGTGCACCACCACCGA 61.440 57.895 14.63 0.00 36.38 4.69
6413 9839 2.111043 AAGAGTGCACCACCACCG 59.889 61.111 14.63 0.00 36.38 4.94
6414 9840 1.152963 ACAAGAGTGCACCACCACC 60.153 57.895 14.63 0.00 36.38 4.61
6415 9841 1.447317 CCACAAGAGTGCACCACCAC 61.447 60.000 14.63 0.31 44.53 4.16
6416 9842 1.152984 CCACAAGAGTGCACCACCA 60.153 57.895 14.63 0.00 44.53 4.17
6417 9843 2.555547 GCCACAAGAGTGCACCACC 61.556 63.158 14.63 3.08 44.53 4.61
6418 9844 1.383456 TTGCCACAAGAGTGCACCAC 61.383 55.000 14.63 8.44 44.53 4.16
6419 9845 0.682532 TTTGCCACAAGAGTGCACCA 60.683 50.000 14.63 0.00 44.53 4.17
6420 9846 0.249031 GTTTGCCACAAGAGTGCACC 60.249 55.000 14.63 5.12 44.53 5.01
6421 9847 0.455410 TGTTTGCCACAAGAGTGCAC 59.545 50.000 9.40 9.40 44.53 4.57
6422 9848 0.455410 GTGTTTGCCACAAGAGTGCA 59.545 50.000 0.00 0.00 44.53 4.57
6423 9849 3.256620 GTGTTTGCCACAAGAGTGC 57.743 52.632 0.00 0.00 44.53 4.40
6431 9857 0.818040 AACTCCCGAGTGTTTGCCAC 60.818 55.000 0.00 0.00 41.58 5.01
6432 9858 0.106918 AAACTCCCGAGTGTTTGCCA 60.107 50.000 0.00 0.00 41.58 4.92
6433 9859 1.029681 AAAACTCCCGAGTGTTTGCC 58.970 50.000 0.00 0.00 41.58 4.52
6434 9860 2.357952 AGAAAAACTCCCGAGTGTTTGC 59.642 45.455 16.03 9.12 45.97 3.68
6435 9861 3.303132 CGAGAAAAACTCCCGAGTGTTTG 60.303 47.826 16.03 0.98 45.97 2.93
6437 9863 2.159000 ACGAGAAAAACTCCCGAGTGTT 60.159 45.455 0.00 0.00 40.45 3.32
6438 9864 1.411612 ACGAGAAAAACTCCCGAGTGT 59.588 47.619 0.00 0.00 41.58 3.55
6439 9865 2.150397 ACGAGAAAAACTCCCGAGTG 57.850 50.000 0.00 0.00 41.58 3.51
6440 9866 2.547430 GGAACGAGAAAAACTCCCGAGT 60.547 50.000 0.00 0.00 44.94 4.18
6441 9867 2.067013 GGAACGAGAAAAACTCCCGAG 58.933 52.381 0.00 0.00 42.18 4.63
6442 9868 1.413445 TGGAACGAGAAAAACTCCCGA 59.587 47.619 0.00 0.00 42.18 5.14
6443 9869 1.873698 TGGAACGAGAAAAACTCCCG 58.126 50.000 0.00 0.00 42.18 5.14
6444 9870 4.270325 CGATATGGAACGAGAAAAACTCCC 59.730 45.833 0.00 0.00 42.18 4.30
6445 9871 4.868734 ACGATATGGAACGAGAAAAACTCC 59.131 41.667 0.00 0.00 42.18 3.85
6446 9872 5.005490 GGACGATATGGAACGAGAAAAACTC 59.995 44.000 0.00 0.00 41.79 3.01
6447 9873 4.868734 GGACGATATGGAACGAGAAAAACT 59.131 41.667 0.00 0.00 0.00 2.66
6448 9874 4.628333 TGGACGATATGGAACGAGAAAAAC 59.372 41.667 0.00 0.00 0.00 2.43
6449 9875 4.823157 TGGACGATATGGAACGAGAAAAA 58.177 39.130 0.00 0.00 0.00 1.94
6450 9876 4.459390 TGGACGATATGGAACGAGAAAA 57.541 40.909 0.00 0.00 0.00 2.29
6451 9877 4.158949 TCTTGGACGATATGGAACGAGAAA 59.841 41.667 0.00 0.00 0.00 2.52
