Multiple sequence alignment - TraesCS2D01G301600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G301600 chr2D 100.000 3157 0 0 1 3157 384883814 384886970 0.000000e+00 5830
1 TraesCS2D01G301600 chr2D 100.000 597 0 0 3396 3992 384887209 384887805 0.000000e+00 1103
2 TraesCS2D01G301600 chr2B 93.136 1690 54 27 767 2441 455586732 455588374 0.000000e+00 2422
3 TraesCS2D01G301600 chr2B 92.868 673 26 11 2491 3152 455588462 455589123 0.000000e+00 957
4 TraesCS2D01G301600 chr2B 88.361 610 31 12 3396 3987 455589186 455589773 0.000000e+00 697
5 TraesCS2D01G301600 chr2B 86.331 139 5 4 528 655 455584100 455584235 5.380000e-29 139
6 TraesCS2D01G301600 chr2A 92.478 1675 54 28 659 2299 519932100 519933736 0.000000e+00 2329
7 TraesCS2D01G301600 chr2A 86.067 890 46 28 2286 3157 519933756 519934585 0.000000e+00 885
8 TraesCS2D01G301600 chr2A 89.556 383 20 6 3404 3777 519935511 519935882 6.040000e-128 468
9 TraesCS2D01G301600 chr2A 85.115 262 15 13 411 655 519931582 519931836 3.080000e-61 246


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G301600 chr2D 384883814 384887805 3991 False 3466.50 5830 100.000 1 3992 2 chr2D.!!$F1 3991
1 TraesCS2D01G301600 chr2B 455584100 455589773 5673 False 1053.75 2422 90.174 528 3987 4 chr2B.!!$F1 3459
2 TraesCS2D01G301600 chr2A 519931582 519935882 4300 False 982.00 2329 88.304 411 3777 4 chr2A.!!$F1 3366

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
69 70 0.178767 TTGATGCATGTCCCTCTCCG 59.821 55.0 2.46 0.0 0.00 4.63 F
115 116 0.178958 CTCCCTCCTGCCCTATACGT 60.179 60.0 0.00 0.0 0.00 3.57 F
116 117 0.178970 TCCCTCCTGCCCTATACGTC 60.179 60.0 0.00 0.0 0.00 4.34 F
134 135 0.252789 TCGACCTCCAATACCCCCAA 60.253 55.0 0.00 0.0 0.00 4.12 F
2193 4659 0.034616 AGTCAGTCTTGCTCTGTGGC 59.965 55.0 0.00 0.0 34.86 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1754 4217 0.738975 TGATCGTGGACATCTCCGTC 59.261 55.000 0.00 0.0 39.88 4.79 R
2101 4567 1.648191 CGTAAATGCACCGCACAAATG 59.352 47.619 0.00 0.0 43.04 2.32 R
2193 4659 4.499183 AGTCCAAAGTTCGCATCTAGAAG 58.501 43.478 0.00 0.0 0.00 2.85 R
2203 4669 1.461127 GCAGCTGTAGTCCAAAGTTCG 59.539 52.381 16.64 0.0 0.00 3.95 R
3615 6858 0.512952 GGCTCTGCGCATTAATACGG 59.487 55.000 12.24 0.0 41.67 4.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.786809 GAGTCGTCGACACCAATGA 57.213 52.632 26.17 0.00 34.60 2.57
24 25 2.060326 GAGTCGTCGACACCAATGAA 57.940 50.000 26.17 0.00 34.60 2.57
25 26 2.400399 GAGTCGTCGACACCAATGAAA 58.600 47.619 26.17 0.00 34.60 2.69
26 27 2.798283 GAGTCGTCGACACCAATGAAAA 59.202 45.455 26.17 0.00 34.60 2.29
27 28 3.199677 AGTCGTCGACACCAATGAAAAA 58.800 40.909 26.17 0.00 34.60 1.94
57 58 1.225855 GTGTCGACACCTTTGATGCA 58.774 50.000 33.62 0.00 40.85 3.96
58 59 1.806542 GTGTCGACACCTTTGATGCAT 59.193 47.619 33.62 0.00 40.85 3.96
59 60 1.805943 TGTCGACACCTTTGATGCATG 59.194 47.619 15.76 0.00 0.00 4.06
60 61 1.806542 GTCGACACCTTTGATGCATGT 59.193 47.619 11.55 0.00 0.00 3.21
61 62 2.076100 TCGACACCTTTGATGCATGTC 58.924 47.619 2.46 3.84 37.02 3.06
62 63 1.131126 CGACACCTTTGATGCATGTCC 59.869 52.381 2.46 0.00 37.05 4.02
63 64 1.474077 GACACCTTTGATGCATGTCCC 59.526 52.381 2.46 0.00 34.83 4.46
64 65 1.076024 ACACCTTTGATGCATGTCCCT 59.924 47.619 2.46 0.00 0.00 4.20
65 66 1.747355 CACCTTTGATGCATGTCCCTC 59.253 52.381 2.46 0.00 0.00 4.30
66 67 1.637553 ACCTTTGATGCATGTCCCTCT 59.362 47.619 2.46 0.00 0.00 3.69
67 68 2.295885 CCTTTGATGCATGTCCCTCTC 58.704 52.381 2.46 0.00 0.00 3.20
68 69 2.295885 CTTTGATGCATGTCCCTCTCC 58.704 52.381 2.46 0.00 0.00 3.71
69 70 0.178767 TTGATGCATGTCCCTCTCCG 59.821 55.000 2.46 0.00 0.00 4.63
70 71 1.070445 GATGCATGTCCCTCTCCGG 59.930 63.158 2.46 0.00 0.00 5.14
71 72 1.690219 GATGCATGTCCCTCTCCGGT 61.690 60.000 2.46 0.00 0.00 5.28
72 73 1.976132 ATGCATGTCCCTCTCCGGTG 61.976 60.000 0.00 0.00 0.00 4.94
73 74 2.359169 GCATGTCCCTCTCCGGTGA 61.359 63.158 6.00 6.00 0.00 4.02
74 75 1.690219 GCATGTCCCTCTCCGGTGAT 61.690 60.000 6.68 0.00 0.00 3.06
75 76 0.390860 CATGTCCCTCTCCGGTGATC 59.609 60.000 6.68 0.00 0.00 2.92
76 77 0.263172 ATGTCCCTCTCCGGTGATCT 59.737 55.000 6.68 0.00 0.00 2.75
77 78 0.924090 TGTCCCTCTCCGGTGATCTA 59.076 55.000 6.68 0.00 0.00 1.98
78 79 1.133761 TGTCCCTCTCCGGTGATCTAG 60.134 57.143 6.68 0.00 0.00 2.43
79 80 1.143277 GTCCCTCTCCGGTGATCTAGA 59.857 57.143 6.68 0.00 0.00 2.43
80 81 1.143277 TCCCTCTCCGGTGATCTAGAC 59.857 57.143 6.68 0.00 0.00 2.59
81 82 1.133761 CCCTCTCCGGTGATCTAGACA 60.134 57.143 6.68 0.00 0.00 3.41
82 83 2.656002 CCTCTCCGGTGATCTAGACAA 58.344 52.381 6.68 0.00 0.00 3.18
83 84 3.226777 CCTCTCCGGTGATCTAGACAAT 58.773 50.000 6.68 0.00 0.00 2.71
84 85 3.005261 CCTCTCCGGTGATCTAGACAATG 59.995 52.174 6.68 0.00 0.00 2.82
85 86 2.362397 TCTCCGGTGATCTAGACAATGC 59.638 50.000 0.00 0.00 0.00 3.56
86 87 1.412710 TCCGGTGATCTAGACAATGCC 59.587 52.381 0.00 0.00 0.00 4.40
87 88 1.138859 CCGGTGATCTAGACAATGCCA 59.861 52.381 0.00 0.00 0.00 4.92
88 89 2.419990 CCGGTGATCTAGACAATGCCAA 60.420 50.000 0.00 0.00 0.00 4.52
89 90 2.609459 CGGTGATCTAGACAATGCCAAC 59.391 50.000 0.00 0.00 0.00 3.77
90 91 3.679917 CGGTGATCTAGACAATGCCAACT 60.680 47.826 0.00 0.00 0.00 3.16
91 92 3.873952 GGTGATCTAGACAATGCCAACTC 59.126 47.826 0.00 0.00 0.00 3.01
92 93 4.507710 GTGATCTAGACAATGCCAACTCA 58.492 43.478 0.00 0.00 0.00 3.41
93 94 4.331168 GTGATCTAGACAATGCCAACTCAC 59.669 45.833 0.00 0.00 0.00 3.51
94 95 3.334583 TCTAGACAATGCCAACTCACC 57.665 47.619 0.00 0.00 0.00 4.02
95 96 2.027192 TCTAGACAATGCCAACTCACCC 60.027 50.000 0.00 0.00 0.00 4.61
96 97 0.251341 AGACAATGCCAACTCACCCC 60.251 55.000 0.00 0.00 0.00 4.95
97 98 0.251341 GACAATGCCAACTCACCCCT 60.251 55.000 0.00 0.00 0.00 4.79
98 99 0.251341 ACAATGCCAACTCACCCCTC 60.251 55.000 0.00 0.00 0.00 4.30
99 100 0.967380 CAATGCCAACTCACCCCTCC 60.967 60.000 0.00 0.00 0.00 4.30
100 101 2.155197 AATGCCAACTCACCCCTCCC 62.155 60.000 0.00 0.00 0.00 4.30
101 102 2.936032 GCCAACTCACCCCTCCCT 60.936 66.667 0.00 0.00 0.00 4.20
102 103 2.972819 GCCAACTCACCCCTCCCTC 61.973 68.421 0.00 0.00 0.00 4.30
103 104 2.301738 CCAACTCACCCCTCCCTCC 61.302 68.421 0.00 0.00 0.00 4.30
104 105 1.229658 CAACTCACCCCTCCCTCCT 60.230 63.158 0.00 0.00 0.00 3.69
105 106 1.229658 AACTCACCCCTCCCTCCTG 60.230 63.158 0.00 0.00 0.00 3.86
106 107 3.086600 CTCACCCCTCCCTCCTGC 61.087 72.222 0.00 0.00 0.00 4.85
107 108 4.741239 TCACCCCTCCCTCCTGCC 62.741 72.222 0.00 0.00 0.00 4.85
110 111 3.779083 CCCCTCCCTCCTGCCCTA 61.779 72.222 0.00 0.00 0.00 3.53
111 112 2.623513 CCCTCCCTCCTGCCCTAT 59.376 66.667 0.00 0.00 0.00 2.57
112 113 1.751143 CCCCTCCCTCCTGCCCTATA 61.751 65.000 0.00 0.00 0.00 1.31
113 114 0.545548 CCCTCCCTCCTGCCCTATAC 60.546 65.000 0.00 0.00 0.00 1.47
114 115 0.900647 CCTCCCTCCTGCCCTATACG 60.901 65.000 0.00 0.00 0.00 3.06
115 116 0.178958 CTCCCTCCTGCCCTATACGT 60.179 60.000 0.00 0.00 0.00 3.57
116 117 0.178970 TCCCTCCTGCCCTATACGTC 60.179 60.000 0.00 0.00 0.00 4.34
117 118 1.524863 CCCTCCTGCCCTATACGTCG 61.525 65.000 0.00 0.00 0.00 5.12
118 119 0.536687 CCTCCTGCCCTATACGTCGA 60.537 60.000 0.00 0.00 0.00 4.20
119 120 0.592148 CTCCTGCCCTATACGTCGAC 59.408 60.000 5.18 5.18 0.00 4.20
120 121 0.820891 TCCTGCCCTATACGTCGACC 60.821 60.000 10.58 0.00 0.00 4.79
121 122 0.822532 CCTGCCCTATACGTCGACCT 60.823 60.000 10.58 0.34 0.00 3.85
122 123 0.592148 CTGCCCTATACGTCGACCTC 59.408 60.000 10.58 0.00 0.00 3.85
123 124 0.820891 TGCCCTATACGTCGACCTCC 60.821 60.000 10.58 0.00 0.00 4.30
124 125 0.820891 GCCCTATACGTCGACCTCCA 60.821 60.000 10.58 0.00 0.00 3.86
125 126 1.683943 CCCTATACGTCGACCTCCAA 58.316 55.000 10.58 0.00 0.00 3.53
126 127 2.236766 CCCTATACGTCGACCTCCAAT 58.763 52.381 10.58 0.00 0.00 3.16
127 128 3.415212 CCCTATACGTCGACCTCCAATA 58.585 50.000 10.58 0.50 0.00 1.90
128 129 3.190118 CCCTATACGTCGACCTCCAATAC 59.810 52.174 10.58 0.00 0.00 1.89
129 130 3.190118 CCTATACGTCGACCTCCAATACC 59.810 52.174 10.58 0.00 0.00 2.73
130 131 1.392589 TACGTCGACCTCCAATACCC 58.607 55.000 10.58 0.00 0.00 3.69
131 132 1.325476 ACGTCGACCTCCAATACCCC 61.325 60.000 10.58 0.00 0.00 4.95
