Multiple sequence alignment - TraesCS2D01G290100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G290100 chr2D 100.000 5249 0 0 1 5249 372277165 372271917 0.000000e+00 9694
1 TraesCS2D01G290100 chr2A 93.921 4129 167 26 346 4446 503006981 503002909 0.000000e+00 6157
2 TraesCS2D01G290100 chr2A 86.047 817 44 29 4471 5249 503002787 503002003 0.000000e+00 813
3 TraesCS2D01G290100 chr2A 85.714 98 14 0 263 360 581966517 581966614 2.590000e-18 104
4 TraesCS2D01G290100 chr2B 94.720 2576 88 21 1849 4419 441862417 441859885 0.000000e+00 3960
5 TraesCS2D01G290100 chr2B 94.271 1187 47 8 646 1832 441867385 441866220 0.000000e+00 1796
6 TraesCS2D01G290100 chr5B 97.115 104 3 0 4568 4671 45810413 45810310 5.400000e-40 176
7 TraesCS2D01G290100 chr7A 88.889 99 10 1 263 360 719507267 719507365 2.570000e-23 121
8 TraesCS2D01G290100 chr7A 88.372 86 10 0 275 360 116601361 116601276 2.590000e-18 104
9 TraesCS2D01G290100 chr4A 86.458 96 13 0 263 358 727800260 727800165 7.190000e-19 106
10 TraesCS2D01G290100 chr7B 88.372 86 10 0 275 360 570177903 570177818 2.590000e-18 104
11 TraesCS2D01G290100 chr6A 88.372 86 10 0 275 360 583044016 583043931 2.590000e-18 104
12 TraesCS2D01G290100 chr5D 85.714 98 14 0 263 360 344532471 344532374 2.590000e-18 104
13 TraesCS2D01G290100 chr5D 83.962 106 17 0 255 360 549312502 549312607 9.300000e-18 102
14 TraesCS2D01G290100 chr3B 88.372 86 10 0 275 360 47745399 47745314 2.590000e-18 104


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G290100 chr2D 372271917 372277165 5248 True 9694 9694 100.0000 1 5249 1 chr2D.!!$R1 5248
1 TraesCS2D01G290100 chr2A 503002003 503006981 4978 True 3485 6157 89.9840 346 5249 2 chr2A.!!$R1 4903
2 TraesCS2D01G290100 chr2B 441859885 441867385 7500 True 2878 3960 94.4955 646 4419 2 chr2B.!!$R1 3773

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
261 262 0.101759 TTACTACGGATGCAGACGGC 59.898 55.000 15.85 0.0 45.13 5.68 F
302 303 0.106708 ATCCCTATGAACGCACGCAT 59.893 50.000 0.00 0.0 0.00 4.73 F
1223 1239 0.321122 AGTGCTGAGTGTTAGCTGCC 60.321 55.000 0.00 0.0 41.66 4.85 F
2069 5875 0.820871 TTTGATGCCCCCATTTACGC 59.179 50.000 0.00 0.0 0.00 4.42 F
2651 6457 1.898574 CGCTATGGCATGGGGAACC 60.899 63.158 20.91 0.0 45.52 3.62 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1494 1510 0.463295 AGGCCATGAACAGAGCGATG 60.463 55.000 5.01 0.0 0.00 3.84 R
2109 5915 1.474320 CGCCCTTCATACATTCGGGAA 60.474 52.381 0.00 0.0 37.05 3.97 R
2852 6658 0.232303 GTGCACACGCCTATATTCGC 59.768 55.000 13.17 0.0 37.32 4.70 R
3463 7271 0.039617 CGCCTCTAGGAAGAGCATCG 60.040 60.000 0.00 0.0 46.84 3.84 R
4611 8519 0.390866 ACAGCGAGCCTGAGATGTTG 60.391 55.000 0.00 0.0 44.64 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 5.700402 TTTTCTATGGGAAAGAGAGAGGG 57.300 43.478 0.00 0.00 43.68 4.30
26 27 4.354208 TTCTATGGGAAAGAGAGAGGGT 57.646 45.455 0.00 0.00 0.00 4.34
27 28 3.917300 TCTATGGGAAAGAGAGAGGGTC 58.083 50.000 0.00 0.00 0.00 4.46
28 29 2.649742 ATGGGAAAGAGAGAGGGTCA 57.350 50.000 0.00 0.00 0.00 4.02
29 30 2.649742 TGGGAAAGAGAGAGGGTCAT 57.350 50.000 0.00 0.00 0.00 3.06
30 31 2.921221 TGGGAAAGAGAGAGGGTCATT 58.079 47.619 0.00 0.00 0.00 2.57
31 32 2.573462 TGGGAAAGAGAGAGGGTCATTG 59.427 50.000 0.00 0.00 0.00 2.82
32 33 2.092699 GGGAAAGAGAGAGGGTCATTGG 60.093 54.545 0.00 0.00 0.00 3.16
33 34 2.573915 GGAAAGAGAGAGGGTCATTGGT 59.426 50.000 0.00 0.00 0.00 3.67
34 35 3.009584 GGAAAGAGAGAGGGTCATTGGTT 59.990 47.826 0.00 0.00 0.00 3.67
35 36 3.710209 AAGAGAGAGGGTCATTGGTTG 57.290 47.619 0.00 0.00 0.00 3.77
36 37 2.907892 AGAGAGAGGGTCATTGGTTGA 58.092 47.619 0.00 0.00 0.00 3.18
37 38 3.458831 AGAGAGAGGGTCATTGGTTGAT 58.541 45.455 0.00 0.00 36.54 2.57
38 39 3.199508 AGAGAGAGGGTCATTGGTTGATG 59.800 47.826 0.00 0.00 36.54 3.07
39 40 2.915604 AGAGAGGGTCATTGGTTGATGT 59.084 45.455 0.00 0.00 36.54 3.06
40 41 3.054802 AGAGAGGGTCATTGGTTGATGTC 60.055 47.826 0.00 0.00 36.54 3.06
41 42 2.025887 AGAGGGTCATTGGTTGATGTCC 60.026 50.000 0.00 0.00 36.54 4.02
42 43 1.710244 AGGGTCATTGGTTGATGTCCA 59.290 47.619 4.13 0.00 37.08 4.02
43 44 2.094675 GGGTCATTGGTTGATGTCCAG 58.905 52.381 4.13 0.00 37.08 3.86
44 45 2.094675 GGTCATTGGTTGATGTCCAGG 58.905 52.381 0.00 0.00 36.54 4.45
45 46 2.290896 GGTCATTGGTTGATGTCCAGGA 60.291 50.000 0.00 0.00 36.54 3.86
46 47 3.012518 GTCATTGGTTGATGTCCAGGAG 58.987 50.000 0.00 0.00 36.54 3.69
47 48 2.644299 TCATTGGTTGATGTCCAGGAGT 59.356 45.455 0.00 0.00 36.28 3.85
48 49 3.843619 TCATTGGTTGATGTCCAGGAGTA 59.156 43.478 0.00 0.00 36.28 2.59
49 50 4.474651 TCATTGGTTGATGTCCAGGAGTAT 59.525 41.667 0.00 0.00 36.28 2.12
50 51 5.665360 TCATTGGTTGATGTCCAGGAGTATA 59.335 40.000 0.00 0.00 36.28 1.47
51 52 5.614324 TTGGTTGATGTCCAGGAGTATAG 57.386 43.478 0.00 0.00 36.28 1.31
52 53 4.878968 TGGTTGATGTCCAGGAGTATAGA 58.121 43.478 0.00 0.00 0.00 1.98
53 54 5.467738 TGGTTGATGTCCAGGAGTATAGAT 58.532 41.667 0.00 0.00 0.00 1.98
54 55 6.620429 TGGTTGATGTCCAGGAGTATAGATA 58.380 40.000 0.00 0.00 0.00 1.98
55 56 7.073208 TGGTTGATGTCCAGGAGTATAGATAA 58.927 38.462 0.00 0.00 0.00 1.75
56 57 7.567250 TGGTTGATGTCCAGGAGTATAGATAAA 59.433 37.037 0.00 0.00 0.00 1.40
57 58 8.598041 GGTTGATGTCCAGGAGTATAGATAAAT 58.402 37.037 0.00 0.00 0.00 1.40
58 59 9.646427 GTTGATGTCCAGGAGTATAGATAAATC 57.354 37.037 0.00 0.00 0.00 2.17
59 60 8.956446 TGATGTCCAGGAGTATAGATAAATCA 57.044 34.615 0.00 0.00 0.00 2.57
60 61 9.552695 TGATGTCCAGGAGTATAGATAAATCAT 57.447 33.333 0.00 0.00 0.00 2.45
61 62 9.814899 GATGTCCAGGAGTATAGATAAATCATG 57.185 37.037 0.00 0.00 0.00 3.07
62 63 8.727100 TGTCCAGGAGTATAGATAAATCATGT 57.273 34.615 0.00 0.00 0.00 3.21
63 64 9.159254 TGTCCAGGAGTATAGATAAATCATGTT 57.841 33.333 0.00 0.00 0.00 2.71
64 65 9.646427 GTCCAGGAGTATAGATAAATCATGTTC 57.354 37.037 0.00 0.00 0.00 3.18
65 66 9.607333 TCCAGGAGTATAGATAAATCATGTTCT 57.393 33.333 0.00 0.00 0.00 3.01
83 84 9.300681 TCATGTTCTTTTAATCATTTGGAGTCT 57.699 29.630 0.00 0.00 0.00 3.24
84 85 9.350357 CATGTTCTTTTAATCATTTGGAGTCTG 57.650 33.333 0.00 0.00 0.00 3.51
85 86 7.885297 TGTTCTTTTAATCATTTGGAGTCTGG 58.115 34.615 0.00 0.00 0.00 3.86
86 87 7.505585 TGTTCTTTTAATCATTTGGAGTCTGGT 59.494 33.333 0.00 0.00 0.00 4.00
87 88 9.010029 GTTCTTTTAATCATTTGGAGTCTGGTA 57.990 33.333 0.00 0.00 0.00 3.25
88 89 9.581289 TTCTTTTAATCATTTGGAGTCTGGTAA 57.419 29.630 0.00 0.00 0.00 2.85
89 90 9.581289 TCTTTTAATCATTTGGAGTCTGGTAAA 57.419 29.630 0.00 0.00 0.00 2.01
90 91 9.626045 CTTTTAATCATTTGGAGTCTGGTAAAC 57.374 33.333 0.00 0.00 0.00 2.01
91 92 8.934023 TTTAATCATTTGGAGTCTGGTAAACT 57.066 30.769 0.00 0.00 0.00 2.66
92 93 8.934023 TTAATCATTTGGAGTCTGGTAAACTT 57.066 30.769 0.00 0.00 0.00 2.66
93 94 7.839680 AATCATTTGGAGTCTGGTAAACTTT 57.160 32.000 0.00 0.00 0.00 2.66
94 95 6.633500 TCATTTGGAGTCTGGTAAACTTTG 57.367 37.500 0.00 0.00 0.00 2.77
95 96 6.126409 TCATTTGGAGTCTGGTAAACTTTGT 58.874 36.000 0.00 0.00 0.00 2.83
96 97 5.828299 TTTGGAGTCTGGTAAACTTTGTG 57.172 39.130 0.00 0.00 0.00 3.33
97 98 4.764050 TGGAGTCTGGTAAACTTTGTGA 57.236 40.909 0.00 0.00 0.00 3.58
98 99 4.703897 TGGAGTCTGGTAAACTTTGTGAG 58.296 43.478 0.00 0.00 0.00 3.51
99 100 4.407621 TGGAGTCTGGTAAACTTTGTGAGA 59.592 41.667 0.00 0.00 0.00 3.27
100 101 5.104693 TGGAGTCTGGTAAACTTTGTGAGAA 60.105 40.000 0.00 0.00 0.00 2.87
101 102 5.820947 GGAGTCTGGTAAACTTTGTGAGAAA 59.179 40.000 0.00 0.00 0.00 2.52
102 103 6.317893 GGAGTCTGGTAAACTTTGTGAGAAAA 59.682 38.462 0.00 0.00 0.00 2.29
103 104 7.148137 GGAGTCTGGTAAACTTTGTGAGAAAAA 60.148 37.037 0.00 0.00 0.00 1.94