6452 9878 3.697542 TCTTGGACGATATGGAACGAGAA 59.302 43.478 0.00 0.00 0.00 2.87
6453 9879 3.284617 TCTTGGACGATATGGAACGAGA 58.715 45.455 0.00 0.00 0.00 4.04
6454 9880 3.315470 TCTCTTGGACGATATGGAACGAG 59.685 47.826 0.00 0.00 0.00 4.18
6455 9881 3.066342 GTCTCTTGGACGATATGGAACGA 59.934 47.826 0.00 0.00 35.07 3.85
6456 9882 3.372954 GTCTCTTGGACGATATGGAACG 58.627 50.000 0.00 0.00 35.07 3.95
6457 9883 9.049632 CATGTTGTCTCTTGGACGATATGGAAC 62.050 44.444 12.08 0.00 45.88 3.62
6458 9884 7.125763 CATGTTGTCTCTTGGACGATATGGAA 61.126 42.308 12.08 0.00 45.88 3.53
6459 9885 5.682212 CATGTTGTCTCTTGGACGATATGGA 60.682 44.000 12.08 0.00 45.88 3.41
6460 9886 4.509230 CATGTTGTCTCTTGGACGATATGG 59.491 45.833 12.08 0.00 45.88 2.74
6461 9887 5.648033 CATGTTGTCTCTTGGACGATATG 57.352 43.478 7.84 7.84 45.10 1.78
6467 9893 3.070018 CTCACCATGTTGTCTCTTGGAC 58.930 50.000 5.79 0.00 44.70 4.02
6468 9894 2.038952 CCTCACCATGTTGTCTCTTGGA 59.961 50.000 5.79 0.00 36.74 3.53
6469 9895 2.038952 TCCTCACCATGTTGTCTCTTGG 59.961 50.000 0.00 0.00 38.22 3.61
6470 9896 3.007290 TCTCCTCACCATGTTGTCTCTTG 59.993 47.826 0.00 0.00 0.00 3.02
6471 9897 3.242867 TCTCCTCACCATGTTGTCTCTT 58.757 45.455 0.00 0.00 0.00 2.85
6472 9898 2.830923 CTCTCCTCACCATGTTGTCTCT 59.169 50.000 0.00 0.00 0.00 3.10
6473 9899 2.564947 ACTCTCCTCACCATGTTGTCTC 59.435 50.000 0.00 0.00 0.00 3.36
6474 9900 2.301296 CACTCTCCTCACCATGTTGTCT 59.699 50.000 0.00 0.00 0.00 3.41
6475 9901 2.613977 CCACTCTCCTCACCATGTTGTC 60.614 54.545 0.00 0.00 0.00 3.18
6476 9902 1.349026 CCACTCTCCTCACCATGTTGT 59.651 52.381 0.00 0.00 0.00 3.32
6477 9903 1.947678 GCCACTCTCCTCACCATGTTG 60.948 57.143 0.00 0.00 0.00 3.33
6478 9904 0.326264 GCCACTCTCCTCACCATGTT 59.674 55.000 0.00 0.00 0.00 2.71
6479 9905 0.837691 TGCCACTCTCCTCACCATGT 60.838 55.000 0.00 0.00 0.00 3.21
6480 9906 0.325933 TTGCCACTCTCCTCACCATG 59.674 55.000 0.00 0.00 0.00 3.66
6481 9907 1.067295 TTTGCCACTCTCCTCACCAT 58.933 50.000 0.00 0.00 0.00 3.55
6482 9908 0.108585 GTTTGCCACTCTCCTCACCA 59.891 55.000 0.00 0.00 0.00 4.17
6483 9909 0.108585 TGTTTGCCACTCTCCTCACC 59.891 55.000 0.00 0.00 0.00 4.02
6484 9910 1.230324 GTGTTTGCCACTCTCCTCAC 58.770 55.000 0.00 0.00 41.11 3.51
6485 9911 3.706055 GTGTTTGCCACTCTCCTCA 57.294 52.632 0.00 0.00 41.11 3.86
6493 9919 0.818040 AACTCCCGAGTGTTTGCCAC 60.818 55.000 0.00 0.00 41.58 5.01
6494 9920 0.106918 AAACTCCCGAGTGTTTGCCA 60.107 50.000 0.00 0.00 41.58 4.92
6495 9921 1.029681 AAAACTCCCGAGTGTTTGCC 58.970 50.000 0.00 0.00 41.58 4.52
