Multiple sequence alignment - TraesCS2D01G296300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G296300 chr2D 100.000 4997 0 0 1 4997 378727284 378722288 0.000000e+00 9228
1 TraesCS2D01G296300 chr2D 95.876 97 3 1 315 411 567672206 567672301 6.700000e-34 156
2 TraesCS2D01G296300 chr2A 93.151 4322 160 52 404 4616 513648235 513643941 0.000000e+00 6216
3 TraesCS2D01G296300 chr2A 92.647 272 6 4 1 258 513652710 513652439 3.650000e-101 379
4 TraesCS2D01G296300 chr2A 94.059 101 4 2 314 414 708044973 708044875 8.660000e-33 152
5 TraesCS2D01G296300 chr2A 92.929 99 6 1 310 407 386732368 386732270 5.210000e-30 143
6 TraesCS2D01G296300 chr2B 94.825 2879 108 19 407 3257 449842963 449840098 0.000000e+00 4453
7 TraesCS2D01G296300 chr2B 93.827 810 44 6 3294 4102 449840094 449839290 0.000000e+00 1214
8 TraesCS2D01G296300 chr2B 86.456 539 26 18 4096 4599 449839242 449838716 9.460000e-152 547
9 TraesCS2D01G296300 chr2B 94.231 260 5 4 1 254 449843308 449843053 6.070000e-104 388
10 TraesCS2D01G296300 chr2B 92.398 171 5 5 61 225 778226417 778226249 2.330000e-58 237
11 TraesCS2D01G296300 chr2B 89.720 107 9 2 309 414 542546601 542546496 8.730000e-28 135
12 TraesCS2D01G296300 chr5B 93.103 174 6 3 58 225 30594832 30595005 2.990000e-62 250
13 TraesCS2D01G296300 chr5B 80.978 368 19 17 407 756 326666419 326666085 1.390000e-60 244
14 TraesCS2D01G296300 chr5B 89.163 203 12 7 33 225 429198676 429198878 1.390000e-60 244
15 TraesCS2D01G296300 chr5B 89.340 197 12 3 569 756 30595250 30595446 6.470000e-59 239
16 TraesCS2D01G296300 chr7B 80.874 366 20 16 409 756 478897884 478897551 5.000000e-60 243
17 TraesCS2D01G296300 chr7B 89.381 113 7 5 301 411 465162853 465162744 2.430000e-28 137
18 TraesCS2D01G296300 chr3B 89.163 203 11 8 33 225 753113451 753113652 5.000000e-60 243
19 TraesCS2D01G296300 chr3B 89.340 197 12 3 569 756 753113897 753114093 6.470000e-59 239
20 TraesCS2D01G296300 chr3B 86.765 136 6 4 407 533 753113758 753113890 1.880000e-29 141
21 TraesCS2D01G296300 chr6B 91.954 174 8 3 58 225 542641364 542641537 6.470000e-59 239
22 TraesCS2D01G296300 chr6B 87.685 203 15 8 33 225 453170434 453170636 1.400000e-55 228
23 TraesCS2D01G296300 chr6B 98.864 88 1 0 319 406 574464728 574464815 1.860000e-34 158
24 TraesCS2D01G296300 chr4A 91.813 171 8 4 61 225 711196254 711196084 3.010000e-57 233
25 TraesCS2D01G296300 chr4A 97.753 89 2 0 319 407 142348613 142348525 2.410000e-33 154
26 TraesCS2D01G296300 chr4A 95.652 92 4 0 311 402 475917459 475917550 1.120000e-31 148
27 TraesCS2D01G296300 chr4A 91.509 106 9 0 301 406 735738970 735739075 4.030000e-31 147
28 TraesCS2D01G296300 chr1B 94.326 141 8 0 569 709 35321603 35321463 3.030000e-52 217
29 TraesCS2D01G296300 chr1B 91.589 107 9 0 322 428 550388396 550388502 1.120000e-31 148
30 TraesCS2D01G296300 chr4B 97.895 95 1 1 321 415 403270779 403270686 4.000000e-36 163
31 TraesCS2D01G296300 chr1A 96.842 95 2 1 319 412 589793165 589793259 1.860000e-34 158
32 TraesCS2D01G296300 chr3D 98.851 87 1 0 321 407 331017962 331018048 6.700000e-34 156
33 TraesCS2D01G296300 chr7D 92.929 99 5 2 309 406 33051129 33051226 5.210000e-30 143
34 TraesCS2D01G296300 chr7D 97.561 82 2 0 325 406 60490412 60490331 1.880000e-29 141
35 TraesCS2D01G296300 chr7A 89.524 105 10 1 303 406 679366439 679366335 1.130000e-26 132


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G296300 chr2D 378722288 378727284 4996 True 9228.000000 9228 100.000000 1 4997 1 chr2D.!!$R1 4996
1 TraesCS2D01G296300 chr2A 513643941 513648235 4294 True 6216.000000 6216 93.151000 404 4616 1 chr2A.!!$R2 4212
2 TraesCS2D01G296300 chr2B 449838716 449843308 4592 True 1650.500000 4453 92.334750 1 4599 4 chr2B.!!$R3 4598
3 TraesCS2D01G296300 chr5B 30594832 30595446 614 False 244.500000 250 91.221500 58 756 2 chr5B.!!$F2 698
4 TraesCS2D01G296300 chr3B 753113451 753114093 642 False 207.666667 243 88.422667 33 756 3 chr3B.!!$F1 723

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
230 237 0.109342 CCTTGTTGGTGAGCAGGACT 59.891 55.0 0.00 0.00 0.00 3.85 F
314 340 0.184451 CCTTGCATCTGGCCTATGGT 59.816 55.0 17.15 0.00 43.89 3.55 F
537 619 0.327480 ATCATGTAGGAGTGGGGGCA 60.327 55.0 0.00 0.00 0.00 5.36 F
2422 2546 0.319813 GTGCCTTGCCCATTGTTGAC 60.320 55.0 0.00 0.00 0.00 3.18 F
3845 3973 0.321298 TGAGGCCGTAAGCTTTGGTC 60.321 55.0 3.20 9.26 43.05 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1398 1521 0.314935 CATGCCCGCCATTATGAACC 59.685 55.000 0.00 0.0 29.71 3.62 R
1903 2026 4.184649 TCTCTACATGCTCATGAGGGTA 57.815 45.455 23.89 0.0 41.20 3.69 R
2459 2583 7.876936 TGGAGTATACGATAAGACTCTTTGT 57.123 36.000 0.00 0.0 38.68 2.83 R
3894 4025 0.182537 CCACACTCCCAACACTTCCA 59.817 55.000 0.00 0.0 0.00 3.53 R
4824 5049 0.108329 CCTAATGAGCCCACGAACGT 60.108 55.000 0.00 0.0 0.00 3.99 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 0.318441 TCTGCGCTGTTTCTAGCTGT 59.682 50.000 9.73 0.00 41.51 4.40
51 52 1.151668 CTGCGCTGTTTCTAGCTGTT 58.848 50.000 9.73 0.00 41.51 3.16
52 53 0.867746 TGCGCTGTTTCTAGCTGTTG 59.132 50.000 9.73 0.00 41.51 3.33
53 54 0.453449 GCGCTGTTTCTAGCTGTTGC 60.453 55.000 0.00 0.00 41.51 4.17
230 237 0.109342 CCTTGTTGGTGAGCAGGACT 59.891 55.000 0.00 0.00 0.00 3.85
239 249 2.925170 AGCAGGACTCCGGTGCTT 60.925 61.111 10.52 0.00 45.31 3.91
254 264 4.151512 CCGGTGCTTTGCGATTTTATTTTT 59.848 37.500 0.00 0.00 0.00 1.94
255 265 5.346281 CCGGTGCTTTGCGATTTTATTTTTA 59.654 36.000 0.00 0.00 0.00 1.52
256 266 6.128795 CCGGTGCTTTGCGATTTTATTTTTAA 60.129 34.615 0.00 0.00 0.00 1.52
257 267 6.947680 CGGTGCTTTGCGATTTTATTTTTAAG 59.052 34.615 0.00 0.00 0.00 1.85
258 268 7.358848 CGGTGCTTTGCGATTTTATTTTTAAGT 60.359 33.333 0.00 0.00 0.00 2.24
259 269 8.917655 GGTGCTTTGCGATTTTATTTTTAAGTA 58.082 29.630 0.00 0.00 0.00 2.24
293 319 0.958091 TGCGGCTATGCTTGTGTTTT 59.042 45.000 0.00 0.00 35.36 2.43
297 323 2.228822 CGGCTATGCTTGTGTTTTTCCT 59.771 45.455 0.00 0.00 0.00 3.36
299 325 3.989817 GGCTATGCTTGTGTTTTTCCTTG 59.010 43.478 0.00 0.00 0.00 3.61
300 326 3.429881 GCTATGCTTGTGTTTTTCCTTGC 59.570 43.478 0.00 0.00 0.00 4.01
301 327 3.540314 ATGCTTGTGTTTTTCCTTGCA 57.460 38.095 0.00 0.00 0.00 4.08
302 328 3.540314 TGCTTGTGTTTTTCCTTGCAT 57.460 38.095 0.00 0.00 0.00 3.96
303 329 3.456280 TGCTTGTGTTTTTCCTTGCATC 58.544 40.909 0.00 0.00 0.00 3.91
304 330 3.132646 TGCTTGTGTTTTTCCTTGCATCT 59.867 39.130 0.00 0.00 0.00 2.90
305 331 3.492011 GCTTGTGTTTTTCCTTGCATCTG 59.508 43.478 0.00 0.00 0.00 2.90
307 333 2.224018 TGTGTTTTTCCTTGCATCTGGC 60.224 45.455 0.00 0.00 45.13 4.85
310 336 2.825532 GTTTTTCCTTGCATCTGGCCTA 59.174 45.455 3.32 0.00 43.89 3.93
311 337 3.386932 TTTTCCTTGCATCTGGCCTAT 57.613 42.857 3.32 0.00 43.89 2.57
312 338 2.353357 TTCCTTGCATCTGGCCTATG 57.647 50.000 3.32 9.36 43.89 2.23
314 340 0.184451 CCTTGCATCTGGCCTATGGT 59.816 55.000 17.15 0.00 43.89 3.55
317 343 0.392706 TGCATCTGGCCTATGGTACG 59.607 55.000 17.15 0.00 43.89 3.67
319 345 1.616865 GCATCTGGCCTATGGTACGTA 59.383 52.381 17.15 0.00 36.11 3.57
323 349 7.010156 GCATCTGGCCTATGGTACGTAGTAA 62.010 48.000 17.15 0.00 40.33 2.24
325 351 9.906575 GCATCTGGCCTATGGTACGTAGTAATC 62.907 48.148 17.15 0.00 40.33 1.75
339 365 7.944729 ACGTAGTAATCCCTCTGTAAACTAA 57.055 36.000 0.00 0.00 41.94 2.24
340 366 8.530804 ACGTAGTAATCCCTCTGTAAACTAAT 57.469 34.615 0.00 0.00 41.94 1.73
341 367 9.632638 ACGTAGTAATCCCTCTGTAAACTAATA 57.367 33.333 0.00 0.00 41.94 0.98
349 375 7.883217 TCCCTCTGTAAACTAATATAAGAGCG 58.117 38.462 0.00 0.00 0.00 5.03
350 376 7.504911 TCCCTCTGTAAACTAATATAAGAGCGT 59.495 37.037 0.00 0.00 0.00 5.07
351 377 8.142551 CCCTCTGTAAACTAATATAAGAGCGTT 58.857 37.037 0.00 0.00 0.00 4.84
352 378 9.530633 CCTCTGTAAACTAATATAAGAGCGTTT 57.469 33.333 0.00 0.00 0.00 3.60
397 423 9.669353 TCTAAACGCTCTTATATTAGTTTACGG 57.331 33.333 0.00 0.00 34.29 4.02
398 424 9.669353 CTAAACGCTCTTATATTAGTTTACGGA 57.331 33.333 0.00 0.00 34.29 4.69
399 425 8.571461 AAACGCTCTTATATTAGTTTACGGAG 57.429 34.615 0.00 0.00 31.14 4.63
400 426 6.675987 ACGCTCTTATATTAGTTTACGGAGG 58.324 40.000 0.00 0.00 0.00 4.30
401 427 6.091437 CGCTCTTATATTAGTTTACGGAGGG 58.909 44.000 0.00 0.00 0.00 4.30
402 428 6.072286 CGCTCTTATATTAGTTTACGGAGGGA 60.072 42.308 0.00 0.00 34.63 4.20
403 429 7.314393 GCTCTTATATTAGTTTACGGAGGGAG 58.686 42.308 0.00 0.00 0.00 4.30
404 430 7.039853 GCTCTTATATTAGTTTACGGAGGGAGT 60.040 40.741 0.00 0.00 0.00 3.85
405 431 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