140 141 9.981114 ATTCTACCAAAACTTGTTTCAAATAGG 57.019 29.630 0.00 0.00 0.00 2.57
141 142 7.947282 TCTACCAAAACTTGTTTCAAATAGGG 58.053 34.615 0.00 0.00 0.00 3.53
142 143 6.553953 ACCAAAACTTGTTTCAAATAGGGT 57.446 33.333 0.00 0.00 0.00 4.34
143 144 7.663043 ACCAAAACTTGTTTCAAATAGGGTA 57.337 32.000 0.00 0.00 0.00 3.69
144 145 8.080363 ACCAAAACTTGTTTCAAATAGGGTAA 57.920 30.769 0.00 0.00 0.00 2.85
145 146 8.710239 ACCAAAACTTGTTTCAAATAGGGTAAT 58.290 29.630 0.00 0.00 0.00 1.89
146 147 9.554395 CCAAAACTTGTTTCAAATAGGGTAATT 57.446 29.630 0.00 0.00 0.00 1.40
168 169 5.837586 TTTTTGCGAAGATGCCAAAATAC 57.162 34.783 0.00 0.00 35.38 1.89
169 170 3.502191 TTGCGAAGATGCCAAAATACC 57.498 42.857 0.00 0.00 0.00 2.73
170 171 1.748493 TGCGAAGATGCCAAAATACCC 59.252 47.619 0.00 0.00 0.00 3.69
171 172 2.024414 GCGAAGATGCCAAAATACCCT 58.976 47.619 0.00 0.00 0.00 4.34
172 173 3.211045 GCGAAGATGCCAAAATACCCTA 58.789 45.455 0.00 0.00 0.00 3.53
173 174 3.630312 GCGAAGATGCCAAAATACCCTAA 59.370 43.478 0.00 0.00 0.00 2.69
174 175 4.097286 GCGAAGATGCCAAAATACCCTAAA 59.903 41.667 0.00 0.00 0.00 1.85
175 176 5.578776 CGAAGATGCCAAAATACCCTAAAC 58.421 41.667 0.00 0.00 0.00 2.01
176 177 5.449999 CGAAGATGCCAAAATACCCTAAACC 60.450 44.000 0.00 0.00 0.00 3.27
177 178 5.206905 AGATGCCAAAATACCCTAAACCT 57.793 39.130 0.00 0.00 0.00 3.50
178 179 6.335781 AGATGCCAAAATACCCTAAACCTA 57.664 37.500 0.00 0.00 0.00 3.08
179 180 6.365520 AGATGCCAAAATACCCTAAACCTAG 58.634 40.000 0.00 0.00 0.00 3.02
180 181 5.782677 TGCCAAAATACCCTAAACCTAGA 57.217 39.130 0.00 0.00 0.00 2.43
181 182 5.503002 TGCCAAAATACCCTAAACCTAGAC 58.497 41.667 0.00 0.00 0.00 2.59
182 183 4.885907 GCCAAAATACCCTAAACCTAGACC 59.114 45.833 0.00 0.00 0.00 3.85
183 184 5.121105 CCAAAATACCCTAAACCTAGACCG 58.879 45.833 0.00 0.00 0.00 4.79
184 185 5.338626 CCAAAATACCCTAAACCTAGACCGT 60.339 44.000 0.00 0.00 0.00 4.83
185 186 6.127083 CCAAAATACCCTAAACCTAGACCGTA 60.127 42.308 0.00 0.00 0.00 4.02
186 187 7.419403 CCAAAATACCCTAAACCTAGACCGTAT 60.419 40.741 0.00 0.00 0.00 3.06
187 188 8.641541 CAAAATACCCTAAACCTAGACCGTATA 58.358 37.037 0.00 0.00 0.00 1.47
188 189 8.962912 AAATACCCTAAACCTAGACCGTATAT 57.037 34.615 0.00 0.00 0.00 0.86
189 190 8.962912 AATACCCTAAACCTAGACCGTATATT 57.037 34.615 0.00 0.00 0.00 1.28
190 191 6.661304 ACCCTAAACCTAGACCGTATATTG 57.339 41.667 0.00 0.00 0.00 1.90
191 192 6.138967 ACCCTAAACCTAGACCGTATATTGT 58.861 40.000 0.00 0.00 0.00 2.71
192 193 6.041296 ACCCTAAACCTAGACCGTATATTGTG 59.959 42.308 0.00 0.00 0.00 3.33
193 194 6.041296 CCCTAAACCTAGACCGTATATTGTGT 59.959 42.308 0.00 0.00 0.00 3.72
194 195 7.144000 CCTAAACCTAGACCGTATATTGTGTC 58.856 42.308 0.00 0.00 0.00 3.67
195 196 6.534475 AAACCTAGACCGTATATTGTGTCA 57.466 37.500 0.00 0.00 0.00 3.58
196 197 6.534475 AACCTAGACCGTATATTGTGTCAA 57.466 37.500 0.00 0.00 0.00 3.18
197 198 6.145338 ACCTAGACCGTATATTGTGTCAAG 57.855 41.667 0.00 0.00 0.00 3.02
198 199 5.889853 ACCTAGACCGTATATTGTGTCAAGA 59.110 40.000 0.00 0.00 0.00 3.02
199 200 6.550108 ACCTAGACCGTATATTGTGTCAAGAT 59.450 38.462 0.00 0.00 0.00 2.40
200 201 7.722728 ACCTAGACCGTATATTGTGTCAAGATA 59.277 37.037 0.00 0.00 0.00 1.98
201 202 8.573885 CCTAGACCGTATATTGTGTCAAGATAA 58.426 37.037 0.00 0.00 0.00 1.75
202 203 9.961265 CTAGACCGTATATTGTGTCAAGATAAA 57.039 33.333 0.00 0.00 0.00 1.40
203 204 8.644318 AGACCGTATATTGTGTCAAGATAAAC 57.356 34.615 0.00 0.00 0.00 2.01
204 205 8.255206 AGACCGTATATTGTGTCAAGATAAACA 58.745 33.333 0.00 0.00 0.00 2.83
205 206 8.193250 ACCGTATATTGTGTCAAGATAAACAC 57.807 34.615 0.00 0.00 44.75 3.32
206 207 7.279313 ACCGTATATTGTGTCAAGATAAACACC 59.721 37.037 3.44 0.00 44.06 4.16
207 208 7.279090 CCGTATATTGTGTCAAGATAAACACCA 59.721 37.037 3.44 0.00 44.06 4.17
208 209 8.826710 CGTATATTGTGTCAAGATAAACACCAT 58.173 33.333 3.44 1.17 44.06 3.55
213 214 9.912634 ATTGTGTCAAGATAAACACCATAAAAG 57.087 29.630 3.44 0.00 44.06 2.27
214 215 8.458573 TGTGTCAAGATAAACACCATAAAAGT 57.541 30.769 3.44 0.00 44.06 2.66
215 216 8.908903 TGTGTCAAGATAAACACCATAAAAGTT 58.091 29.630 3.44 0.00 44.06 2.66
216 217 9.180678 GTGTCAAGATAAACACCATAAAAGTTG 57.819 33.333 0.00 0.00 39.87 3.16
217 218 8.908903 TGTCAAGATAAACACCATAAAAGTTGT 58.091 29.630 0.00 0.00 0.00 3.32
218 219 9.744468 GTCAAGATAAACACCATAAAAGTTGTT 57.256 29.630 0.00 0.00 0.00 2.83
254 255 9.783256 AAATTATGTTTTTCTTACTACGGATGC 57.217 29.630 0.00 0.00 0.00 3.91
255 256 7.908827 TTATGTTTTTCTTACTACGGATGCA 57.091 32.000 0.00 0.00 0.00 3.96
256 257 5.856126 TGTTTTTCTTACTACGGATGCAG 57.144 39.130 0.00 0.00 0.00 4.41
257 258 5.543714 TGTTTTTCTTACTACGGATGCAGA 58.456 37.500 0.00 0.00 0.00 4.26
258 259 5.407387 TGTTTTTCTTACTACGGATGCAGAC 59.593 40.000 0.00 0.00 0.00 3.51
259 260 3.416119 TTCTTACTACGGATGCAGACG 57.584 47.619 10.80 10.80 0.00 4.18
260 261 1.674441 TCTTACTACGGATGCAGACGG 59.326 52.381 15.85 8.35 0.00 4.79
261 262 0.101759 TTACTACGGATGCAGACGGC 59.898 55.000 15.85 0.00 45.13 5.68
262 263 1.731433 TACTACGGATGCAGACGGCC 61.731 60.000 15.85 0.00 43.89 6.13
263 264 3.071837 TACGGATGCAGACGGCCA 61.072 61.111 15.85 0.11 43.89 5.36
264 265 2.369257 CTACGGATGCAGACGGCCAT 62.369 60.000 15.85 0.00 43.89 4.40
265 266 1.110518 TACGGATGCAGACGGCCATA 61.111 55.000 15.85 0.00 43.89 2.74
266 267 1.956170 CGGATGCAGACGGCCATAC 60.956 63.158 2.24 0.00 43.89 2.39
267 268 1.146041 GGATGCAGACGGCCATACA 59.854 57.895 2.24 0.00 43.89 2.29
268 269 0.250467 GGATGCAGACGGCCATACAT 60.250 55.000 2.24 0.00 43.89 2.29
269 270 1.001974 GGATGCAGACGGCCATACATA 59.998 52.381 2.24 0.00 43.89 2.29
270 271 2.069273 GATGCAGACGGCCATACATAC 58.931 52.381 2.24 0.00 43.89 2.39
271 272 0.827368 TGCAGACGGCCATACATACA 59.173 50.000 2.24 0.00 43.89 2.29
272 273 1.217882 GCAGACGGCCATACATACAC 58.782 55.000 2.24 0.00 36.11 2.90
273 274 1.472552 GCAGACGGCCATACATACACA 60.473 52.381 2.24 0.00 36.11 3.72
274 275 2.201732 CAGACGGCCATACATACACAC 58.798 52.381 2.24 0.00 0.00 3.82
275 276 1.828595 AGACGGCCATACATACACACA 59.171 47.619 2.24 0.00 0.00 3.72
276 277 2.434336 AGACGGCCATACATACACACAT 59.566 45.455 2.24 0.00 0.00 3.21
277 278 3.639561 AGACGGCCATACATACACACATA 59.360 43.478 2.24 0.00 0.00 2.29
278 279 3.724374 ACGGCCATACATACACACATAC 58.276 45.455 2.24 0.00 0.00 2.39
279 280 3.133183 ACGGCCATACATACACACATACA 59.867 43.478 2.24 0.00 0.00 2.29
280 281 3.493129 CGGCCATACATACACACATACAC 59.507 47.826 2.24 0.00 0.00 2.90
281 282 4.703897 GGCCATACATACACACATACACT 58.296 43.478 0.00 0.00 0.00 3.55
282 283 4.750098 GGCCATACATACACACATACACTC 59.250 45.833 0.00 0.00 0.00 3.51
283 284 5.356426 GCCATACATACACACATACACTCA 58.644 41.667 0.00 0.00 0.00 3.41
284 285 5.991606 GCCATACATACACACATACACTCAT 59.008 40.000 0.00 0.00 0.00 2.90
285 286 6.146184 GCCATACATACACACATACACTCATC 59.854 42.308 0.00 0.00 0.00 2.92
286 287 6.646653 CCATACATACACACATACACTCATCC 59.353 42.308 0.00 0.00 0.00 3.51
287 288 5.023533 ACATACACACATACACTCATCCC 57.976 43.478 0.00 0.00 0.00 3.85
288 289 4.716784 ACATACACACATACACTCATCCCT 59.283 41.667 0.00 0.00 0.00 4.20
289 290 5.897250 ACATACACACATACACTCATCCCTA 59.103 40.000 0.00 0.00 0.00 3.53
290 291 6.554982 ACATACACACATACACTCATCCCTAT 59.445 38.462 0.00 0.00 0.00 2.57
291 292 5.282055 ACACACATACACTCATCCCTATG 57.718 43.478 0.00 0.00 0.00 2.23
292 293 4.962362 ACACACATACACTCATCCCTATGA 59.038 41.667 0.00 0.00 39.87 2.15
293 294 5.425217 ACACACATACACTCATCCCTATGAA 59.575 40.000 0.00 0.00 41.57 2.57
294 295 5.755375 CACACATACACTCATCCCTATGAAC 59.245 44.000 0.00 0.00 41.57 3.18