6496 9922 2.357952 AGAAAAACTCCCGAGTGTTTGC 59.642 45.455 16.03 9.12 45.97 3.68
6497 9923 3.303132 CGAGAAAAACTCCCGAGTGTTTG 60.303 47.826 16.03 0.98 45.97 2.93
6499 9925 2.159000 ACGAGAAAAACTCCCGAGTGTT 60.159 45.455 0.00 0.00 40.45 3.32
6500 9926 1.411612 ACGAGAAAAACTCCCGAGTGT 59.588 47.619 0.00 0.00 41.58 3.55
6501 9927 2.150397 ACGAGAAAAACTCCCGAGTG 57.850 50.000 0.00 0.00 41.58 3.51
6502 9928 2.547430 GGAACGAGAAAAACTCCCGAGT 60.547 50.000 0.00 0.00 44.94 4.18
6503 9929 2.067013 GGAACGAGAAAAACTCCCGAG 58.933 52.381 0.00 0.00 42.18 4.63
6504 9930 1.413445 TGGAACGAGAAAAACTCCCGA 59.587 47.619 0.00 0.00 42.18 5.14
6505 9931 1.873698 TGGAACGAGAAAAACTCCCG 58.126 50.000 0.00 0.00 42.18 5.14
6506 9932 4.270325 CGATATGGAACGAGAAAAACTCCC 59.730 45.833 0.00 0.00 42.18 4.30
6507 9933 4.868734 ACGATATGGAACGAGAAAAACTCC 59.131 41.667 0.00 0.00 42.18 3.85
6508 9934 5.005490 GGACGATATGGAACGAGAAAAACTC 59.995 44.000 0.00 0.00 41.79 3.01
6509 9935 4.868734 GGACGATATGGAACGAGAAAAACT 59.131 41.667 0.00 0.00 0.00 2.66
6510 9936 4.628333 TGGACGATATGGAACGAGAAAAAC 59.372 41.667 0.00 0.00 0.00 2.43
6511 9937 4.823157 TGGACGATATGGAACGAGAAAAA 58.177 39.130 0.00 0.00 0.00 1.94
6512 9938 4.459390 TGGACGATATGGAACGAGAAAA 57.541 40.909 0.00 0.00 0.00 2.29
6513 9939 4.158949 TCTTGGACGATATGGAACGAGAAA 59.841 41.667 0.00 0.00 0.00 2.52
6514 9940 3.697542 TCTTGGACGATATGGAACGAGAA 59.302 43.478 0.00 0.00 0.00 2.87
6515 9941 3.284617 TCTTGGACGATATGGAACGAGA 58.715 45.455 0.00 0.00 0.00 4.04
6516 9942 3.315470 TCTCTTGGACGATATGGAACGAG 59.685 47.826 0.00 0.00 0.00 4.18
6517 9943 3.066342 GTCTCTTGGACGATATGGAACGA 59.934 47.826 0.00 0.00 35.07 3.85
6518 9944 3.372954 GTCTCTTGGACGATATGGAACG 58.627 50.000 0.00 0.00 35.07 3.95
6519 9945 9.049632 CATGTTGTCTCTTGGACGATATGGAAC 62.050 44.444 12.08 0.00 45.88 3.62
6520 9946 7.125763 CATGTTGTCTCTTGGACGATATGGAA 61.126 42.308 12.08 0.00 45.88 3.53
6521 9947 5.682212 CATGTTGTCTCTTGGACGATATGGA 60.682 44.000 12.08 0.00 45.88 3.41
6522 9948 4.509230 CATGTTGTCTCTTGGACGATATGG 59.491 45.833 12.08 0.00 45.88 2.74
6523 9949 5.648033 CATGTTGTCTCTTGGACGATATG 57.352 43.478 7.84 7.84 45.10 1.78
6529 9955 3.070018 CTCACCATGTTGTCTCTTGGAC 58.930 50.000 5.79 0.00 44.70 4.02
6530 9956 2.038952 CCTCACCATGTTGTCTCTTGGA 59.961 50.000 5.79 0.00 36.74 3.53
6531 9957 2.038952 TCCTCACCATGTTGTCTCTTGG 59.961 50.000 0.00 0.00 38.22 3.61
6532 9958 3.407424 TCCTCACCATGTTGTCTCTTG 57.593 47.619 0.00 0.00 0.00 3.02