473 514 4.025750 TGATTGCGCGATTCGTTATTTTC 58.974 39.130 12.10 0.00 41.07 2.29
496 541 1.352622 TGTGTTGTCCAAGGCCTCCT 61.353 55.000 5.23 0.00 33.87 3.69
505 550 1.479389 CCAAGGCCTCCTCACTTGTTT 60.479 52.381 5.23 0.00 39.85 2.83
506 551 1.882623 CAAGGCCTCCTCACTTGTTTC 59.117 52.381 5.23 0.00 37.43 2.78
507 552 0.402121 AGGCCTCCTCACTTGTTTCC 59.598 55.000 0.00 0.00 0.00 3.13
509 554 1.202940 GGCCTCCTCACTTGTTTCCTT 60.203 52.381 0.00 0.00 0.00 3.36
511 556 2.508526 CCTCCTCACTTGTTTCCTTGG 58.491 52.381 0.00 0.00 0.00 3.61
512 557 2.106511 CCTCCTCACTTGTTTCCTTGGA 59.893 50.000 0.00 0.00 0.00 3.53
513 558 3.245052 CCTCCTCACTTGTTTCCTTGGAT 60.245 47.826 0.00 0.00 0.00 3.41
514 559 4.401925 CTCCTCACTTGTTTCCTTGGATT 58.598 43.478 0.00 0.00 0.00 3.01
535 617 6.353082 GGATTATTATCATGTAGGAGTGGGGG 60.353 46.154 0.00 0.00 32.09 5.40
536 618 1.729586 TATCATGTAGGAGTGGGGGC 58.270 55.000 0.00 0.00 0.00 5.80
537 619 0.327480 ATCATGTAGGAGTGGGGGCA 60.327 55.000 0.00 0.00 0.00 5.36
538 620 0.327480 TCATGTAGGAGTGGGGGCAT 60.327 55.000 0.00 0.00 0.00 4.40
540 622 1.063717 CATGTAGGAGTGGGGGCATTT 60.064 52.381 0.00 0.00 0.00 2.32
541 623 0.623723 TGTAGGAGTGGGGGCATTTC 59.376 55.000 0.00 0.00 0.00 2.17
542 624 0.919710 GTAGGAGTGGGGGCATTTCT 59.080 55.000 0.00 0.00 0.00 2.52
544 626 0.786435 AGGAGTGGGGGCATTTCTTT 59.214 50.000 0.00 0.00 0.00 2.52
545 627 0.897621 GGAGTGGGGGCATTTCTTTG 59.102 55.000 0.00 0.00 0.00 2.77
554 638 2.165998 GGCATTTCTTTGCTCCTCTGT 58.834 47.619 0.00 0.00 42.38 3.41
565 649 1.834856 CTCCTCTGTTGGCTGCAGGA 61.835 60.000 17.12 2.85 34.89 3.86
613 717 1.133790 GTGCCTGTCATGAGCATTTCC 59.866 52.381 10.88 0.00 39.04 3.13
659 768 9.973246 GATATTATGATTGTTGCTGTTATACCG 57.027 33.333 0.00 0.00 0.00 4.02
745 863 3.446873 TGTGCGATTTTGGGCAAGAATAT 59.553 39.130 0.00 0.00 41.46 1.28
770 888 5.316167 ACTGATAAAGTTGGTCAGCAATCA 58.684 37.500 14.47 0.00 42.33 2.57
805 923 2.433970 TGACATATCGGGCACTCAATCA 59.566 45.455 0.00 0.00 0.00 2.57
987 1110 7.465245 GCCGATTGTTTTCTCAATCTAGAAGAG 60.465 40.741 15.79 15.79 46.46 2.85
1185 1308 3.751479 AAAGAAAGGCGGCAAAGATTT 57.249 38.095 13.08 1.66 0.00 2.17
1227 1350 6.043938 TGGATGACTTAGGTTCCACTAAAGTT 59.956 38.462 0.00 0.00 33.40 2.66
1398 1521 7.295322 TCTGGATAGTGGAAAGAGATATGTG 57.705 40.000 0.00 0.00 0.00 3.21
1692 1815 3.738281 GCTGCACGACAAGTATACCATCT 60.738 47.826 0.00 0.00 0.00 2.90
1903 2026 7.039722 TCTAAAATGTATGGGGGAGAAAACT 57.960 36.000 0.00 0.00 0.00 2.66
2017 2140 3.334583 TTCACATTACAGAGAGCCCAC 57.665 47.619 0.00 0.00 0.00 4.61
2144 2267 5.880332 GCTCATACTCAACCTACATTTTGGA 59.120 40.000 0.00 0.00 0.00 3.53
2170 2293 9.466497 ACTGAAATACCATGATTGTCTGTTAAT 57.534 29.630 0.00 0.00 0.00 1.40
2422 2546 0.319813 GTGCCTTGCCCATTGTTGAC 60.320 55.000 0.00 0.00 0.00 3.18
2459 2583 7.925043 TCTACTGGTTTTGTTGTTTTAGTGA 57.075 32.000 0.00 0.00 0.00 3.41
2690 2814 4.063689 CCAGGAATGTCATATCTGCTGTC 58.936 47.826 8.88 0.00 0.00 3.51
2852 2977 6.860539 CGATCAATCAGGTACATAGAAGTCAG 59.139 42.308 0.00 0.00 0.00 3.51
2896 3021 9.296400 GTTTTTGTTACTTTGCATGTCTCTTAA 57.704 29.630 0.00 0.00 0.00 1.85
3148 3273 6.014413 GTGATTCCCCTAGATTCCTAGTTACC 60.014 46.154 0.00 0.00 40.57 2.85
3190 3315 4.635223 GAGTTGCTGATGGTGCTGATATA 58.365 43.478 0.00 0.00 0.00 0.86
3278 3403 4.979197 TGCCATTTTCACATGTTTACGTTC 59.021 37.500 0.00 0.00 0.00 3.95
3284 3409 5.351233 TTCACATGTTTACGTTCCATGAC 57.649 39.130 21.32 3.30 38.56 3.06
3354 3479 3.589988 GAAGTCGAAGGCTCTTTCATCA 58.410 45.455 0.00 0.00 40.46 3.07
3360 3485 2.322355 AGGCTCTTTCATCACCATCG 57.678 50.000 0.00 0.00 0.00 3.84
3439 3564 3.963665 TGGAATTTTGACAACTCAAGCG 58.036 40.909 0.00 0.00 37.70 4.68
3578 3703 1.021390 CGCTTGCCCGAGAAATCTGT 61.021 55.000 0.00 0.00 0.00 3.41
3606 3731 4.195308 GCTTTACGCCGTCATGGA 57.805 55.556 0.00 0.00 42.00 3.41
3612 3740 1.101635 TACGCCGTCATGGAGGAGAG 61.102 60.000 15.37 7.07 42.78 3.20
3642 3770 0.321564 CTGGGACATGGTTCTTCGCA 60.322 55.000 0.00 0.00 38.20 5.10
3645 3773 1.407437 GGGACATGGTTCTTCGCAGAT 60.407 52.381 0.00 0.00 35.04 2.90
3696 3824 2.528797 GAAGCTCACTTCGGCGAAA 58.471 52.632 23.81 8.09 42.79 3.46
3702 3830 0.878523 TCACTTCGGCGAAACCTGTG 60.879 55.000 24.99 24.99 35.61 3.66
3771 3899 0.901827 ACATGGTGATAGTGACGGCA 59.098 50.000 0.00 0.00 0.00 5.69
3832 3960 1.589716 GCCTGTGACATTGTGAGGCC 61.590 60.000 15.64 0.00 42.97 5.19
3845 3973 0.321298 TGAGGCCGTAAGCTTTGGTC 60.321 55.000 3.20 9.26 43.05 4.02
3925 4056 1.343069 GAGTGTGGTGGAAGAGAGGT 58.657 55.000 0.00 0.00 0.00 3.85
3954 4086 4.112634 AGCACCAACAAAAGAGGGAATA 57.887 40.909 0.00 0.00 0.00 1.75
3982 4114 2.073101 GGGGGTCCCTAGCTTCTGG 61.073 68.421 8.15 0.00 41.34 3.86
4031 4163 2.095819 GCTTTTGTCTGCAAGCTCTCTC 60.096 50.000 0.00 0.00 41.93 3.20
4033 4165 2.739885 TTGTCTGCAAGCTCTCTCTC 57.260 50.000 0.00 0.00 0.00 3.20
4209 4395 2.739913 CCTGATGTTTTGGCTGCATTTG 59.260 45.455 0.50 0.00 0.00 2.32
4210 4396 2.739913 CTGATGTTTTGGCTGCATTTGG 59.260 45.455 0.50 0.00 0.00 3.28
4342 4536 1.542915 TCGGTACAGAAAGCGCTACTT 59.457 47.619 12.05 0.70 41.70 2.24
4353 4547 2.350522 AGCGCTACTTGAATGTTCCAG 58.649 47.619 8.99 0.00 0.00 3.86
4499 4702 1.467543 CCTGATGACGACGTTCACGAT 60.468 52.381 6.30 0.00 43.02 3.73
4527 4747 0.250124 TTGCTCGTACAACACAGGGG 60.250 55.000 0.00 0.00 0.00 4.79
4536 4756 2.391130 AACACAGGGGGCCAACAGA 61.391 57.895 4.39 0.00 0.00 3.41
4537 4757 2.034687 CACAGGGGGCCAACAGAG 59.965 66.667 4.39 0.00 0.00 3.35
4556 4776 1.530655 TGAGTGACGGGTCTGCAGA 60.531 57.895 13.74 13.74 0.00 4.26
4557 4777 0.900182 TGAGTGACGGGTCTGCAGAT 60.900 55.000 21.47 2.86 0.00 2.90
4564 4784 2.025155 ACGGGTCTGCAGATAGTGTAG 58.975 52.381 21.47 9.79 40.14 2.74
4565 4785 1.269309 CGGGTCTGCAGATAGTGTAGC 60.269 57.143 21.47 4.74 38.71 3.58
4588 4809 2.066700 TTGTGGGCCTGTGCTGATGA 62.067 55.000 4.53 0.00 37.74 2.92
4616 4841 6.509418 TTTTCTGTTAATCATGGTGCTACC 57.491 37.500 0.00 0.00 39.22 3.18
4617 4842 5.435686 TTCTGTTAATCATGGTGCTACCT 57.564 39.130 6.83 0.00 39.58 3.08
4618 4843 5.023533 TCTGTTAATCATGGTGCTACCTC 57.976 43.478 6.83 0.00 39.58 3.85
4619 4844 3.792401 TGTTAATCATGGTGCTACCTCG 58.208 45.455 6.83 0.00 39.58 4.63
4620 4845 2.526304 TAATCATGGTGCTACCTCGC 57.474 50.000 6.83 0.00 39.58 5.03
4621 4846 0.833287 AATCATGGTGCTACCTCGCT 59.167 50.000 6.83 0.00 39.58 4.93
4622 4847 0.105593 ATCATGGTGCTACCTCGCTG 59.894 55.000 6.83 1.27 39.58 5.18
4623 4848 1.219124 CATGGTGCTACCTCGCTGT 59.781 57.895 6.83 0.00 39.58 4.40
4624 4849 0.391661 CATGGTGCTACCTCGCTGTT 60.392 55.000 6.83 0.00 39.58 3.16
4625 4850 0.324943 ATGGTGCTACCTCGCTGTTT 59.675 50.000 6.83 0.00 39.58 2.83
4626 4851 0.602638 TGGTGCTACCTCGCTGTTTG 60.603 55.000 6.83 0.00 39.58 2.93
4627 4852 1.298859 GGTGCTACCTCGCTGTTTGG 61.299 60.000 0.00 0.00 34.73 3.28
4628 4853 0.602905 GTGCTACCTCGCTGTTTGGT 60.603 55.000 0.00 0.00 37.83 3.67
4629 4854 0.107831 TGCTACCTCGCTGTTTGGTT 59.892 50.000 0.00 0.00 35.48 3.67
4630 4855 0.517316 GCTACCTCGCTGTTTGGTTG 59.483 55.000 0.00 0.00 35.48 3.77
4631 4856 1.876416 GCTACCTCGCTGTTTGGTTGA 60.876 52.381 0.00 0.00 35.48 3.18
4632 4857 2.069273 CTACCTCGCTGTTTGGTTGAG 58.931 52.381 0.00 0.00 35.48 3.02
4633 4858 0.468226 ACCTCGCTGTTTGGTTGAGA 59.532 50.000 0.00 0.00 0.00 3.27
4634 4859 0.868406 CCTCGCTGTTTGGTTGAGAC 59.132 55.000 0.00 0.00 0.00 3.36
4635 4860 0.868406 CTCGCTGTTTGGTTGAGACC 59.132 55.000 0.00 0.00 46.71 3.85
4636 4861 0.468226 TCGCTGTTTGGTTGAGACCT 59.532 50.000 0.00 0.00 46.66 3.85
4637 4862 0.588252 CGCTGTTTGGTTGAGACCTG 59.412 55.000 0.00 0.00 46.66 4.00
4638 4863 0.954452 GCTGTTTGGTTGAGACCTGG 59.046 55.000 0.00 0.00 46.66 4.45
4639 4864 1.609208 CTGTTTGGTTGAGACCTGGG 58.391 55.000 0.00 0.00 46.66 4.45
4640 4865 1.142870 CTGTTTGGTTGAGACCTGGGA 59.857 52.381 0.00 0.00 46.66 4.37
4641 4866 1.566703 TGTTTGGTTGAGACCTGGGAA 59.433 47.619 0.00 0.00 46.66 3.97
4642 4867 1.954382 GTTTGGTTGAGACCTGGGAAC 59.046 52.381 0.00 0.00 46.66 3.62
4643 4868 1.217916 TTGGTTGAGACCTGGGAACA 58.782 50.000 0.00 0.00 46.66 3.18
4656 4881 2.846193 TGGGAACAGTAAGACAAGTGC 58.154 47.619 0.00 0.00 35.01 4.40
4657 4882 2.171659 TGGGAACAGTAAGACAAGTGCA 59.828 45.455 0.00 0.00 35.01 4.57
4658 4883 2.548480 GGGAACAGTAAGACAAGTGCAC 59.452 50.000 9.40 9.40 0.00 4.57
4659 4884 3.467803 GGAACAGTAAGACAAGTGCACT 58.532 45.455 15.25 15.25 0.00 4.40
4660 4885 4.502604 GGGAACAGTAAGACAAGTGCACTA 60.503 45.833 22.01 0.00 0.00 2.74
4661 4886 4.686554 GGAACAGTAAGACAAGTGCACTAG 59.313 45.833 22.01 4.44 0.00 2.57