132 133 1.828081 GTCGACCTCCAATACCCCC 59.172 63.158 3.51 0.00 0.00 5.40
133 134 0.979187 GTCGACCTCCAATACCCCCA 60.979 60.000 3.51 0.00 0.00 4.96
134 135 0.252789 TCGACCTCCAATACCCCCAA 60.253 55.000 0.00 0.00 0.00 4.12
135 136 0.843984 CGACCTCCAATACCCCCAAT 59.156 55.000 0.00 0.00 0.00 3.16
136 137 1.214424 CGACCTCCAATACCCCCAATT 59.786 52.381 0.00 0.00 0.00 2.32
137 138 2.666317 GACCTCCAATACCCCCAATTG 58.334 52.381 0.00 0.00 34.71 2.32
138 139 1.342975 ACCTCCAATACCCCCAATTGC 60.343 52.381 0.00 0.00 33.80 3.56
139 140 1.032014 CTCCAATACCCCCAATTGCG 58.968 55.000 0.00 0.00 33.80 4.85
140 141 0.626382 TCCAATACCCCCAATTGCGA 59.374 50.000 0.00 0.00 33.80 5.10
141 142 0.744281 CCAATACCCCCAATTGCGAC 59.256 55.000 0.00 0.00 33.80 5.19
142 143 0.380378 CAATACCCCCAATTGCGACG 59.620 55.000 0.00 0.00 0.00 5.12
143 144 0.253610 AATACCCCCAATTGCGACGA 59.746 50.000 0.00 0.00 0.00 4.20
144 145 0.472471 ATACCCCCAATTGCGACGAT 59.528 50.000 0.00 0.00 0.00 3.73
145 146 0.462937 TACCCCCAATTGCGACGATG 60.463 55.000 0.00 0.00 0.00 3.84
146 147 2.480610 CCCCCAATTGCGACGATGG 61.481 63.158 0.00 0.52 0.00 3.51
147 148 2.408835 CCCAATTGCGACGATGGC 59.591 61.111 0.00 0.00 0.00 4.40
148 149 2.405805 CCCAATTGCGACGATGGCA 61.406 57.895 0.00 0.00 38.93 4.92
149 150 1.226379 CCAATTGCGACGATGGCAC 60.226 57.895 0.00 0.00 40.71 5.01
150 151 1.580893 CAATTGCGACGATGGCACG 60.581 57.895 0.00 7.71 40.71 5.34
151 152 1.739929 AATTGCGACGATGGCACGA 60.740 52.632 14.63 0.00 40.71 4.35
152 153 1.089481 AATTGCGACGATGGCACGAT 61.089 50.000 14.63 1.71 40.71 3.73
153 154 1.765161 ATTGCGACGATGGCACGATG 61.765 55.000 14.63 8.27 40.71 3.84
154 155 4.285149 GCGACGATGGCACGATGC 62.285 66.667 14.63 12.96 44.08 3.91
163 164 3.343972 GCACGATGCACACCAAGT 58.656 55.556 0.00 0.00 44.26 3.16
173 174 2.937469 CACACCAAGTGCTTGTTGAA 57.063 45.000 14.79 0.00 42.15 2.69
174 175 3.229276 CACACCAAGTGCTTGTTGAAA 57.771 42.857 14.79 0.00 42.15 2.69
175 176 3.784338 CACACCAAGTGCTTGTTGAAAT 58.216 40.909 14.79 0.00 42.15 2.17
176 177 3.552699 CACACCAAGTGCTTGTTGAAATG 59.447 43.478 14.79 1.51 42.15 2.32
177 178 2.540931 CACCAAGTGCTTGTTGAAATGC 59.459 45.455 10.56 0.00 35.36 3.56
178 179 2.137523 CCAAGTGCTTGTTGAAATGCC 58.862 47.619 10.56 0.00 38.85 4.40
179 180 2.224113 CCAAGTGCTTGTTGAAATGCCT 60.224 45.455 10.56 0.00 38.85 4.75
180 181 3.054878 CAAGTGCTTGTTGAAATGCCTC 58.945 45.455 3.91 0.00 35.92 4.70
181 182 1.615392 AGTGCTTGTTGAAATGCCTCC 59.385 47.619 0.00 0.00 0.00 4.30
182 183 1.615392 GTGCTTGTTGAAATGCCTCCT 59.385 47.619 0.00 0.00 0.00 3.69
183 184 2.819608 GTGCTTGTTGAAATGCCTCCTA 59.180 45.455 0.00 0.00 0.00 2.94
184 185 2.819608 TGCTTGTTGAAATGCCTCCTAC 59.180 45.455 0.00 0.00 0.00 3.18
185 186 2.159517 GCTTGTTGAAATGCCTCCTACG 60.160 50.000 0.00 0.00 0.00 3.51
186 187 2.851263 TGTTGAAATGCCTCCTACGT 57.149 45.000 0.00 0.00 0.00 3.57
187 188 3.965379 TGTTGAAATGCCTCCTACGTA 57.035 42.857 0.00 0.00 0.00 3.57
188 189 4.274602 TGTTGAAATGCCTCCTACGTAA 57.725 40.909 0.00 0.00 0.00 3.18
190 191 4.020928 TGTTGAAATGCCTCCTACGTAAGA 60.021 41.667 0.00 0.00 43.62 2.10
191 192 4.811969 TGAAATGCCTCCTACGTAAGAA 57.188 40.909 0.00 0.00 43.62 2.52
192 193 5.155278 TGAAATGCCTCCTACGTAAGAAA 57.845 39.130 0.00 0.00 43.62 2.52
193 194 5.553123 TGAAATGCCTCCTACGTAAGAAAA 58.447 37.500 0.00 0.00 43.62 2.29
194 195 6.177610 TGAAATGCCTCCTACGTAAGAAAAT 58.822 36.000 0.00 0.00 43.62 1.82
195 196 6.657541 TGAAATGCCTCCTACGTAAGAAAATT 59.342 34.615 0.00 0.00 43.62 1.82
196 197 7.825270 TGAAATGCCTCCTACGTAAGAAAATTA 59.175 33.333 0.00 0.00 43.62 1.40
197 198 8.747538 AAATGCCTCCTACGTAAGAAAATTAT 57.252 30.769 0.00 0.00 43.62 1.28
198 199 8.747538 AATGCCTCCTACGTAAGAAAATTATT 57.252 30.769 0.00 0.00 43.62 1.40
199 200 8.747538 ATGCCTCCTACGTAAGAAAATTATTT 57.252 30.769 0.00 0.00 43.62 1.40
200 201 8.570068 TGCCTCCTACGTAAGAAAATTATTTT 57.430 30.769 2.23 2.23 43.62 1.82
201 202 9.016438 TGCCTCCTACGTAAGAAAATTATTTTT 57.984 29.630 4.32 0.00 43.62 1.94
221 222 6.777526 TTTTCATTTATTCGCTGGTTTTGG 57.222 33.333 0.00 0.00 0.00 3.28
222 223 5.461032 TTCATTTATTCGCTGGTTTTGGT 57.539 34.783 0.00 0.00 0.00 3.67
223 224 6.576662 TTCATTTATTCGCTGGTTTTGGTA 57.423 33.333 0.00 0.00 0.00 3.25
224 225 6.576662 TCATTTATTCGCTGGTTTTGGTAA 57.423 33.333 0.00 0.00 0.00 2.85
225 226 6.616947 TCATTTATTCGCTGGTTTTGGTAAG 58.383 36.000 0.00 0.00 0.00 2.34
226 227 6.207810 TCATTTATTCGCTGGTTTTGGTAAGT 59.792 34.615 0.00 0.00 0.00 2.24
227 228 6.394025 TTTATTCGCTGGTTTTGGTAAGTT 57.606 33.333 0.00 0.00 0.00 2.66
228 229 4.929819 ATTCGCTGGTTTTGGTAAGTTT 57.070 36.364 0.00 0.00 0.00 2.66
229 230 3.701532 TCGCTGGTTTTGGTAAGTTTG 57.298 42.857 0.00 0.00 0.00 2.93
230 231 3.280295 TCGCTGGTTTTGGTAAGTTTGA 58.720 40.909 0.00 0.00 0.00 2.69
231 232 3.886505 TCGCTGGTTTTGGTAAGTTTGAT 59.113 39.130 0.00 0.00 0.00 2.57
232 233 3.980775 CGCTGGTTTTGGTAAGTTTGATG 59.019 43.478 0.00 0.00 0.00 3.07
233 234 4.499019 CGCTGGTTTTGGTAAGTTTGATGT 60.499 41.667 0.00 0.00 0.00 3.06
234 235 4.982295 GCTGGTTTTGGTAAGTTTGATGTC 59.018 41.667 0.00 0.00 0.00 3.06
235 236 5.221244 GCTGGTTTTGGTAAGTTTGATGTCT 60.221 40.000 0.00 0.00 0.00 3.41
236 237 6.016610 GCTGGTTTTGGTAAGTTTGATGTCTA 60.017 38.462 0.00 0.00 0.00 2.59
237 238 7.469456 GCTGGTTTTGGTAAGTTTGATGTCTAA 60.469 37.037 0.00 0.00 0.00 2.10
238 239 8.472007 TGGTTTTGGTAAGTTTGATGTCTAAT 57.528 30.769 0.00 0.00 0.00 1.73
239 240 8.919145 TGGTTTTGGTAAGTTTGATGTCTAATT 58.081 29.630 0.00 0.00 0.00 1.40
240 241 9.758651 GGTTTTGGTAAGTTTGATGTCTAATTT 57.241 29.630 0.00 0.00 0.00 1.82
244 245 7.816640 TGGTAAGTTTGATGTCTAATTTGAGC 58.183 34.615 0.00 0.00 0.00 4.26
245 246 7.446931 TGGTAAGTTTGATGTCTAATTTGAGCA 59.553 33.333 0.00 0.00 0.00 4.26
246 247 7.750903 GGTAAGTTTGATGTCTAATTTGAGCAC 59.249 37.037 0.00 0.00 0.00 4.40
247 248 7.516198 AAGTTTGATGTCTAATTTGAGCACT 57.484 32.000 0.00 0.00 0.00 4.40
248 249 7.516198 AGTTTGATGTCTAATTTGAGCACTT 57.484 32.000 0.00 0.00 0.00 3.16
249 250 8.621532 AGTTTGATGTCTAATTTGAGCACTTA 57.378 30.769 0.00 0.00 0.00 2.24
250 251 8.725148 AGTTTGATGTCTAATTTGAGCACTTAG 58.275 33.333 0.00 0.00 0.00 2.18
251 252 8.721478 GTTTGATGTCTAATTTGAGCACTTAGA 58.279 33.333 0.00 0.00 0.00 2.10
252 253 7.834068 TGATGTCTAATTTGAGCACTTAGAC 57.166 36.000 17.17 17.17 45.92 2.59
256 257 7.009568 GTCTAATTTGAGCACTTAGACATGG 57.990 40.000 18.20 0.00 45.43 3.66
257 258 6.595716 GTCTAATTTGAGCACTTAGACATGGT 59.404 38.462 18.20 0.00 45.43 3.55
258 259 5.633830 AATTTGAGCACTTAGACATGGTG 57.366 39.130 0.00 0.00 0.00 4.17
259 260 3.769739 TTGAGCACTTAGACATGGTGT 57.230 42.857 0.00 0.00 33.96 4.16
260 261 3.044235 TGAGCACTTAGACATGGTGTG 57.956 47.619 0.00 0.00 33.96 3.82
265 266 4.566545 CACTTAGACATGGTGTGCAAAA 57.433 40.909 0.00 0.00 0.00 2.44
266 267 5.125100 CACTTAGACATGGTGTGCAAAAT 57.875 39.130 0.00 0.00 0.00 1.82
267 268 4.919168 CACTTAGACATGGTGTGCAAAATG 59.081 41.667 0.00 0.00 0.00 2.32
268 269 4.826733 ACTTAGACATGGTGTGCAAAATGA 59.173 37.500 0.00 0.00 0.00 2.57
269 270 3.648339 AGACATGGTGTGCAAAATGAC 57.352 42.857 0.00 0.00 0.00 3.06
270 271 2.297033 AGACATGGTGTGCAAAATGACC 59.703 45.455 0.00 0.00 0.00 4.02
271 272 1.344114 ACATGGTGTGCAAAATGACCC 59.656 47.619 0.00 0.00 0.00 4.46
272 273 1.343789 CATGGTGTGCAAAATGACCCA 59.656 47.619 0.00 0.00 0.00 4.51
273 274 1.039068 TGGTGTGCAAAATGACCCAG 58.961 50.000 0.00 0.00 0.00 4.45
274 275 1.327303 GGTGTGCAAAATGACCCAGA 58.673 50.000 0.00 0.00 0.00 3.86
275 276 1.686052 GGTGTGCAAAATGACCCAGAA 59.314 47.619 0.00 0.00 0.00 3.02
276 277 2.288395 GGTGTGCAAAATGACCCAGAAG 60.288 50.000 0.00 0.00 0.00 2.85
277 278 2.362077 GTGTGCAAAATGACCCAGAAGT 59.638 45.455 0.00 0.00 0.00 3.01
278 279 3.568007 GTGTGCAAAATGACCCAGAAGTA 59.432 43.478 0.00 0.00 0.00 2.24
279 280 3.820467 TGTGCAAAATGACCCAGAAGTAG 59.180 43.478 0.00 0.00 0.00 2.57
280 281 4.072131 GTGCAAAATGACCCAGAAGTAGA 58.928 43.478 0.00 0.00 0.00 2.59
281 282 4.154918 GTGCAAAATGACCCAGAAGTAGAG 59.845 45.833 0.00 0.00 0.00 2.43
