Multiple sequence alignment - TraesCS2D01G306800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G306800 chr2D 100.000 8421 0 0 1 8421 392695475 392687055 0.000000e+00 15551.0
1 TraesCS2D01G306800 chr2D 95.868 242 10 0 6225 6466 155616774 155616533 7.920000e-105 392.0
2 TraesCS2D01G306800 chr2D 93.496 123 6 1 1516 1636 392693841 392693719 1.870000e-41 182.0
3 TraesCS2D01G306800 chr2D 93.496 123 6 1 1635 1757 392693960 392693840 1.870000e-41 182.0
4 TraesCS2D01G306800 chr2D 87.838 74 8 1 8006 8079 392687397 392687325 1.510000e-12 86.1
5 TraesCS2D01G306800 chr2D 87.838 74 8 1 8079 8151 392687470 392687397 1.510000e-12 86.1
6 TraesCS2D01G306800 chr2B 94.633 3615 102 31 679 4223 464680648 464677056 0.000000e+00 5517.0
7 TraesCS2D01G306800 chr2B 94.840 1880 55 11 6464 8334 464675188 464673342 0.000000e+00 2896.0
8 TraesCS2D01G306800 chr2B 94.676 1653 75 11 4317 5964 464677057 464675413 0.000000e+00 2553.0
9 TraesCS2D01G306800 chr2B 85.988 678 63 17 1 671 464681354 464680702 0.000000e+00 697.0
10 TraesCS2D01G306800 chr2B 88.667 300 15 6 5942 6232 464675470 464675181 1.740000e-91 348.0
11 TraesCS2D01G306800 chr2B 95.161 124 4 2 1635 1757 464679804 464679682 2.400000e-45 195.0
12 TraesCS2D01G306800 chr2B 92.063 126 5 4 1516 1636 464679683 464679558 1.120000e-38 172.0
13 TraesCS2D01G306800 chr2B 90.678 118 8 2 4202 4318 403101591 403101706 4.070000e-33 154.0
14 TraesCS2D01G306800 chr2B 88.095 126 9 6 4197 4319 37953675 37953553 2.450000e-30 145.0
15 TraesCS2D01G306800 chr2A 95.107 2616 65 18 1631 4223 530750832 530748257 0.000000e+00 4063.0
16 TraesCS2D01G306800 chr2A 94.920 1929 69 15 4317 6232 530748258 530746346 0.000000e+00 2992.0
17 TraesCS2D01G306800 chr2A 93.621 1740 62 13 6464 8189 530746353 530744649 0.000000e+00 2553.0
18 TraesCS2D01G306800 chr2A 92.781 942 42 11 717 1636 530751643 530750706 0.000000e+00 1339.0
19 TraesCS2D01G306800 chr2A 92.692 561 36 2 111 670 530753535 530752979 0.000000e+00 804.0
20 TraesCS2D01G306800 chr2A 89.286 112 8 2 4709 4817 587158358 587158248 4.100000e-28 137.0
21 TraesCS2D01G306800 chr2A 93.827 81 2 2 1 81 530753914 530753837 1.480000e-22 119.0
22 TraesCS2D01G306800 chr1D 95.062 243 12 0 6224 6466 179041757 179041999 4.770000e-102 383.0
23 TraesCS2D01G306800 chr1D 94.606 241 13 0 6225 6465 169806138 169806378 2.870000e-99 374.0
24 TraesCS2D01G306800 chr1D 96.040 101 4 0 4221 4321 284238328 284238228 1.880000e-36 165.0
25 TraesCS2D01G306800 chr1D 95.192 104 4 1 4221 4324 483907581 483907683 6.760000e-36 163.0
26 TraesCS2D01G306800 chr1D 90.826 109 10 0 4211 4319 220408729 220408837 6.810000e-31 147.0
27 TraesCS2D01G306800 chr6A 94.628 242 13 0 6225 6466 178680375 178680134 7.980000e-100 375.0
28 TraesCS2D01G306800 chr6A 93.902 246 14 1 6223 6468 319782734 319782490 3.710000e-98 370.0
29 TraesCS2D01G306800 chr6A 90.909 110 10 0 4209 4318 380939697 380939806 1.890000e-31 148.0
30 TraesCS2D01G306800 chr4D 94.606 241 13 0 6225 6465 488451249 488451489 2.870000e-99 374.0
31 TraesCS2D01G306800 chr4D 92.233 103 6 1 4707 4807 375134919 375135021 2.450000e-30 145.0
32 TraesCS2D01G306800 chr4D 92.000 100 8 0 4221 4320 103233943 103233844 3.170000e-29 141.0
33 TraesCS2D01G306800 chr7D 92.607 257 17 2 6225 6481 218082393 218082647 1.340000e-97 368.0
34 TraesCS2D01G306800 chr4A 93.548 248 15 1 6220 6467 219109696 219109450 1.340000e-97 368.0
35 TraesCS2D01G306800 chr4A 94.286 105 6 0 4222 4326 703667641 703667537 2.430000e-35 161.0
36 TraesCS2D01G306800 chr4A 89.815 108 11 0 4211 4318 644032024 644032131 1.140000e-28 139.0
37 TraesCS2D01G306800 chr6D 93.827 243 15 0 6225 6467 340183374 340183132 4.800000e-97 366.0
38 TraesCS2D01G306800 chr6D 88.793 116 9 4 4208 4321 374820316 374820203 1.140000e-28 139.0
39 TraesCS2D01G306800 chr5D 97.030 101 2 1 4223 4323 328911653 328911554 1.450000e-37 169.0
40 TraesCS2D01G306800 chr6B 93.694 111 5 2 4214 4323 276558779 276558670 1.880000e-36 165.0
41 TraesCS2D01G306800 chr4B 96.078 102 3 1 4222 4322 610759229 610759128 1.880000e-36 165.0
42 TraesCS2D01G306800 chr4B 94.340 106 5 1 4219 4324 32922893 32922789 2.430000e-35 161.0
43 TraesCS2D01G306800 chr4B 92.079 101 4 3 4708 4805 664775616 664775715 1.140000e-28 139.0
44 TraesCS2D01G306800 chr5B 95.192 104 4 1 4221 4324 91884433 91884535 6.760000e-36 163.0
45 TraesCS2D01G306800 chr1B 91.964 112 7 2 4207 4318 359902157 359902048 1.130000e-33 156.0
46 TraesCS2D01G306800 chr1B 93.333 105 5 1 4708 4810 572529457 572529353 4.070000e-33 154.0
47 TraesCS2D01G306800 chr7A 92.233 103 6 1 4707 4807 735412101 735412203 2.450000e-30 145.0
48 TraesCS2D01G306800 chr3A 93.878 98 2 3 4713 4807 444462660 444462756 2.450000e-30 145.0
49 TraesCS2D01G306800 chr1A 88.136 118 12 1 4710 4825 474641773 474641656 1.140000e-28 139.0
50 TraesCS2D01G306800 chr1A 88.991 109 12 0 4211 4319 284145597 284145705 1.470000e-27 135.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G306800 chr2D 392687055 392695475 8420 True 15551.000000 15551 100.000000 1 8421 1 chr2D.!!$R2 8420
1 TraesCS2D01G306800 chr2B 464673342 464681354 8012 True 1768.285714 5517 92.289714 1 8334 7 chr2B.!!$R2 8333
2 TraesCS2D01G306800 chr2A 530744649 530753914 9265 True 1978.333333 4063 93.824667 1 8189 6 chr2A.!!$R2 8188

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
130 404 1.020861 TCAGTGGATGATGCACGCAC 61.021 55.000 11.41 0.0 43.86 5.34 F
860 2443 1.219393 GAAAGGCGAGAGTGGGGAG 59.781 63.158 0.00 0.0 0.00 4.30 F
1348 2936 1.269517 GCTAGATCCACGGCTGAGAAG 60.270 57.143 0.00 0.0 0.00 2.85 F
2636 4276 1.597461 GTTTGAGGCTCTACCCGCT 59.403 57.895 16.72 0.0 40.58 5.52 F
4406 6052 0.106819 TACTCCCGTCTGTAGAGGGC 60.107 60.000 13.73 0.0 45.91 5.19 F
5626 7277 0.764890 TGTTGTGGCTAGGTCTTGCT 59.235 50.000 4.63 0.0 0.00 3.91 F
6275 7941 0.030235 GCGTTTTTCAAGACCGCCTT 59.970 50.000 0.00 0.0 38.52 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1348 2936 0.163788 CACGATGCAACAAGGTCGAC 59.836 55.0 7.13 7.13 37.51 4.20 R
1993 3591 0.246086 TTCGCACCATGGAAAATGCC 59.754 50.0 21.47 1.85 34.49 4.40 R
3170 4815 0.106894 GGAGCCCAGAAATAGGACCG 59.893 60.0 0.00 0.00 0.00 4.79 R
4635 6282 0.542232 ACGACCACCTCACTAAGCCT 60.542 55.0 0.00 0.00 0.00 4.58 R
5651 7302 0.389817 CGTCTCCGCATCCAGTTGAA 60.390 55.0 0.00 0.00 0.00 2.69 R
6610 8277 0.832135 TAAAAACATGGGCCCCGCAA 60.832 50.0 22.27 0.00 0.00 4.85 R
7840 9513 0.174845 TGGAACTCGGGCTACATTCG 59.825 55.0 0.00 0.00 0.00 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 3.552541 GAGCAGCAAATATGAAGATGCG 58.447 45.455 0.00 0.00 43.39 4.73
39 40 4.129380 AGCAGCAAATATGAAGATGCGTA 58.871 39.130 0.00 0.00 43.39 4.42
40 41 4.758674 AGCAGCAAATATGAAGATGCGTAT 59.241 37.500 0.00 0.00 43.39 3.06
42 43 6.596888 AGCAGCAAATATGAAGATGCGTATAT 59.403 34.615 0.00 0.00 43.39 0.86
105 367 6.981762 TTGACATTTGTTTTCAACTTGCAT 57.018 29.167 0.00 0.00 39.73 3.96
130 404 1.020861 TCAGTGGATGATGCACGCAC 61.021 55.000 11.41 0.00 43.86 5.34
152 426 7.413438 CGCACCTCTCTTGCATAAATATATTCC 60.413 40.741 0.00 0.00 40.20 3.01
153 427 7.148171 GCACCTCTCTTGCATAAATATATTCCC 60.148 40.741 0.00 0.00 39.93 3.97
155 429 9.338968 ACCTCTCTTGCATAAATATATTCCCTA 57.661 33.333 0.00 0.00 0.00 3.53
160 434 9.959721 TCTTGCATAAATATATTCCCTAGGTTC 57.040 33.333 8.29 0.00 0.00 3.62
175 449 3.933861 AGGTTCCTGTATGATGGTTCC 57.066 47.619 0.00 0.00 0.00 3.62
187 461 2.213499 GATGGTTCCGCTTCTATGGTG 58.787 52.381 0.00 0.00 0.00 4.17
263 537 4.380233 GGCCATTCTGCTATGCATAATCAC 60.380 45.833 8.00 0.00 38.13 3.06
275 549 2.609244 GCATAATCACGAGAGGAGAGGC 60.609 54.545 0.00 0.00 0.00 4.70
341 618 4.576330 AGGAGAAATACCTTGGTTCAGG 57.424 45.455 0.00 0.00 40.23 3.86
442 719 1.270839 ACTGGTCGGTGTTGAATCAGG 60.271 52.381 0.00 0.00 0.00 3.86
465 743 5.181748 GGATATTGAGATGGTGTATGCCTC 58.818 45.833 0.00 0.00 0.00 4.70
520 798 6.700352 TGATTTTCCAAGTTTTCATGATCCC 58.300 36.000 0.00 0.00 0.00 3.85
544 822 1.751351 TCCATGTCCAGATCTCGTCAC 59.249 52.381 0.00 0.00 0.00 3.67
624 902 6.913873 ATCAATATCATTTTTGCAAGGTGC 57.086 33.333 0.00 0.00 45.29 5.01
631 909 2.582728 TTTTGCAAGGTGCTTGTGAG 57.417 45.000 0.00 0.00 45.31 3.51
645 924 6.404074 GGTGCTTGTGAGAATTAGATCAAAGG 60.404 42.308 0.00 0.00 0.00 3.11
665 944 6.396829 AAGGTCCAACTTCTCTTTTGAATG 57.603 37.500 0.00 0.00 0.00 2.67
671 950 5.796935 CCAACTTCTCTTTTGAATGCATACG 59.203 40.000 0.00 0.00 0.00 3.06
672 951 6.348458 CCAACTTCTCTTTTGAATGCATACGA 60.348 38.462 0.00 0.00 0.00 3.43
674 953 7.009568 ACTTCTCTTTTGAATGCATACGATC 57.990 36.000 0.00 0.00 0.00 3.69
715 2272 3.500448 TCCAAGGTGCAGAATGTTGTA 57.500 42.857 0.00 0.00 39.31 2.41
743 2316 1.603802 CTTTCTTCCAGCGAAAGTGCA 59.396 47.619 0.00 0.00 41.35 4.57
802 2380 1.222113 GCTCTCCCTGCCCTGTTAC 59.778 63.158 0.00 0.00 0.00 2.50
818 2396 2.296752 TGTTACGTTACTACAGCCTGCA 59.703 45.455 6.24 0.00 0.00 4.41