4662 4887 4.258702 ACAGTAAGACAAGTGCACTAGG 57.741 45.455 22.01 17.80 0.00 3.02
4663 4888 3.895656 ACAGTAAGACAAGTGCACTAGGA 59.104 43.478 22.01 0.00 0.00 2.94
4664 4889 4.021894 ACAGTAAGACAAGTGCACTAGGAG 60.022 45.833 22.01 12.93 0.00 3.69
4665 4890 2.464157 AAGACAAGTGCACTAGGAGC 57.536 50.000 22.01 12.61 0.00 4.70
4666 4891 1.342074 AGACAAGTGCACTAGGAGCA 58.658 50.000 22.01 7.91 40.19 4.26
4667 4892 1.274728 AGACAAGTGCACTAGGAGCAG 59.725 52.381 22.01 6.86 43.63 4.24
4668 4893 0.321122 ACAAGTGCACTAGGAGCAGC 60.321 55.000 22.01 7.76 43.63 5.25
4669 4894 1.023513 CAAGTGCACTAGGAGCAGCC 61.024 60.000 22.01 2.86 43.63 4.85
4670 4895 2.124942 GTGCACTAGGAGCAGCCC 60.125 66.667 10.32 0.00 43.63 5.19
4671 4896 2.607442 TGCACTAGGAGCAGCCCA 60.607 61.111 7.91 0.00 37.02 5.36
4672 4897 2.124942 GCACTAGGAGCAGCCCAC 60.125 66.667 4.74 0.00 37.37 4.61
4673 4898 2.586792 CACTAGGAGCAGCCCACC 59.413 66.667 0.00 0.00 37.37 4.61
4674 4899 1.992277 CACTAGGAGCAGCCCACCT 60.992 63.158 8.22 8.22 37.37 4.00
4675 4900 1.687493 ACTAGGAGCAGCCCACCTC 60.687 63.158 6.66 0.00 37.37 3.85
4676 4901 2.759973 TAGGAGCAGCCCACCTCG 60.760 66.667 6.66 0.00 37.37 4.63
4677 4902 3.602075 TAGGAGCAGCCCACCTCGT 62.602 63.158 6.66 0.00 37.37 4.18
4678 4903 4.767255 GGAGCAGCCCACCTCGTG 62.767 72.222 0.00 0.00 0.00 4.35
4690 4915 3.951979 CACCTCGTGGAGATTTAATGC 57.048 47.619 11.17 0.00 37.04 3.56
4691 4916 3.535561 CACCTCGTGGAGATTTAATGCT 58.464 45.455 11.17 0.00 37.04 3.79
4692 4917 3.310774 CACCTCGTGGAGATTTAATGCTG 59.689 47.826 11.17 0.00 37.04 4.41
4693 4918 2.289002 CCTCGTGGAGATTTAATGCTGC 59.711 50.000 0.00 0.00 34.57 5.25
4694 4919 2.938451 CTCGTGGAGATTTAATGCTGCA 59.062 45.455 4.13 4.13 0.00 4.41
4695 4920 2.938451 TCGTGGAGATTTAATGCTGCAG 59.062 45.455 10.11 10.11 33.04 4.41
4696 4921 2.540361 CGTGGAGATTTAATGCTGCAGC 60.540 50.000 31.89 31.89 42.50 5.25
4707 4932 3.761481 GCTGCAGCAACTACTTGTG 57.239 52.632 33.36 0.00 41.59 3.33
4708 4933 0.386478 GCTGCAGCAACTACTTGTGC 60.386 55.000 33.36 1.32 41.59 4.57
4709 4934 0.110509 CTGCAGCAACTACTTGTGCG 60.111 55.000 0.00 0.00 37.29 5.34
4710 4935 1.441016 GCAGCAACTACTTGTGCGC 60.441 57.895 0.00 0.00 30.22 6.09
4711 4936 1.845809 GCAGCAACTACTTGTGCGCT 61.846 55.000 9.73 0.00 38.34 5.92
4712 4937 0.110509 CAGCAACTACTTGTGCGCTG 60.111 55.000 9.73 0.00 44.22 5.18
4713 4938 1.441016 GCAACTACTTGTGCGCTGC 60.441 57.895 9.73 2.25 0.00 5.25
4714 4939 1.941072 CAACTACTTGTGCGCTGCA 59.059 52.632 9.73 4.86 35.60 4.41
4715 4940 0.307453 CAACTACTTGTGCGCTGCAA 59.693 50.000 9.73 13.11 41.47 4.08
4716 4941 0.307760 AACTACTTGTGCGCTGCAAC 59.692 50.000 9.73 0.00 41.47 4.17
4717 4942 1.154599 CTACTTGTGCGCTGCAACG 60.155 57.895 9.73 4.85 41.47 4.10
4718 4943 2.498761 CTACTTGTGCGCTGCAACGG 62.499 60.000 12.02 6.03 41.47 4.44
4719 4944 4.688419 CTTGTGCGCTGCAACGGG 62.688 66.667 12.02 0.00 41.47 5.28
4725 4950 3.357079 CGCTGCAACGGGCTTCTT 61.357 61.111 0.45 0.00 45.15 2.52
4726 4951 2.563427 GCTGCAACGGGCTTCTTC 59.437 61.111 0.00 0.00 45.15 2.87
4727 4952 2.982744 GCTGCAACGGGCTTCTTCC 61.983 63.158 0.00 0.00 45.15 3.46
4728 4953 1.600636 CTGCAACGGGCTTCTTCCA 60.601 57.895 3.00 0.00 45.15 3.53
4729 4954 0.962356 CTGCAACGGGCTTCTTCCAT 60.962 55.000 3.00 0.00 45.15 3.41
4730 4955 0.960364 TGCAACGGGCTTCTTCCATC 60.960 55.000 3.00 0.00 45.15 3.51
4731 4956 0.678048 GCAACGGGCTTCTTCCATCT 60.678 55.000 0.00 0.00 40.25 2.90
4732 4957 1.826385 CAACGGGCTTCTTCCATCTT 58.174 50.000 0.00 0.00 0.00 2.40
4733 4958 2.939640 GCAACGGGCTTCTTCCATCTTA 60.940 50.000 0.00 0.00 40.25 2.10
4734 4959 2.939103 CAACGGGCTTCTTCCATCTTAG 59.061 50.000 0.00 0.00 0.00 2.18
4735 4960 2.467880 ACGGGCTTCTTCCATCTTAGA 58.532 47.619 0.00 0.00 0.00 2.10
4736 4961 3.041946 ACGGGCTTCTTCCATCTTAGAT 58.958 45.455 0.00 0.00 0.00 1.98
4737 4962 3.070302 ACGGGCTTCTTCCATCTTAGATC 59.930 47.826 0.00 0.00 0.00 2.75
4738 4963 3.070159 CGGGCTTCTTCCATCTTAGATCA 59.930 47.826 0.00 0.00 0.00 2.92
4739 4964 4.262808 CGGGCTTCTTCCATCTTAGATCAT 60.263 45.833 0.00 0.00 0.00 2.45
4740 4965 5.244755 GGGCTTCTTCCATCTTAGATCATC 58.755 45.833 0.00 0.00 0.00 2.92
4741 4966 5.221803 GGGCTTCTTCCATCTTAGATCATCA 60.222 44.000 0.00 0.00 0.00 3.07
4742 4967 5.700373 GGCTTCTTCCATCTTAGATCATCAC 59.300 44.000 0.00 0.00 0.00 3.06
4743 4968 5.700373 GCTTCTTCCATCTTAGATCATCACC 59.300 44.000 0.00 0.00 0.00 4.02
4744 4969 6.687393 GCTTCTTCCATCTTAGATCATCACCA 60.687 42.308 0.00 0.00 0.00 4.17
4745 4970 7.384524 TTCTTCCATCTTAGATCATCACCAT 57.615 36.000 0.00 0.00 0.00 3.55
4746 4971 7.002250 TCTTCCATCTTAGATCATCACCATC 57.998 40.000 0.00 0.00 0.00 3.51
4747 4972 5.752036 TCCATCTTAGATCATCACCATCC 57.248 43.478 0.00 0.00 0.00 3.51
4748 4973 5.409712 TCCATCTTAGATCATCACCATCCT 58.590 41.667 0.00 0.00 0.00 3.24
4749 4974 6.565036 TCCATCTTAGATCATCACCATCCTA 58.435 40.000 0.00 0.00 0.00 2.94
4750 4975 7.194761 TCCATCTTAGATCATCACCATCCTAT 58.805 38.462 0.00 0.00 0.00 2.57
4751 4976 7.681598 TCCATCTTAGATCATCACCATCCTATT 59.318 37.037 0.00 0.00 0.00 1.73
4752 4977 8.327271 CCATCTTAGATCATCACCATCCTATTT 58.673 37.037 0.00 0.00 0.00 1.40
4753 4978 9.736414 CATCTTAGATCATCACCATCCTATTTT 57.264 33.333 0.00 0.00 0.00 1.82
4758 4983 6.939163 AGATCATCACCATCCTATTTTACAGC 59.061 38.462 0.00 0.00 0.00 4.40
4759 4984 6.252599 TCATCACCATCCTATTTTACAGCT 57.747 37.500 0.00 0.00 0.00 4.24
4760 4985 6.291377 TCATCACCATCCTATTTTACAGCTC 58.709 40.000 0.00 0.00 0.00 4.09
4761 4986 5.036117 TCACCATCCTATTTTACAGCTCC 57.964 43.478 0.00 0.00 0.00 4.70
4762 4987 3.809832 CACCATCCTATTTTACAGCTCCG 59.190 47.826 0.00 0.00 0.00 4.63
4763 4988 3.181454 ACCATCCTATTTTACAGCTCCGG 60.181 47.826 0.00 0.00 0.00 5.14
4764 4989 3.071023 CCATCCTATTTTACAGCTCCGGA 59.929 47.826 2.93 2.93 0.00 5.14
4765 4990 4.444306 CCATCCTATTTTACAGCTCCGGAA 60.444 45.833 5.23 0.00 0.00 4.30
4766 4991 4.402056 TCCTATTTTACAGCTCCGGAAG 57.598 45.455 5.23 0.46 0.00 3.46
4781 5006 2.242047 GGAAGGCCGAATAGAGGTTC 57.758 55.000 0.00 0.00 0.00 3.62
4782 5007 1.763545 GGAAGGCCGAATAGAGGTTCT 59.236 52.381 0.00 0.00 0.00 3.01
4783 5008 2.963782 GGAAGGCCGAATAGAGGTTCTA 59.036 50.000 0.00 0.00 32.87 2.10
4784 5009 3.387050 GGAAGGCCGAATAGAGGTTCTAA 59.613 47.826 0.00 0.00 31.96 2.10
4785 5010 4.501743 GGAAGGCCGAATAGAGGTTCTAAG 60.502 50.000 0.00 0.00 31.96 2.18
4786 5011 3.912248 AGGCCGAATAGAGGTTCTAAGA 58.088 45.455 0.00 0.00 31.96 2.10
4787 5012 3.892588 AGGCCGAATAGAGGTTCTAAGAG 59.107 47.826 0.00 0.00 31.96 2.85
4788 5013 3.553302 GGCCGAATAGAGGTTCTAAGAGC 60.553 52.174 0.00 0.00 31.96 4.09
4789 5014 3.068307 GCCGAATAGAGGTTCTAAGAGCA 59.932 47.826 0.00 0.00 31.96 4.26
4790 5015 4.262249 GCCGAATAGAGGTTCTAAGAGCAT 60.262 45.833 0.00 0.00 31.96 3.79
4791 5016 5.465935 CCGAATAGAGGTTCTAAGAGCATC 58.534 45.833 0.00 0.00 31.96 3.91
4807 5032 5.604010 GAGCATCTACAATCATAGTTGGC 57.396 43.478 0.00 0.00 33.40 4.52
4808 5033 5.039920 AGCATCTACAATCATAGTTGGCA 57.960 39.130 0.00 0.00 33.40 4.92
4809 5034 5.628130 AGCATCTACAATCATAGTTGGCAT 58.372 37.500 0.00 0.00 33.40 4.40
4810 5035 6.772605 AGCATCTACAATCATAGTTGGCATA 58.227 36.000 0.00 0.00 33.40 3.14
4811 5036 7.400439 AGCATCTACAATCATAGTTGGCATAT 58.600 34.615 0.00 0.00 33.40 1.78
4812 5037 7.551974 AGCATCTACAATCATAGTTGGCATATC 59.448 37.037 0.00 0.00 33.40 1.63
4813 5038 7.551974 GCATCTACAATCATAGTTGGCATATCT 59.448 37.037 0.00 0.00 33.40 1.98
4814 5039 8.880750 CATCTACAATCATAGTTGGCATATCTG 58.119 37.037 0.00 0.00 33.40 2.90
4815 5040 7.389232 TCTACAATCATAGTTGGCATATCTGG 58.611 38.462 0.00 0.00 33.40 3.86
4816 5041 5.319453 ACAATCATAGTTGGCATATCTGGG 58.681 41.667 0.00 0.00 33.40 4.45
4817 5042 3.423539 TCATAGTTGGCATATCTGGGC 57.576 47.619 0.00 0.00 0.00 5.36
4825 5050 3.283259 GGCATATCTGGGCCCTTATAC 57.717 52.381 25.70 11.83 44.53 1.47
4826 5051 2.420129 GGCATATCTGGGCCCTTATACG 60.420 54.545 25.70 13.97 44.53 3.06
4827 5052 2.236395 GCATATCTGGGCCCTTATACGT 59.764 50.000 25.70 3.90 0.00 3.57
4828 5053 3.307480 GCATATCTGGGCCCTTATACGTT 60.307 47.826 25.70 3.18 0.00 3.99
4829 5054 4.504858 CATATCTGGGCCCTTATACGTTC 58.495 47.826 25.70 0.00 0.00 3.95
4830 5055 0.748450 TCTGGGCCCTTATACGTTCG 59.252 55.000 25.70 0.00 0.00 3.95
4831 5056 0.462789 CTGGGCCCTTATACGTTCGT 59.537 55.000 25.70 2.91 0.00 3.85
4832 5057 0.176219 TGGGCCCTTATACGTTCGTG 59.824 55.000 25.70 0.00 0.00 4.35
4833 5058 0.531311 GGGCCCTTATACGTTCGTGG 60.531 60.000 17.04 1.59 0.00 4.94
4834 5059 0.531311 GGCCCTTATACGTTCGTGGG 60.531 60.000 12.20 12.20 37.76 4.61