295 296 4.984785 CACATACACTCATCCCTATGAACG 59.015 45.833 0.00 0.00 41.57 3.95
296 297 2.604046 ACACTCATCCCTATGAACGC 57.396 50.000 0.00 0.00 41.57 4.84
297 298 1.831106 ACACTCATCCCTATGAACGCA 59.169 47.619 0.00 0.00 41.57 5.24
298 299 2.205074 CACTCATCCCTATGAACGCAC 58.795 52.381 0.00 0.00 41.57 5.34
299 300 1.202417 ACTCATCCCTATGAACGCACG 60.202 52.381 0.00 0.00 41.57 5.34
300 301 0.529773 TCATCCCTATGAACGCACGC 60.530 55.000 0.00 0.00 39.20 5.34
301 302 0.809636 CATCCCTATGAACGCACGCA 60.810 55.000 0.00 0.00 34.84 5.24
302 303 0.106708 ATCCCTATGAACGCACGCAT 59.893 50.000 0.00 0.00 0.00 4.73
303 304 0.747852 TCCCTATGAACGCACGCATA 59.252 50.000 0.00 0.00 0.00 3.14
304 305 0.859232 CCCTATGAACGCACGCATAC 59.141 55.000 0.00 0.00 0.00 2.39
305 306 1.566404 CCTATGAACGCACGCATACA 58.434 50.000 0.00 0.00 0.00 2.29
306 307 1.257936 CCTATGAACGCACGCATACAC 59.742 52.381 0.00 0.00 0.00 2.90
307 308 1.923864 CTATGAACGCACGCATACACA 59.076 47.619 0.00 0.00 0.00 3.72
308 309 0.442310 ATGAACGCACGCATACACAC 59.558 50.000 0.00 0.00 0.00 3.82
309 310 1.131826 GAACGCACGCATACACACC 59.868 57.895 0.00 0.00 0.00 4.16
310 311 2.235536 GAACGCACGCATACACACCC 62.236 60.000 0.00 0.00 0.00 4.61
311 312 2.434185 CGCACGCATACACACCCT 60.434 61.111 0.00 0.00 0.00 4.34
312 313 1.153726 CGCACGCATACACACCCTA 60.154 57.895 0.00 0.00 0.00 3.53
313 314 1.418342 CGCACGCATACACACCCTAC 61.418 60.000 0.00 0.00 0.00 3.18
314 315 1.087771 GCACGCATACACACCCTACC 61.088 60.000 0.00 0.00 0.00 3.18
315 316 0.461339 CACGCATACACACCCTACCC 60.461 60.000 0.00 0.00 0.00 3.69
316 317 0.616679 ACGCATACACACCCTACCCT 60.617 55.000 0.00 0.00 0.00 4.34
317 318 0.539986 CGCATACACACCCTACCCTT 59.460 55.000 0.00 0.00 0.00 3.95
318 319 1.758280 CGCATACACACCCTACCCTTA 59.242 52.381 0.00 0.00 0.00 2.69
319 320 2.367567 CGCATACACACCCTACCCTTAT 59.632 50.000 0.00 0.00 0.00 1.73
320 321 3.740115 GCATACACACCCTACCCTTATG 58.260 50.000 0.00 0.00 0.00 1.90
321 322 3.389983 GCATACACACCCTACCCTTATGA 59.610 47.826 0.00 0.00 0.00 2.15
322 323 4.141574 GCATACACACCCTACCCTTATGAA 60.142 45.833 0.00 0.00 0.00 2.57
323 324 3.994931 ACACACCCTACCCTTATGAAC 57.005 47.619 0.00 0.00 0.00 3.18
324 325 3.253220 ACACACCCTACCCTTATGAACA 58.747 45.455 0.00 0.00 0.00 3.18
325 326 3.850173 ACACACCCTACCCTTATGAACAT 59.150 43.478 0.00 0.00 0.00 2.71
326 327 4.080526 ACACACCCTACCCTTATGAACATC 60.081 45.833 0.00 0.00 0.00 3.06
327 328 4.164221 CACACCCTACCCTTATGAACATCT 59.836 45.833 0.00 0.00 0.00 2.90
328 329 4.409247 ACACCCTACCCTTATGAACATCTC 59.591 45.833 0.00 0.00 0.00 2.75
329 330 3.974642 ACCCTACCCTTATGAACATCTCC 59.025 47.826 0.00 0.00 0.00 3.71
330 331 3.973973 CCCTACCCTTATGAACATCTCCA 59.026 47.826 0.00 0.00 0.00 3.86
331 332 4.412199 CCCTACCCTTATGAACATCTCCAA 59.588 45.833 0.00 0.00 0.00 3.53
332 333 5.455326 CCCTACCCTTATGAACATCTCCAAG 60.455 48.000 0.00 0.00 0.00 3.61
333 334 5.366768 CCTACCCTTATGAACATCTCCAAGA 59.633 44.000 0.00 0.00 0.00 3.02
334 335 5.779241 ACCCTTATGAACATCTCCAAGAA 57.221 39.130 0.00 0.00 0.00 2.52
335 336 6.139679 ACCCTTATGAACATCTCCAAGAAA 57.860 37.500 0.00 0.00 0.00 2.52
336 337 5.946377 ACCCTTATGAACATCTCCAAGAAAC 59.054 40.000 0.00 0.00 0.00 2.78
337 338 6.183347 CCCTTATGAACATCTCCAAGAAACT 58.817 40.000 0.00 0.00 0.00 2.66
338 339 6.094603 CCCTTATGAACATCTCCAAGAAACTG 59.905 42.308 0.00 0.00 0.00 3.16
339 340 6.881065 CCTTATGAACATCTCCAAGAAACTGA 59.119 38.462 0.00 0.00 0.00 3.41
340 341 7.065563 CCTTATGAACATCTCCAAGAAACTGAG 59.934 40.741 0.00 0.00 0.00 3.35
341 342 4.067896 TGAACATCTCCAAGAAACTGAGC 58.932 43.478 0.00 0.00 0.00 4.26
342 343 3.064900 ACATCTCCAAGAAACTGAGCC 57.935 47.619 0.00 0.00 0.00 4.70
343 344 2.373169 ACATCTCCAAGAAACTGAGCCA 59.627 45.455 0.00 0.00 0.00 4.75
344 345 2.847327 TCTCCAAGAAACTGAGCCAG 57.153 50.000 1.16 1.16 37.52 4.85
350 351 2.283145 AGAAACTGAGCCAGCACATT 57.717 45.000 2.50 0.00 34.37 2.71
358 359 3.538591 TGAGCCAGCACATTATCTTGAG 58.461 45.455 0.00 0.00 0.00 3.02
361 362 3.199508 AGCCAGCACATTATCTTGAGAGT 59.800 43.478 0.00 0.00 0.00 3.24
363 364 5.104776 AGCCAGCACATTATCTTGAGAGTAA 60.105 40.000 0.00 0.00 0.00 2.24
370 371 7.128331 CACATTATCTTGAGAGTAAAATGCGG 58.872 38.462 0.00 0.00 0.00 5.69
387 388 1.135689 GCGGGCAACAATGTAAGTCTG 60.136 52.381 0.00 0.00 39.74 3.51
392 393 3.412386 GCAACAATGTAAGTCTGGGACT 58.588 45.455 0.00 0.00 45.64 3.85
406 407 0.605589 GGGACTTTGAACTCCGGTGG 60.606 60.000 8.63 2.00 0.00 4.61
407 408 0.395312 GGACTTTGAACTCCGGTGGA 59.605 55.000 8.63 0.00 0.00 4.02
412 413 1.764571 TTGAACTCCGGTGGACAGGG 61.765 60.000 8.63 0.00 0.00 4.45
417 418 0.471971 CTCCGGTGGACAGGGGATAT 60.472 60.000 0.00 0.00 33.14 1.63
419 420 0.762842 CCGGTGGACAGGGGATATCA 60.763 60.000 4.83 0.00 0.00 2.15
420 421 0.681733 CGGTGGACAGGGGATATCAG 59.318 60.000 4.83 0.00 0.00 2.90
421 422 1.757764 CGGTGGACAGGGGATATCAGA 60.758 57.143 4.83 0.00 0.00 3.27
422 423 1.974236 GGTGGACAGGGGATATCAGAG 59.026 57.143 4.83 0.00 0.00 3.35
433 434 4.202738 GGGGATATCAGAGTCCTCCTAACT 60.203 50.000 4.83 0.00 34.84 2.24
445 446 4.409247 GTCCTCCTAACTATCCAACCACAT 59.591 45.833 0.00 0.00 0.00 3.21
446 447 4.408921 TCCTCCTAACTATCCAACCACATG 59.591 45.833 0.00 0.00 0.00 3.21
458 459 3.928769 CACATGATGGTCGCGCCG 61.929 66.667 0.00 0.00 41.21 6.46
470 471 0.668096 TCGCGCCGTAGAACATTGTT 60.668 50.000 0.00 0.63 0.00 2.83
1077 1093 4.785453 CGGCCCTGTCTTGCCTCC 62.785 72.222 0.00 0.00 45.71 4.30
1142 1158 5.049680 CGTATTCTGTTGTTGTAGCCTTTGT 60.050 40.000 0.00 0.00 0.00 2.83
1148 1164 5.194432 TGTTGTTGTAGCCTTTGTTTCCTA 58.806 37.500 0.00 0.00 0.00 2.94
1149 1165 5.652891 TGTTGTTGTAGCCTTTGTTTCCTAA 59.347 36.000 0.00 0.00 0.00 2.69
1150 1166 6.322712 TGTTGTTGTAGCCTTTGTTTCCTAAT 59.677 34.615 0.00 0.00 0.00 1.73
1151 1167 7.502895 TGTTGTTGTAGCCTTTGTTTCCTAATA 59.497 33.333 0.00 0.00 0.00 0.98
1223 1239 0.321122 AGTGCTGAGTGTTAGCTGCC 60.321 55.000 0.00 0.00 41.66 4.85
1362 1378 6.669125 TTCATGGTCATGGAGTTGAAATTT 57.331 33.333 10.61 0.00 39.24 1.82
1383 1399 1.352083 GCCCTAGCCTGACATCCATA 58.648 55.000 0.00 0.00 0.00 2.74
1491 1507 8.462143 AGTAAGTGTTGTGTACTATTTGATCG 57.538 34.615 0.00 0.00 0.00 3.69
1494 1510 7.347508 AGTGTTGTGTACTATTTGATCGTTC 57.652 36.000 0.00 0.00 0.00 3.95
1499 1515 5.231357 TGTGTACTATTTGATCGTTCATCGC 59.769 40.000 0.00 0.00 39.67 4.58
1550 1566 6.599356 TCTTACTTTGCTGTACATGGTCTA 57.401 37.500 0.00 0.00 0.00 2.59
1661 1677 8.510243 TCTTGTGATGTGCATCTAAATTATGT 57.490 30.769 12.64 0.00 38.60 2.29
1684 1700 9.877178 ATGTTGTTTGTCTTGTTAATTTAACCA 57.123 25.926 14.99 5.13 37.88 3.67
1751 1767 6.606796 ACCATATTGATACATGGCTTGTTTGA 59.393 34.615 11.53 0.00 44.74 2.69
1777 1793 4.457257 ACTTATTTCTTCAGTTGCAGCTCC 59.543 41.667 0.00 0.00 0.00 4.70
1860 5662 9.383519 CACCTGATGTTAGTATATTTTGTGTCT 57.616 33.333 0.00 0.00 0.00 3.41
1885 5687 7.921041 AGATTCAGATGGTCCTCAAATAGTA 57.079 36.000 0.00 0.00 0.00 1.82
1916 5722 4.194640 TGCTAGATGATTTTGGCTGTCTC 58.805 43.478 0.00 0.00 0.00 3.36
1980 5786 3.426159 CCTTTGATGTGGCGTATGACAAC 60.426 47.826 0.00 0.00 32.32 3.32
2069 5875 0.820871 TTTGATGCCCCCATTTACGC 59.179 50.000 0.00 0.00 0.00 4.42
2090 5896 4.614946 GCTTTGGCCTTTCTATATGCTTG 58.385 43.478 3.32 0.00 0.00 4.01
2128 5934 2.341846 TTCCCGAATGTATGAAGGGC 57.658 50.000 0.00 0.00 41.76 5.19
2248 6054 7.087409 TGTGGTATGCTCATGTTTATTCAAG 57.913 36.000 0.00 0.00 0.00 3.02
2300 6106 7.678194 TTCGTTGTTTTGAATTTCTCATGTC 57.322 32.000 0.00 0.00 32.78 3.06
2394 6200 6.755206 TGTGATGGTAGCATATGTAAGGTAC 58.245 40.000 7.54 0.00 37.84 3.34