821 2399 1.275291 ACGTTACTACAGCCTGCATGT 59.725 47.619 0.00 0.00 34.62 3.21
860 2443 1.219393 GAAAGGCGAGAGTGGGGAG 59.781 63.158 0.00 0.00 0.00 4.30
884 2467 4.713946 TGGTTTCGCCATCCAGTC 57.286 55.556 0.00 0.00 43.61 3.51
1227 2815 2.783284 CGTGTGAATTGTGCTGTGTTTC 59.217 45.455 0.00 0.00 0.00 2.78
1348 2936 1.269517 GCTAGATCCACGGCTGAGAAG 60.270 57.143 0.00 0.00 0.00 2.85
1748 3346 8.908786 ACATACTATATGCTGTTTGCTACATT 57.091 30.769 0.00 0.00 43.37 2.71
1749 3347 8.777413 ACATACTATATGCTGTTTGCTACATTG 58.223 33.333 0.00 0.00 43.37 2.82
1777 3375 5.710099 TCAGATGGATTTAACACAAAGGGAC 59.290 40.000 0.00 0.00 0.00 4.46
1873 3471 6.593382 GCCTCCTTCATCATATATGTGAGTTC 59.407 42.308 12.42 2.62 0.00 3.01
2023 3621 1.896220 TGGTGCGAAATTCTGCTTCT 58.104 45.000 10.12 0.00 0.00 2.85
2025 3623 2.030893 TGGTGCGAAATTCTGCTTCTTG 60.031 45.455 10.12 0.00 0.00 3.02
2168 3766 7.957002 TCCAGAAAGAGTATGTATCCTCAATC 58.043 38.462 0.00 0.00 0.00 2.67
2230 3829 6.652481 CCTTTGTATAATAGGGCATGAGTCAG 59.348 42.308 0.00 0.00 0.00 3.51
2243 3842 4.096984 GCATGAGTCAGGGAGGTAAAATTG 59.903 45.833 6.95 0.00 0.00 2.32
2249 3848 4.079253 TCAGGGAGGTAAAATTGTTGAGC 58.921 43.478 0.00 0.00 0.00 4.26
2278 3877 2.622942 TGCTTGAACCTGCTTAACCTTG 59.377 45.455 0.00 0.00 0.00 3.61
2279 3878 2.623416 GCTTGAACCTGCTTAACCTTGT 59.377 45.455 0.00 0.00 0.00 3.16
2280 3879 3.818773 GCTTGAACCTGCTTAACCTTGTA 59.181 43.478 0.00 0.00 0.00 2.41
2281 3880 4.459337 GCTTGAACCTGCTTAACCTTGTAT 59.541 41.667 0.00 0.00 0.00 2.29
2282 3881 5.048013 GCTTGAACCTGCTTAACCTTGTATT 60.048 40.000 0.00 0.00 0.00 1.89
2363 3979 5.016173 TGCTTTACTTTGATGGCCAGTTAT 58.984 37.500 13.05 0.00 0.00 1.89
2440 4056 8.633075 AGCACCAAATTTCGTTAAATGATATG 57.367 30.769 0.00 0.00 35.46 1.78
2475 4091 5.449588 CCTTTCTGCATGGCTTAGTATGTTG 60.450 44.000 0.00 0.00 0.00 3.33
2545 4181 3.436700 ACACTTTGCTGTTGCCTTTAC 57.563 42.857 0.00 0.00 38.71 2.01
2572 4208 3.604065 TCTCGTATAGCTGCGTGTTAG 57.396 47.619 0.00 0.00 0.00 2.34
2633 4273 1.810030 CGCGTTTGAGGCTCTACCC 60.810 63.158 16.72 5.61 40.58 3.69
2636 4276 1.597461 GTTTGAGGCTCTACCCGCT 59.403 57.895 16.72 0.00 40.58 5.52
2699 4340 6.092807 GCTAGTCCTGGTTGATCAACTTAAAG 59.907 42.308 31.81 23.37 40.94 1.85
2704 4345 8.360390 GTCCTGGTTGATCAACTTAAAGAAAAT 58.640 33.333 31.81 0.00 40.94 1.82
2768 4413 4.398044 AGTGCCTATTCCCGTTTTAATGTG 59.602 41.667 0.00 0.00 0.00 3.21
2781 4426 7.325097 CCCGTTTTAATGTGTTACTGATTTGTC 59.675 37.037 0.00 0.00 0.00 3.18
3257 4902 3.698040 GTGAACATGATCTGAATGGGCTT 59.302 43.478 0.00 0.00 0.00 4.35
3425 5070 2.672961 TCTTCATTGCAGACGGTAGG 57.327 50.000 0.00 0.00 0.00 3.18
3554 5199 5.223449 ACTTGTCGGATGGTTCTTAAAGA 57.777 39.130 0.00 0.00 0.00 2.52
3593 5238 4.265949 GCTTTTAAGCCGAGTGAAGATC 57.734 45.455 3.05 0.00 46.20 2.75
4025 5671 3.181434 ACTCTGTGCCATGTTTTCCCTTA 60.181 43.478 0.00 0.00 0.00 2.69
4115 5761 3.949754 CTGCACACCCAATCTATCATGTT 59.050 43.478 0.00 0.00 0.00 2.71
4190 5836 3.023832 AGGTCCTTTCCTGTTTTGTGTG 58.976 45.455 0.00 0.00 36.35 3.82
4226 5872 4.884164 CCAAATGGGTTTCTGATCTACTCC 59.116 45.833 0.00 0.00 0.00 3.85
4227 5873 4.779993 AATGGGTTTCTGATCTACTCCC 57.220 45.455 0.00 0.74 0.00 4.30
4228 5874 3.491766 TGGGTTTCTGATCTACTCCCT 57.508 47.619 12.19 0.00 35.00 4.20
4229 5875 3.375699 TGGGTTTCTGATCTACTCCCTC 58.624 50.000 12.19 0.00 35.00 4.30
4230 5876 2.701423 GGGTTTCTGATCTACTCCCTCC 59.299 54.545 0.00 0.00 0.00 4.30
4231 5877 2.362717 GGTTTCTGATCTACTCCCTCCG 59.637 54.545 0.00 0.00 0.00 4.63
4232 5878 3.025262 GTTTCTGATCTACTCCCTCCGT 58.975 50.000 0.00 0.00 0.00 4.69
4233 5879 2.642154 TCTGATCTACTCCCTCCGTC 57.358 55.000 0.00 0.00 0.00 4.79
4234 5880 1.143277 TCTGATCTACTCCCTCCGTCC 59.857 57.143 0.00 0.00 0.00 4.79
4235 5881 0.185416 TGATCTACTCCCTCCGTCCC 59.815 60.000 0.00 0.00 0.00 4.46
4236 5882 0.185416 GATCTACTCCCTCCGTCCCA 59.815 60.000 0.00 0.00 0.00 4.37
4237 5883 0.635009 ATCTACTCCCTCCGTCCCAA 59.365 55.000 0.00 0.00 0.00 4.12
4238 5884 0.410663 TCTACTCCCTCCGTCCCAAA 59.589 55.000 0.00 0.00 0.00 3.28
4239 5885 1.203212 TCTACTCCCTCCGTCCCAAAA 60.203 52.381 0.00 0.00 0.00 2.44
4240 5886 1.838077 CTACTCCCTCCGTCCCAAAAT 59.162 52.381 0.00 0.00 0.00 1.82
4241 5887 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
4242 5888 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
4243 5889 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
4244 5890 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
4245 5891 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
4246 5892 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
4247 5893 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
4248 5894 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
4249 5895 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
4250 5896 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
4251 5897 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
4252 5898 4.083484 CCGTCCCAAAATAAGTGTCTCAAC 60.083 45.833 0.00 0.00 0.00 3.18
4253 5899 4.755123 CGTCCCAAAATAAGTGTCTCAACT 59.245 41.667 0.00 0.00 0.00 3.16
4254 5900 5.238650 CGTCCCAAAATAAGTGTCTCAACTT 59.761 40.000 0.00 0.00 42.89 2.66
4255 5901 6.238648 CGTCCCAAAATAAGTGTCTCAACTTT 60.239 38.462 0.00 0.00 40.77 2.66
4256 5902 6.918022 GTCCCAAAATAAGTGTCTCAACTTTG 59.082 38.462 0.00 0.00 40.77 2.77
4257 5903 6.605594 TCCCAAAATAAGTGTCTCAACTTTGT 59.394 34.615 0.00 0.00 40.77 2.83
4258 5904 7.776030 TCCCAAAATAAGTGTCTCAACTTTGTA 59.224 33.333 0.00 0.00 40.77 2.41
4259 5905 7.860872 CCCAAAATAAGTGTCTCAACTTTGTAC 59.139 37.037 0.00 0.00 40.77 2.90
4260 5906 8.621286 CCAAAATAAGTGTCTCAACTTTGTACT 58.379 33.333 0.00 0.00 40.77 2.73
4263 5909 8.535690 AATAAGTGTCTCAACTTTGTACTAGC 57.464 34.615 0.00 0.00 40.77 3.42
4264 5910 5.793030 AGTGTCTCAACTTTGTACTAGCT 57.207 39.130 0.00 0.00 0.00 3.32
4265 5911 5.774630 AGTGTCTCAACTTTGTACTAGCTC 58.225 41.667 0.00 0.00 0.00 4.09
4266 5912 5.536916 AGTGTCTCAACTTTGTACTAGCTCT 59.463 40.000 0.00 0.00 0.00 4.09
4267 5913 6.715718 AGTGTCTCAACTTTGTACTAGCTCTA 59.284 38.462 0.00 0.00 0.00 2.43
4268 5914 7.024768 GTGTCTCAACTTTGTACTAGCTCTAG 58.975 42.308 0.00 2.55 39.04 2.43
4270 5916 7.881751 TGTCTCAACTTTGTACTAGCTCTAGTA 59.118 37.037 11.59 11.59 43.98 1.82
4271 5917 8.895737 GTCTCAACTTTGTACTAGCTCTAGTAT 58.104 37.037 16.96 1.87 46.57 2.12
4283 5929 8.954950 ACTAGCTCTAGTATAAAGTTGTACGA 57.045 34.615 7.73 0.00 43.98 3.43
4284 5930 9.388506 ACTAGCTCTAGTATAAAGTTGTACGAA 57.611 33.333 7.73 0.00 43.98 3.85
4285 5931 9.866936 CTAGCTCTAGTATAAAGTTGTACGAAG 57.133 37.037 0.00 0.00 31.09 3.79
4286 5932 7.194962 AGCTCTAGTATAAAGTTGTACGAAGC 58.805 38.462 0.00 10.98 33.36 3.86
4287 5933 7.067251 AGCTCTAGTATAAAGTTGTACGAAGCT 59.933 37.037 13.60 13.60 35.83 3.74
4288 5934 7.701501 GCTCTAGTATAAAGTTGTACGAAGCTT 59.298 37.037 0.00 0.00 32.04 3.74
4289 5935 8.906636 TCTAGTATAAAGTTGTACGAAGCTTG 57.093 34.615 2.10 0.00 31.09 4.01
4290 5936 8.733458 TCTAGTATAAAGTTGTACGAAGCTTGA 58.267 33.333 2.10 0.00 31.09 3.02
4291 5937 7.813852 AGTATAAAGTTGTACGAAGCTTGAG 57.186 36.000 2.10 0.00 31.09 3.02
4292 5938 7.600065 AGTATAAAGTTGTACGAAGCTTGAGA 58.400 34.615 2.10 0.00 31.09 3.27
4293 5939 6.707599 ATAAAGTTGTACGAAGCTTGAGAC 57.292 37.500 2.10 0.00 0.00 3.36
4294 5940 3.728076 AGTTGTACGAAGCTTGAGACA 57.272 42.857 2.10 1.30 0.00 3.41
4295 5941 3.381949 AGTTGTACGAAGCTTGAGACAC 58.618 45.455 2.10 2.80 0.00 3.67
4296 5942 3.068307 AGTTGTACGAAGCTTGAGACACT 59.932 43.478 2.10 2.71 0.00 3.55
4297 5943 3.728076 TGTACGAAGCTTGAGACACTT 57.272 42.857 2.10 0.00 0.00 3.16
4298 5944 4.841443 TGTACGAAGCTTGAGACACTTA 57.159 40.909 2.10 0.00 0.00 2.24
4299 5945 5.386958 TGTACGAAGCTTGAGACACTTAT 57.613 39.130 2.10 0.00 0.00 1.73
4300 5946 5.779922 TGTACGAAGCTTGAGACACTTATT 58.220 37.500 2.10 0.00 0.00 1.40
4301 5947 6.220930 TGTACGAAGCTTGAGACACTTATTT 58.779 36.000 2.10 0.00 0.00 1.40
4302 5948 6.704493 TGTACGAAGCTTGAGACACTTATTTT 59.296 34.615 2.10 0.00 0.00 1.82
4303 5949 5.990408 ACGAAGCTTGAGACACTTATTTTG 58.010 37.500 2.10 0.00 0.00 2.44
4304 5950 5.049405 ACGAAGCTTGAGACACTTATTTTGG 60.049 40.000 2.10 0.00 0.00 3.28
4305 5951 5.617751 CGAAGCTTGAGACACTTATTTTGGG 60.618 44.000 2.10 0.00 0.00 4.12
4306 5952 4.985538 AGCTTGAGACACTTATTTTGGGA 58.014 39.130 0.00 0.00 0.00 4.37
4307 5953 4.762251 AGCTTGAGACACTTATTTTGGGAC 59.238 41.667 0.00 0.00 0.00 4.46
4308 5954 4.378459 GCTTGAGACACTTATTTTGGGACG 60.378 45.833 0.00 0.00 0.00 4.79
4309 5955 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
4310 5956 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
4311 5957 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
4312 5958 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
4313 5959 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
4314 5960 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
4315 5961 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
