Multiple sequence alignment - TraesCS2D01G290000

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G290000 chr2D 100.000 2597 0 0 207 2803 372223250 372225846 0.000000e+00 4796.0
1 TraesCS2D01G290000 chr2D 87.973 1164 111 19 1062 2212 372015806 372014659 0.000000e+00 1347.0
2 TraesCS2D01G290000 chr2D 96.930 228 7 0 2523 2750 8623850 8624077 1.830000e-102 383.0
3 TraesCS2D01G290000 chr2D 100.000 200 0 0 3046 3245 372226089 372226288 1.420000e-98 370.0
4 TraesCS2D01G290000 chr2D 100.000 200 0 0 3046 3245 406267357 406267556 1.420000e-98 370.0
5 TraesCS2D01G290000 chr2D 100.000 200 0 0 3046 3245 615975859 615975660 1.420000e-98 370.0
6 TraesCS2D01G290000 chr2D 100.000 135 0 0 1 135 372223044 372223178 1.930000e-62 250.0
7 TraesCS2D01G290000 chr2B 95.020 2289 55 19 262 2522 441791907 441794164 0.000000e+00 3541.0
8 TraesCS2D01G290000 chr2B 88.079 1166 115 15 1062 2212 441480315 441479159 0.000000e+00 1362.0
9 TraesCS2D01G290000 chr2B 100.000 28 0 0 77 104 63029 63002 6.000000e-03 52.8
10 TraesCS2D01G290000 chr2B 100.000 28 0 0 77 104 177286 177259 6.000000e-03 52.8
11 TraesCS2D01G290000 chr2A 94.681 2275 75 28 261 2522 502933132 502935373 0.000000e+00 3489.0
12 TraesCS2D01G290000 chr2A 88.372 1161 109 16 1068 2212 502826049 502824899 0.000000e+00 1373.0
13 TraesCS2D01G290000 chr5B 86.260 968 122 11 1270 2228 550488911 550489876 0.000000e+00 1040.0
14 TraesCS2D01G290000 chr5A 86.218 936 124 5 1270 2203 569793578 569794510 0.000000e+00 1009.0
15 TraesCS2D01G290000 chr5D 86.017 944 126 6 1270 2210 450577901 450578841 0.000000e+00 1007.0
16 TraesCS2D01G290000 chr5D 97.425 233 5 1 2519 2750 324259138 324258906 2.350000e-106 396.0
17 TraesCS2D01G290000 chr5D 99.500 200 1 0 3046 3245 210786831 210786632 6.620000e-97 364.0
18 TraesCS2D01G290000 chr5D 99.502 201 0 1 3046 3245 324254646 324254846 6.620000e-97 364.0
19 TraesCS2D01G290000 chr5D 90.714 280 17 4 2525 2803 431172925 431172654 6.620000e-97 364.0
20 TraesCS2D01G290000 chr5D 85.246 305 21 6 2523 2803 436806398 436806702 3.170000e-75 292.0
21 TraesCS2D01G290000 chr5D 80.263 304 56 3 1470 1770 447508361 447508663 3.260000e-55 226.0
22 TraesCS2D01G290000 chr5D 98.438 64 0 1 2741 2803 563680882 563680945 9.520000e-21 111.0
23 TraesCS2D01G290000 chr5D 96.923 65 0 2 2741 2803 61654670 61654734 1.230000e-19 108.0
24 TraesCS2D01G290000 chr6D 96.930 228 7 0 2523 2750 114248146 114247919 1.830000e-102 383.0
25 TraesCS2D01G290000 chr6D 99.500 200 1 0 3046 3245 162228431 162228232 6.620000e-97 364.0
26 TraesCS2D01G290000 chr6D 95.122 41 2 0 65 105 328977373 328977413 7.510000e-07 65.8
27 TraesCS2D01G290000 chr4D 96.507 229 8 0 2522 2750 310385323 310385095 2.360000e-101 379.0
28 TraesCS2D01G290000 chr4D 99.500 200 1 0 3046 3245 189690451 189690252 6.620000e-97 364.0