2418 6224 2.307496 TGTGGGACATGGAAATGCTT 57.693 45.000 0.00 0.00 44.52 3.91
2458 6264 9.565213 GTGAAATTGAGGAAATCTGAACATTAG 57.435 33.333 0.00 0.00 0.00 1.73
2567 6373 7.883217 AGGATATTTTGAGATATTGCTTGCTG 58.117 34.615 0.00 0.00 0.00 4.41
2651 6457 1.898574 CGCTATGGCATGGGGAACC 60.899 63.158 20.91 0.00 45.52 3.62
2746 6552 7.869016 TCTGTCTTTATCACGAAACTTGTAG 57.131 36.000 0.00 0.00 0.00 2.74
2852 6658 5.392380 GCTCATAACCTGTTCCAAATGTCTG 60.392 44.000 0.00 0.00 0.00 3.51
2853 6659 4.458989 TCATAACCTGTTCCAAATGTCTGC 59.541 41.667 0.00 0.00 0.00 4.26
2873 6681 2.201732 CGAATATAGGCGTGTGCACTT 58.798 47.619 19.41 0.00 45.35 3.16
2947 6755 6.314917 ACAGGTTGAGAAAATATTTGGTCCT 58.685 36.000 0.39 2.38 0.00 3.85
3412 7220 6.115448 AGTCAGGTTGTTCTAGTTATTGCT 57.885 37.500 0.00 0.00 0.00 3.91
3582 7390 0.397957 TCCTTCCTATACCGCCTGCA 60.398 55.000 0.00 0.00 0.00 4.41
3592 7400 2.360350 CGCCTGCACCTGGTTCAT 60.360 61.111 0.00 0.00 0.00 2.57
3594 7402 2.401766 GCCTGCACCTGGTTCATCG 61.402 63.158 0.00 0.00 0.00 3.84
3599 7407 1.026182 GCACCTGGTTCATCGATGCA 61.026 55.000 20.81 7.16 0.00 3.96
3603 7411 0.935898 CTGGTTCATCGATGCAGCTC 59.064 55.000 23.90 11.36 0.00 4.09
3605 7413 0.807667 GGTTCATCGATGCAGCTCGT 60.808 55.000 20.81 0.00 39.62 4.18
3608 7416 1.001624 TCATCGATGCAGCTCGTTTG 58.998 50.000 20.81 8.72 39.62 2.93
3609 7417 0.588233 CATCGATGCAGCTCGTTTGC 60.588 55.000 13.37 2.43 41.86 3.68
3610 7418 2.028766 ATCGATGCAGCTCGTTTGCG 62.029 55.000 9.37 0.00 44.40 4.85
3611 7419 2.729675 CGATGCAGCTCGTTTGCGA 61.730 57.895 0.00 0.00 44.40 5.10
3612 7420 1.717937 GATGCAGCTCGTTTGCGAT 59.282 52.632 0.00 0.93 46.80 4.58
3613 7421 0.588233 GATGCAGCTCGTTTGCGATG 60.588 55.000 0.00 0.00 46.80 3.84
3614 7422 2.575262 GCAGCTCGTTTGCGATGC 60.575 61.111 0.00 0.92 46.80 3.91
3672 7484 3.994392 TGCTTGCTTCTAAAAGGAGTACG 59.006 43.478 0.00 0.00 34.04 3.67
3774 7586 0.541998 CCCCTGTTTGTCCCCCTTTC 60.542 60.000 0.00 0.00 0.00 2.62
3825 7637 5.171147 CTCCTGAGCATTTGATCATCAAC 57.829 43.478 0.00 0.00 39.93 3.18
3864 7676 0.387565 GGGAGGAGCTCATCGAGAAC 59.612 60.000 21.14 7.58 31.08 3.01
3877 7689 0.384309 CGAGAACGCAGGTAGGCATA 59.616 55.000 0.00 0.00 0.00 3.14
3923 7735 5.353956 CCAAACACATCTTGATTCGTATCCA 59.646 40.000 0.00 0.00 0.00 3.41
3959 7771 2.542020 TCGACCTGCTCAATGTTTGA 57.458 45.000 0.00 0.00 38.17 2.69
4225 8037 1.561643 TACCCTCAGACTGCAAGAGG 58.438 55.000 14.14 14.14 46.71 3.69
4256 8068 6.292703 GCCACTGTAACTGTGTAAACTGTTAG 60.293 42.308 14.02 9.12 35.65 2.34
4420 8232 6.985188 TGAATAAACTTGTGAGCATAGTCC 57.015 37.500 0.00 0.00 0.00 3.85
4440 8252 0.588252 CTTGTGCGTTGAGAGTTGGG 59.412 55.000 0.00 0.00 0.00 4.12
4443 8255 1.305201 GTGCGTTGAGAGTTGGGAAA 58.695 50.000 0.00 0.00 0.00 3.13
4444 8256 1.264288 GTGCGTTGAGAGTTGGGAAAG 59.736 52.381 0.00 0.00 0.00 2.62
4445 8257 0.238553 GCGTTGAGAGTTGGGAAAGC 59.761 55.000 0.00 0.00 0.00 3.51
4446 8258 1.884235 CGTTGAGAGTTGGGAAAGCT 58.116 50.000 0.00 0.00 0.00 3.74
4447 8259 1.532868 CGTTGAGAGTTGGGAAAGCTG 59.467 52.381 0.00 0.00 0.00 4.24
4449 8261 2.952310 GTTGAGAGTTGGGAAAGCTGTT 59.048 45.455 0.00 0.00 0.00 3.16
4450 8262 2.575532 TGAGAGTTGGGAAAGCTGTTG 58.424 47.619 0.00 0.00 0.00 3.33
4451 8263 1.268079 GAGAGTTGGGAAAGCTGTTGC 59.732 52.381 0.00 0.00 40.05 4.17
4490 8398 0.965439 CATCGATGAGAGAGGTCCCC 59.035 60.000 21.02 0.00 0.00 4.81
4491 8399 0.178947 ATCGATGAGAGAGGTCCCCC 60.179 60.000 0.00 0.00 0.00 5.40
4502 8410 1.611556 GGTCCCCCGGAACTGTAGT 60.612 63.158 0.73 0.00 36.31 2.73
4507 8415 1.140252 CCCCCGGAACTGTAGTATTGG 59.860 57.143 0.73 0.00 0.00 3.16
4548 8456 1.875576 GCAGCTGATTATGGGACCTCG 60.876 57.143 20.43 0.00 0.00 4.63
4593 8501 4.634199 AGCCAAAAACATGGTTCATCTTG 58.366 39.130 0.00 0.00 42.75 3.02
4631 8539 0.390866 AACATCTCAGGCTCGCTGTG 60.391 55.000 0.00 0.00 0.00 3.66
4632 8540 2.172372 CATCTCAGGCTCGCTGTGC 61.172 63.158 0.00 0.00 0.00 4.57
4633 8541 2.653087 ATCTCAGGCTCGCTGTGCA 61.653 57.895 0.00 0.00 0.00 4.57
4634 8542 2.575125 ATCTCAGGCTCGCTGTGCAG 62.575 60.000 0.00 0.00 0.00 4.41
4653 8561 2.091112 CGCTGTCGTGCTGGAGAAG 61.091 63.158 0.00 0.00 0.00 2.85
4668 8576 2.619590 GGAGAAGAGAAGAGGTCCTCGT 60.620 54.545 13.41 10.38 35.36 4.18
4674 8582 2.559231 GAGAAGAGGTCCTCGTTGACTT 59.441 50.000 13.41 0.79 35.36 3.01
4678 8586 0.314302 AGGTCCTCGTTGACTTCACG 59.686 55.000 6.95 0.00 35.54 4.35
4705 8613 6.851222 AAGATACTGCATTTTCATACTCGG 57.149 37.500 0.00 0.00 0.00 4.63
4714 8622 5.234543 GCATTTTCATACTCGGTTCCTAGAC 59.765 44.000 0.00 0.00 0.00 2.59
4727 8635 3.985019 TCCTAGACGCCAAATTTACCA 57.015 42.857 0.00 0.00 0.00 3.25
4741 8649 1.272807 TTACCAGAACCTTCTCCCGG 58.727 55.000 0.00 0.00 34.74 5.73
4747 8655 2.166664 CAGAACCTTCTCCCGGAACTAG 59.833 54.545 0.73 0.00 34.74 2.57
4753 8661 4.254492 CCTTCTCCCGGAACTAGAAAAAG 58.746 47.826 0.73 0.00 0.00 2.27
4754 8662 4.262938 CCTTCTCCCGGAACTAGAAAAAGT 60.263 45.833 0.73 0.00 0.00 2.66
4756 8664 5.397142 TCTCCCGGAACTAGAAAAAGTAC 57.603 43.478 0.73 0.00 0.00 2.73
4757 8665 4.834496 TCTCCCGGAACTAGAAAAAGTACA 59.166 41.667 0.73 0.00 0.00 2.90
4758 8666 5.047519 TCTCCCGGAACTAGAAAAAGTACAG 60.048 44.000 0.73 0.00 0.00 2.74
4759 8667 4.834496 TCCCGGAACTAGAAAAAGTACAGA 59.166 41.667 0.73 0.00 0.00 3.41
4760 8668 5.305128 TCCCGGAACTAGAAAAAGTACAGAA 59.695 40.000 0.73 0.00 0.00 3.02
4761 8669 5.638234 CCCGGAACTAGAAAAAGTACAGAAG 59.362 44.000 0.73 0.00 0.00 2.85
4762 8670 5.120363 CCGGAACTAGAAAAAGTACAGAAGC 59.880 44.000 0.00 0.00 0.00 3.86
4763 8671 5.120363 CGGAACTAGAAAAAGTACAGAAGCC 59.880 44.000 0.00 0.00 0.00 4.35
4764 8672 6.231951 GGAACTAGAAAAAGTACAGAAGCCT 58.768 40.000 0.00 0.00 0.00 4.58
4765 8673 7.384477 GGAACTAGAAAAAGTACAGAAGCCTA 58.616 38.462 0.00 0.00 0.00 3.93
4766 8674 7.876582 GGAACTAGAAAAAGTACAGAAGCCTAA 59.123 37.037 0.00 0.00 0.00 2.69
4767 8675 8.834749 AACTAGAAAAAGTACAGAAGCCTAAG 57.165 34.615 0.00 0.00 0.00 2.18
4768 8676 7.964624 ACTAGAAAAAGTACAGAAGCCTAAGT 58.035 34.615 0.00 0.00 0.00 2.24
4769 8677 8.430431 ACTAGAAAAAGTACAGAAGCCTAAGTT 58.570 33.333 0.00 0.00 0.00 2.66
4770 8678 9.274206 CTAGAAAAAGTACAGAAGCCTAAGTTT 57.726 33.333 0.00 0.00 0.00 2.66
4771 8679 8.521170 AGAAAAAGTACAGAAGCCTAAGTTTT 57.479 30.769 0.00 0.00 0.00 2.43
4772 8680 8.967918 AGAAAAAGTACAGAAGCCTAAGTTTTT 58.032 29.630 0.00 0.00 35.28 1.94
4799 8707 4.020485 GTGAGGGAACAGAAGCCTAAGTTA 60.020 45.833 0.00 0.00 0.00 2.24
4863 8776 1.550976 GGTGAGGTACAAGGAGGAGTG 59.449 57.143 0.00 0.00 0.00 3.51
5003 8918 0.732880 AGCAGTGTCGTACGCACATC 60.733 55.000 30.36 23.59 39.17 3.06
5011 8926 1.059979 TCGTACGCACATCATTTTCGC 59.940 47.619 11.24 0.00 0.00 4.70
5043 8958 1.870016 GTTCGGCGCTCTTCTCTCG 60.870 63.158 7.64 0.00 0.00 4.04
5050 8965 1.596954 GCGCTCTTCTCTCGCTTCTAG 60.597 57.143 0.00 0.00 44.79 2.43
5068 8983 3.913799 TCTAGGTTCCCTTGGACATGAAA 59.086 43.478 0.00 0.00 34.61 2.69
5093 9008 4.514781 TGGACTCAAACGGGATATATCG 57.485 45.455 6.64 0.00 0.00 2.92
5106 9021 3.617263 GGATATATCGGATGTCAAACGGC 59.383 47.826 6.64 0.00 0.00 5.68
5108 9023 1.934589 TATCGGATGTCAAACGGCAG 58.065 50.000 0.00 0.00 0.00 4.85
5109 9024 0.744414 ATCGGATGTCAAACGGCAGG 60.744 55.000 0.00 0.00 0.00 4.85
5110 9025 2.877691 GGATGTCAAACGGCAGGC 59.122 61.111 0.00 0.00 0.00 4.85
5131 9076 1.438651 TGGTCGAAAATTCAGAGGCG 58.561 50.000 0.00 0.00 0.00 5.52
5149 9094 2.433446 CAAGCTCAGTGGTGGCCT 59.567 61.111 3.32 0.00 0.00 5.19
5152 9097 3.640407 GCTCAGTGGTGGCCTGGA 61.640 66.667 3.32 0.00 0.00 3.86