4316 5962 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
4317 5963 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
4330 5976 4.884744 CGGAGGGAGTATATATGAGTCCAG 59.115 50.000 12.87 1.75 38.05 3.86
4331 5977 5.573914 CGGAGGGAGTATATATGAGTCCAGT 60.574 48.000 12.87 2.90 38.05 4.00
4350 5996 7.827729 AGTCCAGTTGGTTCTATATGGTTTAAC 59.172 37.037 0.00 0.00 36.34 2.01
4406 6052 0.106819 TACTCCCGTCTGTAGAGGGC 60.107 60.000 13.73 0.00 45.91 5.19
4412 6058 1.550976 CCGTCTGTAGAGGGCTTCTTT 59.449 52.381 3.84 0.00 42.28 2.52
4435 6081 7.757941 TTGTGTATTCATTTTCTGGATGACA 57.242 32.000 0.00 0.00 33.51 3.58
4441 6087 6.519679 TTCATTTTCTGGATGACAAGGATG 57.480 37.500 0.00 0.00 33.51 3.51
4580 6226 2.872245 AGTTCCGCATGGATGTAAATCG 59.128 45.455 0.00 0.00 45.91 3.34
4635 6282 2.765108 TTTTTCAGCGTTGCGATCAA 57.235 40.000 0.00 0.00 0.00 2.57
4711 6358 5.312895 TGTGTGTGCCAGTTTCAGTAATAT 58.687 37.500 0.00 0.00 0.00 1.28
4884 6532 8.547967 TCTCTTCAGTATTTTTAACGATGCTT 57.452 30.769 0.00 0.00 0.00 3.91
4904 6552 5.009911 TGCTTATTTCTTCACATGTTGCAGT 59.990 36.000 0.00 0.00 0.00 4.40
5133 6782 2.551032 TCTGTGCATCTGTTTCTGCTTG 59.449 45.455 0.00 0.00 39.16 4.01
5173 6822 3.312421 TGTTAGCTAAGAATTCATGCCGC 59.688 43.478 6.38 2.97 0.00 6.53
5612 7263 3.585990 GTGGCAGCGTGCTGTTGT 61.586 61.111 21.76 0.00 44.28 3.32
5626 7277 0.764890 TGTTGTGGCTAGGTCTTGCT 59.235 50.000 4.63 0.00 0.00 3.91
5651 7302 1.567504 CGTGTCCTCGTGACTTGTTT 58.432 50.000 8.80 0.00 44.75 2.83
5654 7305 2.933906 GTGTCCTCGTGACTTGTTTTCA 59.066 45.455 8.80 0.00 44.75 2.69
5661 7312 4.196193 TCGTGACTTGTTTTCAACTGGAT 58.804 39.130 0.00 0.00 35.77 3.41
5718 7373 2.756691 GACATGGGCATGCTGGCA 60.757 61.111 18.92 0.00 45.76 4.92
5719 7374 2.758327 ACATGGGCATGCTGGCAG 60.758 61.111 18.92 10.94 45.76 4.85
5720 7375 4.221422 CATGGGCATGCTGGCAGC 62.221 66.667 31.91 31.91 45.76 5.25
5750 7405 4.308458 TGAGACGCCGGTTGTGGG 62.308 66.667 1.90 0.00 0.00 4.61
5855 7510 2.047274 ATGACCACGCCAACCTCG 60.047 61.111 0.00 0.00 0.00 4.63
5870 7525 1.227527 CTCGTGTGTGTTGAGGGCA 60.228 57.895 0.00 0.00 0.00 5.36
5895 7550 3.391382 AGTCCCTAGCGCCACCAC 61.391 66.667 2.29 0.00 0.00 4.16
5981 7639 1.153289 CATGTGGCTCCTCTTCCCG 60.153 63.158 0.00 0.00 0.00 5.14
5983 7641 4.475135 GTGGCTCCTCTTCCCGCC 62.475 72.222 0.00 0.00 42.78 6.13
5986 7644 3.483869 GCTCCTCTTCCCGCCCAT 61.484 66.667 0.00 0.00 0.00 4.00
5987 7645 2.507944 CTCCTCTTCCCGCCCATG 59.492 66.667 0.00 0.00 0.00 3.66
5988 7646 3.089874 TCCTCTTCCCGCCCATGG 61.090 66.667 4.14 4.14 0.00 3.66
5989 7647 4.883354 CCTCTTCCCGCCCATGGC 62.883 72.222 6.09 0.58 46.75 4.40
6021 7679 0.974383 TCCGTCAACTTCTTCCTCCC 59.026 55.000 0.00 0.00 0.00 4.30
6063 7721 4.090588 TGGTCCAATCCCGACGGC 62.091 66.667 8.86 0.00 0.00 5.68
6152 7818 2.424379 GGAGGGGTGAACAAAGGAAAGT 60.424 50.000 0.00 0.00 0.00 2.66
6171 7837 0.793617 TGAGGAGGGAGAGGAAACCT 59.206 55.000 0.00 0.00 37.31 3.50
6229 7895 2.802787 GTGCTGACACACACTACTCT 57.197 50.000 4.05 0.00 46.61 3.24
6230 7896 2.667137 GTGCTGACACACACTACTCTC 58.333 52.381 4.05 0.00 46.61 3.20
6231 7897 2.294791 GTGCTGACACACACTACTCTCT 59.705 50.000 4.05 0.00 46.61 3.10
6232 7898 2.554462 TGCTGACACACACTACTCTCTC 59.446 50.000 0.00 0.00 0.00 3.20
6233 7899 2.094957 GCTGACACACACTACTCTCTCC 60.095 54.545 0.00 0.00 0.00 3.71
6234 7900 3.417101 CTGACACACACTACTCTCTCCT 58.583 50.000 0.00 0.00 0.00 3.69
6235 7901 3.823873 CTGACACACACTACTCTCTCCTT 59.176 47.826 0.00 0.00 0.00 3.36
6236 7902 3.821600 TGACACACACTACTCTCTCCTTC 59.178 47.826 0.00 0.00 0.00 3.46
6237 7903 3.158676 ACACACACTACTCTCTCCTTCC 58.841 50.000 0.00 0.00 0.00 3.46
6238 7904 3.157881 CACACACTACTCTCTCCTTCCA 58.842 50.000 0.00 0.00 0.00 3.53
6239 7905 3.057174 CACACACTACTCTCTCCTTCCAC 60.057 52.174 0.00 0.00 0.00 4.02
6240 7906 2.494073 CACACTACTCTCTCCTTCCACC 59.506 54.545 0.00 0.00 0.00 4.61
6241 7907 2.380590 ACACTACTCTCTCCTTCCACCT 59.619 50.000 0.00 0.00 0.00 4.00
6242 7908 3.592427 ACACTACTCTCTCCTTCCACCTA 59.408 47.826 0.00 0.00 0.00 3.08
6243 7909 4.230964 ACACTACTCTCTCCTTCCACCTAT 59.769 45.833 0.00 0.00 0.00 2.57
6244 7910 5.432390 ACACTACTCTCTCCTTCCACCTATA 59.568 44.000 0.00 0.00 0.00 1.31
6245 7911 6.103501 ACACTACTCTCTCCTTCCACCTATAT 59.896 42.308 0.00 0.00 0.00 0.86
6246 7912 7.295196 ACACTACTCTCTCCTTCCACCTATATA 59.705 40.741 0.00 0.00 0.00 0.86
6247 7913 7.827236 CACTACTCTCTCCTTCCACCTATATAG 59.173 44.444 2.46 2.46 0.00 1.31
6260 7926 4.755266 CCTATATAGGGCCTAATGCGTT 57.245 45.455 18.91 1.94 42.61 4.84
6261 7927 5.099042 CCTATATAGGGCCTAATGCGTTT 57.901 43.478 18.91 1.12 42.61 3.60
6262 7928 5.497474 CCTATATAGGGCCTAATGCGTTTT 58.503 41.667 18.91 0.30 42.61 2.43
6263 7929 5.944007 CCTATATAGGGCCTAATGCGTTTTT 59.056 40.000 18.91 0.00 42.61 1.94
6264 7930 5.959618 ATATAGGGCCTAATGCGTTTTTC 57.040 39.130 18.91 0.00 42.61 2.29
6265 7931 1.917872 AGGGCCTAATGCGTTTTTCA 58.082 45.000 2.82 0.00 42.61 2.69
6266 7932 2.243810 AGGGCCTAATGCGTTTTTCAA 58.756 42.857 2.82 0.00 42.61 2.69
6267 7933 2.231235 AGGGCCTAATGCGTTTTTCAAG 59.769 45.455 2.82 0.00 42.61 3.02
6268 7934 2.230266 GGGCCTAATGCGTTTTTCAAGA 59.770 45.455 0.84 0.00 42.61 3.02
6269 7935 3.242518 GGCCTAATGCGTTTTTCAAGAC 58.757 45.455 0.00 0.00 42.61 3.01
6270 7936 3.242518 GCCTAATGCGTTTTTCAAGACC 58.757 45.455 0.00 0.00 0.00 3.85
6271 7937 3.488489 CCTAATGCGTTTTTCAAGACCG 58.512 45.455 0.00 0.00 0.00 4.79
6272 7938 1.766069 AATGCGTTTTTCAAGACCGC 58.234 45.000 0.00 0.00 44.27 5.68
6273 7939 0.039527 ATGCGTTTTTCAAGACCGCC 60.040 50.000 0.00 0.00 43.44 6.13
6274 7940 1.098712 TGCGTTTTTCAAGACCGCCT 61.099 50.000 0.00 0.00 43.44 5.52
6275 7941 0.030235 GCGTTTTTCAAGACCGCCTT 59.970 50.000 0.00 0.00 38.52 4.35
6276 7942 1.535226 GCGTTTTTCAAGACCGCCTTT 60.535 47.619 0.00 0.00 38.52 3.11
6277 7943 2.116366 CGTTTTTCAAGACCGCCTTTG 58.884 47.619 0.00 0.00 31.42 2.77
6278 7944 2.223386 CGTTTTTCAAGACCGCCTTTGA 60.223 45.455 0.00 0.00 31.42 2.69
6279 7945 3.113322 GTTTTTCAAGACCGCCTTTGAC 58.887 45.455 0.00 0.00 31.42 3.18
6280 7946 2.341846 TTTCAAGACCGCCTTTGACT 57.658 45.000 0.00 0.00 31.42 3.41
6281 7947 3.478857 TTTCAAGACCGCCTTTGACTA 57.521 42.857 0.00 0.00 31.42 2.59
6282 7948 3.695830 TTCAAGACCGCCTTTGACTAT 57.304 42.857 0.00 0.00 31.42 2.12
6283 7949 3.695830 TCAAGACCGCCTTTGACTATT 57.304 42.857 0.00 0.00 31.42 1.73
6284 7950 3.334691 TCAAGACCGCCTTTGACTATTG 58.665 45.455 0.00 0.00 31.42 1.90
6285 7951 3.007506 TCAAGACCGCCTTTGACTATTGA 59.992 43.478 0.00 0.00 31.42 2.57
6286 7952 2.973945 AGACCGCCTTTGACTATTGAC 58.026 47.619 0.00 0.00 0.00 3.18
6287 7953 2.301870 AGACCGCCTTTGACTATTGACA 59.698 45.455 0.00 0.00 0.00 3.58
6288 7954 3.071479 GACCGCCTTTGACTATTGACAA 58.929 45.455 0.00 0.00 0.00 3.18
6289 7955 3.074412 ACCGCCTTTGACTATTGACAAG 58.926 45.455 0.00 0.00 0.00 3.16
6290 7956 3.244422 ACCGCCTTTGACTATTGACAAGA 60.244 43.478 0.00 0.00 0.00 3.02
6291 7957 3.941483 CCGCCTTTGACTATTGACAAGAT 59.059 43.478 0.00 0.00 0.00 2.40
6292 7958 4.396166 CCGCCTTTGACTATTGACAAGATT 59.604 41.667 0.00 0.00 0.00 2.40
6293 7959 5.584649 CCGCCTTTGACTATTGACAAGATTA 59.415 40.000 0.00 0.00 0.00 1.75
6294 7960 6.093495 CCGCCTTTGACTATTGACAAGATTAA 59.907 38.462 0.00 0.00 0.00 1.40
6295 7961 7.201732 CCGCCTTTGACTATTGACAAGATTAAT 60.202 37.037 0.00 0.00 0.00 1.40
6296 7962 8.826710 CGCCTTTGACTATTGACAAGATTAATA 58.173 33.333 0.00 0.00 0.00 0.98
6338 8004 8.627208 ATGTGAAAATTATATCATCGGAAGCT 57.373 30.769 0.00 0.00 0.00 3.74
6339 8005 8.087982 TGTGAAAATTATATCATCGGAAGCTC 57.912 34.615 0.00 0.00 0.00 4.09
6340 8006 7.173218 TGTGAAAATTATATCATCGGAAGCTCC 59.827 37.037 0.00 0.00 0.00 4.70
6341 8007 7.389053 GTGAAAATTATATCATCGGAAGCTCCT 59.611 37.037 0.00 0.00 33.30 3.69
6342 8008 7.939039 TGAAAATTATATCATCGGAAGCTCCTT 59.061 33.333 0.00 0.00 33.30 3.36
6343 8009 8.697507 AAAATTATATCATCGGAAGCTCCTTT 57.302 30.769 0.00 0.00 33.30 3.11
6344 8010 7.913674 AATTATATCATCGGAAGCTCCTTTC 57.086 36.000 0.00 0.00 33.30 2.62
6345 8011 4.963318 ATATCATCGGAAGCTCCTTTCA 57.037 40.909 0.00 0.00 33.30 2.69
6346 8012 2.386661 TCATCGGAAGCTCCTTTCAC 57.613 50.000 0.00 0.00 33.30 3.18
6347 8013 1.623311 TCATCGGAAGCTCCTTTCACA 59.377 47.619 0.00 0.00 33.30 3.58
6348 8014 2.237143 TCATCGGAAGCTCCTTTCACAT 59.763 45.455 0.00 0.00 33.30 3.21
6349 8015 3.450817 TCATCGGAAGCTCCTTTCACATA 59.549 43.478 0.00 0.00 33.30 2.29
6350 8016 3.247006 TCGGAAGCTCCTTTCACATAC 57.753 47.619 0.00 0.00 33.30 2.39
6351 8017 1.927174 CGGAAGCTCCTTTCACATACG 59.073 52.381 0.00 0.00 33.30 3.06
6352 8018 2.416836 CGGAAGCTCCTTTCACATACGA 60.417 50.000 0.00 0.00 33.30 3.43
6353 8019 3.596214 GGAAGCTCCTTTCACATACGAA 58.404 45.455 0.00 0.00 32.53 3.85
6354 8020 4.192317 GGAAGCTCCTTTCACATACGAAT 58.808 43.478 0.00 0.00 32.53 3.34
6355 8021 4.636206 GGAAGCTCCTTTCACATACGAATT 59.364 41.667 0.00 0.00 32.53 2.17
6356 8022 5.123979 GGAAGCTCCTTTCACATACGAATTT 59.876 40.000 0.00 0.00 32.53 1.82