29 TraesCS2D01G290000 chr4D 99.500 200 1 0 3046 3245 357246889 357246690 6.620000e-97 364.0
30 TraesCS2D01G290000 chr1D 96.507 229 8 0 2522 2750 347366994 347366766 2.360000e-101 379.0
31 TraesCS2D01G290000 chr1D 96.491 228 8 0 2523 2750 201296440 201296667 8.500000e-101 377.0
32 TraesCS2D01G290000 chr1D 79.872 313 31 19 2522 2803 447244242 447244553 1.970000e-47 200.0
33 TraesCS2D01G290000 chr1D 96.875 64 1 1 2741 2803 76916958 76917021 4.430000e-19 106.0
34 TraesCS2D01G290000 chr1D 90.476 42 2 2 65 105 11408546 11408586 2.000000e-03 54.7
35 TraesCS2D01G290000 chr1D 88.889 45 4 1 65 109 435304595 435304552 2.000000e-03 54.7
36 TraesCS2D01G290000 chr3D 96.491 228 8 0 2523 2750 531689116 531689343 8.500000e-101 377.0
37 TraesCS2D01G290000 chr3D 95.708 233 9 1 2518 2750 159644022 159644253 1.100000e-99 374.0
38 TraesCS2D01G290000 chr3D 100.000 200 0 0 3046 3245 159653953 159653754 1.420000e-98 370.0
39 TraesCS2D01G290000 chr3D 79.487 312 33 17 2523 2803 307099502 307099191 3.300000e-45 193.0
40 TraesCS2D01G290000 chr3D 75.719 313 32 21 2523 2803 609818406 609818106 2.050000e-22 117.0
41 TraesCS2D01G290000 chr3D 98.413 63 1 0 2741 2803 121328492 121328430 9.520000e-21 111.0
42 TraesCS2D01G290000 chr7D 100.000 200 0 0 3046 3245 551107198 551106999 1.420000e-98 370.0
43 TraesCS2D01G290000 chr1A 95.000 40 2 0 65 104 547586536 547586575 2.700000e-06 63.9
44 TraesCS2D01G290000 chr6B 100.000 29 0 0 77 105 493323177 493323205 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G290000 chr2D 372223044 372226288 3244 False 1805.333333 4796 100.000 1 3245 3 chr2D.!!$F3 3244
1 TraesCS2D01G290000 chr2D 372014659 372015806 1147 True 1347.000000 1347 87.973 1062 2212 1 chr2D.!!$R1 1150
2 TraesCS2D01G290000 chr2B 441791907 441794164 2257 False 3541.000000 3541 95.020 262 2522 1 chr2B.!!$F1 2260
3 TraesCS2D01G290000 chr2B 441479159 441480315 1156 True 1362.000000 1362 88.079 1062 2212 1 chr2B.!!$R3 1150
4 TraesCS2D01G290000 chr2A 502933132 502935373 2241 False 3489.000000 3489 94.681 261 2522 1 chr2A.!!$F1 2261
5 TraesCS2D01G290000 chr2A 502824899 502826049 1150 True 1373.000000 1373 88.372 1068 2212 1 chr2A.!!$R1 1144
6 TraesCS2D01G290000 chr5B 550488911 550489876 965 False 1040.000000 1040 86.260 1270 2228 1 chr5B.!!$F1 958
7 TraesCS2D01G290000 chr5A 569793578 569794510 932 False 1009.000000 1009 86.218 1270 2203 1 chr5A.!!$F1 933
8 TraesCS2D01G290000 chr5D 450577901 450578841 940 False 1007.000000 1007 86.017 1270 2210 1 chr5D.!!$F5 940

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
791 807 0.617249 CCTCCCTCCAGCTCAAGTCT 60.617 60.0 0.0 0.0 0.0 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2505 2575 0.037046 GCCCCACAAATTCCTTGCAG 60.037 55.0 0.0 0.0 38.75 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 9.811995 TGTATACTTACAATAGAACCACATGTC 57.188 33.333 4.17 0.00 35.40 3.06