282 283 3.691609 GCAAAATGACCCAGAAGTAGAGG 59.308 47.826 0.00 0.00 0.00 3.69
283 284 4.565652 GCAAAATGACCCAGAAGTAGAGGA 60.566 45.833 0.00 0.00 0.00 3.71
284 285 5.181748 CAAAATGACCCAGAAGTAGAGGAG 58.818 45.833 0.00 0.00 0.00 3.69
285 286 3.767309 ATGACCCAGAAGTAGAGGAGT 57.233 47.619 0.00 0.00 0.00 3.85
286 287 3.544698 TGACCCAGAAGTAGAGGAGTT 57.455 47.619 0.00 0.00 0.00 3.01
287 288 3.432378 TGACCCAGAAGTAGAGGAGTTC 58.568 50.000 0.00 0.00 37.71 3.01
288 289 3.181422 TGACCCAGAAGTAGAGGAGTTCA 60.181 47.826 0.00 0.00 39.63 3.18
289 290 4.027437 GACCCAGAAGTAGAGGAGTTCAT 58.973 47.826 0.00 0.00 39.63 2.57
290 291 3.772025 ACCCAGAAGTAGAGGAGTTCATG 59.228 47.826 0.00 0.00 39.63 3.07
291 292 4.026744 CCCAGAAGTAGAGGAGTTCATGA 58.973 47.826 0.00 0.00 39.63 3.07
292 293 4.653341 CCCAGAAGTAGAGGAGTTCATGAT 59.347 45.833 0.00 0.00 39.63 2.45
293 294 5.835819 CCCAGAAGTAGAGGAGTTCATGATA 59.164 44.000 0.00 0.00 39.63 2.15
294 295 6.325028 CCCAGAAGTAGAGGAGTTCATGATAA 59.675 42.308 0.00 0.00 39.63 1.75
295 296 7.432869 CCAGAAGTAGAGGAGTTCATGATAAG 58.567 42.308 0.00 0.00 39.63 1.73
296 297 7.432869 CAGAAGTAGAGGAGTTCATGATAAGG 58.567 42.308 0.00 0.00 39.63 2.69
297 298 7.069331 CAGAAGTAGAGGAGTTCATGATAAGGT 59.931 40.741 0.00 0.00 39.63 3.50
298 299 7.621683 AGAAGTAGAGGAGTTCATGATAAGGTT 59.378 37.037 0.00 0.00 39.63 3.50
299 300 7.118496 AGTAGAGGAGTTCATGATAAGGTTG 57.882 40.000 0.00 0.00 0.00 3.77
300 301 6.897966 AGTAGAGGAGTTCATGATAAGGTTGA 59.102 38.462 0.00 0.00 0.00 3.18
301 302 6.627087 AGAGGAGTTCATGATAAGGTTGAA 57.373 37.500 0.00 0.00 0.00 2.69
302 303 6.648192 AGAGGAGTTCATGATAAGGTTGAAG 58.352 40.000 0.00 0.00 0.00 3.02
303 304 5.749462 AGGAGTTCATGATAAGGTTGAAGG 58.251 41.667 0.00 0.00 0.00 3.46
304 305 5.488919 AGGAGTTCATGATAAGGTTGAAGGA 59.511 40.000 0.00 0.00 0.00 3.36
305 306 6.012508 AGGAGTTCATGATAAGGTTGAAGGAA 60.013 38.462 0.00 0.00 0.00 3.36
306 307 6.317391 GGAGTTCATGATAAGGTTGAAGGAAG 59.683 42.308 0.00 0.00 0.00 3.46
307 308 7.020827 AGTTCATGATAAGGTTGAAGGAAGA 57.979 36.000 0.00 0.00 0.00 2.87
308 309 7.637511 AGTTCATGATAAGGTTGAAGGAAGAT 58.362 34.615 0.00 0.00 0.00 2.40
309 310 7.772757 AGTTCATGATAAGGTTGAAGGAAGATC 59.227 37.037 0.00 0.00 0.00 2.75
310 311 7.199167 TCATGATAAGGTTGAAGGAAGATCA 57.801 36.000 0.00 0.00 0.00 2.92
311 312 7.632861 TCATGATAAGGTTGAAGGAAGATCAA 58.367 34.615 0.00 0.00 34.56 2.57
312 313 8.108999 TCATGATAAGGTTGAAGGAAGATCAAA 58.891 33.333 0.00 0.00 38.44 2.69
313 314 8.910944 CATGATAAGGTTGAAGGAAGATCAAAT 58.089 33.333 0.00 0.00 38.44 2.32
314 315 8.884124 TGATAAGGTTGAAGGAAGATCAAATT 57.116 30.769 0.00 0.00 38.44 1.82
315 316 8.742777 TGATAAGGTTGAAGGAAGATCAAATTG 58.257 33.333 0.00 0.00 38.44 2.32
316 317 5.990120 AGGTTGAAGGAAGATCAAATTGG 57.010 39.130 0.00 0.00 38.44 3.16
317 318 4.774200 AGGTTGAAGGAAGATCAAATTGGG 59.226 41.667 0.00 0.00 38.44 4.12
318 319 4.081476 GGTTGAAGGAAGATCAAATTGGGG 60.081 45.833 0.00 0.00 38.44 4.96
319 320 4.402616 TGAAGGAAGATCAAATTGGGGT 57.597 40.909 0.00 0.00 0.00 4.95
320 321 4.750941 TGAAGGAAGATCAAATTGGGGTT 58.249 39.130 0.00 0.00 0.00 4.11
321 322 4.527816 TGAAGGAAGATCAAATTGGGGTTG 59.472 41.667 0.00 0.00 0.00 3.77
322 323 4.402616 AGGAAGATCAAATTGGGGTTGA 57.597 40.909 0.00 0.00 39.24 3.18
323 324 4.750941 AGGAAGATCAAATTGGGGTTGAA 58.249 39.130 0.00 0.00 38.44 2.69
324 325 4.774200 AGGAAGATCAAATTGGGGTTGAAG 59.226 41.667 0.00 0.00 38.44 3.02
325 326 4.772100 GGAAGATCAAATTGGGGTTGAAGA 59.228 41.667 0.00 0.00 38.44 2.87
326 327 5.336770 GGAAGATCAAATTGGGGTTGAAGAC 60.337 44.000 0.00 0.00 38.44 3.01
327 328 4.739793 AGATCAAATTGGGGTTGAAGACA 58.260 39.130 0.00 0.00 38.44 3.41
328 329 5.336102 AGATCAAATTGGGGTTGAAGACAT 58.664 37.500 0.00 0.00 38.44 3.06
329 330 5.420104 AGATCAAATTGGGGTTGAAGACATC 59.580 40.000 0.00 0.00 38.44 3.06
330 331 3.831911 TCAAATTGGGGTTGAAGACATCC 59.168 43.478 0.00 0.00 32.13 3.51
331 332 3.541242 AATTGGGGTTGAAGACATCCA 57.459 42.857 0.00 0.00 37.55 3.41
332 333 3.541242 ATTGGGGTTGAAGACATCCAA 57.459 42.857 0.00 0.00 42.86 3.53
333 334 3.320610 TTGGGGTTGAAGACATCCAAA 57.679 42.857 0.00 0.00 38.94 3.28
334 335 3.541242 TGGGGTTGAAGACATCCAAAT 57.459 42.857 0.00 0.00 37.55 2.32
335 336 3.430453 TGGGGTTGAAGACATCCAAATC 58.570 45.455 0.00 0.00 37.55 2.17
336 337 3.075882 TGGGGTTGAAGACATCCAAATCT 59.924 43.478 0.00 0.00 37.55 2.40
337 338 4.089361 GGGGTTGAAGACATCCAAATCTT 58.911 43.478 0.00 0.00 37.55 2.40
338 339 4.082026 GGGGTTGAAGACATCCAAATCTTG 60.082 45.833 0.00 0.00 37.55 3.02
339 340 4.524328 GGGTTGAAGACATCCAAATCTTGT 59.476 41.667 0.00 0.00 37.55 3.16
340 341 5.011023 GGGTTGAAGACATCCAAATCTTGTT 59.989 40.000 0.00 0.00 37.55 2.83
341 342 6.208599 GGGTTGAAGACATCCAAATCTTGTTA 59.791 38.462 0.00 0.00 37.55 2.41
342 343 7.255801 GGGTTGAAGACATCCAAATCTTGTTAA 60.256 37.037 0.00 0.00 37.55 2.01
343 344 7.809806 GGTTGAAGACATCCAAATCTTGTTAAG 59.190 37.037 0.00 0.00 35.29 1.85
344 345 8.352942 GTTGAAGACATCCAAATCTTGTTAAGT 58.647 33.333 0.00 0.00 35.29 2.24
345 346 8.099364 TGAAGACATCCAAATCTTGTTAAGTC 57.901 34.615 0.00 0.00 35.29 3.01
346 347 7.174946 TGAAGACATCCAAATCTTGTTAAGTCC 59.825 37.037 0.00 0.00 35.29 3.85
347 348 5.643777 AGACATCCAAATCTTGTTAAGTCCG 59.356 40.000 0.00 0.00 0.00 4.79
348 349 5.313712 ACATCCAAATCTTGTTAAGTCCGT 58.686 37.500 0.00 0.00 0.00 4.69
349 350 5.181245 ACATCCAAATCTTGTTAAGTCCGTG 59.819 40.000 0.00 0.00 0.00 4.94
350 351 3.500680 TCCAAATCTTGTTAAGTCCGTGC 59.499 43.478 0.00 0.00 0.00 5.34
351 352 3.365969 CCAAATCTTGTTAAGTCCGTGCC 60.366 47.826 0.00 0.00 0.00 5.01
352 353 2.851263 ATCTTGTTAAGTCCGTGCCA 57.149 45.000 0.00 0.00 0.00 4.92
353 354 2.851263 TCTTGTTAAGTCCGTGCCAT 57.149 45.000 0.00 0.00 0.00 4.40
354 355 3.965379 TCTTGTTAAGTCCGTGCCATA 57.035 42.857 0.00 0.00 0.00 2.74
355 356 3.857052 TCTTGTTAAGTCCGTGCCATAG 58.143 45.455 0.00 0.00 0.00 2.23
356 357 3.259876 TCTTGTTAAGTCCGTGCCATAGT 59.740 43.478 0.00 0.00 0.00 2.12
357 358 3.688694 TGTTAAGTCCGTGCCATAGTT 57.311 42.857 0.00 0.00 0.00 2.24
358 359 4.010667 TGTTAAGTCCGTGCCATAGTTT 57.989 40.909 0.00 0.00 0.00 2.66
359 360 4.391155 TGTTAAGTCCGTGCCATAGTTTT 58.609 39.130 0.00 0.00 0.00 2.43
360 361 4.822896 TGTTAAGTCCGTGCCATAGTTTTT 59.177 37.500 0.00 0.00 0.00 1.94
390 391 4.795970 GGAAACGTGCCATATGAGTTAG 57.204 45.455 3.65 0.00 0.00 2.34
391 392 4.439057 GGAAACGTGCCATATGAGTTAGA 58.561 43.478 3.65 0.00 0.00 2.10
392 393 4.508124 GGAAACGTGCCATATGAGTTAGAG 59.492 45.833 3.65 0.00 0.00 2.43
393 394 3.099267 ACGTGCCATATGAGTTAGAGC 57.901 47.619 3.65 0.00 0.00 4.09
394 395 2.430694 ACGTGCCATATGAGTTAGAGCA 59.569 45.455 3.65 0.02 0.00 4.26
395 396 3.070159 ACGTGCCATATGAGTTAGAGCAT 59.930 43.478 3.65 0.00 0.00 3.79
396 397 4.060900 CGTGCCATATGAGTTAGAGCATT 58.939 43.478 3.65 0.00 0.00 3.56
397 398 4.084171 CGTGCCATATGAGTTAGAGCATTG 60.084 45.833 3.65 0.00 0.00 2.82
398 399 5.059161 GTGCCATATGAGTTAGAGCATTGA 58.941 41.667 3.65 0.00 0.00 2.57
399 400 5.049818 GTGCCATATGAGTTAGAGCATTGAC 60.050 44.000 3.65 0.00 0.00 3.18
400 401 4.151335 GCCATATGAGTTAGAGCATTGACG 59.849 45.833 3.65 0.00 0.00 4.35
401 402 5.532557 CCATATGAGTTAGAGCATTGACGA 58.467 41.667 3.65 0.00 0.00 4.20
402 403 6.162079 CCATATGAGTTAGAGCATTGACGAT 58.838 40.000 3.65 0.00 0.00 3.73
403 404 6.648310 CCATATGAGTTAGAGCATTGACGATT 59.352 38.462 3.65 0.00 0.00 3.34
404 405 7.172190 CCATATGAGTTAGAGCATTGACGATTT 59.828 37.037 3.65 0.00 0.00 2.17
405 406 6.595772 ATGAGTTAGAGCATTGACGATTTC 57.404 37.500 0.00 0.00 0.00 2.17
406 407 5.724328 TGAGTTAGAGCATTGACGATTTCT 58.276 37.500 0.00 0.00 0.00 2.52
407 408 6.166279 TGAGTTAGAGCATTGACGATTTCTT 58.834 36.000 0.00 0.00 0.00 2.52
408 409 6.311445 TGAGTTAGAGCATTGACGATTTCTTC 59.689 38.462 0.00 0.00 0.00 2.87
409 410 6.402222 AGTTAGAGCATTGACGATTTCTTCT 58.598 36.000 0.00 0.00 0.00 2.85
410 411 6.533367 AGTTAGAGCATTGACGATTTCTTCTC 59.467 38.462 0.00 0.00 0.00 2.87
411 412 5.083533 AGAGCATTGACGATTTCTTCTCT 57.916 39.130 0.00 0.00 0.00 3.10
412 413 5.108517 AGAGCATTGACGATTTCTTCTCTC 58.891 41.667 0.00 0.00 0.00 3.20