6357 8023 5.551760 AGCTCCTTTCACATACGAATTTG 57.448 39.130 0.00 0.00 0.00 2.32
6358 8024 5.245531 AGCTCCTTTCACATACGAATTTGA 58.754 37.500 0.00 0.00 0.00 2.69
6359 8025 5.122396 AGCTCCTTTCACATACGAATTTGAC 59.878 40.000 0.00 0.00 0.00 3.18
6360 8026 5.673818 GCTCCTTTCACATACGAATTTGACC 60.674 44.000 0.00 0.00 0.00 4.02
6361 8027 4.390603 TCCTTTCACATACGAATTTGACCG 59.609 41.667 0.00 0.00 0.00 4.79
6362 8028 4.153475 CCTTTCACATACGAATTTGACCGT 59.847 41.667 0.00 0.00 42.15 4.83
6363 8029 5.349270 CCTTTCACATACGAATTTGACCGTA 59.651 40.000 0.00 0.00 43.97 4.02
6368 8034 1.717194 ACGAATTTGACCGTATGCGT 58.283 45.000 1.69 0.00 37.23 5.24
6369 8035 2.070783 ACGAATTTGACCGTATGCGTT 58.929 42.857 1.69 0.00 32.19 4.84
6370 8036 2.159761 ACGAATTTGACCGTATGCGTTG 60.160 45.455 1.69 0.00 32.19 4.10
6371 8037 2.159761 CGAATTTGACCGTATGCGTTGT 60.160 45.455 1.69 0.00 36.15 3.32
6372 8038 2.892373 ATTTGACCGTATGCGTTGTG 57.108 45.000 1.69 0.00 36.15 3.33
6373 8039 1.584175 TTTGACCGTATGCGTTGTGT 58.416 45.000 1.69 0.00 36.15 3.72
6374 8040 2.435533 TTGACCGTATGCGTTGTGTA 57.564 45.000 1.69 0.00 36.15 2.90
6375 8041 2.435533 TGACCGTATGCGTTGTGTAA 57.564 45.000 1.69 0.00 36.15 2.41
6376 8042 2.330286 TGACCGTATGCGTTGTGTAAG 58.670 47.619 1.69 0.00 36.15 2.34
6377 8043 2.288334 TGACCGTATGCGTTGTGTAAGT 60.288 45.455 1.69 0.00 36.15 2.24
6378 8044 2.733026 GACCGTATGCGTTGTGTAAGTT 59.267 45.455 1.69 0.00 36.15 2.66
6379 8045 2.477375 ACCGTATGCGTTGTGTAAGTTG 59.523 45.455 1.69 0.00 36.15 3.16
6380 8046 2.492001 CGTATGCGTTGTGTAAGTTGC 58.508 47.619 0.00 0.00 0.00 4.17
6381 8047 2.096664 CGTATGCGTTGTGTAAGTTGCA 60.097 45.455 0.00 0.00 36.69 4.08
6382 8048 3.424302 CGTATGCGTTGTGTAAGTTGCAT 60.424 43.478 0.00 2.88 44.45 3.96
6383 8049 2.397777 TGCGTTGTGTAAGTTGCATG 57.602 45.000 0.00 0.00 0.00 4.06
6384 8050 1.673400 TGCGTTGTGTAAGTTGCATGT 59.327 42.857 0.00 0.00 0.00 3.21
6385 8051 2.286713 TGCGTTGTGTAAGTTGCATGTC 60.287 45.455 0.00 0.00 0.00 3.06
6386 8052 2.559872 CGTTGTGTAAGTTGCATGTCG 58.440 47.619 0.00 0.00 0.00 4.35
6387 8053 2.033236 CGTTGTGTAAGTTGCATGTCGT 60.033 45.455 0.00 0.00 0.00 4.34
6388 8054 3.182772 CGTTGTGTAAGTTGCATGTCGTA 59.817 43.478 0.00 0.00 0.00 3.43
6389 8055 4.143200 CGTTGTGTAAGTTGCATGTCGTAT 60.143 41.667 0.00 0.00 0.00 3.06
6390 8056 5.061187 CGTTGTGTAAGTTGCATGTCGTATA 59.939 40.000 0.00 0.00 0.00 1.47
6391 8057 6.237728 CGTTGTGTAAGTTGCATGTCGTATAT 60.238 38.462 0.00 0.00 0.00 0.86
6392 8058 7.461107 GTTGTGTAAGTTGCATGTCGTATATT 58.539 34.615 0.00 0.00 0.00 1.28
6393 8059 8.597227 GTTGTGTAAGTTGCATGTCGTATATTA 58.403 33.333 0.00 0.00 0.00 0.98
6394 8060 8.880878 TGTGTAAGTTGCATGTCGTATATTAT 57.119 30.769 0.00 0.00 0.00 1.28
6395 8061 9.320352 TGTGTAAGTTGCATGTCGTATATTATT 57.680 29.630 0.00 0.00 0.00 1.40
6396 8062 9.580916 GTGTAAGTTGCATGTCGTATATTATTG 57.419 33.333 0.00 0.00 0.00 1.90
6397 8063 8.279800 TGTAAGTTGCATGTCGTATATTATTGC 58.720 33.333 0.00 0.00 0.00 3.56
6398 8064 7.496529 AAGTTGCATGTCGTATATTATTGCT 57.503 32.000 0.00 0.00 0.00 3.91
6399 8065 6.891624 AGTTGCATGTCGTATATTATTGCTG 58.108 36.000 0.00 0.00 0.00 4.41
6400 8066 6.483307 AGTTGCATGTCGTATATTATTGCTGT 59.517 34.615 0.00 0.00 0.00 4.40
6401 8067 7.655732 AGTTGCATGTCGTATATTATTGCTGTA 59.344 33.333 0.00 0.00 0.00 2.74
6402 8068 7.954788 TGCATGTCGTATATTATTGCTGTAA 57.045 32.000 0.00 0.00 0.00 2.41
6403 8069 7.792925 TGCATGTCGTATATTATTGCTGTAAC 58.207 34.615 0.00 0.00 0.00 2.50
6404 8070 7.439655 TGCATGTCGTATATTATTGCTGTAACA 59.560 33.333 0.00 0.00 0.00 2.41
6405 8071 8.443160 GCATGTCGTATATTATTGCTGTAACAT 58.557 33.333 0.00 0.00 0.00 2.71
6409 8075 9.594038 GTCGTATATTATTGCTGTAACATTTGG 57.406 33.333 0.00 0.00 0.00 3.28
6410 8076 9.332502 TCGTATATTATTGCTGTAACATTTGGT 57.667 29.630 0.00 0.00 0.00 3.67
6411 8077 9.594038 CGTATATTATTGCTGTAACATTTGGTC 57.406 33.333 0.00 0.00 0.00 4.02
6415 8081 8.761575 ATTATTGCTGTAACATTTGGTCAAAG 57.238 30.769 2.55 0.00 33.32 2.77
6416 8082 5.590530 TTGCTGTAACATTTGGTCAAAGT 57.409 34.783 2.55 0.00 33.32 2.66
6417 8083 5.590530 TGCTGTAACATTTGGTCAAAGTT 57.409 34.783 2.55 8.59 33.32 2.66
6418 8084 6.701145 TGCTGTAACATTTGGTCAAAGTTA 57.299 33.333 2.55 7.83 33.32 2.24
6419 8085 6.734137 TGCTGTAACATTTGGTCAAAGTTAG 58.266 36.000 13.43 9.25 33.32 2.34
6420 8086 5.629435 GCTGTAACATTTGGTCAAAGTTAGC 59.371 40.000 13.43 12.78 33.32 3.09
6421 8087 6.079424 TGTAACATTTGGTCAAAGTTAGCC 57.921 37.500 13.43 7.94 33.32 3.93
6422 8088 5.830991 TGTAACATTTGGTCAAAGTTAGCCT 59.169 36.000 13.43 0.00 33.32 4.58
6423 8089 5.453567 AACATTTGGTCAAAGTTAGCCTC 57.546 39.130 2.55 0.00 33.32 4.70
6424 8090 4.469657 ACATTTGGTCAAAGTTAGCCTCA 58.530 39.130 2.55 0.00 33.32 3.86
6425 8091 4.892934 ACATTTGGTCAAAGTTAGCCTCAA 59.107 37.500 2.55 0.00 33.32 3.02
6426 8092 5.362430 ACATTTGGTCAAAGTTAGCCTCAAA 59.638 36.000 2.55 0.00 33.32 2.69
6427 8093 5.923733 TTTGGTCAAAGTTAGCCTCAAAA 57.076 34.783 0.00 0.00 0.00 2.44
6428 8094 5.923733 TTGGTCAAAGTTAGCCTCAAAAA 57.076 34.783 0.00 0.00 0.00 1.94
6449 8115 6.368779 AAAATGCGTTAGGCCCTATATAGA 57.631 37.500 11.53 0.00 42.61 1.98
6450 8116 6.561519 AAATGCGTTAGGCCCTATATAGAT 57.438 37.500 11.53 0.00 42.61 1.98
6451 8117 5.537300 ATGCGTTAGGCCCTATATAGATG 57.463 43.478 11.53 3.39 42.61 2.90
6452 8118 3.704566 TGCGTTAGGCCCTATATAGATGG 59.295 47.826 11.53 6.04 42.61 3.51
6453 8119 3.958798 GCGTTAGGCCCTATATAGATGGA 59.041 47.826 11.53 0.00 34.80 3.41
6454 8120 4.404715 GCGTTAGGCCCTATATAGATGGAA 59.595 45.833 11.53 0.00 34.80 3.53
6455 8121 5.452077 GCGTTAGGCCCTATATAGATGGAAG 60.452 48.000 11.53 0.00 34.80 3.46
6456 8122 5.069251 CGTTAGGCCCTATATAGATGGAAGG 59.931 48.000 11.53 3.94 0.00 3.46
6457 8123 4.994411 AGGCCCTATATAGATGGAAGGA 57.006 45.455 11.53 0.00 0.00 3.36
6458 8124 4.889780 AGGCCCTATATAGATGGAAGGAG 58.110 47.826 11.53 0.00 0.00 3.69
6459 8125 3.970640 GGCCCTATATAGATGGAAGGAGG 59.029 52.174 11.53 1.87 0.00 4.30
6460 8126 3.970640 GCCCTATATAGATGGAAGGAGGG 59.029 52.174 11.53 3.52 44.52 4.30
6461 8127 4.327010 GCCCTATATAGATGGAAGGAGGGA 60.327 50.000 11.53 0.00 44.48 4.20
6462 8128 5.463154 CCCTATATAGATGGAAGGAGGGAG 58.537 50.000 11.53 0.00 44.48 4.30
6535 8202 3.370633 GGGAACAGAGGGAGTATTGAACC 60.371 52.174 0.00 0.00 0.00 3.62
6552 8219 9.595823 GTATTGAACCTTTAGTGTCTAATAGCA 57.404 33.333 0.00 0.00 0.00 3.49
6624 8291 2.525381 TTTTTGCGGGGCCCATGT 60.525 55.556 26.86 0.00 0.00 3.21
6625 8292 2.143419 TTTTTGCGGGGCCCATGTT 61.143 52.632 26.86 0.00 0.00 2.71
6626 8293 1.700042 TTTTTGCGGGGCCCATGTTT 61.700 50.000 26.86 0.00 0.00 2.83
6627 8294 1.700042 TTTTGCGGGGCCCATGTTTT 61.700 50.000 26.86 0.00 0.00 2.43
6628 8295 1.700042 TTTGCGGGGCCCATGTTTTT 61.700 50.000 26.86 0.00 0.00 1.94
6798 8465 6.375455 TCATTCTTCCCTGAATCAGCTTTTAC 59.625 38.462 4.40 0.00 34.77 2.01
6875 8542 7.895975 ATTCTGAAGCTTTTTAATTCCTTGC 57.104 32.000 0.00 0.00 0.00 4.01
7127 8794 2.229784 CCCACTTGCCATTCTCAAAGTC 59.770 50.000 0.00 0.00 0.00 3.01
7171 8839 8.055754 GCAAGCATTTGGAATGGATATATCCAC 61.056 40.741 32.22 21.57 45.52 4.02
7299 8967 5.851047 AATTTAGTTAAGTTGGGTCGTCG 57.149 39.130 0.00 0.00 0.00 5.12
7309 8977 2.509336 GGTCGTCGGCTCACATGG 60.509 66.667 0.00 0.00 0.00 3.66
7545 9218 1.330521 GTGTTCGGTCATTATGCGCAT 59.669 47.619 28.23 28.23 0.00 4.73
7709 9382 4.037923 AGAATTGTGTAGTTGGTGCTTTGG 59.962 41.667 0.00 0.00 0.00 3.28
7740 9413 3.610911 GTTTGCTGTAGCCTGTAGGATT 58.389 45.455 1.17 0.00 41.18 3.01
7791 9464 9.859427 CACCTCAATTTTGATACATTGTGTTAT 57.141 29.630 0.00 0.00 36.46 1.89
7838 9511 6.149633 GGCTATGTTGTTCAACTTGTTTAGG 58.850 40.000 15.18 1.54 0.00 2.69
7840 9513 6.856426 GCTATGTTGTTCAACTTGTTTAGGTC 59.144 38.462 15.18 0.00 0.00 3.85
8013 9686 1.892474 TGAAATAACAAGGCCTGCCAC 59.108 47.619 5.69 0.00 38.92 5.01
8082 9762 3.006537 AGCTGACGTCAGTTTTTAGCCTA 59.993 43.478 38.11 5.38 45.45 3.93
8175 9856 2.623878 TTCCAGCAAACTACGGAACA 57.376 45.000 0.00 0.00 32.61 3.18
8180 9861 1.602377 AGCAAACTACGGAACAGTTGC 59.398 47.619 0.00 0.00 36.38 4.17
8184 9865 4.606961 CAAACTACGGAACAGTTGCATTT 58.393 39.130 5.56 0.00 36.38 2.32
8199 9880 3.601435 TGCATTTTGGGCATGAATCTTG 58.399 40.909 0.00 0.00 36.11 3.02
8208 9889 0.248743 CATGAATCTTGGCGCGCATT 60.249 50.000 34.42 23.27 0.00 3.56
8277 9958 2.185238 GTCGCTCAGACTAGCACCT 58.815 57.895 0.00 0.00 46.13 4.00
8278 9959 0.099791 GTCGCTCAGACTAGCACCTC 59.900 60.000 0.00 0.00 46.13 3.85
8282 9964 2.103143 CAGACTAGCACCTCCGCG 59.897 66.667 0.00 0.00 36.85 6.46
8304 9986 4.754667 GGAGTTGCCGTCCCCGTC 62.755 72.222 0.00 0.00 0.00 4.79
8320 10002 4.325304 TCGCGCAACCACGACGTA 62.325 61.111 8.75 0.00 35.28 3.57
8323 10005 2.377310 GCGCAACCACGACGTACAT 61.377 57.895 0.30 0.00 34.06 2.29
8329 10011 0.664761 ACCACGACGTACATATCCCG 59.335 55.000 0.00 0.00 0.00 5.14
8330 10012 0.664761 CCACGACGTACATATCCCGT 59.335 55.000 0.00 0.00 37.56 5.28
8331 10013 1.598676 CCACGACGTACATATCCCGTG 60.599 57.143 13.30 13.30 44.54 4.94