6533 9959 3.244700 CCTTCCTCACCATGTTGTCTCTT 60.245 47.826 0.00 0.00 0.00 2.85
6534 9960 2.304180 CCTTCCTCACCATGTTGTCTCT 59.696 50.000 0.00 0.00 0.00 3.10
6535 9961 2.039084 ACCTTCCTCACCATGTTGTCTC 59.961 50.000 0.00 0.00 0.00 3.36
6536 9962 2.039084 GACCTTCCTCACCATGTTGTCT 59.961 50.000 0.00 0.00 0.00 3.41
6537 9963 2.224523 TGACCTTCCTCACCATGTTGTC 60.225 50.000 0.00 0.00 0.00 3.18
6538 9964 1.774254 TGACCTTCCTCACCATGTTGT 59.226 47.619 0.00 0.00 0.00 3.32
6539 9965 2.566833 TGACCTTCCTCACCATGTTG 57.433 50.000 0.00 0.00 0.00 3.33
6540 9966 2.644299 TGATGACCTTCCTCACCATGTT 59.356 45.455 0.00 0.00 0.00 2.71
6541 9967 2.026822 GTGATGACCTTCCTCACCATGT 60.027 50.000 0.00 0.00 36.45 3.21
6542 9968 2.026915 TGTGATGACCTTCCTCACCATG 60.027 50.000 8.54 0.00 40.03 3.66
6543 9969 2.026822 GTGTGATGACCTTCCTCACCAT 60.027 50.000 8.54 0.00 40.03 3.55
6544 9970 1.347707 GTGTGATGACCTTCCTCACCA 59.652 52.381 8.54 0.00 40.03 4.17
6545 9971 1.673033 CGTGTGATGACCTTCCTCACC 60.673 57.143 8.54 1.63 40.03 4.02
6546 9972 1.714794 CGTGTGATGACCTTCCTCAC 58.285 55.000 5.04 5.04 40.79 3.51
6547 9973 0.037326 GCGTGTGATGACCTTCCTCA 60.037 55.000 0.00 0.00 0.00 3.86
6548 9974 0.741221 GGCGTGTGATGACCTTCCTC 60.741 60.000 0.00 0.00 0.00 3.71
6549 9975 1.194781 AGGCGTGTGATGACCTTCCT 61.195 55.000 0.00 0.00 0.00 3.36
6550 9976 0.535335 TAGGCGTGTGATGACCTTCC 59.465 55.000 0.00 0.00 33.60 3.46
6551 9977 2.604046 ATAGGCGTGTGATGACCTTC 57.396 50.000 0.00 0.00 33.60 3.46
6552 9978 3.009723 CAAATAGGCGTGTGATGACCTT 58.990 45.455 0.00 0.00 33.60 3.50
6553 9979 2.632377 CAAATAGGCGTGTGATGACCT 58.368 47.619 0.00 0.00 36.27 3.85
6554 9980 1.670811 CCAAATAGGCGTGTGATGACC 59.329 52.381 0.00 0.00 0.00 4.02
6555 9981 1.670811 CCCAAATAGGCGTGTGATGAC 59.329 52.381 0.00 0.00 35.39 3.06
6556 9982 1.280710 ACCCAAATAGGCGTGTGATGA 59.719 47.619 0.00 0.00 35.39 2.92
6557 9983 1.750193 ACCCAAATAGGCGTGTGATG 58.250 50.000 0.00 0.00 35.39 3.07
6558 9984 2.091541 CAACCCAAATAGGCGTGTGAT 58.908 47.619 0.00 0.00 35.39 3.06
6559 9985 1.202830 ACAACCCAAATAGGCGTGTGA 60.203 47.619 0.00 0.00 33.17 3.58
6560 9986 1.068610 CACAACCCAAATAGGCGTGTG 60.069 52.381 0.00 0.00 41.38 3.82
6561 9987 1.243902 CACAACCCAAATAGGCGTGT 58.756 50.000 0.00 0.00 34.29 4.49
6562 9988 0.109319 GCACAACCCAAATAGGCGTG 60.109 55.000 0.00 0.00 35.07 5.34
6563 9989 0.538516 TGCACAACCCAAATAGGCGT 60.539 50.000 0.00 0.00 35.39 5.68
6564 9990 0.817013 ATGCACAACCCAAATAGGCG 59.183 50.000 0.00 0.00 35.39 5.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.