413 414 5.083533 AGCATTGACGATTTCTTCTCTCT 57.916 39.130 0.00 0.00 0.00 3.10
414 415 5.486526 AGCATTGACGATTTCTTCTCTCTT 58.513 37.500 0.00 0.00 0.00 2.85
415 416 5.936956 AGCATTGACGATTTCTTCTCTCTTT 59.063 36.000 0.00 0.00 0.00 2.52
416 417 7.099764 AGCATTGACGATTTCTTCTCTCTTTA 58.900 34.615 0.00 0.00 0.00 1.85
417 418 7.768120 AGCATTGACGATTTCTTCTCTCTTTAT 59.232 33.333 0.00 0.00 0.00 1.40
418 419 8.394121 GCATTGACGATTTCTTCTCTCTTTATT 58.606 33.333 0.00 0.00 0.00 1.40
423 424 9.888637 GACGATTTCTTCTCTCTTTATTTTACG 57.111 33.333 0.00 0.00 0.00 3.18
424 425 9.635520 ACGATTTCTTCTCTCTTTATTTTACGA 57.364 29.630 0.00 0.00 0.00 3.43
443 444 9.587772 TTTTACGATTTGAGGAAACAATTTGAA 57.412 25.926 2.79 0.00 0.00 2.69
454 455 8.806429 AGGAAACAATTTGAAAAAGGAAATGT 57.194 26.923 2.79 0.00 0.00 2.71
459 460 9.617523 AACAATTTGAAAAAGGAAATGTGAGAT 57.382 25.926 2.79 0.00 0.00 2.75
475 477 5.702865 TGTGAGATACGGTACTTGTAACAC 58.297 41.667 16.56 16.56 0.00 3.32
499 501 4.378874 GGATAGCGATTGGATTAGCAAAGC 60.379 45.833 0.00 0.00 0.00 3.51
631 652 3.028130 TGTATACCGCCAGTCAATCTCA 58.972 45.455 0.00 0.00 0.00 3.27
633 654 3.845781 ATACCGCCAGTCAATCTCAAT 57.154 42.857 0.00 0.00 0.00 2.57
635 656 3.627395 ACCGCCAGTCAATCTCAATTA 57.373 42.857 0.00 0.00 0.00 1.40
636 657 3.535561 ACCGCCAGTCAATCTCAATTAG 58.464 45.455 0.00 0.00 0.00 1.73
637 658 3.197766 ACCGCCAGTCAATCTCAATTAGA 59.802 43.478 0.00 0.00 39.02 2.10
640 661 4.272018 CGCCAGTCAATCTCAATTAGAAGG 59.728 45.833 0.00 0.00 37.89 3.46
642 663 5.882557 GCCAGTCAATCTCAATTAGAAGGAA 59.117 40.000 0.00 0.00 37.89 3.36
676 964 0.457166 TAAGCACAACGGTCGGATCG 60.457 55.000 9.48 9.48 0.00 3.69
689 977 1.762222 CGGATCGTGAATTGACGGCC 61.762 60.000 17.35 16.58 39.88 6.13
735 3166 2.329614 CGGCTAAACCCACCCGTTG 61.330 63.158 0.00 0.00 36.18 4.10
783 3214 1.860078 GCGCCCATCGTTATAGCAC 59.140 57.895 0.00 0.00 41.07 4.40
951 3385 3.255149 AGCACTACTACACAGTACACACC 59.745 47.826 0.00 0.00 36.14 4.16
953 3387 2.816087 ACTACTACACAGTACACACCCG 59.184 50.000 0.00 0.00 36.14 5.28
1487 3946 4.521062 CTTCTCCGCGCTCCCCAG 62.521 72.222 5.56 0.00 0.00 4.45
1619 4078 1.821136 CGTACGTACTCCCCTTTCCTT 59.179 52.381 22.55 0.00 0.00 3.36
1663 4126 4.568359 TGATTCGTCTTCTCTTATGCAAGC 59.432 41.667 0.00 0.00 0.00 4.01
1664 4127 3.592898 TCGTCTTCTCTTATGCAAGCA 57.407 42.857 0.00 0.00 0.00 3.91
1665 4128 3.925379 TCGTCTTCTCTTATGCAAGCAA 58.075 40.909 0.00 0.00 0.00 3.91
1666 4129 3.928992 TCGTCTTCTCTTATGCAAGCAAG 59.071 43.478 0.00 0.00 0.00 4.01
1682 4145 3.883669 AGCAAGAACTGATGATTCCTCC 58.116 45.455 0.00 0.00 0.00 4.30
1900 4363 3.535860 GCGACGTAAGCATTCATTCATC 58.464 45.455 10.20 0.00 45.62 2.92
2010 4473 4.039973 AGAACAACCGAGTCAATCTGGTAA 59.960 41.667 0.00 0.00 34.90 2.85
2076 4542 4.333649 TCATGCCTGAACGATTGATTTCTC 59.666 41.667 0.00 0.00 0.00 2.87
2077 4543 3.673902 TGCCTGAACGATTGATTTCTCA 58.326 40.909 0.00 0.00 0.00 3.27
2078 4544 4.264253 TGCCTGAACGATTGATTTCTCAT 58.736 39.130 0.00 0.00 0.00 2.90
2079 4545 4.701651 TGCCTGAACGATTGATTTCTCATT 59.298 37.500 0.00 0.00 0.00 2.57
2080 4546 5.183713 TGCCTGAACGATTGATTTCTCATTT 59.816 36.000 0.00 0.00 0.00 2.32
2081 4547 5.741040 GCCTGAACGATTGATTTCTCATTTC 59.259 40.000 0.00 0.00 0.00 2.17
2082 4548 6.404074 GCCTGAACGATTGATTTCTCATTTCT 60.404 38.462 0.00 0.00 0.00 2.52
2193 4659 0.034616 AGTCAGTCTTGCTCTGTGGC 59.965 55.000 0.00 0.00 34.86 5.01
2203 4669 1.134580 TGCTCTGTGGCTTCTAGATGC 60.135 52.381 19.67 19.67 0.00 3.91
2363 4868 4.256920 AGTTGCTGTCATCCAGTTCATAC 58.743 43.478 0.00 0.00 43.55 2.39
2364 4869 3.266510 TGCTGTCATCCAGTTCATACC 57.733 47.619 0.00 0.00 43.55 2.73
2365 4870 2.092968 TGCTGTCATCCAGTTCATACCC 60.093 50.000 0.00 0.00 43.55 3.69
2366 4871 2.826428 CTGTCATCCAGTTCATACCCG 58.174 52.381 0.00 0.00 36.37 5.28
2380 4885 6.822170 AGTTCATACCCGTTCTTTATTTCCTC 59.178 38.462 0.00 0.00 0.00 3.71
2382 4887 3.361281 ACCCGTTCTTTATTTCCTCCC 57.639 47.619 0.00 0.00 0.00 4.30
2413 4918 7.148154 CCGCGGGAAATCCAATTCATATTATTA 60.148 37.037 20.10 0.00 37.91 0.98
2414 4919 8.405531 CGCGGGAAATCCAATTCATATTATTAT 58.594 33.333 0.00 0.00 37.91 1.28
2474 4990 8.409358 AACTCAAGCTACAAAACCATCTAAAT 57.591 30.769 0.00 0.00 0.00 1.40
2476 4992 9.686683 ACTCAAGCTACAAAACCATCTAAATAT 57.313 29.630 0.00 0.00 0.00 1.28
2480 4996 8.603242 AGCTACAAAACCATCTAAATATACCG 57.397 34.615 0.00 0.00 0.00 4.02
2481 4997 7.172703 AGCTACAAAACCATCTAAATATACCGC 59.827 37.037 0.00 0.00 0.00 5.68
2483 4999 7.633193 ACAAAACCATCTAAATATACCGCAA 57.367 32.000 0.00 0.00 0.00 4.85
2484 5000 8.057536 ACAAAACCATCTAAATATACCGCAAA 57.942 30.769 0.00 0.00 0.00 3.68
2485 5001 8.524487 ACAAAACCATCTAAATATACCGCAAAA 58.476 29.630 0.00 0.00 0.00 2.44
2486 5002 9.528018 CAAAACCATCTAAATATACCGCAAAAT 57.472 29.630 0.00 0.00 0.00 1.82
2487 5003 9.744468 AAAACCATCTAAATATACCGCAAAATC 57.256 29.630 0.00 0.00 0.00 2.17
2488 5004 8.691661 AACCATCTAAATATACCGCAAAATCT 57.308 30.769 0.00 0.00 0.00 2.40
2489 5005 8.099364 ACCATCTAAATATACCGCAAAATCTG 57.901 34.615 0.00 0.00 0.00 2.90
2797 5347 2.119832 ACCCACGTCTAGCCACCT 59.880 61.111 0.00 0.00 0.00 4.00
2802 5352 0.389948 CACGTCTAGCCACCTTGACC 60.390 60.000 0.00 0.00 39.62 4.02
2810 5368 3.307906 CACCTTGACCCGACCCGA 61.308 66.667 0.00 0.00 0.00 5.14
2834 5392 3.753797 ACCGCCATCTTTCTTTCTTCTTC 59.246 43.478 0.00 0.00 0.00 2.87
2835 5393 3.127721 CCGCCATCTTTCTTTCTTCTTCC 59.872 47.826 0.00 0.00 0.00 3.46
2903 5464 5.113383 TGCGTGGATTACTAGTACCATTTG 58.887 41.667 13.71 9.15 34.87 2.32
2925 5486 3.119096 GGAGAAAGCGGCGTGTCC 61.119 66.667 9.37 2.11 0.00 4.02
2935 5496 1.206578 GGCGTGTCCGTTGTGAATG 59.793 57.895 0.00 0.00 36.15 2.67
2936 5497 1.206578 GCGTGTCCGTTGTGAATGG 59.793 57.895 0.00 0.00 39.00 3.16
2937 5498 1.225376 GCGTGTCCGTTGTGAATGGA 61.225 55.000 0.00 0.00 44.19 3.41
2962 5523 2.095110 CAGATGAATTTTGTCGCCTGCA 60.095 45.455 0.00 0.00 0.00 4.41
2971 5532 3.153781 TCGCCTGCATCGGGATGA 61.154 61.111 12.66 0.00 41.20 2.92
3060 5621 0.939106 GCGTGGGTTTTGTGATGTGC 60.939 55.000 0.00 0.00 0.00 4.57
3122 5683 0.621082 TTGGTGCGGTATGGATTGGA 59.379 50.000 0.00 0.00 0.00 3.53
3123 5684 0.843309 TGGTGCGGTATGGATTGGAT 59.157 50.000 0.00 0.00 0.00 3.41
3124 5685 1.214175 TGGTGCGGTATGGATTGGATT 59.786 47.619 0.00 0.00 0.00 3.01
3125 5686 1.608590 GGTGCGGTATGGATTGGATTG 59.391 52.381 0.00 0.00 0.00 2.67
3126 5687 1.608590 GTGCGGTATGGATTGGATTGG 59.391 52.381 0.00 0.00 0.00 3.16
3477 6719 6.071952 TGCAGGGATTATGAGTGTTTTCTTTC 60.072 38.462 0.00 0.00 0.00 2.62
3478 6720 6.151817 GCAGGGATTATGAGTGTTTTCTTTCT 59.848 38.462 0.00 0.00 0.00 2.52
3489 6731 2.286365 TTTCTTTCTGCGGGGAACAT 57.714 45.000 0.00 0.00 0.00 2.71
3491 6733 0.984230 TCTTTCTGCGGGGAACATCT 59.016 50.000 0.00 0.00 0.00 2.90
3492 6734 2.184533 TCTTTCTGCGGGGAACATCTA 58.815 47.619 0.00 0.00 0.00 1.98
3493 6735 2.093658 TCTTTCTGCGGGGAACATCTAC 60.094 50.000 0.00 0.00 0.00 2.59
3494 6736 1.568504 TTCTGCGGGGAACATCTACT 58.431 50.000 0.00 0.00 0.00 2.57
3495 6737 0.824109 TCTGCGGGGAACATCTACTG 59.176 55.000 0.00 0.00 0.00 2.74
3535 6777 4.767255 CGACTGCTCCAGGGGCAC 62.767 72.222 11.14 0.00 35.51 5.01
3602 6845 6.014755 TGCCAAAATCTGATGGTTACAATCAA 60.015 34.615 3.83 0.00 39.00 2.57
3661 6904 1.133407 CTGTCGAAGAGTAGGACTGGC 59.867 57.143 0.00 0.00 36.95 4.85
3811 7080 4.383948 GCAGAGTTATGCAAAAACTGAAGC 59.616 41.667 19.25 15.58 45.77 3.86
3858 7127 7.667635 TCAACATTGTATGTCTATTTTCCCACA 59.332 33.333 0.00 0.00 44.07 4.17
3877 7146 8.669946 TCCCACAAAAATTTAAATTCAGAACC 57.330 30.769 13.68 0.00 0.00 3.62
3887 7156 9.541143 AATTTAAATTCAGAACCGAAAACACAT 57.459 25.926 7.64 0.00 0.00 3.21
3937 7206 6.947644 TTCAGTGATGGTATTGATGATTGG 57.052 37.500 0.00 0.00 0.00 3.16
3945 7214 6.310764 TGGTATTGATGATTGGCCAATTTT 57.689 33.333 31.13 21.10 33.21 1.82
3948 7217 7.093156 TGGTATTGATGATTGGCCAATTTTACA 60.093 33.333 31.13 23.53 33.21 2.41
3956 7225 3.118905 GGCCAATTTTACAGCCAAACA 57.881 42.857 0.00 0.00 45.07 2.83
3976 7245 5.395682 ACAGAAATTAGCTACCACGTACA 57.604 39.130 0.00 0.00 0.00 2.90