8332 10014 1.064505 CACGACGTACATATCCCGTGT 59.935 52.381 12.35 0.00 41.38 4.49
8333 10015 1.331756 ACGACGTACATATCCCGTGTC 59.668 52.381 0.00 0.00 34.51 3.67
8334 10016 1.331447 CGACGTACATATCCCGTGTCA 59.669 52.381 0.00 0.00 34.51 3.58
8335 10017 2.724349 GACGTACATATCCCGTGTCAC 58.276 52.381 0.00 0.00 34.51 3.67
8336 10018 1.406539 ACGTACATATCCCGTGTCACC 59.593 52.381 0.00 0.00 32.86 4.02
8337 10019 1.406180 CGTACATATCCCGTGTCACCA 59.594 52.381 0.00 0.00 0.00 4.17
8338 10020 2.543031 CGTACATATCCCGTGTCACCAG 60.543 54.545 0.00 0.00 0.00 4.00
8339 10021 0.178068 ACATATCCCGTGTCACCAGC 59.822 55.000 0.00 0.00 0.00 4.85
8340 10022 0.532862 CATATCCCGTGTCACCAGCC 60.533 60.000 0.00 0.00 0.00 4.85
8341 10023 0.691078 ATATCCCGTGTCACCAGCCT 60.691 55.000 0.00 0.00 0.00 4.58
8342 10024 1.613317 TATCCCGTGTCACCAGCCTG 61.613 60.000 0.00 0.00 0.00 4.85
8343 10025 4.704833 CCCGTGTCACCAGCCTGG 62.705 72.222 9.83 9.83 45.02 4.45
8353 10035 1.826024 CCAGCCTGGTAGCTAGTGG 59.174 63.158 1.39 0.00 42.61 4.00
8354 10036 1.144936 CAGCCTGGTAGCTAGTGGC 59.855 63.158 18.58 18.58 42.61 5.01
8374 10056 4.003788 CACGCGGTCCTCCCTGTT 62.004 66.667 12.47 0.00 0.00 3.16
8375 10057 4.003788 ACGCGGTCCTCCCTGTTG 62.004 66.667 12.47 0.00 0.00 3.33
8376 10058 3.691342 CGCGGTCCTCCCTGTTGA 61.691 66.667 0.00 0.00 0.00 3.18
8377 10059 2.047179 GCGGTCCTCCCTGTTGAC 60.047 66.667 0.00 0.00 0.00 3.18
8378 10060 2.879233 GCGGTCCTCCCTGTTGACA 61.879 63.158 0.00 0.00 0.00 3.58
8379 10061 1.752198 CGGTCCTCCCTGTTGACAA 59.248 57.895 0.00 0.00 0.00 3.18
8380 10062 0.320771 CGGTCCTCCCTGTTGACAAG 60.321 60.000 0.00 0.00 0.00 3.16
8381 10063 0.036875 GGTCCTCCCTGTTGACAAGG 59.963 60.000 0.00 0.00 0.00 3.61
8382 10064 1.056660 GTCCTCCCTGTTGACAAGGA 58.943 55.000 1.77 1.77 35.33 3.36
8384 10066 3.239861 CTCCCTGTTGACAAGGAGC 57.760 57.895 14.12 0.00 44.77 4.70
8385 10067 0.397941 CTCCCTGTTGACAAGGAGCA 59.602 55.000 14.12 0.00 44.77 4.26
8386 10068 0.108585 TCCCTGTTGACAAGGAGCAC 59.891 55.000 0.00 0.00 31.82 4.40
8387 10069 0.890996 CCCTGTTGACAAGGAGCACC 60.891 60.000 0.00 0.00 28.75 5.01
8388 10070 0.890996 CCTGTTGACAAGGAGCACCC 60.891 60.000 0.00 0.00 36.73 4.61
8389 10071 1.227823 TGTTGACAAGGAGCACCCG 60.228 57.895 0.00 0.00 40.87 5.28
8390 10072 1.227853 GTTGACAAGGAGCACCCGT 60.228 57.895 0.00 0.00 40.87 5.28
8391 10073 1.070786 TTGACAAGGAGCACCCGTC 59.929 57.895 11.87 11.87 40.87 4.79
8392 10074 2.047179 GACAAGGAGCACCCGTCC 60.047 66.667 8.61 0.00 40.87 4.79
8394 10076 2.266055 CAAGGAGCACCCGTCCTC 59.734 66.667 0.00 0.00 44.17 3.71
8395 10077 3.003763 AAGGAGCACCCGTCCTCC 61.004 66.667 0.00 0.00 44.17 4.30
8406 10088 3.782443 GTCCTCCCCGCCATCGTT 61.782 66.667 0.00 0.00 0.00 3.85
8407 10089 3.467226 TCCTCCCCGCCATCGTTC 61.467 66.667 0.00 0.00 0.00 3.95
8408 10090 3.781307 CCTCCCCGCCATCGTTCA 61.781 66.667 0.00 0.00 0.00 3.18
8409 10091 2.267642 CTCCCCGCCATCGTTCAA 59.732 61.111 0.00 0.00 0.00 2.69
8410 10092 1.815421 CTCCCCGCCATCGTTCAAG 60.815 63.158 0.00 0.00 0.00 3.02
8411 10093 3.508840 CCCCGCCATCGTTCAAGC 61.509 66.667 0.00 0.00 0.00 4.01
8412 10094 2.436646 CCCGCCATCGTTCAAGCT 60.437 61.111 0.00 0.00 0.00 3.74
8413 10095 2.753966 CCCGCCATCGTTCAAGCTG 61.754 63.158 0.00 0.00 0.00 4.24
8414 10096 2.099062 CGCCATCGTTCAAGCTGC 59.901 61.111 0.00 0.00 0.00 5.25
8415 10097 2.486966 GCCATCGTTCAAGCTGCC 59.513 61.111 0.00 0.00 0.00 4.85
8416 10098 3.056313 GCCATCGTTCAAGCTGCCC 62.056 63.158 0.00 0.00 0.00 5.36
8417 10099 2.409870 CCATCGTTCAAGCTGCCCC 61.410 63.158 0.00 0.00 0.00 5.80
8418 10100 2.436646 ATCGTTCAAGCTGCCCCG 60.437 61.111 0.00 0.00 0.00 5.73
8419 10101 3.254024 ATCGTTCAAGCTGCCCCGT 62.254 57.895 0.00 0.00 0.00 5.28
8420 10102 3.726517 CGTTCAAGCTGCCCCGTG 61.727 66.667 0.00 0.00 0.00 4.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
105 367 3.127376 CGTGCATCATCCACTGAAAATGA 59.873 43.478 0.00 0.00 37.44 2.57
130 404 9.829507 CTAGGGAATATATTTATGCAAGAGAGG 57.170 37.037 0.00 0.00 0.00 3.69
152 426 4.202367 GGAACCATCATACAGGAACCTAGG 60.202 50.000 7.41 7.41 0.00 3.02
153 427 4.501571 CGGAACCATCATACAGGAACCTAG 60.502 50.000 0.00 0.00 0.00 3.02
155 429 2.170607 CGGAACCATCATACAGGAACCT 59.829 50.000 0.00 0.00 0.00 3.50
160 434 2.158900 AGAAGCGGAACCATCATACAGG 60.159 50.000 0.00 0.00 0.00 4.00
175 449 6.851222 ACAGATATTTTCACCATAGAAGCG 57.149 37.500 0.00 0.00 0.00 4.68
205 479 4.825546 AGTATGCTTGCTTGTCATATGC 57.174 40.909 0.00 0.00 0.00 3.14
263 537 2.227865 GCTACATTAGCCTCTCCTCTCG 59.772 54.545 0.00 0.00 45.95 4.04
322 599 3.686016 TGCCTGAACCAAGGTATTTCTC 58.314 45.455 0.00 0.00 39.75 2.87
341 618 1.035932 ACAGATTGCCATCAGCCTGC 61.036 55.000 0.01 0.00 42.71 4.85
442 719 5.046014 AGAGGCATACACCATCTCAATATCC 60.046 44.000 0.00 0.00 0.00 2.59
520 798 4.279420 TGACGAGATCTGGACATGGAATAG 59.721 45.833 12.14 0.00 0.00 1.73
544 822 3.856521 CAGAGTTTGCTGACATAGACGAG 59.143 47.826 0.00 0.00 38.14 4.18
624 902 6.881065 TGGACCTTTGATCTAATTCTCACAAG 59.119 38.462 0.00 0.00 0.00 3.16
631 909 7.826744 AGAGAAGTTGGACCTTTGATCTAATTC 59.173 37.037 0.00 0.00 0.00 2.17
645 924 5.186996 TGCATTCAAAAGAGAAGTTGGAC 57.813 39.130 0.00 0.00 0.00 4.02
665 944 3.685058 GCTTGGAACTTTGATCGTATGC 58.315 45.455 0.00 0.00 0.00 3.14
715 2272 2.231478 TCGCTGGAAGAAAGACGAGATT 59.769 45.455 0.00 0.00 34.07 2.40
743 2316 1.053424 TACAAGCGGGGTTTCACTCT 58.947 50.000 0.00 0.00 0.00 3.24
802 2380 2.010145 ACATGCAGGCTGTAGTAACG 57.990 50.000 17.16 2.12 0.00 3.18
818 2396 1.546589 TAGGGGTGGTTCGCGAACAT 61.547 55.000 42.35 26.03 42.85 2.71
821 2399 2.162338 CTGTAGGGGTGGTTCGCGAA 62.162 60.000 19.38 19.38 0.00 4.70
854 2437 2.380571 GAAACCAAAGCCCCTCCCCA 62.381 60.000 0.00 0.00 0.00 4.96
889 2472 3.423154 GGGTTTGCGTGCGGAGAG 61.423 66.667 0.00 0.00 0.00 3.20
1135 2718 3.063084 GGAGACGACGAGCCTGGT 61.063 66.667 0.00 0.00 0.00 4.00
1227 2815 3.397317 TCGCATCGCATCGCATCG 61.397 61.111 0.00 0.00 0.00 3.84
1348 2936 0.163788 CACGATGCAACAAGGTCGAC 59.836 55.000 7.13 7.13 37.51 4.20
1410 2998 3.748083 TCCCAATCTCAAGCTATCATGC 58.252 45.455 0.00 0.00 0.00 4.06
1748 3346 6.968263 TTGTGTTAAATCCATCTGAAACCA 57.032 33.333 0.00 0.00 0.00 3.67
1749 3347 6.868339 CCTTTGTGTTAAATCCATCTGAAACC 59.132 38.462 0.00 0.00 0.00 3.27
1777 3375 4.337763 GTTGAAGACGATATGCTTGCAAG 58.662 43.478 22.44 22.44 0.00 4.01
1873 3471 6.146673 GGAAATGCAGGAAAAACAAAGAGATG 59.853 38.462 0.00 0.00 0.00 2.90
1993 3591 0.246086 TTCGCACCATGGAAAATGCC 59.754 50.000 21.47 1.85 34.49 4.40
2168 3766 2.880268 TCTGAGGAACACTGTGCAAATG 59.120 45.455 7.90 0.00 0.00 2.32
2230 3829 2.163613 CGGCTCAACAATTTTACCTCCC 59.836 50.000 0.00 0.00 0.00 4.30
2243 3842 1.333619 TCAAGCAGAAAACGGCTCAAC 59.666 47.619 0.00 0.00 40.01 3.18
2249 3848 1.600413 GCAGGTTCAAGCAGAAAACGG 60.600 52.381 0.00 0.00 38.13 4.44
2278 3877 7.611213 ACAGCAAAGTGAACTGGTATAATAC 57.389 36.000 0.00 0.00 35.70 1.89
2279 3878 8.630054 AAACAGCAAAGTGAACTGGTATAATA 57.370 30.769 0.00 0.00 35.70 0.98
2280 3879 7.230510 TGAAACAGCAAAGTGAACTGGTATAAT 59.769 33.333 0.00 0.00 35.70 1.28
2281 3880 6.544197 TGAAACAGCAAAGTGAACTGGTATAA 59.456 34.615 0.00 0.00 35.70 0.98
2282 3881 6.058833 TGAAACAGCAAAGTGAACTGGTATA 58.941 36.000 0.00 0.00 35.70 1.47
2297 3912 5.734220 GCAGAAACAAATCTCTGAAACAGCA 60.734 40.000 3.32 0.00 41.38 4.41
2398 4014 5.856156 TGGTGCTCAATGTCAATGAAAATT 58.144 33.333 0.00 0.00 0.00 1.82
2440 4056 5.566230 GCCATGCAGAAAGGGATTTATCATC 60.566 44.000 0.00 0.00 0.00 2.92
2475 4091 4.997565 TGAATTACTTAAAGCCATGCAGC 58.002 39.130 0.00 0.00 0.00 5.25
2545 4181 2.909244 CGCAGCTATACGAGAAATACCG 59.091 50.000 0.00 0.00 0.00 4.02
2633 4273 0.947244 AAGAGGAAACTTGTGCAGCG 59.053 50.000 0.00 0.00 44.43 5.18
2636 4276 6.151985 TGTTTAAAGAAGAGGAAACTTGTGCA 59.848 34.615 0.00 0.00 44.43 4.57
2704 4345 9.845740 ATGTTGGTCATATACAGCTAAATACAA 57.154 29.630 0.00 0.00 34.67 2.41
2719 4364 4.157656 GCAGGCAAGTAAATGTTGGTCATA 59.842 41.667 0.00 0.00 35.48 2.15
2768 4413 6.412072 GCATATTTCTGCGACAAATCAGTAAC 59.588 38.462 0.00 0.00 31.49 2.50
2781 4426 4.031418 TGTTCCATTGCATATTTCTGCG 57.969 40.909 0.00 0.00 45.30 5.18
2851 4496 2.369394 GAGAATGGGAATGGCGAGTTT 58.631 47.619 0.00 0.00 0.00 2.66
3170 4815 0.106894 GGAGCCCAGAAATAGGACCG 59.893 60.000 0.00 0.00 0.00 4.79
3257 4902 2.923121 AGAAAAGAAGCAGCACAGTCA 58.077 42.857 0.00 0.00 0.00 3.41
3349 4994 1.133253 CATCAACGAAGGCTGCACG 59.867 57.895 0.50 6.77 0.00 5.34
3539 5184 8.575649 TTTGTAGGAATCTTTAAGAACCATCC 57.424 34.615 18.26 14.08 30.72 3.51
3554 5199 3.091633 AGCAGCACCATTTGTAGGAAT 57.908 42.857 0.00 0.00 0.00 3.01
3593 5238 1.938585 TCAGTTGTCCAGGTAGAGGG 58.061 55.000 0.00 0.00 0.00 4.30
4223 5869 2.238898 ACTTATTTTGGGACGGAGGGAG 59.761 50.000 0.00 0.00 0.00 4.30
4224 5870 2.026636 CACTTATTTTGGGACGGAGGGA 60.027 50.000 0.00 0.00 0.00 4.20
4225 5871 2.290705 ACACTTATTTTGGGACGGAGGG 60.291 50.000 0.00 0.00 0.00 4.30