5177 9122 5.255397 TCCATGACTTCAGGGTGTTTAAT 57.745 39.130 9.64 0.00 46.97 1.40
5181 9126 6.884295 CCATGACTTCAGGGTGTTTAATTAGA 59.116 38.462 1.59 0.00 42.43 2.10
5192 9137 5.705905 GGTGTTTAATTAGACTCTGTTGGCT 59.294 40.000 7.57 0.00 0.00 4.75
5194 9139 5.637810 TGTTTAATTAGACTCTGTTGGCTCG 59.362 40.000 7.57 0.00 0.00 5.03
5198 9143 1.739562 GACTCTGTTGGCTCGGCAG 60.740 63.158 0.00 0.00 0.00 4.85
5203 9148 3.435186 GTTGGCTCGGCAGGCTTC 61.435 66.667 10.73 0.00 45.75 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.122048 CCCTCTCTCTTTCCCATAGAAAATTT 58.878 38.462 0.00 0.00 43.84 1.82
1 2 6.218522 ACCCTCTCTCTTTCCCATAGAAAATT 59.781 38.462 0.00 0.00 43.84 1.82
2 3 5.733647 ACCCTCTCTCTTTCCCATAGAAAAT 59.266 40.000 0.00 0.00 43.84 1.82
3 4 5.101529 ACCCTCTCTCTTTCCCATAGAAAA 58.898 41.667 0.00 0.00 43.84 2.29
4 5 4.699994 ACCCTCTCTCTTTCCCATAGAAA 58.300 43.478 0.00 0.00 42.28 2.52
5 6 4.264850 TGACCCTCTCTCTTTCCCATAGAA 60.265 45.833 0.00 0.00 0.00 2.10
6 7 3.272285 TGACCCTCTCTCTTTCCCATAGA 59.728 47.826 0.00 0.00 0.00 1.98
7 8 3.647636 TGACCCTCTCTCTTTCCCATAG 58.352 50.000 0.00 0.00 0.00 2.23
8 9 3.776731 TGACCCTCTCTCTTTCCCATA 57.223 47.619 0.00 0.00 0.00 2.74
9 10 2.649742 TGACCCTCTCTCTTTCCCAT 57.350 50.000 0.00 0.00 0.00 4.00
10 11 2.573462 CAATGACCCTCTCTCTTTCCCA 59.427 50.000 0.00 0.00 0.00 4.37
11 12 2.092699 CCAATGACCCTCTCTCTTTCCC 60.093 54.545 0.00 0.00 0.00 3.97
12 13 2.573915 ACCAATGACCCTCTCTCTTTCC 59.426 50.000 0.00 0.00 0.00 3.13
13 14 3.990959 ACCAATGACCCTCTCTCTTTC 57.009 47.619 0.00 0.00 0.00 2.62
14 15 3.652869 TCAACCAATGACCCTCTCTCTTT 59.347 43.478 0.00 0.00 31.50 2.52
15 16 3.251484 TCAACCAATGACCCTCTCTCTT 58.749 45.455 0.00 0.00 31.50 2.85
16 17 2.907892 TCAACCAATGACCCTCTCTCT 58.092 47.619 0.00 0.00 31.50 3.10
17 18 3.054802 ACATCAACCAATGACCCTCTCTC 60.055 47.826 0.00 0.00 41.93 3.20
18 19 2.915604 ACATCAACCAATGACCCTCTCT 59.084 45.455 0.00 0.00 41.93 3.10
19 20 3.274288 GACATCAACCAATGACCCTCTC 58.726 50.000 0.00 0.00 41.93 3.20
20 21 2.025887 GGACATCAACCAATGACCCTCT 60.026 50.000 0.00 0.00 41.93 3.69
21 22 2.290896 TGGACATCAACCAATGACCCTC 60.291 50.000 3.57 0.00 41.93 4.30
22 23 1.710244 TGGACATCAACCAATGACCCT 59.290 47.619 3.57 0.00 41.93 4.34
23 24 2.094675 CTGGACATCAACCAATGACCC 58.905 52.381 3.57 0.00 41.93 4.46
24 25 2.094675 CCTGGACATCAACCAATGACC 58.905 52.381 0.00 0.00 41.93 4.02
25 26 3.012518 CTCCTGGACATCAACCAATGAC 58.987 50.000 0.00 0.00 41.93 3.06
26 27 2.644299 ACTCCTGGACATCAACCAATGA 59.356 45.455 0.00 0.00 43.67 2.57
27 28 3.077484 ACTCCTGGACATCAACCAATG 57.923 47.619 0.00 0.00 36.95 2.82
28 29 5.905331 TCTATACTCCTGGACATCAACCAAT 59.095 40.000 0.00 0.00 36.95 3.16
29 30 5.277250 TCTATACTCCTGGACATCAACCAA 58.723 41.667 0.00 0.00 36.95 3.67
30 31 4.878968 TCTATACTCCTGGACATCAACCA 58.121 43.478 0.00 0.00 35.96 3.67
31 32 7.540474 TTATCTATACTCCTGGACATCAACC 57.460 40.000 0.00 0.00 0.00 3.77
32 33 9.646427 GATTTATCTATACTCCTGGACATCAAC 57.354 37.037 0.00 0.00 0.00 3.18
33 34 9.379770 TGATTTATCTATACTCCTGGACATCAA 57.620 33.333 0.00 0.00 0.00 2.57
34 35 8.956446 TGATTTATCTATACTCCTGGACATCA 57.044 34.615 0.00 0.00 0.00 3.07
35 36 9.814899 CATGATTTATCTATACTCCTGGACATC 57.185 37.037 0.00 0.00 0.00 3.06
36 37 9.331466 ACATGATTTATCTATACTCCTGGACAT 57.669 33.333 0.00 0.00 0.00 3.06
37 38 8.727100 ACATGATTTATCTATACTCCTGGACA 57.273 34.615 0.00 0.00 0.00 4.02
38 39 9.646427 GAACATGATTTATCTATACTCCTGGAC 57.354 37.037 0.00 0.00 0.00 4.02
39 40 9.607333 AGAACATGATTTATCTATACTCCTGGA 57.393 33.333 0.00 0.00 0.00 3.86
57 58 9.300681 AGACTCCAAATGATTAAAAGAACATGA 57.699 29.630 0.00 0.00 0.00 3.07
58 59 9.350357 CAGACTCCAAATGATTAAAAGAACATG 57.650 33.333 0.00 0.00 0.00 3.21
59 60 8.526147 CCAGACTCCAAATGATTAAAAGAACAT 58.474 33.333 0.00 0.00 0.00 2.71
60 61 7.505585 ACCAGACTCCAAATGATTAAAAGAACA 59.494 33.333 0.00 0.00 0.00 3.18
61 62 7.886338 ACCAGACTCCAAATGATTAAAAGAAC 58.114 34.615 0.00 0.00 0.00 3.01
62 63 9.581289 TTACCAGACTCCAAATGATTAAAAGAA 57.419 29.630 0.00 0.00 0.00 2.52
63 64 9.581289 TTTACCAGACTCCAAATGATTAAAAGA 57.419 29.630 0.00 0.00 0.00 2.52
64 65 9.626045 GTTTACCAGACTCCAAATGATTAAAAG 57.374 33.333 0.00 0.00 0.00 2.27
65 66 9.362151 AGTTTACCAGACTCCAAATGATTAAAA 57.638 29.630 0.00 0.00 0.00 1.52
66 67 8.934023 AGTTTACCAGACTCCAAATGATTAAA 57.066 30.769 0.00 0.00 0.00 1.52
67 68 8.934023 AAGTTTACCAGACTCCAAATGATTAA 57.066 30.769 0.00 0.00 0.00 1.40
68 69 8.792633 CAAAGTTTACCAGACTCCAAATGATTA 58.207 33.333 0.00 0.00 0.00 1.75
69 70 7.287696 ACAAAGTTTACCAGACTCCAAATGATT 59.712 33.333 0.00 0.00 0.00 2.57
70 71 6.777580 ACAAAGTTTACCAGACTCCAAATGAT 59.222 34.615 0.00 0.00 0.00 2.45
71 72 6.039270 CACAAAGTTTACCAGACTCCAAATGA 59.961 38.462 0.00 0.00 0.00 2.57
72 73 6.039270 TCACAAAGTTTACCAGACTCCAAATG 59.961 38.462 0.00 0.00 0.00 2.32
73 74 6.126409 TCACAAAGTTTACCAGACTCCAAAT 58.874 36.000 0.00 0.00 0.00 2.32
74 75 5.502079 TCACAAAGTTTACCAGACTCCAAA 58.498 37.500 0.00 0.00 0.00 3.28
75 76 5.104693 TCTCACAAAGTTTACCAGACTCCAA 60.105 40.000 0.00 0.00 0.00 3.53
76 77 4.407621 TCTCACAAAGTTTACCAGACTCCA 59.592 41.667 0.00 0.00 0.00 3.86
77 78 4.957296 TCTCACAAAGTTTACCAGACTCC 58.043 43.478 0.00 0.00 0.00 3.85
78 79 6.920569 TTTCTCACAAAGTTTACCAGACTC 57.079 37.500 0.00 0.00 0.00 3.36
79 80 7.696992 TTTTTCTCACAAAGTTTACCAGACT 57.303 32.000 0.00 0.00 0.00 3.24
114 115 9.981114 CCTATTTGAAACAAGTTTTGGTAGAAT 57.019 29.630 0.00 0.00 32.11 2.40
115 116 8.417884 CCCTATTTGAAACAAGTTTTGGTAGAA 58.582 33.333 0.00 0.00 32.11 2.10
116 117 7.562088 ACCCTATTTGAAACAAGTTTTGGTAGA 59.438 33.333 0.00 0.00 32.11 2.59
117 118 7.722363 ACCCTATTTGAAACAAGTTTTGGTAG 58.278 34.615 0.00 1.93 32.11 3.18
118 119 7.663043 ACCCTATTTGAAACAAGTTTTGGTA 57.337 32.000 0.00 0.00 32.11 3.25
119 120 6.553953 ACCCTATTTGAAACAAGTTTTGGT 57.446 33.333 0.00 0.00 32.11 3.67
120 121 9.554395 AATTACCCTATTTGAAACAAGTTTTGG 57.446 29.630 0.00 0.00 32.11 3.28
146 147 4.688413 GGTATTTTGGCATCTTCGCAAAAA 59.312 37.500 1.01 1.01 46.14 1.94
147 148 4.241681 GGTATTTTGGCATCTTCGCAAAA 58.758 39.130 0.00 0.00 32.92 2.44
148 149 3.367910 GGGTATTTTGGCATCTTCGCAAA 60.368 43.478 0.00 0.00 0.00 3.68
149 150 2.165437 GGGTATTTTGGCATCTTCGCAA 59.835 45.455 0.00 0.00 0.00 4.85
150 151 1.748493 GGGTATTTTGGCATCTTCGCA 59.252 47.619 0.00 0.00 0.00 5.10
151 152 2.024414 AGGGTATTTTGGCATCTTCGC 58.976 47.619 0.00 0.00 0.00 4.70
152 153 5.449999 GGTTTAGGGTATTTTGGCATCTTCG 60.450 44.000 0.00 0.00 0.00 3.79
153 154 5.656859 AGGTTTAGGGTATTTTGGCATCTTC 59.343 40.000 0.00 0.00 0.00 2.87
154 155 5.589831 AGGTTTAGGGTATTTTGGCATCTT 58.410 37.500 0.00 0.00 0.00 2.40
155 156 5.206905 AGGTTTAGGGTATTTTGGCATCT 57.793 39.130 0.00 0.00 0.00 2.90
156 157 6.262496 GTCTAGGTTTAGGGTATTTTGGCATC 59.738 42.308 0.00 0.00 0.00 3.91
157 158 6.127101 GTCTAGGTTTAGGGTATTTTGGCAT 58.873 40.000 0.00 0.00 0.00 4.40
158 159 5.503002 GTCTAGGTTTAGGGTATTTTGGCA 58.497 41.667 0.00 0.00 0.00 4.92
159 160 4.885907 GGTCTAGGTTTAGGGTATTTTGGC 59.114 45.833 0.00 0.00 0.00 4.52
160 161 5.121105 CGGTCTAGGTTTAGGGTATTTTGG 58.879 45.833 0.00 0.00 0.00 3.28
161 162 5.737860 ACGGTCTAGGTTTAGGGTATTTTG 58.262 41.667 0.00 0.00 0.00 2.44
162 163 7.681259 ATACGGTCTAGGTTTAGGGTATTTT 57.319 36.000 0.00 0.00 0.00 1.82
163 164 8.962912 ATATACGGTCTAGGTTTAGGGTATTT 57.037 34.615 0.00 0.00 0.00 1.40
164 165 8.810041 CAATATACGGTCTAGGTTTAGGGTATT 58.190 37.037 0.00 0.00 0.00 1.89
165 166 7.952368 ACAATATACGGTCTAGGTTTAGGGTAT 59.048 37.037 0.00 0.00 0.00 2.73