4835 5060 2.981997 CCCTTATACGTTCGTGGGC 58.018 57.895 8.14 0.00 0.00 5.36
4836 5061 0.462789 CCCTTATACGTTCGTGGGCT 59.537 55.000 8.14 0.00 0.00 5.19
4837 5062 1.537562 CCCTTATACGTTCGTGGGCTC 60.538 57.143 8.14 0.00 0.00 4.70
4838 5063 1.135527 CCTTATACGTTCGTGGGCTCA 59.864 52.381 8.14 0.00 0.00 4.26
4839 5064 2.223971 CCTTATACGTTCGTGGGCTCAT 60.224 50.000 8.14 0.00 0.00 2.90
4840 5065 3.454375 CTTATACGTTCGTGGGCTCATT 58.546 45.455 8.14 0.00 0.00 2.57
4841 5066 4.500205 CCTTATACGTTCGTGGGCTCATTA 60.500 45.833 8.14 0.00 0.00 1.90
4842 5067 2.572191 TACGTTCGTGGGCTCATTAG 57.428 50.000 8.14 0.00 0.00 1.73
4843 5068 0.108329 ACGTTCGTGGGCTCATTAGG 60.108 55.000 0.00 0.00 0.00 2.69
4844 5069 0.108329 CGTTCGTGGGCTCATTAGGT 60.108 55.000 0.00 0.00 0.00 3.08
4845 5070 1.653151 GTTCGTGGGCTCATTAGGTC 58.347 55.000 0.00 0.00 0.00 3.85
4846 5071 1.066430 GTTCGTGGGCTCATTAGGTCA 60.066 52.381 0.00 0.00 0.00 4.02
4847 5072 0.535335 TCGTGGGCTCATTAGGTCAC 59.465 55.000 0.00 0.00 0.00 3.67
4848 5073 0.462047 CGTGGGCTCATTAGGTCACC 60.462 60.000 0.00 0.00 0.00 4.02
4849 5074 0.107165 GTGGGCTCATTAGGTCACCC 60.107 60.000 0.00 0.00 37.88 4.61
4850 5075 1.279025 TGGGCTCATTAGGTCACCCC 61.279 60.000 0.00 0.00 36.45 4.95
4851 5076 1.532238 GGCTCATTAGGTCACCCCC 59.468 63.158 0.00 0.00 0.00 5.40
4852 5077 1.146263 GCTCATTAGGTCACCCCCG 59.854 63.158 0.00 0.00 0.00 5.73
4853 5078 1.146263 CTCATTAGGTCACCCCCGC 59.854 63.158 0.00 0.00 0.00 6.13
4854 5079 2.203015 CATTAGGTCACCCCCGCG 60.203 66.667 0.00 0.00 0.00 6.46
4855 5080 3.476419 ATTAGGTCACCCCCGCGG 61.476 66.667 21.04 21.04 37.81 6.46
4869 5094 3.876300 GCGGTCAGCGAGTCATTT 58.124 55.556 0.00 0.00 35.41 2.32
4870 5095 1.421485 GCGGTCAGCGAGTCATTTG 59.579 57.895 0.00 0.00 35.41 2.32
4871 5096 1.291877 GCGGTCAGCGAGTCATTTGT 61.292 55.000 0.00 0.00 35.41 2.83
4872 5097 0.716108 CGGTCAGCGAGTCATTTGTC 59.284 55.000 0.00 0.00 0.00 3.18
4873 5098 1.079503 GGTCAGCGAGTCATTTGTCC 58.920 55.000 0.00 0.00 0.00 4.02
4874 5099 1.338200 GGTCAGCGAGTCATTTGTCCT 60.338 52.381 0.00 0.00 0.00 3.85
4875 5100 1.996191 GTCAGCGAGTCATTTGTCCTC 59.004 52.381 0.00 0.00 0.00 3.71
4876 5101 1.066858 TCAGCGAGTCATTTGTCCTCC 60.067 52.381 0.00 0.00 0.00 4.30
4877 5102 0.250513 AGCGAGTCATTTGTCCTCCC 59.749 55.000 0.00 0.00 0.00 4.30
4878 5103 0.250513 GCGAGTCATTTGTCCTCCCT 59.749 55.000 0.00 0.00 0.00 4.20
4879 5104 1.740718 GCGAGTCATTTGTCCTCCCTC 60.741 57.143 0.00 0.00 0.00 4.30
4880 5105 1.550524 CGAGTCATTTGTCCTCCCTCA 59.449 52.381 0.00 0.00 0.00 3.86
4881 5106 2.675317 CGAGTCATTTGTCCTCCCTCAC 60.675 54.545 0.00 0.00 0.00 3.51
4882 5107 2.303022 GAGTCATTTGTCCTCCCTCACA 59.697 50.000 0.00 0.00 0.00 3.58
4883 5108 2.711009 AGTCATTTGTCCTCCCTCACAA 59.289 45.455 0.00 0.00 0.00 3.33
4884 5109 2.814336 GTCATTTGTCCTCCCTCACAAC 59.186 50.000 0.00 0.00 32.19 3.32
4885 5110 2.162681 CATTTGTCCTCCCTCACAACC 58.837 52.381 0.00 0.00 32.19 3.77
4886 5111 1.217916 TTTGTCCTCCCTCACAACCA 58.782 50.000 0.00 0.00 32.19 3.67
4887 5112 0.472471 TTGTCCTCCCTCACAACCAC 59.528 55.000 0.00 0.00 0.00 4.16
4888 5113 1.375326 GTCCTCCCTCACAACCACC 59.625 63.158 0.00 0.00 0.00 4.61
4889 5114 1.128188 GTCCTCCCTCACAACCACCT 61.128 60.000 0.00 0.00 0.00 4.00
4890 5115 0.401395 TCCTCCCTCACAACCACCTT 60.401 55.000 0.00 0.00 0.00 3.50
4891 5116 1.132657 TCCTCCCTCACAACCACCTTA 60.133 52.381 0.00 0.00 0.00 2.69
4892 5117 1.916181 CCTCCCTCACAACCACCTTAT 59.084 52.381 0.00 0.00 0.00 1.73
4893 5118 3.112263 CCTCCCTCACAACCACCTTATA 58.888 50.000 0.00 0.00 0.00 0.98
4894 5119 3.716872 CCTCCCTCACAACCACCTTATAT 59.283 47.826 0.00 0.00 0.00 0.86
4895 5120 4.202367 CCTCCCTCACAACCACCTTATATC 60.202 50.000 0.00 0.00 0.00 1.63
4896 5121 3.714798 TCCCTCACAACCACCTTATATCC 59.285 47.826 0.00 0.00 0.00 2.59
4897 5122 3.181443 CCCTCACAACCACCTTATATCCC 60.181 52.174 0.00 0.00 0.00 3.85
4898 5123 3.458118 CCTCACAACCACCTTATATCCCA 59.542 47.826 0.00 0.00 0.00 4.37
4899 5124 4.080015 CCTCACAACCACCTTATATCCCAA 60.080 45.833 0.00 0.00 0.00 4.12
4900 5125 5.399038 CCTCACAACCACCTTATATCCCAAT 60.399 44.000 0.00 0.00 0.00 3.16
4901 5126 6.183361 CCTCACAACCACCTTATATCCCAATA 60.183 42.308 0.00 0.00 0.00 1.90
4902 5127 6.597562 TCACAACCACCTTATATCCCAATAC 58.402 40.000 0.00 0.00 0.00 1.89
4903 5128 5.768164 CACAACCACCTTATATCCCAATACC 59.232 44.000 0.00 0.00 0.00 2.73
4904 5129 5.163023 ACAACCACCTTATATCCCAATACCC 60.163 44.000 0.00 0.00 0.00 3.69
4905 5130 4.583309 ACCACCTTATATCCCAATACCCA 58.417 43.478 0.00 0.00 0.00 4.51
4906 5131 4.985583 ACCACCTTATATCCCAATACCCAA 59.014 41.667 0.00 0.00 0.00 4.12
4907 5132 5.437043 ACCACCTTATATCCCAATACCCAAA 59.563 40.000 0.00 0.00 0.00 3.28
4908 5133 6.105589 ACCACCTTATATCCCAATACCCAAAT 59.894 38.462 0.00 0.00 0.00 2.32
4909 5134 7.016296 CCACCTTATATCCCAATACCCAAATT 58.984 38.462 0.00 0.00 0.00 1.82
4910 5135 7.178451 CCACCTTATATCCCAATACCCAAATTC 59.822 40.741 0.00 0.00 0.00 2.17
4911 5136 7.728083 CACCTTATATCCCAATACCCAAATTCA 59.272 37.037 0.00 0.00 0.00 2.57
4912 5137 8.464322 ACCTTATATCCCAATACCCAAATTCAT 58.536 33.333 0.00 0.00 0.00 2.57
4913 5138 8.752187 CCTTATATCCCAATACCCAAATTCATG 58.248 37.037 0.00 0.00 0.00 3.07
4914 5139 4.961438 ATCCCAATACCCAAATTCATGC 57.039 40.909 0.00 0.00 0.00 4.06
4915 5140 3.717576 TCCCAATACCCAAATTCATGCA 58.282 40.909 0.00 0.00 0.00 3.96
4916 5141 4.099633 TCCCAATACCCAAATTCATGCAA 58.900 39.130 0.00 0.00 0.00 4.08
4917 5142 4.533707 TCCCAATACCCAAATTCATGCAAA 59.466 37.500 0.00 0.00 0.00 3.68
4918 5143 5.191323 TCCCAATACCCAAATTCATGCAAAT 59.809 36.000 0.00 0.00 0.00 2.32
4919 5144 5.887035 CCCAATACCCAAATTCATGCAAATT 59.113 36.000 0.00 0.00 0.00 1.82
4920 5145 6.038492 CCCAATACCCAAATTCATGCAAATTC 59.962 38.462 0.00 0.00 0.00 2.17
4921 5146 6.598457 CCAATACCCAAATTCATGCAAATTCA 59.402 34.615 0.00 0.00 0.00 2.57
4922 5147 7.283580 CCAATACCCAAATTCATGCAAATTCAT 59.716 33.333 0.00 0.00 0.00 2.57
4923 5148 9.327628 CAATACCCAAATTCATGCAAATTCATA 57.672 29.630 0.00 0.00 0.00 2.15
4924 5149 8.891671 ATACCCAAATTCATGCAAATTCATAC 57.108 30.769 0.00 0.00 0.00 2.39
4925 5150 6.709281 ACCCAAATTCATGCAAATTCATACA 58.291 32.000 0.00 0.00 0.00 2.29
4926 5151 6.594937 ACCCAAATTCATGCAAATTCATACAC 59.405 34.615 0.00 0.00 0.00 2.90
4927 5152 6.237888 CCCAAATTCATGCAAATTCATACACG 60.238 38.462 0.00 0.00 0.00 4.49
4928 5153 6.310956 CCAAATTCATGCAAATTCATACACGT 59.689 34.615 0.00 0.00 0.00 4.49
4929 5154 7.385650 CAAATTCATGCAAATTCATACACGTC 58.614 34.615 0.00 0.00 0.00 4.34
4930 5155 4.614555 TCATGCAAATTCATACACGTCC 57.385 40.909 0.00 0.00 0.00 4.79
4931 5156 4.006319 TCATGCAAATTCATACACGTCCA 58.994 39.130 0.00 0.00 0.00 4.02
4932 5157 4.639755 TCATGCAAATTCATACACGTCCAT 59.360 37.500 0.00 0.00 0.00 3.41
4933 5158 4.614555 TGCAAATTCATACACGTCCATC 57.385 40.909 0.00 0.00 0.00 3.51
4934 5159 4.006319 TGCAAATTCATACACGTCCATCA 58.994 39.130 0.00 0.00 0.00 3.07
4935 5160 4.142708 TGCAAATTCATACACGTCCATCAC 60.143 41.667 0.00 0.00 0.00 3.06
4936 5161 4.142708 GCAAATTCATACACGTCCATCACA 60.143 41.667 0.00 0.00 0.00 3.58
4937 5162 5.449041 GCAAATTCATACACGTCCATCACAT 60.449 40.000 0.00 0.00 0.00 3.21
4938 5163 6.238347 GCAAATTCATACACGTCCATCACATA 60.238 38.462 0.00 0.00 0.00 2.29
4939 5164 7.678454 GCAAATTCATACACGTCCATCACATAA 60.678 37.037 0.00 0.00 0.00 1.90
4940 5165 6.844696 ATTCATACACGTCCATCACATAAC 57.155 37.500 0.00 0.00 0.00 1.89
4941 5166 4.356289 TCATACACGTCCATCACATAACG 58.644 43.478 0.00 0.00 40.77 3.18
4943 5168 3.853831 ACACGTCCATCACATAACGTA 57.146 42.857 0.00 0.00 45.67 3.57
4944 5169 4.177165 ACACGTCCATCACATAACGTAA 57.823 40.909 0.00 0.00 45.67 3.18
4945 5170 4.558178 ACACGTCCATCACATAACGTAAA 58.442 39.130 0.00 0.00 45.67 2.01
4946 5171 5.172934 ACACGTCCATCACATAACGTAAAT 58.827 37.500 0.00 0.00 45.67 1.40
4947 5172 5.640357 ACACGTCCATCACATAACGTAAATT 59.360 36.000 0.00 0.00 45.67 1.82
4948 5173 6.182634 CACGTCCATCACATAACGTAAATTC 58.817 40.000 0.00 0.00 45.67 2.17
4949 5174 5.870433 ACGTCCATCACATAACGTAAATTCA 59.130 36.000 0.00 0.00 45.59 2.57
4950 5175 6.537301 ACGTCCATCACATAACGTAAATTCAT 59.463 34.615 0.00 0.00 45.59 2.57
4951 5176 7.063456 CGTCCATCACATAACGTAAATTCATC 58.937 38.462 0.00 0.00 0.00 2.92
4952 5177 7.254286 CGTCCATCACATAACGTAAATTCATCA 60.254 37.037 0.00 0.00 0.00 3.07
4953 5178 8.559536 GTCCATCACATAACGTAAATTCATCAT 58.440 33.333 0.00 0.00 0.00 2.45
4954 5179 9.771534 TCCATCACATAACGTAAATTCATCATA 57.228 29.630 0.00 0.00 0.00 2.15