4226 5872 3.007635 GACACTTATTTTGGGACGGAGG 58.992 50.000 0.00 0.00 0.00 4.30
4227 5873 3.933332 GAGACACTTATTTTGGGACGGAG 59.067 47.826 0.00 0.00 0.00 4.63
4228 5874 3.325425 TGAGACACTTATTTTGGGACGGA 59.675 43.478 0.00 0.00 0.00 4.69
4229 5875 3.670625 TGAGACACTTATTTTGGGACGG 58.329 45.455 0.00 0.00 0.00 4.79
4230 5876 4.755123 AGTTGAGACACTTATTTTGGGACG 59.245 41.667 0.00 0.00 0.00 4.79
4231 5877 6.635030 AAGTTGAGACACTTATTTTGGGAC 57.365 37.500 0.00 0.00 35.10 4.46
4232 5878 6.605594 ACAAAGTTGAGACACTTATTTTGGGA 59.394 34.615 0.00 0.00 35.87 4.37
4233 5879 6.805713 ACAAAGTTGAGACACTTATTTTGGG 58.194 36.000 0.00 0.00 35.87 4.12
4234 5880 8.621286 AGTACAAAGTTGAGACACTTATTTTGG 58.379 33.333 0.00 0.00 35.87 3.28
4237 5883 8.989980 GCTAGTACAAAGTTGAGACACTTATTT 58.010 33.333 0.00 0.00 35.87 1.40
4238 5884 8.368668 AGCTAGTACAAAGTTGAGACACTTATT 58.631 33.333 0.00 0.00 35.87 1.40
4239 5885 7.897864 AGCTAGTACAAAGTTGAGACACTTAT 58.102 34.615 0.00 0.00 35.87 1.73
4240 5886 7.230913 AGAGCTAGTACAAAGTTGAGACACTTA 59.769 37.037 0.00 0.00 35.87 2.24
4241 5887 6.041069 AGAGCTAGTACAAAGTTGAGACACTT 59.959 38.462 0.00 0.00 38.74 3.16
4242 5888 5.536916 AGAGCTAGTACAAAGTTGAGACACT 59.463 40.000 0.00 0.00 0.00 3.55
4243 5889 5.774630 AGAGCTAGTACAAAGTTGAGACAC 58.225 41.667 0.00 0.00 0.00 3.67
4244 5890 6.715718 ACTAGAGCTAGTACAAAGTTGAGACA 59.284 38.462 8.35 0.00 43.98 3.41
4245 5891 7.148355 ACTAGAGCTAGTACAAAGTTGAGAC 57.852 40.000 8.35 0.00 43.98 3.36
4259 5905 9.866936 CTTCGTACAACTTTATACTAGAGCTAG 57.133 37.037 0.00 3.06 39.04 3.42
4260 5906 8.341173 GCTTCGTACAACTTTATACTAGAGCTA 58.659 37.037 0.00 0.00 0.00 3.32
4261 5907 7.067251 AGCTTCGTACAACTTTATACTAGAGCT 59.933 37.037 0.00 0.00 0.00 4.09
4262 5908 7.194962 AGCTTCGTACAACTTTATACTAGAGC 58.805 38.462 0.00 0.00 0.00 4.09
4263 5909 9.011407 CAAGCTTCGTACAACTTTATACTAGAG 57.989 37.037 0.00 0.00 0.00 2.43
4264 5910 8.733458 TCAAGCTTCGTACAACTTTATACTAGA 58.267 33.333 0.00 0.00 0.00 2.43
4265 5911 8.906636 TCAAGCTTCGTACAACTTTATACTAG 57.093 34.615 0.00 0.00 0.00 2.57
4266 5912 8.733458 TCTCAAGCTTCGTACAACTTTATACTA 58.267 33.333 0.00 0.00 0.00 1.82
4267 5913 7.541437 GTCTCAAGCTTCGTACAACTTTATACT 59.459 37.037 0.00 0.00 0.00 2.12
4268 5914 7.327761 TGTCTCAAGCTTCGTACAACTTTATAC 59.672 37.037 0.00 0.00 0.00 1.47
4269 5915 7.327761 GTGTCTCAAGCTTCGTACAACTTTATA 59.672 37.037 0.00 0.00 0.00 0.98
4270 5916 6.145696 GTGTCTCAAGCTTCGTACAACTTTAT 59.854 38.462 0.00 0.00 0.00 1.40
4271 5917 5.461078 GTGTCTCAAGCTTCGTACAACTTTA 59.539 40.000 0.00 0.00 0.00 1.85
4272 5918 4.270325 GTGTCTCAAGCTTCGTACAACTTT 59.730 41.667 0.00 0.00 0.00 2.66
4273 5919 3.802685 GTGTCTCAAGCTTCGTACAACTT 59.197 43.478 0.00 0.00 0.00 2.66
4274 5920 3.068307 AGTGTCTCAAGCTTCGTACAACT 59.932 43.478 0.00 0.00 0.00 3.16
4275 5921 3.381949 AGTGTCTCAAGCTTCGTACAAC 58.618 45.455 0.00 0.00 0.00 3.32
4276 5922 3.728076 AGTGTCTCAAGCTTCGTACAA 57.272 42.857 0.00 0.00 0.00 2.41
4277 5923 3.728076 AAGTGTCTCAAGCTTCGTACA 57.272 42.857 0.00 0.00 0.00 2.90
4278 5924 6.707599 AAATAAGTGTCTCAAGCTTCGTAC 57.292 37.500 0.00 0.00 0.00 3.67
4279 5925 6.147164 CCAAAATAAGTGTCTCAAGCTTCGTA 59.853 38.462 0.00 0.00 0.00 3.43
4280 5926 5.049405 CCAAAATAAGTGTCTCAAGCTTCGT 60.049 40.000 0.00 0.00 0.00 3.85
4281 5927 5.385617 CCAAAATAAGTGTCTCAAGCTTCG 58.614 41.667 0.00 0.00 0.00 3.79
4282 5928 5.473504 TCCCAAAATAAGTGTCTCAAGCTTC 59.526 40.000 0.00 0.00 0.00 3.86
4283 5929 5.241728 GTCCCAAAATAAGTGTCTCAAGCTT 59.758 40.000 0.00 0.00 0.00 3.74
4284 5930 4.762251 GTCCCAAAATAAGTGTCTCAAGCT 59.238 41.667 0.00 0.00 0.00 3.74
4285 5931 4.378459 CGTCCCAAAATAAGTGTCTCAAGC 60.378 45.833 0.00 0.00 0.00 4.01
4286 5932 4.154195 CCGTCCCAAAATAAGTGTCTCAAG 59.846 45.833 0.00 0.00 0.00 3.02
4287 5933 4.069304 CCGTCCCAAAATAAGTGTCTCAA 58.931 43.478 0.00 0.00 0.00 3.02
4288 5934 3.325425 TCCGTCCCAAAATAAGTGTCTCA 59.675 43.478 0.00 0.00 0.00 3.27
4289 5935 3.933332 CTCCGTCCCAAAATAAGTGTCTC 59.067 47.826 0.00 0.00 0.00 3.36
4290 5936 3.307480 CCTCCGTCCCAAAATAAGTGTCT 60.307 47.826 0.00 0.00 0.00 3.41
4291 5937 3.007635 CCTCCGTCCCAAAATAAGTGTC 58.992 50.000 0.00 0.00 0.00 3.67
4292 5938 2.290705 CCCTCCGTCCCAAAATAAGTGT 60.291 50.000 0.00 0.00 0.00 3.55
4293 5939 2.026636 TCCCTCCGTCCCAAAATAAGTG 60.027 50.000 0.00 0.00 0.00 3.16
4294 5940 2.238898 CTCCCTCCGTCCCAAAATAAGT 59.761 50.000 0.00 0.00 0.00 2.24
4295 5941 2.238898 ACTCCCTCCGTCCCAAAATAAG 59.761 50.000 0.00 0.00 0.00 1.73
4296 5942 2.271777 ACTCCCTCCGTCCCAAAATAA 58.728 47.619 0.00 0.00 0.00 1.40
4297 5943 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
4298 5944 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
4299 5945 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
4300 5946 2.852714 TATACTCCCTCCGTCCCAAA 57.147 50.000 0.00 0.00 0.00 3.28
4301 5947 4.044952 TCATATATACTCCCTCCGTCCCAA 59.955 45.833 0.00 0.00 0.00 4.12
4302 5948 3.594685 TCATATATACTCCCTCCGTCCCA 59.405 47.826 0.00 0.00 0.00 4.37
4303 5949 4.208746 CTCATATATACTCCCTCCGTCCC 58.791 52.174 0.00 0.00 0.00 4.46
4304 5950 4.857679 ACTCATATATACTCCCTCCGTCC 58.142 47.826 0.00 0.00 0.00 4.79
4305 5951 4.883006 GGACTCATATATACTCCCTCCGTC 59.117 50.000 0.00 0.00 0.00 4.79
4306 5952 4.291513 TGGACTCATATATACTCCCTCCGT 59.708 45.833 0.00 0.00 0.00 4.69
4307 5953 4.856509 TGGACTCATATATACTCCCTCCG 58.143 47.826 0.00 0.00 0.00 4.63
4308 5954 5.833340 ACTGGACTCATATATACTCCCTCC 58.167 45.833 0.00 0.00 0.00 4.30
4309 5955 6.153680 CCAACTGGACTCATATATACTCCCTC 59.846 46.154 0.00 0.00 37.39 4.30
4310 5956 6.019748 CCAACTGGACTCATATATACTCCCT 58.980 44.000 0.00 0.00 37.39 4.20
4311 5957 5.780793 ACCAACTGGACTCATATATACTCCC 59.219 44.000 1.86 0.00 38.94 4.30
4312 5958 6.919775 ACCAACTGGACTCATATATACTCC 57.080 41.667 1.86 0.00 38.94 3.85
4313 5959 8.184304 AGAACCAACTGGACTCATATATACTC 57.816 38.462 1.86 0.00 38.94 2.59
4314 5960 9.830186 ATAGAACCAACTGGACTCATATATACT 57.170 33.333 1.86 0.00 38.94 2.12
4330 5976 8.885722 TGATTCGTTAAACCATATAGAACCAAC 58.114 33.333 0.00 0.00 0.00 3.77
4331 5977 8.885722 GTGATTCGTTAAACCATATAGAACCAA 58.114 33.333 0.00 0.00 0.00 3.67
4406 6052 9.350357 CATCCAGAAAATGAATACACAAAGAAG 57.650 33.333 0.00 0.00 0.00 2.85
4412 6058 7.094248 CCTTGTCATCCAGAAAATGAATACACA 60.094 37.037 0.00 0.00 35.04 3.72
4499 6145 8.447833 TGATGCCAACTAAACTAGTTAAATTCG 58.552 33.333 8.92 0.00 46.66 3.34
4635 6282 0.542232 ACGACCACCTCACTAAGCCT 60.542 55.000 0.00 0.00 0.00 4.58
4711 6358 4.041198 ACACTTATTTTGGGACGGAGAGAA 59.959 41.667 0.00 0.00 0.00 2.87
4884 6532 7.744087 AGTAACTGCAACATGTGAAGAAATA 57.256 32.000 0.00 0.00 34.21 1.40
4904 6552 2.768527 CCTCATCTCCTCAGGCAAGTAA 59.231 50.000 0.00 0.00 0.00 2.24
5173 6822 3.376234 CAGTAAGCAACATCATGGGTCAG 59.624 47.826 0.00 0.00 0.00 3.51
5538 7189 6.353255 GGGACTAGGACAAACCATTGGTATTA 60.353 42.308 9.20 0.00 41.01 0.98
5612 7263 1.679311 CACCAGCAAGACCTAGCCA 59.321 57.895 0.00 0.00 0.00 4.75
5626 7277 4.293648 CACGAGGACACGCCACCA 62.294 66.667 0.00 0.00 40.02 4.17
5651 7302 0.389817 CGTCTCCGCATCCAGTTGAA 60.390 55.000 0.00 0.00 0.00 2.69
5675 7327 3.788766 GCATCACCACGTCCACGC 61.789 66.667 0.00 0.00 44.43 5.34
5721 7376 2.581354 GTCTCAGCGTCCATGGCT 59.419 61.111 6.96 0.00 42.61 4.75
5750 7405 2.279918 ACAACCACGTCACCTCGC 60.280 61.111 0.00 0.00 0.00 5.03
5855 7510 0.537143 TGGATGCCCTCAACACACAC 60.537 55.000 0.00 0.00 0.00 3.82
5965 7623 3.706373 GCGGGAAGAGGAGCCACA 61.706 66.667 0.00 0.00 0.00 4.17
5971 7629 3.089874 CCATGGGCGGGAAGAGGA 61.090 66.667 2.85 0.00 0.00 3.71
6021 7679 2.098117 GCGGTGGAAATTCAAGGAGATG 59.902 50.000 0.00 0.00 0.00 2.90
6138 7798 3.435026 CCCTCCTCACTTTCCTTTGTTCA 60.435 47.826 0.00 0.00 0.00 3.18
6152 7818 0.793617 AGGTTTCCTCTCCCTCCTCA 59.206 55.000 0.00 0.00 0.00 3.86
6189 7855 1.823295 GCTGGCGATTCTAGTCCCA 59.177 57.895 0.00 0.00 0.00 4.37
6217 7883 3.057174 GTGGAAGGAGAGAGTAGTGTGTG 60.057 52.174 0.00 0.00 0.00 3.82
6224 7890 6.217900 CCCTATATAGGTGGAAGGAGAGAGTA 59.782 46.154 24.31 0.00 42.03 2.59
6225 7891 5.015817 CCCTATATAGGTGGAAGGAGAGAGT 59.984 48.000 24.31 0.00 42.03 3.24
6226 7892 5.515106 CCCTATATAGGTGGAAGGAGAGAG 58.485 50.000 24.31 3.72 42.03 3.20
6227 7893 4.264442 GCCCTATATAGGTGGAAGGAGAGA 60.264 50.000 24.31 0.00 42.03 3.10
6228 7894 4.027437 GCCCTATATAGGTGGAAGGAGAG 58.973 52.174 24.31 8.58 42.03 3.20
6229 7895 3.246021 GGCCCTATATAGGTGGAAGGAGA 60.246 52.174 24.31 0.00 42.03 3.71
6230 7896 3.108376 GGCCCTATATAGGTGGAAGGAG 58.892 54.545 24.31 9.84 42.03 3.69
6231 7897 2.733637 AGGCCCTATATAGGTGGAAGGA 59.266 50.000 24.31 0.00 42.03 3.36
6232 7898 3.207044 AGGCCCTATATAGGTGGAAGG 57.793 52.381 24.31 11.12 42.03 3.46
6233 7899 5.396884 GCATTAGGCCCTATATAGGTGGAAG 60.397 48.000 24.31 11.75 42.03 3.46
6234 7900 4.473559 GCATTAGGCCCTATATAGGTGGAA 59.526 45.833 24.31 14.13 42.03 3.53
6235 7901 4.037927 GCATTAGGCCCTATATAGGTGGA 58.962 47.826 24.31 8.54 42.03 4.02