166 167 7.231317 CACAATATACGGTCTAGGTTTAGGGTA 59.769 40.741 0.00 0.00 0.00 3.69
167 168 6.041296 CACAATATACGGTCTAGGTTTAGGGT 59.959 42.308 0.00 0.00 0.00 4.34
168 169 6.041296 ACACAATATACGGTCTAGGTTTAGGG 59.959 42.308 0.00 0.00 0.00 3.53
169 170 7.047460 ACACAATATACGGTCTAGGTTTAGG 57.953 40.000 0.00 0.00 0.00 2.69
170 171 7.709947 TGACACAATATACGGTCTAGGTTTAG 58.290 38.462 0.00 0.00 0.00 1.85
171 172 7.643569 TGACACAATATACGGTCTAGGTTTA 57.356 36.000 0.00 0.00 0.00 2.01
172 173 6.534475 TGACACAATATACGGTCTAGGTTT 57.466 37.500 0.00 0.00 0.00 3.27
173 174 6.379133 TCTTGACACAATATACGGTCTAGGTT 59.621 38.462 0.00 0.00 35.05 3.50
174 175 5.889853 TCTTGACACAATATACGGTCTAGGT 59.110 40.000 0.00 0.00 35.05 3.08
175 176 6.387041 TCTTGACACAATATACGGTCTAGG 57.613 41.667 0.00 0.00 35.05 3.02
176 177 9.961265 TTTATCTTGACACAATATACGGTCTAG 57.039 33.333 0.00 0.00 35.43 2.43
177 178 9.740239 GTTTATCTTGACACAATATACGGTCTA 57.260 33.333 0.00 0.00 0.00 2.59
178 179 8.255206 TGTTTATCTTGACACAATATACGGTCT 58.745 33.333 0.00 0.00 0.00 3.85
179 180 8.325997 GTGTTTATCTTGACACAATATACGGTC 58.674 37.037 2.06 0.00 44.20 4.79
180 181 7.279313 GGTGTTTATCTTGACACAATATACGGT 59.721 37.037 8.63 0.00 46.05 4.83
181 182 7.279090 TGGTGTTTATCTTGACACAATATACGG 59.721 37.037 8.63 0.00 46.05 4.02
182 183 8.192068 TGGTGTTTATCTTGACACAATATACG 57.808 34.615 8.63 0.00 46.05 3.06
187 188 9.912634 CTTTTATGGTGTTTATCTTGACACAAT 57.087 29.630 8.63 5.53 46.05 2.71
188 189 8.908903 ACTTTTATGGTGTTTATCTTGACACAA 58.091 29.630 8.63 0.00 46.05 3.33
189 190 8.458573 ACTTTTATGGTGTTTATCTTGACACA 57.541 30.769 8.63 0.00 46.05 3.72
190 191 9.180678 CAACTTTTATGGTGTTTATCTTGACAC 57.819 33.333 0.00 0.00 44.09 3.67
191 192 8.908903 ACAACTTTTATGGTGTTTATCTTGACA 58.091 29.630 0.00 0.00 0.00 3.58
192 193 9.744468 AACAACTTTTATGGTGTTTATCTTGAC 57.256 29.630 0.00 0.00 0.00 3.18
228 229 9.783256 GCATCCGTAGTAAGAAAAACATAATTT 57.217 29.630 0.00 0.00 0.00 1.82
229 230 8.952278 TGCATCCGTAGTAAGAAAAACATAATT 58.048 29.630 0.00 0.00 0.00 1.40
230 231 8.500753 TGCATCCGTAGTAAGAAAAACATAAT 57.499 30.769 0.00 0.00 0.00 1.28
231 232 7.820386 TCTGCATCCGTAGTAAGAAAAACATAA 59.180 33.333 0.00 0.00 0.00 1.90
232 233 7.277098 GTCTGCATCCGTAGTAAGAAAAACATA 59.723 37.037 0.00 0.00 0.00 2.29
233 234 6.092259 GTCTGCATCCGTAGTAAGAAAAACAT 59.908 38.462 0.00 0.00 0.00 2.71
234 235 5.407387 GTCTGCATCCGTAGTAAGAAAAACA 59.593 40.000 0.00 0.00 0.00 2.83
235 236 5.444218 CGTCTGCATCCGTAGTAAGAAAAAC 60.444 44.000 0.00 0.00 0.00 2.43
236 237 4.624024 CGTCTGCATCCGTAGTAAGAAAAA 59.376 41.667 0.00 0.00 0.00 1.94
237 238 4.171005 CGTCTGCATCCGTAGTAAGAAAA 58.829 43.478 0.00 0.00 0.00 2.29
238 239 3.428452 CCGTCTGCATCCGTAGTAAGAAA 60.428 47.826 4.71 0.00 0.00 2.52
239 240 2.098607 CCGTCTGCATCCGTAGTAAGAA 59.901 50.000 4.71 0.00 0.00 2.52
240 241 1.674441 CCGTCTGCATCCGTAGTAAGA 59.326 52.381 4.71 0.00 0.00 2.10
241 242 1.864435 GCCGTCTGCATCCGTAGTAAG 60.864 57.143 4.71 0.00 40.77 2.34
242 243 0.101759 GCCGTCTGCATCCGTAGTAA 59.898 55.000 4.71 0.00 40.77 2.24
243 244 1.731433 GGCCGTCTGCATCCGTAGTA 61.731 60.000 0.00 0.00 43.89 1.82
244 245 2.494918 GCCGTCTGCATCCGTAGT 59.505 61.111 4.71 0.00 40.77 2.73
245 246 2.279517 GGCCGTCTGCATCCGTAG 60.280 66.667 0.00 0.00 43.89 3.51
246 247 1.110518 TATGGCCGTCTGCATCCGTA 61.111 55.000 0.00 0.00 43.89 4.02
247 248 2.431454 TATGGCCGTCTGCATCCGT 61.431 57.895 0.00 0.00 43.89 4.69
248 249 1.956170 GTATGGCCGTCTGCATCCG 60.956 63.158 0.00 0.00 43.89 4.18
249 250 0.250467 ATGTATGGCCGTCTGCATCC 60.250 55.000 0.00 0.00 43.89 3.51
250 251 2.069273 GTATGTATGGCCGTCTGCATC 58.931 52.381 0.00 0.00 43.89 3.91
251 252 1.416030 TGTATGTATGGCCGTCTGCAT 59.584 47.619 0.00 7.75 43.89 3.96
252 253 0.827368 TGTATGTATGGCCGTCTGCA 59.173 50.000 0.00 0.00 43.89 4.41
253 254 1.217882 GTGTATGTATGGCCGTCTGC 58.782 55.000 0.00 0.00 40.16 4.26
254 255 2.201732 GTGTGTATGTATGGCCGTCTG 58.798 52.381 0.00 0.00 0.00 3.51
255 256 1.828595 TGTGTGTATGTATGGCCGTCT 59.171 47.619 0.00 0.00 0.00 4.18
256 257 2.303163 TGTGTGTATGTATGGCCGTC 57.697 50.000 0.00 0.00 0.00 4.79
257 258 3.133183 TGTATGTGTGTATGTATGGCCGT 59.867 43.478 1.35 1.35 0.00 5.68
258 259 3.493129 GTGTATGTGTGTATGTATGGCCG 59.507 47.826 0.00 0.00 0.00 6.13
259 260 4.703897 AGTGTATGTGTGTATGTATGGCC 58.296 43.478 0.00 0.00 0.00 5.36
260 261 5.356426 TGAGTGTATGTGTGTATGTATGGC 58.644 41.667 0.00 0.00 0.00 4.40
261 262 6.646653 GGATGAGTGTATGTGTGTATGTATGG 59.353 42.308 0.00 0.00 0.00 2.74
262 263 6.646653 GGGATGAGTGTATGTGTGTATGTATG 59.353 42.308 0.00 0.00 0.00 2.39
263 264 6.554982 AGGGATGAGTGTATGTGTGTATGTAT 59.445 38.462 0.00 0.00 0.00 2.29
264 265 5.897250 AGGGATGAGTGTATGTGTGTATGTA 59.103 40.000 0.00 0.00 0.00 2.29
265 266 4.716784 AGGGATGAGTGTATGTGTGTATGT 59.283 41.667 0.00 0.00 0.00 2.29
266 267 5.282055 AGGGATGAGTGTATGTGTGTATG 57.718 43.478 0.00 0.00 0.00 2.39
267 268 6.782494 TCATAGGGATGAGTGTATGTGTGTAT 59.218 38.462 0.00 0.00 37.15 2.29
268 269 6.133356 TCATAGGGATGAGTGTATGTGTGTA 58.867 40.000 0.00 0.00 37.15 2.90
269 270 4.962362 TCATAGGGATGAGTGTATGTGTGT 59.038 41.667 0.00 0.00 37.15 3.72
270 271 5.535753 TCATAGGGATGAGTGTATGTGTG 57.464 43.478 0.00 0.00 37.15 3.82
271 272 5.451937 CGTTCATAGGGATGAGTGTATGTGT 60.452 44.000 0.00 0.00 43.03 3.72
272 273 4.984785 CGTTCATAGGGATGAGTGTATGTG 59.015 45.833 0.00 0.00 43.03 3.21
273 274 4.501571 GCGTTCATAGGGATGAGTGTATGT 60.502 45.833 0.00 0.00 43.03 2.29
274 275 3.990469 GCGTTCATAGGGATGAGTGTATG 59.010 47.826 0.00 0.00 43.03 2.39
275 276 3.641436 TGCGTTCATAGGGATGAGTGTAT 59.359 43.478 0.00 0.00 43.03 2.29
276 277 3.028130 TGCGTTCATAGGGATGAGTGTA 58.972 45.455 0.00 0.00 43.03 2.90
277 278 1.831106 TGCGTTCATAGGGATGAGTGT 59.169 47.619 0.00 0.00 43.03 3.55
278 279 2.205074 GTGCGTTCATAGGGATGAGTG 58.795 52.381 0.00 0.00 43.03 3.51
279 280 1.202417 CGTGCGTTCATAGGGATGAGT 60.202 52.381 0.00 0.00 43.03 3.41
280 281 1.491670 CGTGCGTTCATAGGGATGAG 58.508 55.000 0.00 0.00 43.03 2.90
281 282 0.529773 GCGTGCGTTCATAGGGATGA 60.530 55.000 0.00 0.00 40.45 2.92
282 283 0.809636 TGCGTGCGTTCATAGGGATG 60.810 55.000 0.00 0.00 0.00 3.51
283 284 0.106708 ATGCGTGCGTTCATAGGGAT 59.893 50.000 0.00 0.00 0.00 3.85
284 285 0.747852 TATGCGTGCGTTCATAGGGA 59.252 50.000 0.00 0.00 0.00 4.20
285 286 0.859232 GTATGCGTGCGTTCATAGGG 59.141 55.000 0.00 0.00 0.00 3.53
286 287 1.257936 GTGTATGCGTGCGTTCATAGG 59.742 52.381 0.00 0.00 0.00 2.57
287 288 1.923864 TGTGTATGCGTGCGTTCATAG 59.076 47.619 0.00 0.00 0.00 2.23
288 289 1.656594 GTGTGTATGCGTGCGTTCATA 59.343 47.619 0.00 0.00 0.00 2.15
289 290 0.442310 GTGTGTATGCGTGCGTTCAT 59.558 50.000 0.00 0.00 0.00 2.57
290 291 1.561717 GGTGTGTATGCGTGCGTTCA 61.562 55.000 0.00 0.00 0.00 3.18
291 292 1.131826 GGTGTGTATGCGTGCGTTC 59.868 57.895 0.00 0.00 0.00 3.95
292 293 2.322081 GGGTGTGTATGCGTGCGTT 61.322 57.895 0.00 0.00 0.00 4.84
293 294 1.879737 TAGGGTGTGTATGCGTGCGT 61.880 55.000 0.00 0.00 0.00 5.24
294 295 1.153726 TAGGGTGTGTATGCGTGCG 60.154 57.895 0.00 0.00 0.00 5.34
295 296 1.087771 GGTAGGGTGTGTATGCGTGC 61.088 60.000 0.00 0.00 0.00 5.34
296 297 0.461339 GGGTAGGGTGTGTATGCGTG 60.461 60.000 0.00 0.00 0.00 5.34
297 298 0.616679 AGGGTAGGGTGTGTATGCGT 60.617 55.000 0.00 0.00 0.00 5.24
298 299 0.539986 AAGGGTAGGGTGTGTATGCG 59.460 55.000 0.00 0.00 0.00 4.73
299 300 3.389983 TCATAAGGGTAGGGTGTGTATGC 59.610 47.826 0.00 0.00 0.00 3.14
300 301 5.104693 TGTTCATAAGGGTAGGGTGTGTATG 60.105 44.000 0.00 0.00 0.00 2.39