3987 7256 7.814264 AGCTACCACGTACAACTACTATAAT 57.186 36.000 0.00 0.00 0.00 1.28
3988 7257 8.230472 AGCTACCACGTACAACTACTATAATT 57.770 34.615 0.00 0.00 0.00 1.40
3989 7258 8.348507 AGCTACCACGTACAACTACTATAATTC 58.651 37.037 0.00 0.00 0.00 2.17
3990 7259 8.131100 GCTACCACGTACAACTACTATAATTCA 58.869 37.037 0.00 0.00 0.00 2.57
3991 7260 9.443283 CTACCACGTACAACTACTATAATTCAC 57.557 37.037 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 0.386858 CATTGGTGTCGACGACTCGT 60.387 55.000 26.86 3.08 45.10 4.18
4 5 0.109919 TCATTGGTGTCGACGACTCG 60.110 55.000 26.86 11.85 41.65 4.18
5 6 2.060326 TTCATTGGTGTCGACGACTC 57.940 50.000 26.86 22.89 33.15 3.36
6 7 2.519377 TTTCATTGGTGTCGACGACT 57.481 45.000 26.86 5.21 33.15 4.18
7 8 3.595709 TTTTTCATTGGTGTCGACGAC 57.404 42.857 20.97 20.97 0.00 4.34
38 39 1.225855 TGCATCAAAGGTGTCGACAC 58.774 50.000 35.26 35.26 45.72 3.67
39 40 1.805943 CATGCATCAAAGGTGTCGACA 59.194 47.619 15.76 15.76 0.00 4.35
40 41 1.806542 ACATGCATCAAAGGTGTCGAC 59.193 47.619 9.11 9.11 0.00 4.20
41 42 2.076100 GACATGCATCAAAGGTGTCGA 58.924 47.619 0.00 0.00 31.15 4.20
42 43 1.131126 GGACATGCATCAAAGGTGTCG 59.869 52.381 0.00 0.00 39.93 4.35
43 44 1.474077 GGGACATGCATCAAAGGTGTC 59.526 52.381 0.00 0.27 38.69 3.67
44 45 1.076024 AGGGACATGCATCAAAGGTGT 59.924 47.619 0.00 0.00 0.00 4.16
45 46 1.747355 GAGGGACATGCATCAAAGGTG 59.253 52.381 0.00 0.00 0.00 4.00
46 47 1.637553 AGAGGGACATGCATCAAAGGT 59.362 47.619 0.00 0.00 0.00 3.50
47 48 2.295885 GAGAGGGACATGCATCAAAGG 58.704 52.381 0.00 0.00 0.00 3.11
48 49 2.295885 GGAGAGGGACATGCATCAAAG 58.704 52.381 0.00 0.00 0.00 2.77
49 50 1.407299 CGGAGAGGGACATGCATCAAA 60.407 52.381 0.00 0.00 0.00 2.69
50 51 0.178767 CGGAGAGGGACATGCATCAA 59.821 55.000 0.00 0.00 0.00 2.57
51 52 1.689243 CCGGAGAGGGACATGCATCA 61.689 60.000 0.00 0.00 35.97 3.07
52 53 1.070445 CCGGAGAGGGACATGCATC 59.930 63.158 0.00 0.00 35.97 3.91
53 54 1.690633 ACCGGAGAGGGACATGCAT 60.691 57.895 9.46 0.00 46.96 3.96
54 55 2.284625 ACCGGAGAGGGACATGCA 60.285 61.111 9.46 0.00 46.96 3.96
55 56 1.690219 ATCACCGGAGAGGGACATGC 61.690 60.000 9.46 0.00 46.96 4.06
56 57 0.390860 GATCACCGGAGAGGGACATG 59.609 60.000 9.46 0.00 46.96 3.21
57 58 0.263172 AGATCACCGGAGAGGGACAT 59.737 55.000 9.46 0.00 46.96 3.06
58 59 0.924090 TAGATCACCGGAGAGGGACA 59.076 55.000 9.46 0.00 46.96 4.02
59 60 1.143277 TCTAGATCACCGGAGAGGGAC 59.857 57.143 9.46 0.00 46.96 4.46
60 61 1.143277 GTCTAGATCACCGGAGAGGGA 59.857 57.143 9.46 0.00 46.96 4.20
61 62 1.133761 TGTCTAGATCACCGGAGAGGG 60.134 57.143 9.46 0.00 46.96 4.30
63 64 3.551863 GCATTGTCTAGATCACCGGAGAG 60.552 52.174 9.46 0.00 0.00 3.20
64 65 2.362397 GCATTGTCTAGATCACCGGAGA 59.638 50.000 9.46 6.11 0.00 3.71
65 66 2.546795 GGCATTGTCTAGATCACCGGAG 60.547 54.545 9.46 0.00 0.00 4.63
66 67 1.412710 GGCATTGTCTAGATCACCGGA 59.587 52.381 9.46 0.00 0.00 5.14
67 68 1.138859 TGGCATTGTCTAGATCACCGG 59.861 52.381 0.00 0.00 0.00 5.28
68 69 2.602257 TGGCATTGTCTAGATCACCG 57.398 50.000 0.00 0.00 0.00 4.94
69 70 3.873952 GAGTTGGCATTGTCTAGATCACC 59.126 47.826 0.00 0.00 0.00 4.02
70 71 4.331168 GTGAGTTGGCATTGTCTAGATCAC 59.669 45.833 0.00 0.00 0.00 3.06
71 72 4.507710 GTGAGTTGGCATTGTCTAGATCA 58.492 43.478 0.00 0.00 0.00 2.92
72 73 3.873952 GGTGAGTTGGCATTGTCTAGATC 59.126 47.826 0.00 0.00 0.00 2.75
73 74 3.370953 GGGTGAGTTGGCATTGTCTAGAT 60.371 47.826 0.00 0.00 0.00 1.98
74 75 2.027192 GGGTGAGTTGGCATTGTCTAGA 60.027 50.000 0.00 0.00 0.00 2.43
75 76 2.359900 GGGTGAGTTGGCATTGTCTAG 58.640 52.381 0.00 0.00 0.00 2.43
76 77 1.004277 GGGGTGAGTTGGCATTGTCTA 59.996 52.381 0.00 0.00 0.00 2.59
77 78 0.251341 GGGGTGAGTTGGCATTGTCT 60.251 55.000 0.00 0.00 0.00 3.41
78 79 0.251341 AGGGGTGAGTTGGCATTGTC 60.251 55.000 0.00 0.00 0.00 3.18
79 80 0.251341 GAGGGGTGAGTTGGCATTGT 60.251 55.000 0.00 0.00 0.00 2.71
80 81 0.967380 GGAGGGGTGAGTTGGCATTG 60.967 60.000 0.00 0.00 0.00 2.82
81 82 1.384191 GGAGGGGTGAGTTGGCATT 59.616 57.895 0.00 0.00 0.00 3.56
82 83 2.616458 GGGAGGGGTGAGTTGGCAT 61.616 63.158 0.00 0.00 0.00 4.40
83 84 3.256960 GGGAGGGGTGAGTTGGCA 61.257 66.667 0.00 0.00 0.00 4.92
84 85 2.936032 AGGGAGGGGTGAGTTGGC 60.936 66.667 0.00 0.00 0.00 4.52
85 86 2.301738 GGAGGGAGGGGTGAGTTGG 61.302 68.421 0.00 0.00 0.00 3.77
86 87 1.229658 AGGAGGGAGGGGTGAGTTG 60.230 63.158 0.00 0.00 0.00 3.16
87 88 1.229658 CAGGAGGGAGGGGTGAGTT 60.230 63.158 0.00 0.00 0.00 3.01
88 89 2.452114 CAGGAGGGAGGGGTGAGT 59.548 66.667 0.00 0.00 0.00 3.41
89 90 3.086600 GCAGGAGGGAGGGGTGAG 61.087 72.222 0.00 0.00 0.00 3.51
90 91 4.741239 GGCAGGAGGGAGGGGTGA 62.741 72.222 0.00 0.00 0.00 4.02
93 94 1.751143 TATAGGGCAGGAGGGAGGGG 61.751 65.000 0.00 0.00 0.00 4.79
94 95 0.545548 GTATAGGGCAGGAGGGAGGG 60.546 65.000 0.00 0.00 0.00 4.30
95 96 0.900647 CGTATAGGGCAGGAGGGAGG 60.901 65.000 0.00 0.00 0.00 4.30
96 97 0.178958 ACGTATAGGGCAGGAGGGAG 60.179 60.000 0.00 0.00 0.00 4.30
97 98 0.178970 GACGTATAGGGCAGGAGGGA 60.179 60.000 0.00 0.00 0.00 4.20
98 99 1.524863 CGACGTATAGGGCAGGAGGG 61.525 65.000 0.00 0.00 0.00 4.30
99 100 0.536687 TCGACGTATAGGGCAGGAGG 60.537 60.000 0.00 0.00 0.00 4.30
100 101 0.592148 GTCGACGTATAGGGCAGGAG 59.408 60.000 0.00 0.00 0.00 3.69
101 102 0.820891 GGTCGACGTATAGGGCAGGA 60.821 60.000 9.92 0.00 0.00 3.86
102 103 0.822532 AGGTCGACGTATAGGGCAGG 60.823 60.000 9.40 0.00 0.00 4.85
103 104 0.592148 GAGGTCGACGTATAGGGCAG 59.408 60.000 11.30 0.00 0.00 4.85
104 105 0.820891 GGAGGTCGACGTATAGGGCA 60.821 60.000 11.30 0.00 0.00 5.36
105 106 0.820891 TGGAGGTCGACGTATAGGGC 60.821 60.000 11.30 0.00 0.00 5.19
106 107 1.683943 TTGGAGGTCGACGTATAGGG 58.316 55.000 11.30 0.00 0.00 3.53
107 108 3.190118 GGTATTGGAGGTCGACGTATAGG 59.810 52.174 11.30 0.00 0.00 2.57
108 109 3.190118 GGGTATTGGAGGTCGACGTATAG 59.810 52.174 11.30 0.00 0.00 1.31
109 110 3.149196 GGGTATTGGAGGTCGACGTATA 58.851 50.000 11.30 3.04 0.00 1.47
110 111 1.959282 GGGTATTGGAGGTCGACGTAT 59.041 52.381 11.30 4.05 0.00 3.06
111 112 1.392589 GGGTATTGGAGGTCGACGTA 58.607 55.000 11.30 0.00 0.00 3.57
112 113 1.325476 GGGGTATTGGAGGTCGACGT 61.325 60.000 11.12 11.12 0.00 4.34
113 114 1.440476 GGGGTATTGGAGGTCGACG 59.560 63.158 9.92 0.00 0.00 5.12
114 115 0.979187 TGGGGGTATTGGAGGTCGAC 60.979 60.000 7.13 7.13 0.00 4.20
115 116 0.252789 TTGGGGGTATTGGAGGTCGA 60.253 55.000 0.00 0.00 0.00 4.20
116 117 0.843984 ATTGGGGGTATTGGAGGTCG 59.156 55.000 0.00 0.00 0.00 4.79
117 118 2.666317 CAATTGGGGGTATTGGAGGTC 58.334 52.381 0.00 0.00 31.00 3.85
118 119 1.342975 GCAATTGGGGGTATTGGAGGT 60.343 52.381 7.72 0.00 34.36 3.85
119 120 1.413118 GCAATTGGGGGTATTGGAGG 58.587 55.000 7.72 0.00 34.36 4.30
120 121 1.032014 CGCAATTGGGGGTATTGGAG 58.968 55.000 14.43 0.00 34.36 3.86
121 122 0.626382 TCGCAATTGGGGGTATTGGA 59.374 50.000 21.01 0.00 34.36 3.53
122 123 0.744281 GTCGCAATTGGGGGTATTGG 59.256 55.000 21.01 0.00 34.36 3.16
123 124 0.380378 CGTCGCAATTGGGGGTATTG 59.620 55.000 21.01 3.14 36.34 1.90
124 125 0.253610 TCGTCGCAATTGGGGGTATT 59.746 50.000 21.01 0.00 0.00 1.89
125 126 0.472471 ATCGTCGCAATTGGGGGTAT 59.528 50.000 21.01 9.84 0.00 2.73
126 127 0.462937 CATCGTCGCAATTGGGGGTA 60.463 55.000 21.01 8.09 0.00 3.69
127 128 1.748879 CATCGTCGCAATTGGGGGT 60.749 57.895 21.01 0.85 0.00 4.95
128 129 2.480610 CCATCGTCGCAATTGGGGG 61.481 63.158 21.01 13.78 0.00 5.40
129 130 3.110139 CCATCGTCGCAATTGGGG 58.890 61.111 21.01 7.45 0.00 4.96
130 131 2.405805 TGCCATCGTCGCAATTGGG 61.406 57.895 15.98 15.98 32.05 4.12
131 132 1.226379 GTGCCATCGTCGCAATTGG 60.226 57.895 7.72 0.00 38.13 3.16
132 133 1.580893 CGTGCCATCGTCGCAATTG 60.581 57.895 0.00 0.00 38.13 2.32
133 134 1.089481 ATCGTGCCATCGTCGCAATT 61.089 50.000 0.00 0.00 38.13 2.32
134 135 1.521457 ATCGTGCCATCGTCGCAAT 60.521 52.632 0.00 0.00 38.13 3.56
135 136 2.125713 ATCGTGCCATCGTCGCAA 60.126 55.556 0.00 0.00 38.13 4.85
136 137 2.885164 CATCGTGCCATCGTCGCA 60.885 61.111 0.00 0.00 0.00 5.10
137 138 4.285149 GCATCGTGCCATCGTCGC 62.285 66.667 0.00 0.00 37.42 5.19
138 139 2.885164 TGCATCGTGCCATCGTCG 60.885 61.111 7.38 0.00 44.23 5.12