6236 7902 3.181465 CGCATTAGGCCCTATATAGGTGG 60.181 52.174 24.31 13.05 42.03 4.61
6237 7903 3.451178 ACGCATTAGGCCCTATATAGGTG 59.549 47.826 24.31 16.47 42.03 4.00
6238 7904 3.721021 ACGCATTAGGCCCTATATAGGT 58.279 45.455 24.31 11.06 42.03 3.08
6239 7905 4.755266 AACGCATTAGGCCCTATATAGG 57.245 45.455 20.43 20.43 43.25 2.57
6240 7906 6.653320 TGAAAAACGCATTAGGCCCTATATAG 59.347 38.462 0.00 2.46 40.31 1.31
6241 7907 6.535540 TGAAAAACGCATTAGGCCCTATATA 58.464 36.000 0.00 0.00 40.31 0.86
6242 7908 5.381757 TGAAAAACGCATTAGGCCCTATAT 58.618 37.500 0.00 0.00 40.31 0.86
6243 7909 4.783055 TGAAAAACGCATTAGGCCCTATA 58.217 39.130 0.00 0.00 40.31 1.31
6244 7910 3.626930 TGAAAAACGCATTAGGCCCTAT 58.373 40.909 0.00 0.00 40.31 2.57
6245 7911 3.074675 TGAAAAACGCATTAGGCCCTA 57.925 42.857 0.00 0.00 40.31 3.53
6246 7912 1.917872 TGAAAAACGCATTAGGCCCT 58.082 45.000 0.00 0.00 40.31 5.19
6247 7913 2.230266 TCTTGAAAAACGCATTAGGCCC 59.770 45.455 0.00 0.00 40.31 5.80
6248 7914 3.242518 GTCTTGAAAAACGCATTAGGCC 58.757 45.455 0.00 0.00 40.31 5.19
6249 7915 3.242518 GGTCTTGAAAAACGCATTAGGC 58.757 45.455 0.00 0.00 39.90 3.93
6250 7916 3.488489 CGGTCTTGAAAAACGCATTAGG 58.512 45.455 0.00 0.00 0.00 2.69
6257 7923 2.116366 CAAAGGCGGTCTTGAAAAACG 58.884 47.619 0.00 0.00 35.55 3.60
6258 7924 3.113322 GTCAAAGGCGGTCTTGAAAAAC 58.887 45.455 0.00 0.00 35.55 2.43
6259 7925 3.020984 AGTCAAAGGCGGTCTTGAAAAA 58.979 40.909 0.00 0.00 35.55 1.94
6260 7926 2.650322 AGTCAAAGGCGGTCTTGAAAA 58.350 42.857 0.00 0.00 35.55 2.29
6261 7927 2.341846 AGTCAAAGGCGGTCTTGAAA 57.658 45.000 0.00 0.00 35.55 2.69
6262 7928 3.695830 ATAGTCAAAGGCGGTCTTGAA 57.304 42.857 0.00 0.00 35.55 2.69
6263 7929 3.007506 TCAATAGTCAAAGGCGGTCTTGA 59.992 43.478 0.00 0.00 35.55 3.02
6264 7930 3.125316 GTCAATAGTCAAAGGCGGTCTTG 59.875 47.826 0.00 0.00 35.55 3.02
6265 7931 3.244422 TGTCAATAGTCAAAGGCGGTCTT 60.244 43.478 0.00 0.00 37.28 3.01
6266 7932 2.301870 TGTCAATAGTCAAAGGCGGTCT 59.698 45.455 0.00 0.00 0.00 3.85
6267 7933 2.695359 TGTCAATAGTCAAAGGCGGTC 58.305 47.619 0.00 0.00 0.00 4.79
6268 7934 2.851263 TGTCAATAGTCAAAGGCGGT 57.149 45.000 0.00 0.00 0.00 5.68
6269 7935 3.334691 TCTTGTCAATAGTCAAAGGCGG 58.665 45.455 0.00 0.00 0.00 6.13
6270 7936 5.551760 AATCTTGTCAATAGTCAAAGGCG 57.448 39.130 0.00 0.00 0.00 5.52
6312 7978 9.071276 AGCTTCCGATGATATAATTTTCACATT 57.929 29.630 0.00 0.00 0.00 2.71
6313 7979 8.627208 AGCTTCCGATGATATAATTTTCACAT 57.373 30.769 0.00 0.00 0.00 3.21
6314 7980 7.173218 GGAGCTTCCGATGATATAATTTTCACA 59.827 37.037 0.00 0.00 0.00 3.58
6315 7981 7.389053 AGGAGCTTCCGATGATATAATTTTCAC 59.611 37.037 0.00 0.00 42.75 3.18
6316 7982 7.453393 AGGAGCTTCCGATGATATAATTTTCA 58.547 34.615 0.00 0.00 42.75 2.69
6317 7983 7.913674 AGGAGCTTCCGATGATATAATTTTC 57.086 36.000 0.00 0.00 42.75 2.29
6318 7984 8.697507 AAAGGAGCTTCCGATGATATAATTTT 57.302 30.769 0.00 0.00 42.75 1.82
6319 7985 7.939039 TGAAAGGAGCTTCCGATGATATAATTT 59.061 33.333 0.00 0.00 42.75 1.82
6320 7986 7.389053 GTGAAAGGAGCTTCCGATGATATAATT 59.611 37.037 0.00 0.00 42.75 1.40
6321 7987 6.876257 GTGAAAGGAGCTTCCGATGATATAAT 59.124 38.462 0.00 0.00 42.75 1.28
6322 7988 6.183360 TGTGAAAGGAGCTTCCGATGATATAA 60.183 38.462 0.00 0.00 42.75 0.98
6323 7989 5.304357 TGTGAAAGGAGCTTCCGATGATATA 59.696 40.000 0.00 0.00 42.75 0.86
6324 7990 4.101585 TGTGAAAGGAGCTTCCGATGATAT 59.898 41.667 0.00 0.00 42.75 1.63
6325 7991 3.450817 TGTGAAAGGAGCTTCCGATGATA 59.549 43.478 0.00 0.00 42.75 2.15
6326 7992 2.237143 TGTGAAAGGAGCTTCCGATGAT 59.763 45.455 0.00 0.00 42.75 2.45
6327 7993 1.623311 TGTGAAAGGAGCTTCCGATGA 59.377 47.619 0.00 0.00 42.75 2.92
6328 7994 2.099141 TGTGAAAGGAGCTTCCGATG 57.901 50.000 0.00 0.00 42.75 3.84
6329 7995 3.738281 CGTATGTGAAAGGAGCTTCCGAT 60.738 47.826 0.00 0.00 42.75 4.18
6330 7996 2.416836 CGTATGTGAAAGGAGCTTCCGA 60.417 50.000 0.00 0.00 42.75 4.55
6331 7997 1.927174 CGTATGTGAAAGGAGCTTCCG 59.073 52.381 0.00 0.00 42.75 4.30
6332 7998 3.247006 TCGTATGTGAAAGGAGCTTCC 57.753 47.619 0.00 0.00 36.58 3.46
6333 7999 5.803020 AATTCGTATGTGAAAGGAGCTTC 57.197 39.130 0.00 0.00 0.00 3.86
6334 8000 5.705441 TCAAATTCGTATGTGAAAGGAGCTT 59.295 36.000 0.00 0.00 0.00 3.74
6335 8001 5.122396 GTCAAATTCGTATGTGAAAGGAGCT 59.878 40.000 0.00 0.00 29.80 4.09
6336 8002 5.324697 GTCAAATTCGTATGTGAAAGGAGC 58.675 41.667 0.00 0.00 29.80 4.70
6337 8003 5.445939 CGGTCAAATTCGTATGTGAAAGGAG 60.446 44.000 0.00 0.00 29.80 3.69
6338 8004 4.390603 CGGTCAAATTCGTATGTGAAAGGA 59.609 41.667 0.00 0.00 29.80 3.36
6339 8005 4.153475 ACGGTCAAATTCGTATGTGAAAGG 59.847 41.667 0.00 0.00 37.88 3.11
6340 8006 5.277601 ACGGTCAAATTCGTATGTGAAAG 57.722 39.130 0.00 0.00 37.88 2.62
6341 8007 6.971527 ATACGGTCAAATTCGTATGTGAAA 57.028 33.333 8.60 0.00 46.56 2.69
6348 8014 2.878580 ACGCATACGGTCAAATTCGTA 58.121 42.857 0.33 0.33 46.04 3.43
6349 8015 1.717194 ACGCATACGGTCAAATTCGT 58.283 45.000 0.00 0.00 46.04 3.85
6350 8016 2.159761 ACAACGCATACGGTCAAATTCG 60.160 45.455 0.00 0.00 46.04 3.34
6351 8017 3.160545 CACAACGCATACGGTCAAATTC 58.839 45.455 0.00 0.00 46.04 2.17
6352 8018 2.550606 ACACAACGCATACGGTCAAATT 59.449 40.909 0.00 0.00 46.04 1.82
6353 8019 2.147958 ACACAACGCATACGGTCAAAT 58.852 42.857 0.00 0.00 46.04 2.32
6354 8020 1.584175 ACACAACGCATACGGTCAAA 58.416 45.000 0.00 0.00 46.04 2.69
6355 8021 2.435533 TACACAACGCATACGGTCAA 57.564 45.000 0.00 0.00 46.04 3.18
6356 8022 2.288334 ACTTACACAACGCATACGGTCA 60.288 45.455 0.00 0.00 46.04 4.02
6357 8023 2.331194 ACTTACACAACGCATACGGTC 58.669 47.619 0.00 0.00 46.04 4.79
6358 8024 2.443887 ACTTACACAACGCATACGGT 57.556 45.000 0.00 0.00 46.04 4.83
6359 8025 2.723618 GCAACTTACACAACGCATACGG 60.724 50.000 0.00 0.00 46.04 4.02
6361 8027 3.529634 TGCAACTTACACAACGCATAC 57.470 42.857 0.00 0.00 0.00 2.39
6362 8028 3.500299 ACATGCAACTTACACAACGCATA 59.500 39.130 0.00 0.00 37.98 3.14
6363 8029 2.293122 ACATGCAACTTACACAACGCAT 59.707 40.909 0.00 0.00 40.55 4.73
6364 8030 1.673400 ACATGCAACTTACACAACGCA 59.327 42.857 0.00 0.00 0.00 5.24
6365 8031 2.307049 GACATGCAACTTACACAACGC 58.693 47.619 0.00 0.00 0.00 4.84
6366 8032 2.033236 ACGACATGCAACTTACACAACG 60.033 45.455 0.00 0.00 0.00 4.10
6367 8033 3.602390 ACGACATGCAACTTACACAAC 57.398 42.857 0.00 0.00 0.00 3.32
6368 8034 7.603963 AATATACGACATGCAACTTACACAA 57.396 32.000 0.00 0.00 0.00 3.33
6369 8035 8.880878 ATAATATACGACATGCAACTTACACA 57.119 30.769 0.00 0.00 0.00 3.72
6370 8036 9.580916 CAATAATATACGACATGCAACTTACAC 57.419 33.333 0.00 0.00 0.00 2.90
6371 8037 8.279800 GCAATAATATACGACATGCAACTTACA 58.720 33.333 0.00 0.00 32.80 2.41
6372 8038 8.495949 AGCAATAATATACGACATGCAACTTAC 58.504 33.333 0.00 0.00 34.89 2.34
6373 8039 8.495148 CAGCAATAATATACGACATGCAACTTA 58.505 33.333 0.00 0.00 34.89 2.24
6374 8040 7.012327 ACAGCAATAATATACGACATGCAACTT 59.988 33.333 0.00 0.00 34.89 2.66
6375 8041 6.483307 ACAGCAATAATATACGACATGCAACT 59.517 34.615 0.00 0.00 34.89 3.16
6376 8042 6.658831 ACAGCAATAATATACGACATGCAAC 58.341 36.000 0.00 0.00 34.89 4.17
6377 8043 6.859420 ACAGCAATAATATACGACATGCAA 57.141 33.333 0.00 0.00 34.89 4.08
6378 8044 7.439655 TGTTACAGCAATAATATACGACATGCA 59.560 33.333 0.00 0.00 34.89 3.96
6379 8045 7.792925 TGTTACAGCAATAATATACGACATGC 58.207 34.615 0.00 0.00 0.00 4.06
6383 8049 9.594038 CCAAATGTTACAGCAATAATATACGAC 57.406 33.333 0.00 0.00 0.00 4.34
6384 8050 9.332502 ACCAAATGTTACAGCAATAATATACGA 57.667 29.630 0.00 0.00 0.00 3.43
6385 8051 9.594038 GACCAAATGTTACAGCAATAATATACG 57.406 33.333 0.00 0.00 0.00 3.06
6389 8055 9.853555 CTTTGACCAAATGTTACAGCAATAATA 57.146 29.630 0.00 0.00 0.00 0.98
6390 8056 8.367156 ACTTTGACCAAATGTTACAGCAATAAT 58.633 29.630 0.00 0.00 0.00 1.28
6391 8057 7.721402 ACTTTGACCAAATGTTACAGCAATAA 58.279 30.769 0.00 0.00 0.00 1.40
6392 8058 7.283625 ACTTTGACCAAATGTTACAGCAATA 57.716 32.000 0.00 0.00 0.00 1.90
6393 8059 6.160576 ACTTTGACCAAATGTTACAGCAAT 57.839 33.333 0.00 0.00 0.00 3.56
6394 8060 5.590530 ACTTTGACCAAATGTTACAGCAA 57.409 34.783 0.00 0.00 0.00 3.91
6395 8061 5.590530 AACTTTGACCAAATGTTACAGCA 57.409 34.783 0.00 0.00 0.00 4.41
6396 8062 5.629435 GCTAACTTTGACCAAATGTTACAGC 59.371 40.000 0.00 11.19 0.00 4.40
6397 8063 6.016276 AGGCTAACTTTGACCAAATGTTACAG 60.016 38.462 0.00 7.56 0.00 2.74
6398 8064 5.830991 AGGCTAACTTTGACCAAATGTTACA 59.169 36.000 0.00 0.00 0.00 2.41
6399 8065 6.016610 TGAGGCTAACTTTGACCAAATGTTAC 60.017 38.462 0.00 8.92 0.00 2.50
6400 8066 6.065374 TGAGGCTAACTTTGACCAAATGTTA 58.935 36.000 0.00 12.42 0.00 2.41
6401 8067 4.892934 TGAGGCTAACTTTGACCAAATGTT 59.107 37.500 0.00 11.80 0.00 2.71
6402 8068 4.469657 TGAGGCTAACTTTGACCAAATGT 58.530 39.130 0.00 0.00 0.00 2.71
6403 8069 5.452078 TTGAGGCTAACTTTGACCAAATG 57.548 39.130 0.00 0.00 0.00 2.32
6404 8070 6.478512 TTTTGAGGCTAACTTTGACCAAAT 57.521 33.333 0.00 0.00 0.00 2.32
6405 8071 5.923733 TTTTGAGGCTAACTTTGACCAAA 57.076 34.783 0.00 0.00 0.00 3.28
6406 8072 5.923733 TTTTTGAGGCTAACTTTGACCAA 57.076 34.783 0.00 0.00 0.00 3.67