301 302 5.034200 TGTTCATAAGGGTAGGGTGTGTAT 58.966 41.667 0.00 0.00 0.00 2.29
302 303 4.427637 TGTTCATAAGGGTAGGGTGTGTA 58.572 43.478 0.00 0.00 0.00 2.90
303 304 3.253220 TGTTCATAAGGGTAGGGTGTGT 58.747 45.455 0.00 0.00 0.00 3.72
304 305 3.992943 TGTTCATAAGGGTAGGGTGTG 57.007 47.619 0.00 0.00 0.00 3.82
305 306 4.371681 AGATGTTCATAAGGGTAGGGTGT 58.628 43.478 0.00 0.00 0.00 4.16
306 307 4.202367 GGAGATGTTCATAAGGGTAGGGTG 60.202 50.000 0.00 0.00 0.00 4.61
307 308 3.974642 GGAGATGTTCATAAGGGTAGGGT 59.025 47.826 0.00 0.00 0.00 4.34
308 309 3.973973 TGGAGATGTTCATAAGGGTAGGG 59.026 47.826 0.00 0.00 0.00 3.53
309 310 5.366768 TCTTGGAGATGTTCATAAGGGTAGG 59.633 44.000 0.00 0.00 0.00 3.18
310 311 6.485830 TCTTGGAGATGTTCATAAGGGTAG 57.514 41.667 0.00 0.00 0.00 3.18
311 312 6.884472 TTCTTGGAGATGTTCATAAGGGTA 57.116 37.500 0.00 0.00 0.00 3.69
312 313 5.779241 TTCTTGGAGATGTTCATAAGGGT 57.221 39.130 0.00 0.00 0.00 4.34
313 314 6.094603 CAGTTTCTTGGAGATGTTCATAAGGG 59.905 42.308 0.00 0.00 0.00 3.95
314 315 6.881065 TCAGTTTCTTGGAGATGTTCATAAGG 59.119 38.462 0.00 0.00 0.00 2.69
315 316 7.413877 GCTCAGTTTCTTGGAGATGTTCATAAG 60.414 40.741 0.00 0.00 0.00 1.73
316 317 6.372659 GCTCAGTTTCTTGGAGATGTTCATAA 59.627 38.462 0.00 0.00 0.00 1.90
317 318 5.877012 GCTCAGTTTCTTGGAGATGTTCATA 59.123 40.000 0.00 0.00 0.00 2.15
318 319 4.699257 GCTCAGTTTCTTGGAGATGTTCAT 59.301 41.667 0.00 0.00 0.00 2.57
319 320 4.067896 GCTCAGTTTCTTGGAGATGTTCA 58.932 43.478 0.00 0.00 0.00 3.18
320 321 3.438434 GGCTCAGTTTCTTGGAGATGTTC 59.562 47.826 0.00 0.00 0.00 3.18
321 322 3.181440 TGGCTCAGTTTCTTGGAGATGTT 60.181 43.478 0.00 0.00 0.00 2.71
322 323 2.373169 TGGCTCAGTTTCTTGGAGATGT 59.627 45.455 0.00 0.00 0.00 3.06
323 324 3.008330 CTGGCTCAGTTTCTTGGAGATG 58.992 50.000 0.00 0.00 0.00 2.90
324 325 2.617532 GCTGGCTCAGTTTCTTGGAGAT 60.618 50.000 4.45 0.00 33.43 2.75
325 326 1.271054 GCTGGCTCAGTTTCTTGGAGA 60.271 52.381 4.45 0.00 33.43 3.71
326 327 1.163554 GCTGGCTCAGTTTCTTGGAG 58.836 55.000 4.45 0.00 33.43 3.86
327 328 0.473755 TGCTGGCTCAGTTTCTTGGA 59.526 50.000 4.45 0.00 33.43 3.53
328 329 0.595095 GTGCTGGCTCAGTTTCTTGG 59.405 55.000 4.45 0.00 33.43 3.61
329 330 1.311859 TGTGCTGGCTCAGTTTCTTG 58.688 50.000 4.45 0.00 33.43 3.02
330 331 2.283145 ATGTGCTGGCTCAGTTTCTT 57.717 45.000 3.83 0.00 33.43 2.52
331 332 2.283145 AATGTGCTGGCTCAGTTTCT 57.717 45.000 3.83 0.00 33.43 2.52
332 333 3.944015 AGATAATGTGCTGGCTCAGTTTC 59.056 43.478 3.17 5.46 33.43 2.78
333 334 3.960571 AGATAATGTGCTGGCTCAGTTT 58.039 40.909 3.17 0.00 33.43 2.66
334 335 3.641434 AGATAATGTGCTGGCTCAGTT 57.359 42.857 3.17 1.84 33.43 3.16
335 336 3.054875 TCAAGATAATGTGCTGGCTCAGT 60.055 43.478 3.83 3.59 33.43 3.41
336 337 3.538591 TCAAGATAATGTGCTGGCTCAG 58.461 45.455 3.83 0.00 34.12 3.35
337 338 3.198417 TCTCAAGATAATGTGCTGGCTCA 59.802 43.478 0.00 0.00 0.00 4.26
338 339 3.801698 TCTCAAGATAATGTGCTGGCTC 58.198 45.455 0.00 0.00 0.00 4.70
339 340 3.199508 ACTCTCAAGATAATGTGCTGGCT 59.800 43.478 0.00 0.00 0.00 4.75
340 341 3.539604 ACTCTCAAGATAATGTGCTGGC 58.460 45.455 0.00 0.00 0.00 4.85
341 342 7.615582 TTTTACTCTCAAGATAATGTGCTGG 57.384 36.000 0.00 0.00 0.00 4.85
342 343 7.642978 GCATTTTACTCTCAAGATAATGTGCTG 59.357 37.037 0.00 0.00 0.00 4.41
343 344 7.466455 CGCATTTTACTCTCAAGATAATGTGCT 60.466 37.037 0.00 0.00 30.34 4.40
344 345 6.630443 CGCATTTTACTCTCAAGATAATGTGC 59.370 38.462 0.00 0.00 30.34 4.57
350 351 4.127171 GCCCGCATTTTACTCTCAAGATA 58.873 43.478 0.00 0.00 0.00 1.98
358 359 2.715737 TTGTTGCCCGCATTTTACTC 57.284 45.000 0.00 0.00 0.00 2.59
361 362 4.021894 ACTTACATTGTTGCCCGCATTTTA 60.022 37.500 0.00 0.00 0.00 1.52
363 364 2.298729 ACTTACATTGTTGCCCGCATTT 59.701 40.909 0.00 0.00 0.00 2.32
370 371 2.488153 GTCCCAGACTTACATTGTTGCC 59.512 50.000 0.00 0.00 0.00 4.52
387 388 0.605589 CCACCGGAGTTCAAAGTCCC 60.606 60.000 9.46 0.00 44.13 4.46
392 393 0.107831 CCTGTCCACCGGAGTTCAAA 59.892 55.000 9.46 0.00 29.39 2.69
400 401 0.762842 TGATATCCCCTGTCCACCGG 60.763 60.000 0.00 0.00 0.00 5.28
401 402 0.681733 CTGATATCCCCTGTCCACCG 59.318 60.000 0.00 0.00 0.00 4.94
406 407 3.161866 GAGGACTCTGATATCCCCTGTC 58.838 54.545 0.00 3.89 35.38 3.51
407 408 2.158234 GGAGGACTCTGATATCCCCTGT 60.158 54.545 0.00 0.00 35.38 4.00
412 413 6.831868 GGATAGTTAGGAGGACTCTGATATCC 59.168 46.154 0.00 6.58 34.98 2.59
417 418 5.202004 GTTGGATAGTTAGGAGGACTCTGA 58.798 45.833 0.00 0.00 0.00 3.27
419 420 4.016479 TGGTTGGATAGTTAGGAGGACTCT 60.016 45.833 0.00 0.00 0.00 3.24
420 421 4.099727 GTGGTTGGATAGTTAGGAGGACTC 59.900 50.000 0.00 0.00 0.00 3.36
421 422 4.031611 GTGGTTGGATAGTTAGGAGGACT 58.968 47.826 0.00 0.00 0.00 3.85
422 423 3.773119 TGTGGTTGGATAGTTAGGAGGAC 59.227 47.826 0.00 0.00 0.00 3.85
445 446 2.702788 TTCTACGGCGCGACCATCA 61.703 57.895 12.10 0.00 39.03 3.07
446 447 2.103538 TTCTACGGCGCGACCATC 59.896 61.111 12.10 0.00 39.03 3.51
450 451 1.343821 CAATGTTCTACGGCGCGAC 59.656 57.895 12.10 5.80 0.00 5.19
453 454 0.793861 TCAACAATGTTCTACGGCGC 59.206 50.000 6.90 0.00 0.00 6.53
454 455 2.415168 ACATCAACAATGTTCTACGGCG 59.585 45.455 4.80 4.80 46.73 6.46
455 456 3.435327 TCACATCAACAATGTTCTACGGC 59.565 43.478 0.00 0.00 46.73 5.68
458 459 9.121517 CAAAAGATCACATCAACAATGTTCTAC 57.878 33.333 0.00 0.00 46.73 2.59
470 471 9.725019 AACTGACTTATACAAAAGATCACATCA 57.275 29.630 0.00 0.00 0.00 3.07
487 493 9.793259 AACATGAAATAGGAGAAAACTGACTTA 57.207 29.630 0.00 0.00 0.00 2.24
488 494 8.697507 AACATGAAATAGGAGAAAACTGACTT 57.302 30.769 0.00 0.00 0.00 3.01
625 636 0.391130 TTTGCAGTTCGGATCGGAGG 60.391 55.000 2.99 0.00 0.00 4.30
677 688 2.397549 GCGATGCTTATTTTGATGGGC 58.602 47.619 0.00 0.00 0.00 5.36
723 734 1.407025 GGATGGGGAAAACGAGAGACC 60.407 57.143 0.00 0.00 0.00 3.85
1142 1158 9.747898 TCTTATCCAACAAGCTTTATTAGGAAA 57.252 29.630 0.00 2.78 0.00 3.13
1148 1164 8.616076 CGAGAATCTTATCCAACAAGCTTTATT 58.384 33.333 0.00 0.00 0.00 1.40
1149 1165 7.227512 CCGAGAATCTTATCCAACAAGCTTTAT 59.772 37.037 0.00 0.00 0.00 1.40
1150 1166 6.538742 CCGAGAATCTTATCCAACAAGCTTTA 59.461 38.462 0.00 0.00 0.00 1.85
1151 1167 5.355350 CCGAGAATCTTATCCAACAAGCTTT 59.645 40.000 0.00 0.00 0.00 3.51
1223 1239 2.894126 ACAGCCTATAGGACTTCATCGG 59.106 50.000 23.61 5.99 37.39 4.18
1255 1271 2.658593 CCGCTAACCTCGGCATCG 60.659 66.667 0.00 0.00 40.46 3.84
1362 1378 0.913934 TGGATGTCAGGCTAGGGCAA 60.914 55.000 0.00 0.00 40.87 4.52
1383 1399 5.280113 CCACAAATCCACAAATCCAAATCCT 60.280 40.000 0.00 0.00 0.00 3.24
1491 1507 1.063174 GCCATGAACAGAGCGATGAAC 59.937 52.381 0.00 0.00 0.00 3.18
1494 1510 0.463295 AGGCCATGAACAGAGCGATG 60.463 55.000 5.01 0.00 0.00 3.84
1499 1515 2.617308 CTGCAATAGGCCATGAACAGAG 59.383 50.000 5.01 0.00 43.89 3.35
1684 1700 7.373493 CCTGAAATTTATCTGCTTGTGACTTT 58.627 34.615 0.00 0.00 0.00 2.66
1751 1767 7.148171 GGAGCTGCAACTGAAGAAATAAGTAAT 60.148 37.037 0.00 0.00 0.00 1.89
1777 1793 5.703130 GCAAGTAGATAAAGCCTAGAATGGG 59.297 44.000 0.00 0.00 41.37 4.00
1818 1834 7.565680 ACATCAGGTGTACTTATTTCTAAGGG 58.434 38.462 0.00 0.00 39.91 3.95
1860 5662 7.921041 ACTATTTGAGGACCATCTGAATCTA 57.079 36.000 0.00 0.00 0.00 1.98
1885 5687 8.921205 AGCCAAAATCATCTAGCAGATAAAAAT 58.079 29.630 0.00 0.00 32.12 1.82
1916 5722 6.680810 TCAAGCTACAAATTTGATGAAGGTG 58.319 36.000 24.64 12.33 0.00 4.00
1980 5786 5.722263 TGTGAAACATGGAAGGCATAAATG 58.278 37.500 0.00 0.00 45.67 2.32
2069 5875 5.585390 CACAAGCATATAGAAAGGCCAAAG 58.415 41.667 5.01 0.00 0.00 2.77
2090 5896 7.699566 TCGGGAATACACAAATAAATAAGCAC 58.300 34.615 0.00 0.00 0.00 4.40