139 140 2.100031 TGTGCATCGTGCCATCGTC 61.100 57.895 7.38 0.00 44.23 4.20
140 141 2.047370 TGTGCATCGTGCCATCGT 60.047 55.556 7.38 0.00 44.23 3.73
141 142 2.400798 GTGTGCATCGTGCCATCG 59.599 61.111 7.38 0.00 44.23 3.84
142 143 1.585267 TTGGTGTGCATCGTGCCATC 61.585 55.000 7.38 6.28 44.23 3.51
143 144 1.588824 CTTGGTGTGCATCGTGCCAT 61.589 55.000 7.38 0.00 44.23 4.40
144 145 2.203266 TTGGTGTGCATCGTGCCA 60.203 55.556 7.38 0.00 44.23 4.92
145 146 2.260869 ACTTGGTGTGCATCGTGCC 61.261 57.895 7.38 0.00 44.23 5.01
146 147 1.081906 CACTTGGTGTGCATCGTGC 60.082 57.895 0.00 3.44 45.29 5.34
157 158 2.483538 GGCATTTCAACAAGCACTTGGT 60.484 45.455 14.51 5.16 44.45 3.67
158 159 2.137523 GGCATTTCAACAAGCACTTGG 58.862 47.619 14.51 0.00 44.45 3.61
159 160 3.054878 GAGGCATTTCAACAAGCACTTG 58.945 45.455 8.82 8.82 45.58 3.16
160 161 2.036346 GGAGGCATTTCAACAAGCACTT 59.964 45.455 0.00 0.00 0.00 3.16
161 162 1.615392 GGAGGCATTTCAACAAGCACT 59.385 47.619 0.00 0.00 0.00 4.40
162 163 1.615392 AGGAGGCATTTCAACAAGCAC 59.385 47.619 0.00 0.00 0.00 4.40
163 164 1.999648 AGGAGGCATTTCAACAAGCA 58.000 45.000 0.00 0.00 0.00 3.91
164 165 2.159517 CGTAGGAGGCATTTCAACAAGC 60.160 50.000 0.00 0.00 0.00 4.01
165 166 3.074412 ACGTAGGAGGCATTTCAACAAG 58.926 45.455 0.00 0.00 0.00 3.16
166 167 3.134574 ACGTAGGAGGCATTTCAACAA 57.865 42.857 0.00 0.00 0.00 2.83
167 168 2.851263 ACGTAGGAGGCATTTCAACA 57.149 45.000 0.00 0.00 0.00 3.33
168 169 4.501071 TCTTACGTAGGAGGCATTTCAAC 58.499 43.478 2.84 0.00 0.00 3.18
169 170 4.811969 TCTTACGTAGGAGGCATTTCAA 57.188 40.909 2.84 0.00 0.00 2.69
170 171 4.811969 TTCTTACGTAGGAGGCATTTCA 57.188 40.909 7.50 0.00 0.00 2.69
171 172 6.679327 ATTTTCTTACGTAGGAGGCATTTC 57.321 37.500 7.50 0.00 0.00 2.17
172 173 8.747538 ATAATTTTCTTACGTAGGAGGCATTT 57.252 30.769 7.50 2.62 0.00 2.32
173 174 8.747538 AATAATTTTCTTACGTAGGAGGCATT 57.252 30.769 7.50 9.51 0.00 3.56
174 175 8.747538 AAATAATTTTCTTACGTAGGAGGCAT 57.252 30.769 7.50 0.00 0.00 4.40
175 176 8.570068 AAAATAATTTTCTTACGTAGGAGGCA 57.430 30.769 7.50 0.00 0.00 4.75
195 196 8.930760 CCAAAACCAGCGAATAAATGAAAAATA 58.069 29.630 0.00 0.00 0.00 1.40
196 197 7.443879 ACCAAAACCAGCGAATAAATGAAAAAT 59.556 29.630 0.00 0.00 0.00 1.82
197 198 6.763610 ACCAAAACCAGCGAATAAATGAAAAA 59.236 30.769 0.00 0.00 0.00 1.94
198 199 6.284459 ACCAAAACCAGCGAATAAATGAAAA 58.716 32.000 0.00 0.00 0.00 2.29
199 200 5.848406 ACCAAAACCAGCGAATAAATGAAA 58.152 33.333 0.00 0.00 0.00 2.69
200 201 5.461032 ACCAAAACCAGCGAATAAATGAA 57.539 34.783 0.00 0.00 0.00 2.57
201 202 6.207810 ACTTACCAAAACCAGCGAATAAATGA 59.792 34.615 0.00 0.00 0.00 2.57
202 203 6.386654 ACTTACCAAAACCAGCGAATAAATG 58.613 36.000 0.00 0.00 0.00 2.32
203 204 6.584185 ACTTACCAAAACCAGCGAATAAAT 57.416 33.333 0.00 0.00 0.00 1.40
204 205 6.394025 AACTTACCAAAACCAGCGAATAAA 57.606 33.333 0.00 0.00 0.00 1.40
205 206 6.039493 TCAAACTTACCAAAACCAGCGAATAA 59.961 34.615 0.00 0.00 0.00 1.40
206 207 5.531659 TCAAACTTACCAAAACCAGCGAATA 59.468 36.000 0.00 0.00 0.00 1.75
207 208 4.339814 TCAAACTTACCAAAACCAGCGAAT 59.660 37.500 0.00 0.00 0.00 3.34
208 209 3.695060 TCAAACTTACCAAAACCAGCGAA 59.305 39.130 0.00 0.00 0.00 4.70
209 210 3.280295 TCAAACTTACCAAAACCAGCGA 58.720 40.909 0.00 0.00 0.00 4.93
210 211 3.701532 TCAAACTTACCAAAACCAGCG 57.298 42.857 0.00 0.00 0.00 5.18
211 212 4.944048 ACATCAAACTTACCAAAACCAGC 58.056 39.130 0.00 0.00 0.00 4.85
212 213 6.391227 AGACATCAAACTTACCAAAACCAG 57.609 37.500 0.00 0.00 0.00 4.00
213 214 7.883391 TTAGACATCAAACTTACCAAAACCA 57.117 32.000 0.00 0.00 0.00 3.67
214 215 9.758651 AAATTAGACATCAAACTTACCAAAACC 57.241 29.630 0.00 0.00 0.00 3.27
218 219 8.296713 GCTCAAATTAGACATCAAACTTACCAA 58.703 33.333 0.00 0.00 0.00 3.67
219 220 7.446931 TGCTCAAATTAGACATCAAACTTACCA 59.553 33.333 0.00 0.00 0.00 3.25
220 221 7.750903 GTGCTCAAATTAGACATCAAACTTACC 59.249 37.037 0.00 0.00 0.00 2.85
221 222 8.507249 AGTGCTCAAATTAGACATCAAACTTAC 58.493 33.333 0.00 0.00 0.00 2.34
222 223 8.621532 AGTGCTCAAATTAGACATCAAACTTA 57.378 30.769 0.00 0.00 0.00 2.24
223 224 7.516198 AGTGCTCAAATTAGACATCAAACTT 57.484 32.000 0.00 0.00 0.00 2.66
224 225 7.516198 AAGTGCTCAAATTAGACATCAAACT 57.484 32.000 0.00 0.00 0.00 2.66
225 226 8.721478 TCTAAGTGCTCAAATTAGACATCAAAC 58.279 33.333 0.00 0.00 32.11 2.93
226 227 8.846943 TCTAAGTGCTCAAATTAGACATCAAA 57.153 30.769 0.00 0.00 32.11 2.69
233 234 6.595326 CACCATGTCTAAGTGCTCAAATTAGA 59.405 38.462 0.00 0.00 34.10 2.10
234 235 6.372659 ACACCATGTCTAAGTGCTCAAATTAG 59.627 38.462 0.00 0.00 34.83 1.73
235 236 6.149308 CACACCATGTCTAAGTGCTCAAATTA 59.851 38.462 0.00 0.00 34.83 1.40
236 237 5.048504 CACACCATGTCTAAGTGCTCAAATT 60.049 40.000 0.00 0.00 34.83 1.82
237 238 4.456911 CACACCATGTCTAAGTGCTCAAAT 59.543 41.667 0.00 0.00 34.83 2.32
238 239 3.814842 CACACCATGTCTAAGTGCTCAAA 59.185 43.478 0.00 0.00 34.83 2.69
239 240 3.402110 CACACCATGTCTAAGTGCTCAA 58.598 45.455 0.00 0.00 34.83 3.02
240 241 3.044235 CACACCATGTCTAAGTGCTCA 57.956 47.619 0.00 0.00 34.83 4.26
244 245 4.566545 TTTTGCACACCATGTCTAAGTG 57.433 40.909 0.00 0.00 37.53 3.16
245 246 4.826733 TCATTTTGCACACCATGTCTAAGT 59.173 37.500 0.00 0.00 0.00 2.24
246 247 5.156355 GTCATTTTGCACACCATGTCTAAG 58.844 41.667 0.00 0.00 0.00 2.18
247 248 4.022416 GGTCATTTTGCACACCATGTCTAA 60.022 41.667 0.00 0.00 0.00 2.10
248 249 3.505680 GGTCATTTTGCACACCATGTCTA 59.494 43.478 0.00 0.00 0.00 2.59
249 250 2.297033 GGTCATTTTGCACACCATGTCT 59.703 45.455 0.00 0.00 0.00 3.41
250 251 2.610232 GGGTCATTTTGCACACCATGTC 60.610 50.000 0.00 0.00 0.00 3.06
251 252 1.344114 GGGTCATTTTGCACACCATGT 59.656 47.619 0.00 0.00 0.00 3.21
252 253 1.343789 TGGGTCATTTTGCACACCATG 59.656 47.619 0.00 0.00 0.00 3.66
253 254 1.619827 CTGGGTCATTTTGCACACCAT 59.380 47.619 0.00 0.00 0.00 3.55
254 255 1.039068 CTGGGTCATTTTGCACACCA 58.961 50.000 0.00 0.00 0.00 4.17
255 256 1.327303 TCTGGGTCATTTTGCACACC 58.673 50.000 0.00 0.00 0.00 4.16
256 257 2.362077 ACTTCTGGGTCATTTTGCACAC 59.638 45.455 0.00 0.00 0.00 3.82
257 258 2.665165 ACTTCTGGGTCATTTTGCACA 58.335 42.857 0.00 0.00 0.00 4.57
258 259 4.072131 TCTACTTCTGGGTCATTTTGCAC 58.928 43.478 0.00 0.00 0.00 4.57
259 260 4.326826 CTCTACTTCTGGGTCATTTTGCA 58.673 43.478 0.00 0.00 0.00 4.08
260 261 3.691609 CCTCTACTTCTGGGTCATTTTGC 59.308 47.826 0.00 0.00 0.00 3.68
261 262 5.165961 TCCTCTACTTCTGGGTCATTTTG 57.834 43.478 0.00 0.00 0.00 2.44
262 263 4.846940 ACTCCTCTACTTCTGGGTCATTTT 59.153 41.667 0.00 0.00 0.00 1.82
263 264 4.430441 ACTCCTCTACTTCTGGGTCATTT 58.570 43.478 0.00 0.00 0.00 2.32
264 265 4.067944 ACTCCTCTACTTCTGGGTCATT 57.932 45.455 0.00 0.00 0.00 2.57
265 266 3.767309 ACTCCTCTACTTCTGGGTCAT 57.233 47.619 0.00 0.00 0.00 3.06
266 267 3.181422 TGAACTCCTCTACTTCTGGGTCA 60.181 47.826 0.00 0.00 0.00 4.02
267 268 3.432378 TGAACTCCTCTACTTCTGGGTC 58.568 50.000 0.00 0.00 0.00 4.46
268 269 3.544698 TGAACTCCTCTACTTCTGGGT 57.455 47.619 0.00 0.00 0.00 4.51
269 270 4.026744 TCATGAACTCCTCTACTTCTGGG 58.973 47.826 0.00 0.00 0.00 4.45
270 271 5.867903 ATCATGAACTCCTCTACTTCTGG 57.132 43.478 0.00 0.00 0.00 3.86
271 272 7.069331 ACCTTATCATGAACTCCTCTACTTCTG 59.931 40.741 0.00 0.00 0.00 3.02
272 273 7.129425 ACCTTATCATGAACTCCTCTACTTCT 58.871 38.462 0.00 0.00 0.00 2.85
273 274 7.354751 ACCTTATCATGAACTCCTCTACTTC 57.645 40.000 0.00 0.00 0.00 3.01
274 275 7.400339 TCAACCTTATCATGAACTCCTCTACTT 59.600 37.037 0.00 0.00 0.00 2.24
275 276 6.897966 TCAACCTTATCATGAACTCCTCTACT 59.102 38.462 0.00 0.00 0.00 2.57
276 277 7.113658 TCAACCTTATCATGAACTCCTCTAC 57.886 40.000 0.00 0.00 0.00 2.59
277 278 7.147655 CCTTCAACCTTATCATGAACTCCTCTA 60.148 40.741 0.00 0.00 0.00 2.43
278 279 6.352565 CCTTCAACCTTATCATGAACTCCTCT 60.353 42.308 0.00 0.00 0.00 3.69
279 280 5.819901 CCTTCAACCTTATCATGAACTCCTC 59.180 44.000 0.00 0.00 0.00 3.71
280 281 5.488919 TCCTTCAACCTTATCATGAACTCCT 59.511 40.000 0.00 0.00 0.00 3.69
281 282 5.745227 TCCTTCAACCTTATCATGAACTCC 58.255 41.667 0.00 0.00 0.00 3.85
282 283 7.106239 TCTTCCTTCAACCTTATCATGAACTC 58.894 38.462 0.00 0.00 0.00 3.01