6425 8091 6.775708 TCTATATAGGGCCTAACGCATTTTT 58.224 36.000 18.91 0.00 40.31 1.94
6426 8092 6.368779 TCTATATAGGGCCTAACGCATTTT 57.631 37.500 18.91 0.30 40.31 1.82
6427 8093 6.349300 CATCTATATAGGGCCTAACGCATTT 58.651 40.000 18.91 1.12 40.31 2.32
6428 8094 5.163301 CCATCTATATAGGGCCTAACGCATT 60.163 44.000 18.91 1.94 40.31 3.56
6429 8095 4.345257 CCATCTATATAGGGCCTAACGCAT 59.655 45.833 18.91 10.87 40.31 4.73
6430 8096 3.704566 CCATCTATATAGGGCCTAACGCA 59.295 47.826 18.91 3.66 40.31 5.24
6431 8097 3.958798 TCCATCTATATAGGGCCTAACGC 59.041 47.826 18.91 0.00 0.00 4.84
6432 8098 5.069251 CCTTCCATCTATATAGGGCCTAACG 59.931 48.000 18.91 6.40 0.00 3.18
6433 8099 6.203072 TCCTTCCATCTATATAGGGCCTAAC 58.797 44.000 18.91 0.00 0.00 2.34
6434 8100 6.432190 TCCTTCCATCTATATAGGGCCTAA 57.568 41.667 18.91 7.61 0.00 2.69
6435 8101 5.103043 CCTCCTTCCATCTATATAGGGCCTA 60.103 48.000 17.16 17.16 0.00 3.93
6436 8102 4.327332 CCTCCTTCCATCTATATAGGGCCT 60.327 50.000 12.58 12.58 0.00 5.19
6437 8103 3.970640 CCTCCTTCCATCTATATAGGGCC 59.029 52.174 9.89 0.00 0.00 5.80
6438 8104 3.970640 CCCTCCTTCCATCTATATAGGGC 59.029 52.174 9.89 0.00 36.30 5.19
6439 8105 5.042979 ACTCCCTCCTTCCATCTATATAGGG 60.043 48.000 9.89 4.49 43.23 3.53
6440 8106 6.098716 ACTCCCTCCTTCCATCTATATAGG 57.901 45.833 9.89 0.00 0.00 2.57
6441 8107 7.878495 ACTACTCCCTCCTTCCATCTATATAG 58.122 42.308 3.10 3.10 0.00 1.31
6442 8108 7.464589 TGACTACTCCCTCCTTCCATCTATATA 59.535 40.741 0.00 0.00 0.00 0.86
6443 8109 6.278239 TGACTACTCCCTCCTTCCATCTATAT 59.722 42.308 0.00 0.00 0.00 0.86
6444 8110 5.615692 TGACTACTCCCTCCTTCCATCTATA 59.384 44.000 0.00 0.00 0.00 1.31
6445 8111 4.420552 TGACTACTCCCTCCTTCCATCTAT 59.579 45.833 0.00 0.00 0.00 1.98
6446 8112 3.792114 TGACTACTCCCTCCTTCCATCTA 59.208 47.826 0.00 0.00 0.00 1.98
6447 8113 2.587777 TGACTACTCCCTCCTTCCATCT 59.412 50.000 0.00 0.00 0.00 2.90
6448 8114 2.696187 GTGACTACTCCCTCCTTCCATC 59.304 54.545 0.00 0.00 0.00 3.51
6449 8115 2.316372 AGTGACTACTCCCTCCTTCCAT 59.684 50.000 0.00 0.00 28.79 3.41
6450 8116 1.717077 AGTGACTACTCCCTCCTTCCA 59.283 52.381 0.00 0.00 28.79 3.53
6451 8117 2.535836 AGTGACTACTCCCTCCTTCC 57.464 55.000 0.00 0.00 28.79 3.46
6452 8118 3.965694 TGTAGTGACTACTCCCTCCTTC 58.034 50.000 21.95 0.00 37.78 3.46
6453 8119 4.399483 TTGTAGTGACTACTCCCTCCTT 57.601 45.455 21.95 0.00 37.78 3.36
6454 8120 4.202695 ACTTTGTAGTGACTACTCCCTCCT 60.203 45.833 21.95 0.00 37.78 3.69
6455 8121 4.087907 ACTTTGTAGTGACTACTCCCTCC 58.912 47.826 21.95 0.00 37.78 4.30
6609 8276 1.700042 AAAAACATGGGCCCCGCAAA 61.700 50.000 22.27 0.00 0.00 3.68
6610 8277 0.832135 TAAAAACATGGGCCCCGCAA 60.832 50.000 22.27 0.00 0.00 4.85
6611 8278 1.228894 TAAAAACATGGGCCCCGCA 60.229 52.632 22.27 0.00 0.00 5.69
6612 8279 1.254975 ACTAAAAACATGGGCCCCGC 61.255 55.000 22.27 0.00 0.00 6.13
6613 8280 1.203758 GAACTAAAAACATGGGCCCCG 59.796 52.381 22.27 13.72 0.00 5.73
6614 8281 2.536066 AGAACTAAAAACATGGGCCCC 58.464 47.619 22.27 0.85 0.00 5.80
6615 8282 4.617253 AAAGAACTAAAAACATGGGCCC 57.383 40.909 17.59 17.59 0.00 5.80
6616 8283 5.820423 ACAAAAAGAACTAAAAACATGGGCC 59.180 36.000 0.00 0.00 0.00 5.80
6617 8284 6.918892 ACAAAAAGAACTAAAAACATGGGC 57.081 33.333 0.00 0.00 0.00 5.36
6618 8285 7.439955 GGGTACAAAAAGAACTAAAAACATGGG 59.560 37.037 0.00 0.00 0.00 4.00
6619 8286 8.201464 AGGGTACAAAAAGAACTAAAAACATGG 58.799 33.333 0.00 0.00 0.00 3.66
6620 8287 9.594478 AAGGGTACAAAAAGAACTAAAAACATG 57.406 29.630 0.00 0.00 0.00 3.21
6721 8388 5.835819 TCAACAATTTCCATCACCTACCAAA 59.164 36.000 0.00 0.00 0.00 3.28
6831 8498 9.844790 TCAGAATTCACATGTAATCATTTCAAC 57.155 29.630 8.44 0.00 31.15 3.18
6875 8542 1.731613 CATGCCAACTTGCGCTGTG 60.732 57.895 9.73 0.58 0.00 3.66
7127 8794 6.900189 TGCTTGCAATTTGAAAATACCATTG 58.100 32.000 0.00 0.00 0.00 2.82
7171 8839 8.997323 CAGAATAAGCAAATGACTAGGGATAAG 58.003 37.037 0.00 0.00 0.00 1.73
7299 8967 5.822519 TGATCATAAAGTTACCATGTGAGCC 59.177 40.000 0.00 0.00 0.00 4.70
7309 8977 7.750903 GCAAGGTGAGTTTGATCATAAAGTTAC 59.249 37.037 0.00 0.00 32.05 2.50
7393 9061 5.339118 GCCATTAATTTGGGGGAAGATTTGT 60.339 40.000 0.00 0.00 37.24 2.83
7545 9218 1.855295 TGACGGCAAGGGTACATCTA 58.145 50.000 0.00 0.00 0.00 1.98
7677 9350 5.161358 CAACTACACAATTCTACAGAGCGA 58.839 41.667 0.00 0.00 0.00 4.93
7709 9382 2.159517 GCTACAGCAAACCATACAGTGC 60.160 50.000 0.00 0.00 41.59 4.40
7714 9387 2.711542 ACAGGCTACAGCAAACCATAC 58.288 47.619 3.24 0.00 44.36 2.39
7740 9413 2.037902 TGAACTACATCGGCACCTTCAA 59.962 45.455 0.00 0.00 0.00 2.69
7838 9511 1.557651 GAACTCGGGCTACATTCGAC 58.442 55.000 0.00 0.00 0.00 4.20
7840 9513 0.174845 TGGAACTCGGGCTACATTCG 59.825 55.000 0.00 0.00 0.00 3.34
8082 9762 3.008049 ACGCCTAACAGAAGAAGAATGGT 59.992 43.478 0.00 0.00 0.00 3.55
8175 9856 3.262405 AGATTCATGCCCAAAATGCAACT 59.738 39.130 0.00 0.00 42.92 3.16
8180 9861 2.940410 GCCAAGATTCATGCCCAAAATG 59.060 45.455 0.00 0.00 0.00 2.32
8184 9865 1.947597 GCGCCAAGATTCATGCCCAA 61.948 55.000 0.00 0.00 0.00 4.12
8208 9889 4.415881 TCAAAGTTAAGAGTGGCAGACA 57.584 40.909 0.00 0.00 0.00 3.41
8277 9958 2.357034 GCAACTCCTTCACGCGGA 60.357 61.111 12.47 1.33 0.00 5.54
8278 9959 3.423154 GGCAACTCCTTCACGCGG 61.423 66.667 12.47 0.00 0.00 6.46
8282 9964 1.671379 GGGACGGCAACTCCTTCAC 60.671 63.158 0.00 0.00 34.96 3.18
8304 9986 4.112256 GTACGTCGTGGTTGCGCG 62.112 66.667 8.47 0.00 37.39 6.86
8307 9989 1.856597 GGATATGTACGTCGTGGTTGC 59.143 52.381 8.47 0.00 0.00 4.17
8320 10002 0.178068 GCTGGTGACACGGGATATGT 59.822 55.000 0.00 0.00 35.60 2.29
8323 10005 1.305802 AGGCTGGTGACACGGGATA 60.306 57.895 0.00 0.00 35.60 2.59
8335 10017 1.826024 CCACTAGCTACCAGGCTGG 59.174 63.158 31.62 31.62 44.58 4.85
8336 10018 1.144936 GCCACTAGCTACCAGGCTG 59.855 63.158 7.75 7.75 43.01 4.85
8337 10019 2.427245 CGCCACTAGCTACCAGGCT 61.427 63.158 18.84 0.00 43.07 4.58
8338 10020 2.107141 CGCCACTAGCTACCAGGC 59.893 66.667 13.72 13.72 40.39 4.85
8339 10021 2.815308 CCGCCACTAGCTACCAGG 59.185 66.667 0.00 0.00 40.39 4.45
8340 10022 2.107141 GCCGCCACTAGCTACCAG 59.893 66.667 0.00 0.00 40.39 4.00
8341 10023 2.682136 TGCCGCCACTAGCTACCA 60.682 61.111 0.00 0.00 40.39 3.25
8342 10024 2.202892 GTGCCGCCACTAGCTACC 60.203 66.667 0.00 0.00 40.39 3.18
8343 10025 2.582498 CGTGCCGCCACTAGCTAC 60.582 66.667 0.00 0.00 39.86 3.58
8357 10039 4.003788 AACAGGGAGGACCGCGTG 62.004 66.667 4.92 0.00 46.96 5.34
8358 10040 4.003788 CAACAGGGAGGACCGCGT 62.004 66.667 4.92 0.00 46.96 6.01
8359 10041 3.691342 TCAACAGGGAGGACCGCG 61.691 66.667 0.00 0.00 46.96 6.46
8360 10042 2.047179 GTCAACAGGGAGGACCGC 60.047 66.667 0.00 0.00 46.96 5.68
8361 10043 0.320771 CTTGTCAACAGGGAGGACCG 60.321 60.000 0.00 0.00 46.96 4.79
8362 10044 0.036875 CCTTGTCAACAGGGAGGACC 59.963 60.000 5.40 0.00 45.01 4.46
8363 10045 1.056660 TCCTTGTCAACAGGGAGGAC 58.943 55.000 9.72 0.00 45.65 3.85
8364 10046 3.569827 TCCTTGTCAACAGGGAGGA 57.430 52.632 9.72 4.18 45.65 3.71
8368 10050 0.890996 GGTGCTCCTTGTCAACAGGG 60.891 60.000 4.98 4.98 43.72 4.45
8369 10051 0.890996 GGGTGCTCCTTGTCAACAGG 60.891 60.000 4.53 0.00 0.00 4.00
8370 10052 1.230635 CGGGTGCTCCTTGTCAACAG 61.231 60.000 4.53 0.00 0.00 3.16
8371 10053 1.227823 CGGGTGCTCCTTGTCAACA 60.228 57.895 4.53 0.00 0.00 3.33
8372 10054 1.227853 ACGGGTGCTCCTTGTCAAC 60.228 57.895 4.53 0.00 0.00 3.18
8373 10055 1.070786 GACGGGTGCTCCTTGTCAA 59.929 57.895 19.16 0.00 38.22 3.18
8374 10056 2.741092 GACGGGTGCTCCTTGTCA 59.259 61.111 19.16 0.00 38.22 3.58
8375 10057 2.047179 GGACGGGTGCTCCTTGTC 60.047 66.667 17.09 17.09 37.89 3.18
8376 10058 2.526873 AGGACGGGTGCTCCTTGT 60.527 61.111 4.53 3.91 34.11 3.16
8377 10059 2.266055 GAGGACGGGTGCTCCTTG 59.734 66.667 8.94 0.52 41.46 3.61
8389 10071 3.735037 GAACGATGGCGGGGAGGAC 62.735 68.421 0.00 0.00 43.17 3.85
8390 10072 3.467226 GAACGATGGCGGGGAGGA 61.467 66.667 0.00 0.00 43.17 3.71
8391 10073 3.323758 TTGAACGATGGCGGGGAGG 62.324 63.158 0.00 0.00 43.17 4.30
8392 10074 1.815421 CTTGAACGATGGCGGGGAG 60.815 63.158 0.00 0.00 43.17 4.30
8393 10075 2.267642 CTTGAACGATGGCGGGGA 59.732 61.111 0.00 0.00 43.17 4.81
8394 10076 3.508840 GCTTGAACGATGGCGGGG 61.509 66.667 0.00 0.00 43.17 5.73
8395 10077 2.436646 AGCTTGAACGATGGCGGG 60.437 61.111 0.00 0.00 43.17 6.13
8396 10078 2.787249 CAGCTTGAACGATGGCGG 59.213 61.111 0.00 0.00 43.17 6.13
8397 10079 2.099062 GCAGCTTGAACGATGGCG 59.901 61.111 0.00 0.00 44.79 5.69
8398 10080 2.486966 GGCAGCTTGAACGATGGC 59.513 61.111 0.00 0.00 38.66 4.40
8399 10081 2.409870 GGGGCAGCTTGAACGATGG 61.410 63.158 0.00 0.00 0.00 3.51
8400 10082 2.753966 CGGGGCAGCTTGAACGATG 61.754 63.158 0.00 0.00 0.00 3.84
8401 10083 2.436646 CGGGGCAGCTTGAACGAT 60.437 61.111 0.00 0.00 0.00 3.73
8402 10084 3.936203 ACGGGGCAGCTTGAACGA 61.936 61.111 4.86 0.00 0.00 3.85
8403 10085 3.726517 CACGGGGCAGCTTGAACG 61.727 66.667 0.00 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.