4969 5194 8.428186 AATTCATCATAAATTCAACACATGCC 57.572 30.769 0.00 0.00 0.00 4.40
4970 5195 6.527057 TCATCATAAATTCAACACATGCCA 57.473 33.333 0.00 0.00 0.00 4.92
4971 5196 6.932947 TCATCATAAATTCAACACATGCCAA 58.067 32.000 0.00 0.00 0.00 4.52
4972 5197 7.384477 TCATCATAAATTCAACACATGCCAAA 58.616 30.769 0.00 0.00 0.00 3.28
4973 5198 7.876582 TCATCATAAATTCAACACATGCCAAAA 59.123 29.630 0.00 0.00 0.00 2.44
4974 5199 8.670135 CATCATAAATTCAACACATGCCAAAAT 58.330 29.630 0.00 0.00 0.00 1.82
4975 5200 9.887629 ATCATAAATTCAACACATGCCAAAATA 57.112 25.926 0.00 0.00 0.00 1.40
4976 5201 9.716531 TCATAAATTCAACACATGCCAAAATAA 57.283 25.926 0.00 0.00 0.00 1.40
4980 5205 8.618702 AATTCAACACATGCCAAAATAATTCA 57.381 26.923 0.00 0.00 0.00 2.57
4981 5206 8.618702 ATTCAACACATGCCAAAATAATTCAA 57.381 26.923 0.00 0.00 0.00 2.69
4982 5207 7.418840 TCAACACATGCCAAAATAATTCAAC 57.581 32.000 0.00 0.00 0.00 3.18
4983 5208 6.988580 TCAACACATGCCAAAATAATTCAACA 59.011 30.769 0.00 0.00 0.00 3.33
4984 5209 7.660617 TCAACACATGCCAAAATAATTCAACAT 59.339 29.630 0.00 0.00 0.00 2.71
4985 5210 7.982761 ACACATGCCAAAATAATTCAACATT 57.017 28.000 0.00 0.00 0.00 2.71
4986 5211 8.393671 ACACATGCCAAAATAATTCAACATTT 57.606 26.923 0.00 0.00 0.00 2.32
4987 5212 8.848182 ACACATGCCAAAATAATTCAACATTTT 58.152 25.926 0.00 0.00 35.30 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 1.152483 AGGGGAAGCAAGCAAGCAA 60.152 52.632 3.19 0.00 36.85 3.91
51 52 1.604593 GAGGGGAAGCAAGCAAGCA 60.605 57.895 3.19 0.00 36.85 3.91
52 53 2.694760 CGAGGGGAAGCAAGCAAGC 61.695 63.158 0.00 0.00 0.00 4.01
53 54 2.042831 CCGAGGGGAAGCAAGCAAG 61.043 63.158 0.00 0.00 34.06 4.01
91 92 2.677875 GGCCACAAAGCAGGGGAG 60.678 66.667 0.00 0.00 0.00 4.30
92 93 3.185203 AGGCCACAAAGCAGGGGA 61.185 61.111 5.01 0.00 0.00 4.81
94 95 2.677875 GGAGGCCACAAAGCAGGG 60.678 66.667 5.01 0.00 0.00 4.45
95 96 3.058160 CGGAGGCCACAAAGCAGG 61.058 66.667 5.01 0.00 0.00 4.85
192 199 0.455410 GCAACAGCTCACCAACACAA 59.545 50.000 0.00 0.00 0.00 3.33
230 237 1.524848 TAAAATCGCAAAGCACCGGA 58.475 45.000 9.46 0.00 0.00 5.14
254 264 3.195825 GCACAGGCTCTTCCTCTTACTTA 59.804 47.826 0.00 0.00 45.52 2.24
255 265 2.027653 GCACAGGCTCTTCCTCTTACTT 60.028 50.000 0.00 0.00 45.52 2.24
256 266 1.552792 GCACAGGCTCTTCCTCTTACT 59.447 52.381 0.00 0.00 45.52 2.24
257 267 1.737363 CGCACAGGCTCTTCCTCTTAC 60.737 57.143 0.00 0.00 45.52 2.34
258 268 0.532573 CGCACAGGCTCTTCCTCTTA 59.467 55.000 0.00 0.00 45.52 2.10
259 269 1.294780 CGCACAGGCTCTTCCTCTT 59.705 57.895 0.00 0.00 45.52 2.85
270 280 1.746615 ACAAGCATAGCCGCACAGG 60.747 57.895 0.00 0.00 44.97 4.00
271 281 1.300971 ACACAAGCATAGCCGCACAG 61.301 55.000 0.00 0.00 0.00 3.66
272 282 0.888736 AACACAAGCATAGCCGCACA 60.889 50.000 0.00 0.00 0.00 4.57
274 300 0.958091 AAAACACAAGCATAGCCGCA 59.042 45.000 0.00 0.00 0.00 5.69
276 302 2.228822 AGGAAAAACACAAGCATAGCCG 59.771 45.455 0.00 0.00 0.00 5.52
280 306 4.662468 TGCAAGGAAAAACACAAGCATA 57.338 36.364 0.00 0.00 0.00 3.14
281 307 3.540314 TGCAAGGAAAAACACAAGCAT 57.460 38.095 0.00 0.00 0.00 3.79
285 311 3.740764 GCCAGATGCAAGGAAAAACACAA 60.741 43.478 7.33 0.00 40.77 3.33
293 319 1.133699 CCATAGGCCAGATGCAAGGAA 60.134 52.381 5.01 0.00 43.89 3.36
297 323 1.202639 CGTACCATAGGCCAGATGCAA 60.203 52.381 5.01 0.00 43.89 4.08
299 325 0.393077 ACGTACCATAGGCCAGATGC 59.607 55.000 5.01 0.00 40.16 3.91
300 326 2.891580 ACTACGTACCATAGGCCAGATG 59.108 50.000 5.01 8.21 0.00 2.90
301 327 3.240310 ACTACGTACCATAGGCCAGAT 57.760 47.619 5.01 0.00 0.00 2.90
302 328 2.742428 ACTACGTACCATAGGCCAGA 57.258 50.000 5.01 0.00 0.00 3.86
303 329 4.082354 GGATTACTACGTACCATAGGCCAG 60.082 50.000 5.01 0.00 0.00 4.85
304 330 3.828451 GGATTACTACGTACCATAGGCCA 59.172 47.826 5.01 0.00 0.00 5.36
305 331 3.194329 GGGATTACTACGTACCATAGGCC 59.806 52.174 0.00 0.00 0.00 5.19
307 333 5.415077 CAGAGGGATTACTACGTACCATAGG 59.585 48.000 0.00 0.00 0.00 2.57
310 336 4.801164 ACAGAGGGATTACTACGTACCAT 58.199 43.478 0.00 0.00 0.00 3.55
311 337 4.240881 ACAGAGGGATTACTACGTACCA 57.759 45.455 0.00 0.00 0.00 3.25
312 338 6.319911 AGTTTACAGAGGGATTACTACGTACC 59.680 42.308 0.00 0.00 0.00 3.34
314 340 9.632638 ATTAGTTTACAGAGGGATTACTACGTA 57.367 33.333 0.00 0.00 0.00 3.57
323 349 8.524487 CGCTCTTATATTAGTTTACAGAGGGAT 58.476 37.037 4.76 0.00 40.49 3.85
325 351 7.659186 ACGCTCTTATATTAGTTTACAGAGGG 58.341 38.462 8.36 8.36 42.53 4.30
326 352 9.530633 AAACGCTCTTATATTAGTTTACAGAGG 57.469 33.333 0.00 0.00 31.14 3.69
371 397 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
372 398 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
373 399 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
374 400 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
375 401 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
376 402 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
377 403 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
378 404 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
379 405 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
380 406 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
381 407 8.233190 CGTACTCCCTCCGTAAACTAATATAAG 58.767 40.741 0.00 0.00 0.00 1.73
382 408 7.719633 ACGTACTCCCTCCGTAAACTAATATAA 59.280 37.037 0.00 0.00 32.22 0.98
383 409 7.224297 ACGTACTCCCTCCGTAAACTAATATA 58.776 38.462 0.00 0.00 32.22 0.86
384 410 6.064717 ACGTACTCCCTCCGTAAACTAATAT 58.935 40.000 0.00 0.00 32.22 1.28
385 411 5.437060 ACGTACTCCCTCCGTAAACTAATA 58.563 41.667 0.00 0.00 32.22 0.98
386 412 4.273318 ACGTACTCCCTCCGTAAACTAAT 58.727 43.478 0.00 0.00 32.22 1.73
387 413 3.686016 ACGTACTCCCTCCGTAAACTAA 58.314 45.455 0.00 0.00 32.22 2.24
388 414 3.350219 ACGTACTCCCTCCGTAAACTA 57.650 47.619 0.00 0.00 32.22 2.24
389 415 2.206576 ACGTACTCCCTCCGTAAACT 57.793 50.000 0.00 0.00 32.22 2.66
390 416 3.010420 ACTACGTACTCCCTCCGTAAAC 58.990 50.000 0.00 0.00 36.72 2.01
391 417 3.350219 ACTACGTACTCCCTCCGTAAA 57.650 47.619 0.00 0.00 36.72 2.01
392 418 3.350219 AACTACGTACTCCCTCCGTAA 57.650 47.619 0.00 0.00 36.72 3.18
393 419 3.055094 AGAAACTACGTACTCCCTCCGTA 60.055 47.826 0.00 0.00 36.12 4.02
394 420 2.087646 GAAACTACGTACTCCCTCCGT 58.912 52.381 0.00 0.00 38.53 4.69
395 421 2.363683 AGAAACTACGTACTCCCTCCG 58.636 52.381 0.00 0.00 0.00 4.63
396 422 3.760684 TCAAGAAACTACGTACTCCCTCC 59.239 47.826 0.00 0.00 0.00 4.30
397 423 5.341617 CATCAAGAAACTACGTACTCCCTC 58.658 45.833 0.00 0.00 0.00 4.30
398 424 4.159879 CCATCAAGAAACTACGTACTCCCT 59.840 45.833 0.00 0.00 0.00 4.20
399 425 4.159135 TCCATCAAGAAACTACGTACTCCC 59.841 45.833 0.00 0.00 0.00 4.30
400 426 5.320549 TCCATCAAGAAACTACGTACTCC 57.679 43.478 0.00 0.00 0.00 3.85
401 427 7.434602 GGTTATCCATCAAGAAACTACGTACTC 59.565 40.741 0.00 0.00 0.00 2.59
402 428 7.093640 TGGTTATCCATCAAGAAACTACGTACT 60.094 37.037 0.00 0.00 39.03 2.73
403 429 7.037438 TGGTTATCCATCAAGAAACTACGTAC 58.963 38.462 0.00 0.00 39.03 3.67
404 430 7.093640 ACTGGTTATCCATCAAGAAACTACGTA 60.094 37.037 0.00 0.00 43.43 3.57
405 431 6.045072 TGGTTATCCATCAAGAAACTACGT 57.955 37.500 0.00 0.00 39.03 3.57
473 514 0.385390 GGCCTTGGACAACACAACTG 59.615 55.000 0.00 0.00 0.00 3.16
496 541 9.699410 ATGATAATAATCCAAGGAAACAAGTGA 57.301 29.630 0.00 0.00 0.00 3.41
505 550 8.597167 CACTCCTACATGATAATAATCCAAGGA 58.403 37.037 0.00 0.00 0.00 3.36
506 551 7.826252 CCACTCCTACATGATAATAATCCAAGG 59.174 40.741 0.00 0.00 0.00 3.61
507 552 7.826252 CCCACTCCTACATGATAATAATCCAAG 59.174 40.741 0.00 0.00 0.00 3.61
509 554 6.215431 CCCCACTCCTACATGATAATAATCCA 59.785 42.308 0.00 0.00 0.00 3.41
511 556 6.653989 CCCCCACTCCTACATGATAATAATC 58.346 44.000 0.00 0.00 0.00 1.75
512 557 5.044846 GCCCCCACTCCTACATGATAATAAT 60.045 44.000 0.00 0.00 0.00 1.28
513 558 4.288626 GCCCCCACTCCTACATGATAATAA 59.711 45.833 0.00 0.00 0.00 1.40
514 559 3.844211 GCCCCCACTCCTACATGATAATA 59.156 47.826 0.00 0.00 0.00 0.98
525 570 0.786435 AAAGAAATGCCCCCACTCCT 59.214 50.000 0.00 0.00 0.00 3.69
535 617 3.572584 CAACAGAGGAGCAAAGAAATGC 58.427 45.455 0.00 0.00 46.78 3.56
536 618 3.613432 GCCAACAGAGGAGCAAAGAAATG 60.613 47.826 0.00 0.00 0.00 2.32
537 619 2.560105 GCCAACAGAGGAGCAAAGAAAT 59.440 45.455 0.00 0.00 0.00 2.17
538 620 1.956477 GCCAACAGAGGAGCAAAGAAA 59.044 47.619 0.00 0.00 0.00 2.52
540 622 0.767375 AGCCAACAGAGGAGCAAAGA 59.233 50.000 0.00 0.00 0.00 2.52
541 623 0.879765 CAGCCAACAGAGGAGCAAAG 59.120 55.000 0.00 0.00 0.00 2.77
542 624 1.174712 GCAGCCAACAGAGGAGCAAA 61.175 55.000 0.00 0.00 33.22 3.68