283 284 7.020827 TCTTCCTTCAACCTTATCATGAACT 57.979 36.000 0.00 0.00 0.00 3.01
284 285 7.554118 TGATCTTCCTTCAACCTTATCATGAAC 59.446 37.037 0.00 0.00 0.00 3.18
285 286 7.632861 TGATCTTCCTTCAACCTTATCATGAA 58.367 34.615 0.00 0.00 0.00 2.57
286 287 7.199167 TGATCTTCCTTCAACCTTATCATGA 57.801 36.000 0.00 0.00 0.00 3.07
287 288 7.870509 TTGATCTTCCTTCAACCTTATCATG 57.129 36.000 0.00 0.00 0.00 3.07
288 289 9.484806 AATTTGATCTTCCTTCAACCTTATCAT 57.515 29.630 0.00 0.00 33.03 2.45
289 290 8.742777 CAATTTGATCTTCCTTCAACCTTATCA 58.257 33.333 0.00 0.00 33.03 2.15
290 291 8.193438 CCAATTTGATCTTCCTTCAACCTTATC 58.807 37.037 0.00 0.00 33.03 1.75
291 292 7.124750 CCCAATTTGATCTTCCTTCAACCTTAT 59.875 37.037 0.00 0.00 33.03 1.73
292 293 6.437162 CCCAATTTGATCTTCCTTCAACCTTA 59.563 38.462 0.00 0.00 33.03 2.69
293 294 5.246883 CCCAATTTGATCTTCCTTCAACCTT 59.753 40.000 0.00 0.00 33.03 3.50
294 295 4.774200 CCCAATTTGATCTTCCTTCAACCT 59.226 41.667 0.00 0.00 33.03 3.50
295 296 4.081476 CCCCAATTTGATCTTCCTTCAACC 60.081 45.833 0.00 0.00 33.03 3.77
296 297 4.528206 ACCCCAATTTGATCTTCCTTCAAC 59.472 41.667 0.00 0.00 33.03 3.18
297 298 4.750941 ACCCCAATTTGATCTTCCTTCAA 58.249 39.130 0.00 0.00 0.00 2.69
298 299 4.402616 ACCCCAATTTGATCTTCCTTCA 57.597 40.909 0.00 0.00 0.00 3.02
299 300 4.772100 TCAACCCCAATTTGATCTTCCTTC 59.228 41.667 0.00 0.00 0.00 3.46
300 301 4.750941 TCAACCCCAATTTGATCTTCCTT 58.249 39.130 0.00 0.00 0.00 3.36
301 302 4.402616 TCAACCCCAATTTGATCTTCCT 57.597 40.909 0.00 0.00 0.00 3.36
302 303 4.772100 TCTTCAACCCCAATTTGATCTTCC 59.228 41.667 0.00 0.00 33.03 3.46
303 304 5.243730 TGTCTTCAACCCCAATTTGATCTTC 59.756 40.000 0.00 0.00 33.03 2.87
304 305 5.147032 TGTCTTCAACCCCAATTTGATCTT 58.853 37.500 0.00 0.00 33.03 2.40
305 306 4.739793 TGTCTTCAACCCCAATTTGATCT 58.260 39.130 0.00 0.00 33.03 2.75
306 307 5.394553 GGATGTCTTCAACCCCAATTTGATC 60.395 44.000 0.00 0.00 33.03 2.92
307 308 4.467438 GGATGTCTTCAACCCCAATTTGAT 59.533 41.667 0.00 0.00 33.03 2.57
308 309 3.831911 GGATGTCTTCAACCCCAATTTGA 59.168 43.478 0.00 0.00 31.46 2.69
309 310 3.577848 TGGATGTCTTCAACCCCAATTTG 59.422 43.478 0.00 0.00 35.94 2.32
310 311 3.855668 TGGATGTCTTCAACCCCAATTT 58.144 40.909 0.00 0.00 35.94 1.82
311 312 3.541242 TGGATGTCTTCAACCCCAATT 57.459 42.857 0.00 0.00 35.94 2.32
312 313 3.541242 TTGGATGTCTTCAACCCCAAT 57.459 42.857 0.00 0.00 35.94 3.16
313 314 3.320610 TTTGGATGTCTTCAACCCCAA 57.679 42.857 0.00 0.00 35.94 4.12
314 315 3.075882 AGATTTGGATGTCTTCAACCCCA 59.924 43.478 0.00 0.00 35.94 4.96
315 316 3.701664 AGATTTGGATGTCTTCAACCCC 58.298 45.455 0.00 0.00 35.94 4.95
316 317 4.524328 ACAAGATTTGGATGTCTTCAACCC 59.476 41.667 0.00 0.00 35.94 4.11
317 318 5.712152 ACAAGATTTGGATGTCTTCAACC 57.288 39.130 0.00 0.00 37.09 3.77
318 319 8.352942 ACTTAACAAGATTTGGATGTCTTCAAC 58.647 33.333 0.00 0.00 32.60 3.18
319 320 8.463930 ACTTAACAAGATTTGGATGTCTTCAA 57.536 30.769 0.00 0.00 32.60 2.69
320 321 7.174946 GGACTTAACAAGATTTGGATGTCTTCA 59.825 37.037 0.00 0.00 32.60 3.02
321 322 7.530863 GGACTTAACAAGATTTGGATGTCTTC 58.469 38.462 0.00 0.00 32.60 2.87
322 323 6.149474 CGGACTTAACAAGATTTGGATGTCTT 59.851 38.462 0.00 0.00 35.15 3.01
323 324 5.643777 CGGACTTAACAAGATTTGGATGTCT 59.356 40.000 0.00 0.00 34.12 3.41
324 325 5.411669 ACGGACTTAACAAGATTTGGATGTC 59.588 40.000 0.00 0.00 34.12 3.06
325 326 5.181245 CACGGACTTAACAAGATTTGGATGT 59.819 40.000 0.00 0.00 34.12 3.06
326 327 5.631026 CACGGACTTAACAAGATTTGGATG 58.369 41.667 0.00 0.00 34.12 3.51
327 328 4.156008 GCACGGACTTAACAAGATTTGGAT 59.844 41.667 0.00 0.00 34.12 3.41
328 329 3.500680 GCACGGACTTAACAAGATTTGGA 59.499 43.478 0.00 0.00 34.12 3.53
329 330 3.365969 GGCACGGACTTAACAAGATTTGG 60.366 47.826 0.00 0.00 34.12 3.28
330 331 3.252215 TGGCACGGACTTAACAAGATTTG 59.748 43.478 0.00 0.00 0.00 2.32
331 332 3.482436 TGGCACGGACTTAACAAGATTT 58.518 40.909 0.00 0.00 0.00 2.17
332 333 3.134574 TGGCACGGACTTAACAAGATT 57.865 42.857 0.00 0.00 0.00 2.40
333 334 2.851263 TGGCACGGACTTAACAAGAT 57.149 45.000 0.00 0.00 0.00 2.40
334 335 2.851263 ATGGCACGGACTTAACAAGA 57.149 45.000 0.00 0.00 0.00 3.02
335 336 3.596214 ACTATGGCACGGACTTAACAAG 58.404 45.455 0.00 0.00 0.00 3.16
336 337 3.688694 ACTATGGCACGGACTTAACAA 57.311 42.857 0.00 0.00 0.00 2.83
337 338 3.688694 AACTATGGCACGGACTTAACA 57.311 42.857 0.00 0.00 0.00 2.41
338 339 5.366829 AAAAACTATGGCACGGACTTAAC 57.633 39.130 0.00 0.00 0.00 2.01
360 361 0.802607 GGCACGTTTCCGCACAAAAA 60.803 50.000 0.00 0.00 37.70 1.94
361 362 1.226717 GGCACGTTTCCGCACAAAA 60.227 52.632 0.00 0.00 37.70 2.44
362 363 1.729470 ATGGCACGTTTCCGCACAAA 61.729 50.000 0.00 0.00 37.70 2.83
363 364 0.885150 TATGGCACGTTTCCGCACAA 60.885 50.000 0.00 0.00 37.70 3.33
364 365 0.675208 ATATGGCACGTTTCCGCACA 60.675 50.000 0.00 0.00 37.70 4.57
365 366 0.248054 CATATGGCACGTTTCCGCAC 60.248 55.000 0.00 0.00 37.70 5.34
366 367 0.391793 TCATATGGCACGTTTCCGCA 60.392 50.000 2.13 0.00 37.70 5.69
367 368 0.304705 CTCATATGGCACGTTTCCGC 59.695 55.000 2.13 0.00 37.70 5.54
368 369 1.651987 ACTCATATGGCACGTTTCCG 58.348 50.000 2.13 0.00 40.83 4.30
369 370 4.439057 TCTAACTCATATGGCACGTTTCC 58.561 43.478 2.13 0.00 0.00 3.13
370 371 4.025647 GCTCTAACTCATATGGCACGTTTC 60.026 45.833 2.13 0.00 0.00 2.78
371 372 3.871594 GCTCTAACTCATATGGCACGTTT 59.128 43.478 2.13 0.00 0.00 3.60
372 373 3.118775 TGCTCTAACTCATATGGCACGTT 60.119 43.478 2.13 4.69 0.00 3.99
373 374 2.430694 TGCTCTAACTCATATGGCACGT 59.569 45.455 2.13 0.00 0.00 4.49
374 375 3.097877 TGCTCTAACTCATATGGCACG 57.902 47.619 2.13 0.00 0.00 5.34
375 376 5.049818 GTCAATGCTCTAACTCATATGGCAC 60.050 44.000 2.13 0.00 0.00 5.01
376 377 5.059161 GTCAATGCTCTAACTCATATGGCA 58.941 41.667 2.13 2.95 0.00 4.92
377 378 4.151335 CGTCAATGCTCTAACTCATATGGC 59.849 45.833 2.13 0.00 0.00 4.40
378 379 5.532557 TCGTCAATGCTCTAACTCATATGG 58.467 41.667 2.13 0.00 0.00 2.74
379 380 7.649370 AATCGTCAATGCTCTAACTCATATG 57.351 36.000 0.00 0.00 0.00 1.78
380 381 8.147058 AGAAATCGTCAATGCTCTAACTCATAT 58.853 33.333 0.00 0.00 0.00 1.78
381 382 7.492524 AGAAATCGTCAATGCTCTAACTCATA 58.507 34.615 0.00 0.00 0.00 2.15
382 383 6.344500 AGAAATCGTCAATGCTCTAACTCAT 58.656 36.000 0.00 0.00 0.00 2.90
383 384 5.724328 AGAAATCGTCAATGCTCTAACTCA 58.276 37.500 0.00 0.00 0.00 3.41
384 385 6.533367 AGAAGAAATCGTCAATGCTCTAACTC 59.467 38.462 0.00 0.00 0.00 3.01
385 386 6.402222 AGAAGAAATCGTCAATGCTCTAACT 58.598 36.000 0.00 0.00 0.00 2.24
386 387 6.533367 AGAGAAGAAATCGTCAATGCTCTAAC 59.467 38.462 0.00 0.00 0.00 2.34
387 388 6.634805 AGAGAAGAAATCGTCAATGCTCTAA 58.365 36.000 0.00 0.00 0.00 2.10
388 389 6.096141 AGAGAGAAGAAATCGTCAATGCTCTA 59.904 38.462 0.00 0.00 31.02 2.43
389 390 5.083533 AGAGAAGAAATCGTCAATGCTCT 57.916 39.130 0.00 0.00 0.00 4.09
390 391 5.108517 AGAGAGAAGAAATCGTCAATGCTC 58.891 41.667 0.00 0.00 0.00 4.26
391 392 5.083533 AGAGAGAAGAAATCGTCAATGCT 57.916 39.130 0.00 0.00 0.00 3.79
392 393 5.793026 AAGAGAGAAGAAATCGTCAATGC 57.207 39.130 0.00 0.00 0.00 3.56
397 398 9.888637 CGTAAAATAAAGAGAGAAGAAATCGTC 57.111 33.333 0.00 0.00 0.00 4.20
398 399 9.635520 TCGTAAAATAAAGAGAGAAGAAATCGT 57.364 29.630 0.00 0.00 0.00 3.73
406 407 9.938280 TCCTCAAATCGTAAAATAAAGAGAGAA 57.062 29.630 0.00 0.00 0.00 2.87
407 408 9.938280 TTCCTCAAATCGTAAAATAAAGAGAGA 57.062 29.630 0.00 0.00 0.00 3.10
416 417 9.757227 TCAAATTGTTTCCTCAAATCGTAAAAT 57.243 25.926 0.00 0.00 0.00 1.82
417 418 9.587772 TTCAAATTGTTTCCTCAAATCGTAAAA 57.412 25.926 0.00 0.00 0.00 1.52
418 419 9.587772 TTTCAAATTGTTTCCTCAAATCGTAAA 57.412 25.926 0.00 0.00 0.00 2.01
419 420 9.587772 TTTTCAAATTGTTTCCTCAAATCGTAA 57.412 25.926 0.00 0.00 0.00 3.18
420 421 9.587772 TTTTTCAAATTGTTTCCTCAAATCGTA 57.412 25.926 0.00 0.00 0.00 3.43
421 422 8.485976 TTTTTCAAATTGTTTCCTCAAATCGT 57.514 26.923 0.00 0.00 0.00 3.73
422 423 8.063630 CCTTTTTCAAATTGTTTCCTCAAATCG 58.936 33.333 0.00 0.00 0.00 3.34
423 424 9.108284 TCCTTTTTCAAATTGTTTCCTCAAATC 57.892 29.630 0.00 0.00 0.00 2.17
424 425 9.460019 TTCCTTTTTCAAATTGTTTCCTCAAAT 57.540 25.926 0.00 0.00 0.00 2.32