2107 5913 3.556213 CGCCCTTCATACATTCGGGAATA 60.556 47.826 0.00 0.00 37.05 1.75
2109 5915 1.474320 CGCCCTTCATACATTCGGGAA 60.474 52.381 0.00 0.00 37.05 3.97
2128 5934 7.827819 TCTTGTTATCCTTTTACATCTCACG 57.172 36.000 0.00 0.00 0.00 4.35
2248 6054 7.097834 ACTGCATGTAACTTAGTTTAGAGGAC 58.902 38.462 1.94 0.00 0.00 3.85
2267 6073 7.945033 AATTCAAAACAACGAATAACTGCAT 57.055 28.000 0.00 0.00 31.65 3.96
2394 6200 0.958091 TTTCCATGTCCCACAAAGCG 59.042 50.000 0.00 0.00 0.00 4.68
2418 6224 7.340743 TCCTCAATTTCACCTTACAAAAACAGA 59.659 33.333 0.00 0.00 0.00 3.41
2458 6264 1.207329 ACCTCCTGCACGAAATAGGAC 59.793 52.381 0.00 0.00 35.76 3.85
2567 6373 9.869844 GACATTGATAACATTGAACTACATAGC 57.130 33.333 2.34 0.00 33.37 2.97
2651 6457 1.140161 CACCTTTGGGCATGATGCG 59.860 57.895 11.75 0.00 46.21 4.73
2746 6552 6.151691 ACAAGTGCATGTCAATACAACATTC 58.848 36.000 0.00 0.00 39.58 2.67
2852 6658 0.232303 GTGCACACGCCTATATTCGC 59.768 55.000 13.17 0.00 37.32 4.70
2853 6659 1.852942 AGTGCACACGCCTATATTCG 58.147 50.000 21.04 0.00 37.32 3.34
2873 6681 5.468409 TGAGAAACAATCGTTGCATCTAACA 59.532 36.000 0.00 0.00 32.39 2.41
2947 6755 1.881925 GCTGTGACATACTGGTTGCCA 60.882 52.381 0.00 0.00 0.00 4.92
3412 7220 4.588899 CACCTAAATCAACACCATCTCCA 58.411 43.478 0.00 0.00 0.00 3.86
3463 7271 0.039617 CGCCTCTAGGAAGAGCATCG 60.040 60.000 0.00 0.00 46.84 3.84
3582 7390 0.745845 GCTGCATCGATGAACCAGGT 60.746 55.000 29.20 0.00 0.00 4.00
3592 7400 2.729675 CGCAAACGAGCTGCATCGA 61.730 57.895 21.95 0.00 45.56 3.59
3594 7402 3.168271 TCGCAAACGAGCTGCATC 58.832 55.556 1.02 0.00 45.12 3.91
3638 7446 2.110901 AGCAAGCATCTGAGGACAAG 57.889 50.000 0.00 0.00 0.00 3.16
3672 7484 7.588143 AATTTCTACGATGCATACTGATAGC 57.412 36.000 0.00 0.00 0.00 2.97
3774 7586 6.205464 ACATATTTGAGAACGATAATGCCTGG 59.795 38.462 0.00 0.00 0.00 4.45
3825 7637 2.032550 CCATTGCTCAGCATCCTTTACG 59.967 50.000 0.00 0.00 38.76 3.18
3864 7676 3.498676 GTAGCTATGCCTACCTGCG 57.501 57.895 0.00 0.00 33.24 5.18
3923 7735 3.368531 GGTCGAAGTATGCAAGGAGAGTT 60.369 47.826 0.00 0.00 0.00 3.01
3959 7771 3.521727 ACTGACCCTGTAGTTGGAAGAT 58.478 45.455 0.00 0.00 0.00 2.40
4011 7823 1.224592 CCCACTGGCATAGTCACCC 59.775 63.158 0.00 0.00 37.60 4.61
4225 8037 1.792949 CACAGTTACAGTGGCTTCGAC 59.207 52.381 0.00 0.00 33.43 4.20
4256 8068 1.174712 ACTGGCACAACAGACCATGC 61.175 55.000 0.00 0.00 40.97 4.06
4324 8136 4.164843 TCACCTTAAACTCTGGCAAGTT 57.835 40.909 8.59 8.59 41.20 2.66
4420 8232 0.588252 CCAACTCTCAACGCACAAGG 59.412 55.000 0.00 0.00 0.00 3.61
4440 8252 4.502962 AGAGAGACTATGCAACAGCTTTC 58.497 43.478 0.00 0.00 0.00 2.62
4443 8255 3.364549 AGAGAGAGACTATGCAACAGCT 58.635 45.455 0.00 0.00 0.00 4.24
4444 8256 3.381272 AGAGAGAGAGACTATGCAACAGC 59.619 47.826 0.00 0.00 0.00 4.40
4445 8257 4.883585 AGAGAGAGAGAGACTATGCAACAG 59.116 45.833 0.00 0.00 0.00 3.16
4446 8258 4.854173 AGAGAGAGAGAGACTATGCAACA 58.146 43.478 0.00 0.00 0.00 3.33
4447 8259 5.126067 AGAGAGAGAGAGAGACTATGCAAC 58.874 45.833 0.00 0.00 0.00 4.17
4449 8261 4.408596 TGAGAGAGAGAGAGAGACTATGCA 59.591 45.833 0.00 0.00 0.00 3.96
4450 8262 4.960938 TGAGAGAGAGAGAGAGACTATGC 58.039 47.826 0.00 0.00 0.00 3.14
4451 8263 5.866092 CGATGAGAGAGAGAGAGAGACTATG 59.134 48.000 0.00 0.00 0.00 2.23
4502 8410 5.451381 CGGTCTGCAATGTAGTAGTCCAATA 60.451 44.000 0.00 0.00 31.13 1.90
4507 8415 3.696898 CTCGGTCTGCAATGTAGTAGTC 58.303 50.000 0.00 0.00 0.00 2.59
4548 8456 5.330455 TCTATTATGGTGATCTCCATCGC 57.670 43.478 28.13 0.00 45.67 4.58
4611 8519 0.390866 ACAGCGAGCCTGAGATGTTG 60.391 55.000 0.00 0.00 44.64 3.33
4633 8541 4.731612 CTCCAGCACGACAGCGCT 62.732 66.667 2.64 2.64 42.48 5.92
4634 8542 4.724602 TCTCCAGCACGACAGCGC 62.725 66.667 0.00 0.00 42.48 5.92
4635 8543 2.049156 TTCTCCAGCACGACAGCG 60.049 61.111 0.00 0.00 44.79 5.18
4646 8554 2.619332 CGAGGACCTCTTCTCTTCTCCA 60.619 54.545 19.39 0.00 0.00 3.86
4653 8561 2.164338 AGTCAACGAGGACCTCTTCTC 58.836 52.381 19.39 6.26 38.59 2.87
4668 8576 4.744570 CAGTATCTTAGGCGTGAAGTCAA 58.255 43.478 0.00 0.00 0.00 3.18
4674 8582 3.819564 AATGCAGTATCTTAGGCGTGA 57.180 42.857 0.00 0.00 0.00 4.35
4678 8586 7.359598 CGAGTATGAAAATGCAGTATCTTAGGC 60.360 40.741 0.00 0.00 0.00 3.93
4705 8613 4.004982 TGGTAAATTTGGCGTCTAGGAAC 58.995 43.478 0.00 0.00 0.00 3.62
4714 8622 3.506067 AGAAGGTTCTGGTAAATTTGGCG 59.494 43.478 0.00 0.00 35.89 5.69
4727 8635 2.042706 TCTAGTTCCGGGAGAAGGTTCT 59.957 50.000 0.00 0.00 41.00 3.01
4741 8649 8.828688 TTAGGCTTCTGTACTTTTTCTAGTTC 57.171 34.615 0.00 0.00 0.00 3.01
4771 8679 2.693074 GGCTTCTGTTCCCTCACAAAAA 59.307 45.455 0.00 0.00 0.00 1.94
4772 8680 2.091885 AGGCTTCTGTTCCCTCACAAAA 60.092 45.455 0.00 0.00 0.00 2.44
4773 8681 1.494721 AGGCTTCTGTTCCCTCACAAA 59.505 47.619 0.00 0.00 0.00 2.83
4774 8682 1.140312 AGGCTTCTGTTCCCTCACAA 58.860 50.000 0.00 0.00 0.00 3.33
4775 8683 2.024176 TAGGCTTCTGTTCCCTCACA 57.976 50.000 0.00 0.00 0.00 3.58
4776 8684 2.303311 ACTTAGGCTTCTGTTCCCTCAC 59.697 50.000 0.00 0.00 0.00 3.51
4777 8685 2.621070 ACTTAGGCTTCTGTTCCCTCA 58.379 47.619 0.00 0.00 0.00 3.86
4778 8686 3.704800 AACTTAGGCTTCTGTTCCCTC 57.295 47.619 0.00 0.00 0.00 4.30
4779 8687 4.844655 TCTTAACTTAGGCTTCTGTTCCCT 59.155 41.667 0.00 0.00 0.00 4.20
4780 8688 5.161943 TCTTAACTTAGGCTTCTGTTCCC 57.838 43.478 0.00 0.00 0.00 3.97
4781 8689 7.010275 CGTAATCTTAACTTAGGCTTCTGTTCC 59.990 40.741 0.00 0.00 0.00 3.62
4782 8690 7.010275 CCGTAATCTTAACTTAGGCTTCTGTTC 59.990 40.741 0.00 0.00 0.00 3.18
4783 8691 6.817140 CCGTAATCTTAACTTAGGCTTCTGTT 59.183 38.462 0.00 0.00 0.00 3.16
4799 8707 4.322499 CCTTGTACACACCTCCGTAATCTT 60.322 45.833 0.00 0.00 0.00 2.40
4841 8754 2.257207 CTCCTCCTTGTACCTCACCAA 58.743 52.381 0.00 0.00 0.00 3.67
4857 8770 1.400846 CGTACGTGTAGCATCACTCCT 59.599 52.381 7.22 0.00 36.33 3.69
4863 8776 5.061808 AGTTTTTGATCGTACGTGTAGCATC 59.938 40.000 16.05 10.05 0.00 3.91
4977 8890 1.278238 GTACGACACTGCTATGGTGC 58.722 55.000 0.00 0.00 38.14 5.01
4984 8897 0.732880 GATGTGCGTACGACACTGCT 60.733 55.000 29.35 19.74 38.86 4.24
5011 8926 3.642901 CGAACTACGGTCCATGGAG 57.357 57.895 16.81 7.12 38.46 3.86
5032 8947 2.021457 ACCTAGAAGCGAGAGAAGAGC 58.979 52.381 0.00 0.00 0.00 4.09
5050 8965 3.578282 ATGTTTTCATGTCCAAGGGAACC 59.422 43.478 0.00 0.00 44.72 3.62
5068 8983 2.879103 ATCCCGTTTGAGTCCATGTT 57.121 45.000 0.00 0.00 0.00 2.71
5093 9008 1.315257 ATGCCTGCCGTTTGACATCC 61.315 55.000 0.00 0.00 0.00 3.51
5106 9021 2.749076 TCTGAATTTTCGACCATGCCTG 59.251 45.455 0.00 0.00 0.00 4.85
5108 9023 2.098117 CCTCTGAATTTTCGACCATGCC 59.902 50.000 0.00 0.00 0.00 4.40
5109 9024 2.478539 GCCTCTGAATTTTCGACCATGC 60.479 50.000 0.00 0.00 0.00 4.06
5110 9025 2.223112 CGCCTCTGAATTTTCGACCATG 60.223 50.000 0.00 0.00 0.00 3.66
5131 9076 3.368571 GGCCACCACTGAGCTTGC 61.369 66.667 0.00 0.00 0.00 4.01
5138 9083 0.967380 GGAATTCCAGGCCACCACTG 60.967 60.000 20.04 0.00 35.64 3.66
5152 9097 3.814504 ACACCCTGAAGTCATGGAATT 57.185 42.857 9.33 0.00 35.54 2.17
5177 9122 0.246635 GCCGAGCCAACAGAGTCTAA 59.753 55.000 0.00 0.00 0.00 2.10
5181 9126 2.345244 CTGCCGAGCCAACAGAGT 59.655 61.111 0.00 0.00 33.10 3.24
5192 9137 2.214181 GAAGTCTCGAAGCCTGCCGA 62.214 60.000 0.00 0.00 0.00 5.54
5194 9139 0.459411 GAGAAGTCTCGAAGCCTGCC 60.459 60.000 0.00 0.00 32.78 4.85
5198 9143 3.851976 TTAGTGAGAAGTCTCGAAGCC 57.148 47.619 3.95 0.00 45.72 4.35
5203 9148 3.367498 CCCAGGTTTAGTGAGAAGTCTCG 60.367 52.174 3.95 0.00 45.72 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.