544 626 2.033141 GCAGCCAACAGAGGAGCA 59.967 61.111 0.00 0.00 33.22 4.26
545 627 2.033141 TGCAGCCAACAGAGGAGC 59.967 61.111 0.00 0.00 33.49 4.70
554 638 1.842920 TGAGAGGTCCTGCAGCCAA 60.843 57.895 8.66 0.00 0.00 4.52
565 649 0.846693 AAGTGGGCAAAGTGAGAGGT 59.153 50.000 0.00 0.00 0.00 3.85
659 768 9.422196 GTTCAATTATTACATGAAACTAGCGAC 57.578 33.333 0.00 0.00 35.07 5.19
703 812 9.631452 TCGCACATTTTTATTTATCACATTTGA 57.369 25.926 0.00 0.00 35.73 2.69
711 829 7.850492 GCCCAAAATCGCACATTTTTATTTATC 59.150 33.333 1.44 0.00 0.00 1.75
745 863 6.939730 TGATTGCTGACCAACTTTATCAGTTA 59.060 34.615 2.72 0.00 44.60 2.24
770 888 6.049149 CCGATATGTCAAGTAATTGTCCAGT 58.951 40.000 2.43 0.00 0.00 4.00
805 923 6.200854 GGAAATGAACTGAACGCAAAAGAAAT 59.799 34.615 0.00 0.00 0.00 2.17
987 1110 5.163814 GGATCTTGGCATATCGCACTAAATC 60.164 44.000 0.00 0.00 45.17 2.17
1185 1308 1.225373 CCAATCCCATTCCCTCCAGA 58.775 55.000 0.00 0.00 0.00 3.86
1227 1350 1.409241 GCCTGGCATTGAGGAAGATCA 60.409 52.381 15.17 0.00 31.48 2.92
1270 1393 1.311859 CTTTCCTGCAAGTCAGCACA 58.688 50.000 0.00 0.00 41.50 4.57
1398 1521 0.314935 CATGCCCGCCATTATGAACC 59.685 55.000 0.00 0.00 29.71 3.62
1899 2022 4.716784 TCTACATGCTCATGAGGGTAGTTT 59.283 41.667 23.89 0.00 41.20 2.66
1903 2026 4.184649 TCTCTACATGCTCATGAGGGTA 57.815 45.455 23.89 0.00 41.20 3.69
2017 2140 8.175702 ACCTGTATGGCCATGTAATTCATGTAG 61.176 40.741 29.04 8.83 44.20 2.74
2144 2267 8.862325 TTAACAGACAATCATGGTATTTCAGT 57.138 30.769 0.00 0.00 0.00 3.41
2422 2546 8.621286 ACAAAACCAGTAGAACAATGTAAGAAG 58.379 33.333 0.00 0.00 0.00 2.85
2459 2583 7.876936 TGGAGTATACGATAAGACTCTTTGT 57.123 36.000 0.00 0.00 38.68 2.83
2690 2814 3.758554 CCTTTCCATCTGGTTGGTAACTG 59.241 47.826 0.00 0.00 38.01 3.16
3108 3233 4.034048 GGGAATCACTTGTACATAACTGCG 59.966 45.833 0.00 0.00 0.00 5.18
3148 3273 5.174395 ACTCGAATCTTGGAATCTGTTGAG 58.826 41.667 0.00 0.00 0.00 3.02
3190 3315 3.697542 ACGTGCCTTTAAACTTTTGGACT 59.302 39.130 0.00 0.00 0.00 3.85
3259 3384 6.861055 GTCATGGAACGTAAACATGTGAAAAT 59.139 34.615 19.79 0.00 41.91 1.82
3278 3403 3.452264 TGTTAGGATCACTGAGGTCATGG 59.548 47.826 0.00 0.00 0.00 3.66
3284 3409 3.181461 GGATGGTGTTAGGATCACTGAGG 60.181 52.174 0.00 0.00 36.25 3.86
3354 3479 3.117491 CCATCTGATGTTAGCGATGGT 57.883 47.619 15.95 0.00 44.91 3.55
3360 3485 5.732633 AGATATCTGCCATCTGATGTTAGC 58.267 41.667 15.95 12.47 33.66 3.09
3473 3598 4.701651 TGGAGAAGAACATTTCGCATGATT 59.298 37.500 0.00 0.00 34.02 2.57
3578 3703 2.807895 GTAAAGCCGACGCGCTGA 60.808 61.111 5.73 1.56 39.64 4.26
3604 3729 2.428085 GGGAACGGCTCTCTCCTCC 61.428 68.421 0.00 0.00 0.00 4.30
3605 3730 2.428085 GGGGAACGGCTCTCTCCTC 61.428 68.421 0.00 0.00 0.00 3.71
3606 3731 2.364448 GGGGAACGGCTCTCTCCT 60.364 66.667 0.00 0.00 0.00 3.69
3642 3770 1.295292 ACAGACCCCCTCATACCATCT 59.705 52.381 0.00 0.00 0.00 2.90
3645 3773 0.415830 TCACAGACCCCCTCATACCA 59.584 55.000 0.00 0.00 0.00 3.25
3696 3824 4.047125 CGGGGGCCATTCACAGGT 62.047 66.667 4.39 0.00 0.00 4.00
3789 3917 0.316204 CGTAGTTGTGGAAGGACCGT 59.684 55.000 0.00 0.00 42.61 4.83
3845 3973 5.038033 GGTCGTCAGTAGAAGAAGCTAATG 58.962 45.833 0.00 0.00 37.69 1.90
3894 4025 0.182537 CCACACTCCCAACACTTCCA 59.817 55.000 0.00 0.00 0.00 3.53
3941 4073 5.065988 CCGTGGTACAATATTCCCTCTTTTG 59.934 44.000 0.00 0.00 44.16 2.44
3982 4114 6.204495 GCATCTCCACTGATTAATCTCCTTTC 59.796 42.308 16.24 0.00 0.00 2.62
4085 4218 9.080097 AGGGTTACATATGCTAGAACTAACTAG 57.920 37.037 1.58 0.00 41.70 2.57
4086 4219 8.857098 CAGGGTTACATATGCTAGAACTAACTA 58.143 37.037 1.58 0.00 0.00 2.24
4087 4220 7.344871 ACAGGGTTACATATGCTAGAACTAACT 59.655 37.037 1.58 1.31 0.00 2.24
4088 4221 7.498443 ACAGGGTTACATATGCTAGAACTAAC 58.502 38.462 1.58 2.43 0.00 2.34
4090 4223 7.343574 TCAACAGGGTTACATATGCTAGAACTA 59.656 37.037 1.58 0.00 0.00 2.24
4091 4224 6.156256 TCAACAGGGTTACATATGCTAGAACT 59.844 38.462 1.58 0.00 0.00 3.01
4092 4225 6.346096 TCAACAGGGTTACATATGCTAGAAC 58.654 40.000 1.58 2.56 0.00 3.01
4094 4227 6.553953 TTCAACAGGGTTACATATGCTAGA 57.446 37.500 1.58 0.00 0.00 2.43
4209 4395 1.347707 TGACTGACATGAACTGGACCC 59.652 52.381 0.00 0.00 0.00 4.46
4210 4396 2.839486 TGACTGACATGAACTGGACC 57.161 50.000 0.00 0.00 0.00 4.46
4261 4447 4.025040 TGATCATGACTGGAAGCAACTT 57.975 40.909 0.00 0.00 37.60 2.66
4342 4536 1.340889 GTTGGCAAGCTGGAACATTCA 59.659 47.619 0.00 0.00 38.20 2.57
4353 4547 0.746659 AACTCACCAAGTTGGCAAGC 59.253 50.000 22.25 0.00 46.61 4.01
4499 4702 4.382457 GTGTTGTACGAGCAAACACGTATA 59.618 41.667 9.56 0.00 44.99 1.47
4504 4707 2.286184 CCTGTGTTGTACGAGCAAACAC 60.286 50.000 15.59 15.59 34.33 3.32
4527 4747 0.946221 CGTCACTCACTCTGTTGGCC 60.946 60.000 0.00 0.00 0.00 5.36
4536 4756 1.810606 CTGCAGACCCGTCACTCACT 61.811 60.000 8.42 0.00 0.00 3.41
4537 4757 1.373497 CTGCAGACCCGTCACTCAC 60.373 63.158 8.42 0.00 0.00 3.51
4556 4776 2.618045 GGCCCACAAACAGCTACACTAT 60.618 50.000 0.00 0.00 0.00 2.12
4557 4777 1.271163 GGCCCACAAACAGCTACACTA 60.271 52.381 0.00 0.00 0.00 2.74
4564 4784 2.730094 CACAGGCCCACAAACAGC 59.270 61.111 0.00 0.00 0.00 4.40
4565 4785 1.829533 AGCACAGGCCCACAAACAG 60.830 57.895 0.00 0.00 42.56 3.16
4599 4824 2.544267 GCGAGGTAGCACCATGATTAAC 59.456 50.000 0.00 0.00 41.95 2.01
4604 4829 1.257750 ACAGCGAGGTAGCACCATGA 61.258 55.000 0.00 0.00 41.95 3.07
4616 4841 0.868406 GGTCTCAACCAAACAGCGAG 59.132 55.000 0.00 0.00 45.68 5.03
4617 4842 3.000815 GGTCTCAACCAAACAGCGA 57.999 52.632 0.00 0.00 45.68 4.93
4626 4851 0.765510 ACTGTTCCCAGGTCTCAACC 59.234 55.000 0.00 0.00 46.87 3.77
4627 4852 3.323979 TCTTACTGTTCCCAGGTCTCAAC 59.676 47.826 0.00 0.00 43.36 3.18
4628 4853 3.323979 GTCTTACTGTTCCCAGGTCTCAA 59.676 47.826 0.00 0.00 43.36 3.02
4629 4854 2.897969 GTCTTACTGTTCCCAGGTCTCA 59.102 50.000 0.00 0.00 43.36 3.27
4630 4855 2.897969 TGTCTTACTGTTCCCAGGTCTC 59.102 50.000 0.00 0.00 43.36 3.36
4631 4856 2.972348 TGTCTTACTGTTCCCAGGTCT 58.028 47.619 0.00 0.00 43.36 3.85
4632 4857 3.071167 ACTTGTCTTACTGTTCCCAGGTC 59.929 47.826 0.00 0.00 43.36 3.85
4633 4858 3.046374 ACTTGTCTTACTGTTCCCAGGT 58.954 45.455 0.00 0.00 43.36 4.00
4634 4859 3.403038 CACTTGTCTTACTGTTCCCAGG 58.597 50.000 0.00 0.00 43.36 4.45
4635 4860 2.808543 GCACTTGTCTTACTGTTCCCAG 59.191 50.000 0.00 0.00 44.68 4.45
4636 4861 2.171659 TGCACTTGTCTTACTGTTCCCA 59.828 45.455 0.00 0.00 0.00 4.37
4637 4862 2.548480 GTGCACTTGTCTTACTGTTCCC 59.452 50.000 10.32 0.00 0.00 3.97
4638 4863 3.467803 AGTGCACTTGTCTTACTGTTCC 58.532 45.455 15.25 0.00 0.00 3.62
4639 4864 4.686554 CCTAGTGCACTTGTCTTACTGTTC 59.313 45.833 27.06 0.00 0.00 3.18
4640 4865 4.344102 TCCTAGTGCACTTGTCTTACTGTT 59.656 41.667 27.06 0.00 0.00 3.16
4641 4866 3.895656 TCCTAGTGCACTTGTCTTACTGT 59.104 43.478 27.06 0.00 0.00 3.55
4642 4867 4.489810 CTCCTAGTGCACTTGTCTTACTG 58.510 47.826 27.06 8.32 0.00 2.74
4643 4868 3.056465 GCTCCTAGTGCACTTGTCTTACT 60.056 47.826 27.06 0.00 0.00 2.24
4644 4869 3.254892 GCTCCTAGTGCACTTGTCTTAC 58.745 50.000 27.06 5.48 0.00 2.34
4645 4870 2.897326 TGCTCCTAGTGCACTTGTCTTA 59.103 45.455 27.06 4.38 35.31 2.10
4646 4871 1.694150 TGCTCCTAGTGCACTTGTCTT 59.306 47.619 27.06 1.19 35.31 3.01
4647 4872 1.274728 CTGCTCCTAGTGCACTTGTCT 59.725 52.381 27.06 2.06 36.37 3.41
4648 4873 1.719600 CTGCTCCTAGTGCACTTGTC 58.280 55.000 27.06 13.94 36.37 3.18
4649 4874 0.321122 GCTGCTCCTAGTGCACTTGT 60.321 55.000 27.06 2.95 36.37 3.16
4650 4875 1.023513 GGCTGCTCCTAGTGCACTTG 61.024 60.000 27.06 22.97 36.37 3.16
4651 4876 1.298014 GGCTGCTCCTAGTGCACTT 59.702 57.895 27.06 9.41 36.37 3.16
4652 4877 2.664081 GGGCTGCTCCTAGTGCACT 61.664 63.158 25.12 25.12 36.37 4.40
4653 4878 2.124942 GGGCTGCTCCTAGTGCAC 60.125 66.667 9.40 9.40 36.37 4.57
4654 4879 2.607442 TGGGCTGCTCCTAGTGCA 60.607 61.111 0.00 7.33 38.81 4.57
4655 4880 2.124942 GTGGGCTGCTCCTAGTGC 60.125 66.667 0.00 0.00 34.39 4.40
4656 4881 1.965754 GAGGTGGGCTGCTCCTAGTG 61.966 65.000 0.00 0.00 34.39 2.74
4657 4882 1.687493 GAGGTGGGCTGCTCCTAGT 60.687 63.158 0.00 0.00 34.39 2.57
4658 4883 2.790791 CGAGGTGGGCTGCTCCTAG 61.791 68.421 0.00 1.31 34.39 3.02
4659 4884 2.759973 CGAGGTGGGCTGCTCCTA 60.760 66.667 0.00 0.00 34.39 2.94
4661 4886 4.767255 CACGAGGTGGGCTGCTCC 62.767 72.222 0.00 0.00 0.00 4.70
4670 4895 3.310774 CAGCATTAAATCTCCACGAGGTG 59.689 47.826 0.00 0.00 35.89 4.00
4671 4896 3.535561 CAGCATTAAATCTCCACGAGGT 58.464 45.455 0.00 0.00 35.89 3.85
4672 4897 2.289002 GCAGCATTAAATCTCCACGAGG 59.711 50.000 0.00 0.00 0.00 4.63
4673 4898 2.938451 TGCAGCATTAAATCTCCACGAG 59.062 45.455 0.00 0.00 0.00 4.18