425 426 8.854614 TTCCTTTTTCAAATTGTTTCCTCAAA 57.145 26.923 0.00 0.00 0.00 2.69
428 429 8.892723 ACATTTCCTTTTTCAAATTGTTTCCTC 58.107 29.630 0.00 0.00 0.00 3.71
431 432 9.706846 CTCACATTTCCTTTTTCAAATTGTTTC 57.293 29.630 0.00 0.00 0.00 2.78
438 439 7.013846 ACCGTATCTCACATTTCCTTTTTCAAA 59.986 33.333 0.00 0.00 0.00 2.69
443 444 6.708285 AGTACCGTATCTCACATTTCCTTTT 58.292 36.000 0.00 0.00 0.00 2.27
454 455 4.142622 CCGTGTTACAAGTACCGTATCTCA 60.143 45.833 0.00 0.00 0.00 3.27
459 460 4.201910 GCTATCCGTGTTACAAGTACCGTA 60.202 45.833 0.00 0.00 0.00 4.02
475 477 2.959516 TGCTAATCCAATCGCTATCCG 58.040 47.619 0.00 0.00 38.61 4.18
528 539 8.542497 AGTTTAACGCACTATCAAATCAAGTA 57.458 30.769 0.00 0.00 0.00 2.24
529 540 7.435068 AGTTTAACGCACTATCAAATCAAGT 57.565 32.000 0.00 0.00 0.00 3.16
530 541 9.988350 ATTAGTTTAACGCACTATCAAATCAAG 57.012 29.630 0.00 0.00 0.00 3.02
631 652 6.371825 CGCACTAAGTTTCCTTCCTTCTAATT 59.628 38.462 0.00 0.00 31.89 1.40
633 654 5.221581 ACGCACTAAGTTTCCTTCCTTCTAA 60.222 40.000 0.00 0.00 31.89 2.10
635 656 3.071167 ACGCACTAAGTTTCCTTCCTTCT 59.929 43.478 0.00 0.00 31.89 2.85
636 657 3.400255 ACGCACTAAGTTTCCTTCCTTC 58.600 45.455 0.00 0.00 31.89 3.46
637 658 3.487120 ACGCACTAAGTTTCCTTCCTT 57.513 42.857 0.00 0.00 31.89 3.36
640 661 3.744426 TGCTTACGCACTAAGTTTCCTTC 59.256 43.478 0.00 0.00 42.25 3.46
642 663 3.396260 TGCTTACGCACTAAGTTTCCT 57.604 42.857 0.00 0.00 42.25 3.36
655 676 0.734942 ATCCGACCGTTGTGCTTACG 60.735 55.000 0.00 0.00 38.67 3.18
661 949 0.665068 TTCACGATCCGACCGTTGTG 60.665 55.000 0.00 0.00 38.29 3.33
668 956 0.921347 CCGTCAATTCACGATCCGAC 59.079 55.000 2.44 0.00 42.69 4.79
676 964 1.463674 AATCTGGGCCGTCAATTCAC 58.536 50.000 0.00 0.00 0.00 3.18
689 977 3.989817 GCCACTTGTTTTGCTTAATCTGG 59.010 43.478 0.00 0.00 0.00 3.86
735 3166 2.798148 ATTCGTCAACCGTGCCTCCC 62.798 60.000 0.00 0.00 37.94 4.30
764 3195 1.663388 TGCTATAACGATGGGCGCG 60.663 57.895 0.00 0.00 46.04 6.86
765 3196 1.566018 GGTGCTATAACGATGGGCGC 61.566 60.000 0.00 0.00 46.04 6.53
834 3268 1.141881 CGGGGATGACTCACTTCCG 59.858 63.158 0.00 0.00 41.84 4.30
836 3270 0.175989 GTCCGGGGATGACTCACTTC 59.824 60.000 0.00 0.00 0.00 3.01
837 3271 1.605058 CGTCCGGGGATGACTCACTT 61.605 60.000 0.00 0.00 33.22 3.16
838 3272 2.052690 CGTCCGGGGATGACTCACT 61.053 63.158 0.00 0.00 33.22 3.41
839 3273 2.494918 CGTCCGGGGATGACTCAC 59.505 66.667 0.00 0.00 33.22 3.51
840 3274 3.458163 GCGTCCGGGGATGACTCA 61.458 66.667 11.09 0.00 33.22 3.41
841 3275 4.570663 CGCGTCCGGGGATGACTC 62.571 72.222 11.09 0.00 33.22 3.36
917 3351 1.035932 GTAGTGCTCGCCCACCTCTA 61.036 60.000 2.28 0.00 36.38 2.43
951 3385 0.732880 CTTGTAGTGAGCGTGGACGG 60.733 60.000 0.71 0.00 40.23 4.79
953 3387 1.983972 CTCTTGTAGTGAGCGTGGAC 58.016 55.000 0.00 0.00 0.00 4.02
999 3435 3.616219 TCTCTTCTCTTCTCTTCTCCCG 58.384 50.000 0.00 0.00 0.00 5.14
1001 3437 4.402474 CCCTTCTCTTCTCTTCTCTTCTCC 59.598 50.000 0.00 0.00 0.00 3.71
1517 3976 3.302347 AAGAGCACGAGGAAGGCGG 62.302 63.158 0.00 0.00 0.00 6.13
1663 4126 3.549794 GGGGAGGAATCATCAGTTCTTG 58.450 50.000 0.00 0.00 0.00 3.02
1664 4127 2.171448 CGGGGAGGAATCATCAGTTCTT 59.829 50.000 0.00 0.00 0.00 2.52
1665 4128 1.765314 CGGGGAGGAATCATCAGTTCT 59.235 52.381 0.00 0.00 0.00 3.01
1666 4129 1.486726 ACGGGGAGGAATCATCAGTTC 59.513 52.381 0.00 0.00 0.00 3.01
1682 4145 2.787249 CTCTGCGCAATCAACGGG 59.213 61.111 13.05 0.00 0.00 5.28
1703 4166 1.563111 TCACGAAGTTGTGGAACGTC 58.437 50.000 0.00 0.00 41.61 4.34
1754 4217 0.738975 TGATCGTGGACATCTCCGTC 59.261 55.000 0.00 0.00 39.88 4.79
2101 4567 1.648191 CGTAAATGCACCGCACAAATG 59.352 47.619 0.00 0.00 43.04 2.32
2193 4659 4.499183 AGTCCAAAGTTCGCATCTAGAAG 58.501 43.478 0.00 0.00 0.00 2.85
2203 4669 1.461127 GCAGCTGTAGTCCAAAGTTCG 59.539 52.381 16.64 0.00 0.00 3.95
2363 4868 3.646736 AGGGAGGAAATAAAGAACGGG 57.353 47.619 0.00 0.00 0.00 5.28
2364 4869 5.105877 GGAAAAGGGAGGAAATAAAGAACGG 60.106 44.000 0.00 0.00 0.00 4.44
2365 4870 5.391629 CGGAAAAGGGAGGAAATAAAGAACG 60.392 44.000 0.00 0.00 0.00 3.95
2366 4871 5.621555 GCGGAAAAGGGAGGAAATAAAGAAC 60.622 44.000 0.00 0.00 0.00 3.01
2441 4953 8.726988 TGGTTTTGTAGCTTGAGTTCAATATAC 58.273 33.333 0.00 3.17 35.02 1.47
2442 4954 8.856153 TGGTTTTGTAGCTTGAGTTCAATATA 57.144 30.769 0.00 0.00 35.02 0.86
2474 4990 2.680841 GCCACACAGATTTTGCGGTATA 59.319 45.455 0.00 0.00 0.00 1.47
2476 4992 0.878416 GCCACACAGATTTTGCGGTA 59.122 50.000 0.00 0.00 0.00 4.02
2477 4993 1.106351 TGCCACACAGATTTTGCGGT 61.106 50.000 0.00 0.00 0.00 5.68
2478 4994 1.659233 TGCCACACAGATTTTGCGG 59.341 52.632 0.00 0.00 0.00 5.69
2486 5002 6.738857 AGAAGTACTTCATCTGCCACACAGA 61.739 44.000 31.80 0.00 46.71 3.41
2487 5003 3.681897 GAAGTACTTCATCTGCCACACAG 59.318 47.826 27.12 0.00 42.25 3.66
2488 5004 3.324846 AGAAGTACTTCATCTGCCACACA 59.675 43.478 31.80 0.00 41.84 3.72
2489 5005 3.931578 AGAAGTACTTCATCTGCCACAC 58.068 45.455 31.80 6.43 41.84 3.82
2692 5242 2.270352 TGTTGTAGAACCTGGGCTTG 57.730 50.000 0.00 0.00 0.00 4.01
2731 5281 2.031163 AGCTTGGTCGTGTCCAGC 59.969 61.111 0.00 0.00 38.80 4.85
2797 5347 3.618750 GGTGTCGGGTCGGGTCAA 61.619 66.667 0.00 0.00 0.00 3.18
2810 5368 2.568623 AGAAAGAAAGATGGCGGTGT 57.431 45.000 0.00 0.00 0.00 4.16
2834 5392 2.866028 GCAGCAAGCAACGAGAGG 59.134 61.111 0.00 0.00 44.79 3.69
2920 5481 1.878953 ACTCCATTCACAACGGACAC 58.121 50.000 0.00 0.00 0.00 3.67
2925 5486 4.494484 TCATCTGTACTCCATTCACAACG 58.506 43.478 0.00 0.00 0.00 4.10
2932 5493 6.403636 GCGACAAAATTCATCTGTACTCCATT 60.404 38.462 0.00 0.00 0.00 3.16
2935 5496 4.201822 GGCGACAAAATTCATCTGTACTCC 60.202 45.833 0.00 0.00 0.00 3.85
2936 5497 4.631813 AGGCGACAAAATTCATCTGTACTC 59.368 41.667 0.00 0.00 0.00 2.59
2937 5498 4.393062 CAGGCGACAAAATTCATCTGTACT 59.607 41.667 0.00 0.00 0.00 2.73
2962 5523 6.717997 TGATCATTCATTCATTTCATCCCGAT 59.282 34.615 0.00 0.00 0.00 4.18
2971 5532 4.621068 ACGCGTGATCATTCATTCATTT 57.379 36.364 12.93 0.00 33.56 2.32
3122 5683 2.281484 ACAGCAACGTCCGCCAAT 60.281 55.556 6.32 0.00 0.00 3.16
3123 5684 2.970324 GACAGCAACGTCCGCCAA 60.970 61.111 6.32 0.00 0.00 4.52
3124 5685 4.980805 GGACAGCAACGTCCGCCA 62.981 66.667 6.32 0.00 45.77 5.69
3406 6646 1.479323 TCTAGTTGGATGCGTACCACC 59.521 52.381 0.00 0.00 37.13 4.61
3448 6690 6.418057 AAACACTCATAATCCCTGCAAAAA 57.582 33.333 0.00 0.00 0.00 1.94
3449 6691 6.267471 AGAAAACACTCATAATCCCTGCAAAA 59.733 34.615 0.00 0.00 0.00 2.44
3450 6692 5.774690 AGAAAACACTCATAATCCCTGCAAA 59.225 36.000 0.00 0.00 0.00 3.68
3451 6693 5.324409 AGAAAACACTCATAATCCCTGCAA 58.676 37.500 0.00 0.00 0.00 4.08
3452 6694 4.922206 AGAAAACACTCATAATCCCTGCA 58.078 39.130 0.00 0.00 0.00 4.41
3455 6697 6.151817 GCAGAAAGAAAACACTCATAATCCCT 59.848 38.462 0.00 0.00 0.00 4.20
3466 6708 1.314730 TCCCCGCAGAAAGAAAACAC 58.685 50.000 0.00 0.00 0.00 3.32
3477 6719 0.537188 ACAGTAGATGTTCCCCGCAG 59.463 55.000 0.00 0.00 39.96 5.18
3478 6720 1.479323 GTACAGTAGATGTTCCCCGCA 59.521 52.381 0.00 0.00 39.96 5.69
3535 6777 6.977502 GGTCATCCATCAGATCGATATTACAG 59.022 42.308 0.00 0.00 30.59 2.74
3615 6858 0.512952 GGCTCTGCGCATTAATACGG 59.487 55.000 12.24 0.00 41.67 4.02
3661 6904 5.915758 GTGTTCTACCATTACAGCTATCGAG 59.084 44.000 0.00 0.00 0.00 4.04
3708 6977 3.721087 ACCTTCACTGACCCCTAAATG 57.279 47.619 0.00 0.00 0.00 2.32
3823 7092 5.706833 AGACATACAATGTTGAATCTGTGCA 59.293 36.000 0.00 0.00 45.03 4.57
3852 7121 7.439655 CGGTTCTGAATTTAAATTTTTGTGGGA 59.560 33.333 14.45 3.94 0.00 4.37
3877 7146 5.576337 TTTTCTCTCGAGATGTGTTTTCG 57.424 39.130 17.03 0.52 37.29 3.46
3887 7156 9.489084 TGTTTCTTTCATATTTTTCTCTCGAGA 57.511 29.630 15.70 15.70 35.27 4.04
3912 7181 7.368059 CCAATCATCAATACCATCACTGAATG 58.632 38.462 0.00 0.00 0.00 2.67
3937 7206 3.988819 TCTGTTTGGCTGTAAAATTGGC 58.011 40.909 0.00 0.00 0.00 4.52
3945 7214 5.646360 GGTAGCTAATTTCTGTTTGGCTGTA 59.354 40.000 0.00 0.00 0.00 2.74
3948 7217 4.459337 GTGGTAGCTAATTTCTGTTTGGCT 59.541 41.667 0.00 0.14 0.00 4.75
3956 7225 6.034161 AGTTGTACGTGGTAGCTAATTTCT 57.966 37.500 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.