4674 4899 2.938451 CTGCAGCATTAAATCTCCACGA 59.062 45.455 0.00 0.00 0.00 4.35
4675 4900 2.540361 GCTGCAGCATTAAATCTCCACG 60.540 50.000 33.36 0.00 41.59 4.94
4676 4901 3.075866 GCTGCAGCATTAAATCTCCAC 57.924 47.619 33.36 0.00 41.59 4.02
4689 4914 0.386478 GCACAAGTAGTTGCTGCAGC 60.386 55.000 31.89 31.89 39.00 5.25
4690 4915 0.110509 CGCACAAGTAGTTGCTGCAG 60.111 55.000 24.57 10.11 39.06 4.41
4691 4916 1.941072 CGCACAAGTAGTTGCTGCA 59.059 52.632 24.57 0.00 39.06 4.41
4692 4917 1.441016 GCGCACAAGTAGTTGCTGC 60.441 57.895 19.49 19.49 37.14 5.25
4693 4918 0.110509 CAGCGCACAAGTAGTTGCTG 60.111 55.000 11.47 7.93 45.28 4.41
4694 4919 1.845809 GCAGCGCACAAGTAGTTGCT 61.846 55.000 11.47 0.00 39.31 3.91
4695 4920 1.441016 GCAGCGCACAAGTAGTTGC 60.441 57.895 11.47 2.91 37.14 4.17
4696 4921 0.307453 TTGCAGCGCACAAGTAGTTG 59.693 50.000 11.47 8.81 38.71 3.16
4697 4922 0.307760 GTTGCAGCGCACAAGTAGTT 59.692 50.000 11.47 0.00 38.71 2.24
4698 4923 1.831389 CGTTGCAGCGCACAAGTAGT 61.831 55.000 10.76 0.00 38.71 2.73
4699 4924 1.154599 CGTTGCAGCGCACAAGTAG 60.155 57.895 10.76 4.66 38.71 2.57
4700 4925 2.603247 CCGTTGCAGCGCACAAGTA 61.603 57.895 18.28 0.00 38.71 2.24
4701 4926 3.952675 CCGTTGCAGCGCACAAGT 61.953 61.111 18.28 0.00 38.71 3.16
4702 4927 4.688419 CCCGTTGCAGCGCACAAG 62.688 66.667 18.28 3.22 38.71 3.16
4708 4933 3.314388 GAAGAAGCCCGTTGCAGCG 62.314 63.158 16.72 16.72 44.83 5.18
4709 4934 2.563427 GAAGAAGCCCGTTGCAGC 59.437 61.111 0.00 0.00 44.83 5.25
4710 4935 0.962356 ATGGAAGAAGCCCGTTGCAG 60.962 55.000 0.00 0.00 44.83 4.41
4711 4936 0.960364 GATGGAAGAAGCCCGTTGCA 60.960 55.000 0.00 0.00 44.83 4.08
4712 4937 0.678048 AGATGGAAGAAGCCCGTTGC 60.678 55.000 0.00 0.00 41.71 4.17
4713 4938 1.826385 AAGATGGAAGAAGCCCGTTG 58.174 50.000 0.00 0.00 0.00 4.10
4714 4939 2.838202 TCTAAGATGGAAGAAGCCCGTT 59.162 45.455 0.00 0.00 0.00 4.44
4715 4940 2.467880 TCTAAGATGGAAGAAGCCCGT 58.532 47.619 0.00 0.00 0.00 5.28
4716 4941 3.070159 TGATCTAAGATGGAAGAAGCCCG 59.930 47.826 0.00 0.00 0.00 6.13
4717 4942 4.696479 TGATCTAAGATGGAAGAAGCCC 57.304 45.455 0.00 0.00 0.00 5.19
4718 4943 5.700373 GTGATGATCTAAGATGGAAGAAGCC 59.300 44.000 0.00 0.00 0.00 4.35
4719 4944 5.700373 GGTGATGATCTAAGATGGAAGAAGC 59.300 44.000 0.00 0.00 0.00 3.86
4720 4945 6.824553 TGGTGATGATCTAAGATGGAAGAAG 58.175 40.000 0.00 0.00 0.00 2.85
4721 4946 6.813293 TGGTGATGATCTAAGATGGAAGAA 57.187 37.500 0.00 0.00 0.00 2.52
4722 4947 6.013898 GGATGGTGATGATCTAAGATGGAAGA 60.014 42.308 0.00 0.00 0.00 2.87
4723 4948 6.013553 AGGATGGTGATGATCTAAGATGGAAG 60.014 42.308 0.00 0.00 0.00 3.46
4724 4949 5.848369 AGGATGGTGATGATCTAAGATGGAA 59.152 40.000 0.00 0.00 0.00 3.53
4725 4950 5.409712 AGGATGGTGATGATCTAAGATGGA 58.590 41.667 0.00 0.00 0.00 3.41
4726 4951 5.758790 AGGATGGTGATGATCTAAGATGG 57.241 43.478 0.00 0.00 0.00 3.51
4727 4952 9.736414 AAAATAGGATGGTGATGATCTAAGATG 57.264 33.333 0.00 0.00 0.00 2.90
4732 4957 8.097038 GCTGTAAAATAGGATGGTGATGATCTA 58.903 37.037 0.00 0.00 0.00 1.98
4733 4958 6.939163 GCTGTAAAATAGGATGGTGATGATCT 59.061 38.462 0.00 0.00 0.00 2.75
4734 4959 6.939163 AGCTGTAAAATAGGATGGTGATGATC 59.061 38.462 0.00 0.00 0.00 2.92
4735 4960 6.845908 AGCTGTAAAATAGGATGGTGATGAT 58.154 36.000 0.00 0.00 0.00 2.45
4736 4961 6.252599 AGCTGTAAAATAGGATGGTGATGA 57.747 37.500 0.00 0.00 0.00 2.92
4737 4962 5.471456 GGAGCTGTAAAATAGGATGGTGATG 59.529 44.000 0.00 0.00 0.00 3.07
4738 4963 5.625150 GGAGCTGTAAAATAGGATGGTGAT 58.375 41.667 0.00 0.00 0.00 3.06
4739 4964 4.442893 CGGAGCTGTAAAATAGGATGGTGA 60.443 45.833 0.00 0.00 0.00 4.02
4740 4965 3.809832 CGGAGCTGTAAAATAGGATGGTG 59.190 47.826 0.00 0.00 0.00 4.17
4741 4966 3.181454 CCGGAGCTGTAAAATAGGATGGT 60.181 47.826 0.00 0.00 0.00 3.55
4742 4967 3.071023 TCCGGAGCTGTAAAATAGGATGG 59.929 47.826 0.00 0.00 0.00 3.51
4743 4968 4.336889 TCCGGAGCTGTAAAATAGGATG 57.663 45.455 0.00 0.00 0.00 3.51
4744 4969 4.202367 CCTTCCGGAGCTGTAAAATAGGAT 60.202 45.833 3.34 0.00 0.00 3.24
4745 4970 3.134081 CCTTCCGGAGCTGTAAAATAGGA 59.866 47.826 3.34 0.00 0.00 2.94
4746 4971 3.467803 CCTTCCGGAGCTGTAAAATAGG 58.532 50.000 3.34 0.00 0.00 2.57
4747 4972 2.872858 GCCTTCCGGAGCTGTAAAATAG 59.127 50.000 3.34 0.00 0.00 1.73
4748 4973 2.420967 GGCCTTCCGGAGCTGTAAAATA 60.421 50.000 14.67 0.00 0.00 1.40
4749 4974 1.682087 GGCCTTCCGGAGCTGTAAAAT 60.682 52.381 14.67 0.00 0.00 1.82
4750 4975 0.322187 GGCCTTCCGGAGCTGTAAAA 60.322 55.000 14.67 0.00 0.00 1.52
4751 4976 1.298667 GGCCTTCCGGAGCTGTAAA 59.701 57.895 14.67 0.00 0.00 2.01
4752 4977 2.987125 GGCCTTCCGGAGCTGTAA 59.013 61.111 14.67 0.00 0.00 2.41
4762 4987 1.763545 AGAACCTCTATTCGGCCTTCC 59.236 52.381 0.00 0.00 33.57 3.46
4763 4988 4.341520 TCTTAGAACCTCTATTCGGCCTTC 59.658 45.833 0.00 0.00 33.57 3.46
4764 4989 4.287552 TCTTAGAACCTCTATTCGGCCTT 58.712 43.478 0.00 0.00 33.57 4.35
4765 4990 3.892588 CTCTTAGAACCTCTATTCGGCCT 59.107 47.826 0.00 0.00 33.57 5.19
4766 4991 3.553302 GCTCTTAGAACCTCTATTCGGCC 60.553 52.174 0.00 0.00 33.57 6.13
4767 4992 3.068307 TGCTCTTAGAACCTCTATTCGGC 59.932 47.826 0.00 0.00 33.57 5.54
4768 4993 4.920640 TGCTCTTAGAACCTCTATTCGG 57.079 45.455 0.00 0.00 33.57 4.30
4769 4994 6.325919 AGATGCTCTTAGAACCTCTATTCG 57.674 41.667 0.00 0.00 33.57 3.34
4770 4995 8.172352 TGTAGATGCTCTTAGAACCTCTATTC 57.828 38.462 2.06 0.00 0.00 1.75
4771 4996 8.540507 TTGTAGATGCTCTTAGAACCTCTATT 57.459 34.615 2.06 0.00 0.00 1.73
4772 4997 8.719645 ATTGTAGATGCTCTTAGAACCTCTAT 57.280 34.615 2.06 0.00 0.00 1.98
4773 4998 7.780271 TGATTGTAGATGCTCTTAGAACCTCTA 59.220 37.037 0.00 0.00 0.00 2.43
4774 4999 6.609212 TGATTGTAGATGCTCTTAGAACCTCT 59.391 38.462 0.00 0.00 0.00 3.69
4775 5000 6.810911 TGATTGTAGATGCTCTTAGAACCTC 58.189 40.000 0.00 0.00 0.00 3.85
4776 5001 6.798427 TGATTGTAGATGCTCTTAGAACCT 57.202 37.500 0.00 0.00 0.00 3.50
4777 5002 8.364142 ACTATGATTGTAGATGCTCTTAGAACC 58.636 37.037 0.00 0.00 0.00 3.62
4778 5003 9.757227 AACTATGATTGTAGATGCTCTTAGAAC 57.243 33.333 0.00 0.00 0.00 3.01
4779 5004 9.755804 CAACTATGATTGTAGATGCTCTTAGAA 57.244 33.333 0.00 0.00 0.00 2.10
4780 5005 8.363390 CCAACTATGATTGTAGATGCTCTTAGA 58.637 37.037 0.00 0.00 0.00 2.10
4781 5006 7.117523 GCCAACTATGATTGTAGATGCTCTTAG 59.882 40.741 0.00 0.00 0.00 2.18
4782 5007 6.931281 GCCAACTATGATTGTAGATGCTCTTA 59.069 38.462 0.00 0.00 0.00 2.10
4783 5008 5.762218 GCCAACTATGATTGTAGATGCTCTT 59.238 40.000 0.00 0.00 0.00 2.85
4784 5009 5.163269 TGCCAACTATGATTGTAGATGCTCT 60.163 40.000 0.00 0.00 0.00 4.09
4785 5010 5.059161 TGCCAACTATGATTGTAGATGCTC 58.941 41.667 0.00 0.00 0.00 4.26
4786 5011 5.039920 TGCCAACTATGATTGTAGATGCT 57.960 39.130 0.00 0.00 0.00 3.79
4787 5012 5.954296 ATGCCAACTATGATTGTAGATGC 57.046 39.130 0.00 0.00 0.00 3.91
4788 5013 8.880750 CAGATATGCCAACTATGATTGTAGATG 58.119 37.037 0.00 0.00 0.00 2.90
4789 5014 8.045507 CCAGATATGCCAACTATGATTGTAGAT 58.954 37.037 0.00 0.00 0.00 1.98
4790 5015 7.389232 CCAGATATGCCAACTATGATTGTAGA 58.611 38.462 0.00 0.00 0.00 2.59
4791 5016 6.596888 CCCAGATATGCCAACTATGATTGTAG 59.403 42.308 0.00 0.00 0.00 2.74
4792 5017 6.475504 CCCAGATATGCCAACTATGATTGTA 58.524 40.000 0.00 0.00 0.00 2.41
4793 5018 5.319453 CCCAGATATGCCAACTATGATTGT 58.681 41.667 0.00 0.00 0.00 2.71
4794 5019 4.157289 GCCCAGATATGCCAACTATGATTG 59.843 45.833 0.00 0.00 0.00 2.67
4795 5020 4.338879 GCCCAGATATGCCAACTATGATT 58.661 43.478 0.00 0.00 0.00 2.57
4796 5021 3.960571 GCCCAGATATGCCAACTATGAT 58.039 45.455 0.00 0.00 0.00 2.45
4797 5022 3.423539 GCCCAGATATGCCAACTATGA 57.576 47.619 0.00 0.00 0.00 2.15
4806 5031 2.236395 ACGTATAAGGGCCCAGATATGC 59.764 50.000 27.56 20.03 0.00 3.14
4807 5032 4.504858 GAACGTATAAGGGCCCAGATATG 58.495 47.826 27.56 25.28 0.00 1.78
4808 5033 3.194968 CGAACGTATAAGGGCCCAGATAT 59.805 47.826 27.56 20.59 0.00 1.63
4809 5034 2.559668 CGAACGTATAAGGGCCCAGATA 59.440 50.000 27.56 17.89 0.00 1.98
4810 5035 1.343465 CGAACGTATAAGGGCCCAGAT 59.657 52.381 27.56 19.03 0.00 2.90
4811 5036 0.748450 CGAACGTATAAGGGCCCAGA 59.252 55.000 27.56 12.07 0.00 3.86
4812 5037 0.462789 ACGAACGTATAAGGGCCCAG 59.537 55.000 27.56 10.15 0.00 4.45
4813 5038 0.176219 CACGAACGTATAAGGGCCCA 59.824 55.000 27.56 3.72 0.00 5.36
4814 5039 0.531311 CCACGAACGTATAAGGGCCC 60.531 60.000 16.46 16.46 0.00 5.80
4815 5040 0.531311 CCCACGAACGTATAAGGGCC 60.531 60.000 0.00 0.00 0.00 5.80
4816 5041 2.981997 CCCACGAACGTATAAGGGC 58.018 57.895 7.37 0.00 0.00 5.19
4817 5042 0.462789 AGCCCACGAACGTATAAGGG 59.537 55.000 13.63 13.63 39.33 3.95
4818 5043 1.135527 TGAGCCCACGAACGTATAAGG 59.864 52.381 0.00 0.00 0.00 2.69
4819 5044 2.572191 TGAGCCCACGAACGTATAAG 57.428 50.000 0.00 0.00 0.00 1.73
4820 5045 3.530265 AATGAGCCCACGAACGTATAA 57.470 42.857 0.00 0.00 0.00 0.98
4821 5046 3.005050 CCTAATGAGCCCACGAACGTATA 59.995 47.826 0.00 0.00 0.00 1.47
4822 5047 2.223971 CCTAATGAGCCCACGAACGTAT 60.224 50.000 0.00 0.00 0.00 3.06
4823 5048 1.135527 CCTAATGAGCCCACGAACGTA 59.864 52.381 0.00 0.00 0.00 3.57
4824 5049 0.108329 CCTAATGAGCCCACGAACGT 60.108 55.000 0.00 0.00 0.00 3.99
4825 5050 0.108329 ACCTAATGAGCCCACGAACG 60.108 55.000 0.00 0.00 0.00 3.95
4826 5051 1.066430 TGACCTAATGAGCCCACGAAC 60.066 52.381 0.00 0.00 0.00 3.95
4827 5052 1.066430 GTGACCTAATGAGCCCACGAA 60.066 52.381 0.00 0.00 0.00 3.85
4828 5053 0.535335 GTGACCTAATGAGCCCACGA 59.465 55.000 0.00 0.00 0.00 4.35
4829 5054 0.462047 GGTGACCTAATGAGCCCACG 60.462 60.000 0.00 0.00 0.00 4.94
4830 5055 3.478540 GGTGACCTAATGAGCCCAC 57.521 57.895 0.00 0.00 0.00 4.61
4852 5077 1.291877 ACAAATGACTCGCTGACCGC 61.292 55.000 0.00 0.00 36.73 5.68
4853 5078 0.716108 GACAAATGACTCGCTGACCG 59.284 55.000 0.00 0.00 38.61 4.79
4854 5079 1.079503 GGACAAATGACTCGCTGACC 58.920 55.000 0.00 0.00 0.00 4.02
4855 5080 1.996191 GAGGACAAATGACTCGCTGAC 59.004 52.381 0.00 0.00 0.00 3.51
4856 5081 1.066858 GGAGGACAAATGACTCGCTGA 60.067 52.381 0.00 0.00 32.11 4.26
4857 5082 1.363744 GGAGGACAAATGACTCGCTG 58.636 55.000 0.00 0.00 32.11 5.18
4858 5083 0.250513 GGGAGGACAAATGACTCGCT 59.749 55.000 14.51 0.00 40.00 4.93
4859 5084 0.250513 AGGGAGGACAAATGACTCGC 59.749 55.000 14.19 14.19 42.46 5.03
4860 5085 1.550524 TGAGGGAGGACAAATGACTCG 59.449 52.381 0.00 0.00 32.11 4.18
4861 5086 2.303022 TGTGAGGGAGGACAAATGACTC 59.697 50.000 0.00 0.00 0.00 3.36
4862 5087 2.338809 TGTGAGGGAGGACAAATGACT 58.661 47.619 0.00 0.00 0.00 3.41
4863 5088 2.814336 GTTGTGAGGGAGGACAAATGAC 59.186 50.000 0.00 0.00 33.96 3.06
4864 5089 2.224769 GGTTGTGAGGGAGGACAAATGA 60.225 50.000 0.00 0.00 33.96 2.57
4865 5090 2.162681 GGTTGTGAGGGAGGACAAATG 58.837 52.381 0.00 0.00 33.96 2.32
4866 5091 1.780309 TGGTTGTGAGGGAGGACAAAT 59.220 47.619 0.00 0.00 33.96 2.32
4867 5092 1.133915 GTGGTTGTGAGGGAGGACAAA 60.134 52.381 0.00 0.00 33.96 2.83
4868 5093 0.472471 GTGGTTGTGAGGGAGGACAA 59.528 55.000 0.00 0.00 0.00 3.18
4869 5094 1.415672 GGTGGTTGTGAGGGAGGACA 61.416 60.000 0.00 0.00 0.00 4.02
4870 5095 1.128188 AGGTGGTTGTGAGGGAGGAC 61.128 60.000 0.00 0.00 0.00 3.85
4871 5096 0.401395 AAGGTGGTTGTGAGGGAGGA 60.401 55.000 0.00 0.00 0.00 3.71
4872 5097 1.358152 TAAGGTGGTTGTGAGGGAGG 58.642 55.000 0.00 0.00 0.00 4.30
4873 5098 4.202367 GGATATAAGGTGGTTGTGAGGGAG 60.202 50.000 0.00 0.00 0.00 4.30
4874 5099 3.714798 GGATATAAGGTGGTTGTGAGGGA 59.285 47.826 0.00 0.00 0.00 4.20
4875 5100 3.181443 GGGATATAAGGTGGTTGTGAGGG 60.181 52.174 0.00 0.00 0.00 4.30
4876 5101 3.458118 TGGGATATAAGGTGGTTGTGAGG 59.542 47.826 0.00 0.00 0.00 3.86
4877 5102 4.771114 TGGGATATAAGGTGGTTGTGAG 57.229 45.455 0.00 0.00 0.00 3.51
4878 5103 5.725551 ATTGGGATATAAGGTGGTTGTGA 57.274 39.130 0.00 0.00 0.00 3.58
4879 5104 5.768164 GGTATTGGGATATAAGGTGGTTGTG 59.232 44.000 0.00 0.00 0.00 3.33
4880 5105 5.163023 GGGTATTGGGATATAAGGTGGTTGT 60.163 44.000 0.00 0.00 0.00 3.32
4881 5106 5.163034 TGGGTATTGGGATATAAGGTGGTTG 60.163 44.000 0.00 0.00 0.00 3.77
4882 5107 4.985583 TGGGTATTGGGATATAAGGTGGTT 59.014 41.667 0.00 0.00 0.00 3.67
4883 5108 4.583309 TGGGTATTGGGATATAAGGTGGT 58.417 43.478 0.00 0.00 0.00 4.16
4884 5109 5.592587 TTGGGTATTGGGATATAAGGTGG 57.407 43.478 0.00 0.00 0.00 4.61
4885 5110 7.728083 TGAATTTGGGTATTGGGATATAAGGTG 59.272 37.037 0.00 0.00 0.00 4.00
4886 5111 7.831955 TGAATTTGGGTATTGGGATATAAGGT 58.168 34.615 0.00 0.00 0.00 3.50
4887 5112 8.752187 CATGAATTTGGGTATTGGGATATAAGG 58.248 37.037 0.00 0.00 0.00 2.69
4888 5113 8.253113 GCATGAATTTGGGTATTGGGATATAAG 58.747 37.037 0.00 0.00 0.00 1.73
4889 5114 7.732140 TGCATGAATTTGGGTATTGGGATATAA 59.268 33.333 0.00 0.00 0.00 0.98
4890 5115 7.244558 TGCATGAATTTGGGTATTGGGATATA 58.755 34.615 0.00 0.00 0.00 0.86
4891 5116 6.083383 TGCATGAATTTGGGTATTGGGATAT 58.917 36.000 0.00 0.00 0.00 1.63
4892 5117 5.462240 TGCATGAATTTGGGTATTGGGATA 58.538 37.500 0.00 0.00 0.00 2.59
4893 5118 4.296912 TGCATGAATTTGGGTATTGGGAT 58.703 39.130 0.00 0.00 0.00 3.85
4894 5119 3.717576 TGCATGAATTTGGGTATTGGGA 58.282 40.909 0.00 0.00 0.00 4.37
4895 5120 4.484537 TTGCATGAATTTGGGTATTGGG 57.515 40.909 0.00 0.00 0.00 4.12
4896 5121 6.598457 TGAATTTGCATGAATTTGGGTATTGG 59.402 34.615 0.00 0.00 29.75 3.16
4897 5122 7.612668 TGAATTTGCATGAATTTGGGTATTG 57.387 32.000 0.00 0.00 29.75 1.90
4898 5123 9.328845 GTATGAATTTGCATGAATTTGGGTATT 57.671 29.630 0.00 0.00 29.75 1.89
4899 5124 8.484575 TGTATGAATTTGCATGAATTTGGGTAT 58.515 29.630 0.00 0.00 29.75 2.73
4900 5125 7.763528 GTGTATGAATTTGCATGAATTTGGGTA 59.236 33.333 0.00 0.00 29.75 3.69
4901 5126 6.594937 GTGTATGAATTTGCATGAATTTGGGT 59.405 34.615 0.00 0.00 29.75 4.51
4902 5127 6.237888 CGTGTATGAATTTGCATGAATTTGGG 60.238 38.462 0.00 0.00 29.75 4.12
4903 5128 6.310956 ACGTGTATGAATTTGCATGAATTTGG 59.689 34.615 0.00 0.00 29.75 3.28
4904 5129 7.280730 ACGTGTATGAATTTGCATGAATTTG 57.719 32.000 0.00 0.00 29.75 2.32
4905 5130 6.531240 GGACGTGTATGAATTTGCATGAATTT 59.469 34.615 0.00 0.00 29.75 1.82
4906 5131 6.035843 GGACGTGTATGAATTTGCATGAATT 58.964 36.000 0.00 0.00 32.16 2.17
4907 5132 5.125257 TGGACGTGTATGAATTTGCATGAAT 59.875 36.000 0.00 0.00 0.00 2.57
4908 5133 4.457257 TGGACGTGTATGAATTTGCATGAA 59.543 37.500 0.00 0.00 0.00 2.57
4909 5134 4.006319 TGGACGTGTATGAATTTGCATGA 58.994 39.130 0.00 0.00 0.00 3.07
4910 5135 4.354071 TGGACGTGTATGAATTTGCATG 57.646 40.909 0.00 0.00 0.00 4.06
4911 5136 4.639755 TGATGGACGTGTATGAATTTGCAT 59.360 37.500 0.00 0.00 0.00 3.96
4912 5137 4.006319 TGATGGACGTGTATGAATTTGCA 58.994 39.130 0.00 0.00 0.00 4.08
4913 5138 4.142708 TGTGATGGACGTGTATGAATTTGC 60.143 41.667 0.00 0.00 0.00 3.68
4914 5139 5.544136 TGTGATGGACGTGTATGAATTTG 57.456 39.130 0.00 0.00 0.00 2.32
4915 5140 7.465379 CGTTATGTGATGGACGTGTATGAATTT 60.465 37.037 0.00 0.00 0.00 1.82
4916 5141 6.019075 CGTTATGTGATGGACGTGTATGAATT 60.019 38.462 0.00 0.00 0.00 2.17
4917 5142 5.462068 CGTTATGTGATGGACGTGTATGAAT 59.538 40.000 0.00 0.00 0.00 2.57
4918 5143 4.801516 CGTTATGTGATGGACGTGTATGAA 59.198 41.667 0.00 0.00 0.00 2.57
4919 5144 4.142337 ACGTTATGTGATGGACGTGTATGA 60.142 41.667 0.00 0.00 45.75 2.15
4920 5145 4.109766 ACGTTATGTGATGGACGTGTATG 58.890 43.478 0.00 0.00 45.75 2.39
4921 5146 4.380841 ACGTTATGTGATGGACGTGTAT 57.619 40.909 0.00 0.00 45.75 2.29
4922 5147 3.853831 ACGTTATGTGATGGACGTGTA 57.146 42.857 0.00 0.00 45.75 2.90
4923 5148 2.736144 ACGTTATGTGATGGACGTGT 57.264 45.000 0.00 0.00 45.75 4.49
4924 5149 5.712217 ATTTACGTTATGTGATGGACGTG 57.288 39.130 10.23 0.00 46.73 4.49
4926 5151 6.339194 TGAATTTACGTTATGTGATGGACG 57.661 37.500 0.00 0.00 41.00 4.79
4927 5152 7.915508 TGATGAATTTACGTTATGTGATGGAC 58.084 34.615 0.00 0.00 0.00 4.02
4928 5153 8.675705 ATGATGAATTTACGTTATGTGATGGA 57.324 30.769 0.00 0.00 0.00 3.41
4943 5168 8.885722 GGCATGTGTTGAATTTATGATGAATTT 58.114 29.630 0.00 0.00 0.00 1.82
4944 5169 8.041919 TGGCATGTGTTGAATTTATGATGAATT 58.958 29.630 0.00 0.00 0.00 2.17
4945 5170 7.557724 TGGCATGTGTTGAATTTATGATGAAT 58.442 30.769 0.00 0.00 0.00 2.57
4946 5171 6.932947 TGGCATGTGTTGAATTTATGATGAA 58.067 32.000 0.00 0.00 0.00 2.57
4947 5172 6.527057 TGGCATGTGTTGAATTTATGATGA 57.473 33.333 0.00 0.00 0.00 2.92
4948 5173 7.598189 TTTGGCATGTGTTGAATTTATGATG 57.402 32.000 0.00 0.00 0.00 3.07
4949 5174 8.795842 ATTTTGGCATGTGTTGAATTTATGAT 57.204 26.923 0.00 0.00 0.00 2.45
4950 5175 9.716531 TTATTTTGGCATGTGTTGAATTTATGA 57.283 25.926 0.00 0.00 0.00 2.15
4954 5179 9.064706 TGAATTATTTTGGCATGTGTTGAATTT 57.935 25.926 0.00 0.00 0.00 1.82
4955 5180 8.618702 TGAATTATTTTGGCATGTGTTGAATT 57.381 26.923 0.00 0.00 0.00 2.17
4956 5181 8.505625 GTTGAATTATTTTGGCATGTGTTGAAT 58.494 29.630 0.00 0.00 0.00 2.57
4957 5182 7.496920 TGTTGAATTATTTTGGCATGTGTTGAA 59.503 29.630 0.00 0.00 0.00 2.69
4958 5183 6.988580 TGTTGAATTATTTTGGCATGTGTTGA 59.011 30.769 0.00 0.00 0.00 3.18
4959 5184 7.187244 TGTTGAATTATTTTGGCATGTGTTG 57.813 32.000 0.00 0.00 0.00 3.33
4960 5185 7.982761 ATGTTGAATTATTTTGGCATGTGTT 57.017 28.000 0.00 0.00 0.00 3.32
4961 5186 7.982761 AATGTTGAATTATTTTGGCATGTGT 57.017 28.000 0.00 0.00 0.00 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.