58 59 9.811995 GTATACTTACAATAGAACCACATGTCA 57.188 33.333 0.00 0.00 0.00 3.58
59 60 8.948631 ATACTTACAATAGAACCACATGTCAG 57.051 34.615 0.00 0.00 0.00 3.51
60 61 6.769512 ACTTACAATAGAACCACATGTCAGT 58.230 36.000 0.00 0.00 0.00 3.41
61 62 7.224297 ACTTACAATAGAACCACATGTCAGTT 58.776 34.615 9.93 9.93 27.21 3.16
62 63 7.719633 ACTTACAATAGAACCACATGTCAGTTT 59.280 33.333 11.16 5.64 27.21 2.66
63 64 6.959639 ACAATAGAACCACATGTCAGTTTT 57.040 33.333 11.16 8.75 0.00 2.43
64 65 6.970484 ACAATAGAACCACATGTCAGTTTTC 58.030 36.000 11.16 3.60 0.00 2.29
65 66 6.016276 ACAATAGAACCACATGTCAGTTTTCC 60.016 38.462 11.16 1.29 0.00 3.13
66 67 3.897239 AGAACCACATGTCAGTTTTCCA 58.103 40.909 11.16 0.00 0.00 3.53
67 68 4.473444 AGAACCACATGTCAGTTTTCCAT 58.527 39.130 11.16 0.00 0.00 3.41
68 69 4.895297 AGAACCACATGTCAGTTTTCCATT 59.105 37.500 11.16 0.00 0.00 3.16
69 70 4.853924 ACCACATGTCAGTTTTCCATTC 57.146 40.909 0.00 0.00 0.00 2.67
70 71 3.253188 ACCACATGTCAGTTTTCCATTCG 59.747 43.478 0.00 0.00 0.00 3.34
71 72 3.366273 CCACATGTCAGTTTTCCATTCGG 60.366 47.826 0.00 0.00 0.00 4.30
72 73 2.228822 ACATGTCAGTTTTCCATTCGGC 59.771 45.455 0.00 0.00 0.00 5.54
73 74 1.974265 TGTCAGTTTTCCATTCGGCA 58.026 45.000 0.00 0.00 0.00 5.69
74 75 1.606668 TGTCAGTTTTCCATTCGGCAC 59.393 47.619 0.00 0.00 0.00 5.01
75 76 1.880027 GTCAGTTTTCCATTCGGCACT 59.120 47.619 0.00 0.00 0.00 4.40
76 77 3.071479 GTCAGTTTTCCATTCGGCACTA 58.929 45.455 0.00 0.00 0.00 2.74
77 78 3.500680 GTCAGTTTTCCATTCGGCACTAA 59.499 43.478 0.00 0.00 0.00 2.24
78 79 4.156008 GTCAGTTTTCCATTCGGCACTAAT 59.844 41.667 0.00 0.00 0.00 1.73
79 80 4.155826 TCAGTTTTCCATTCGGCACTAATG 59.844 41.667 0.00 0.00 40.59 1.90
105 106 6.913170 TGAGCTATCTCAAAAACAATGAACC 58.087 36.000 0.00 0.00 45.69 3.62
106 107 6.489700 TGAGCTATCTCAAAAACAATGAACCA 59.510 34.615 0.00 0.00 45.69 3.67
107 108 7.014134 TGAGCTATCTCAAAAACAATGAACCAA 59.986 33.333 0.00 0.00 45.69 3.67
108 109 7.725251 AGCTATCTCAAAAACAATGAACCAAA 58.275 30.769 0.00 0.00 0.00 3.28
109 110 8.370182 AGCTATCTCAAAAACAATGAACCAAAT 58.630 29.630 0.00 0.00 0.00 2.32
110 111 8.437742 GCTATCTCAAAAACAATGAACCAAATG 58.562 33.333 0.00 0.00 0.00 2.32
111 112 9.480053 CTATCTCAAAAACAATGAACCAAATGT 57.520 29.630 0.00 0.00 0.00 2.71
112 113 8.735692 ATCTCAAAAACAATGAACCAAATGTT 57.264 26.923 0.00 0.00 40.81 2.71
113 114 9.829507 ATCTCAAAAACAATGAACCAAATGTTA 57.170 25.926 0.00 0.00 37.29 2.41
114 115 9.311916 TCTCAAAAACAATGAACCAAATGTTAG 57.688 29.630 0.00 0.00 37.29 2.34
115 116 9.097257 CTCAAAAACAATGAACCAAATGTTAGT 57.903 29.630 0.00 0.00 37.29 2.24
116 117 9.442047 TCAAAAACAATGAACCAAATGTTAGTT 57.558 25.926 0.00 0.00 37.29 2.24
117 118 9.701355 CAAAAACAATGAACCAAATGTTAGTTC 57.299 29.630 0.00 0.00 37.29 3.01
118 119 7.692908 AAACAATGAACCAAATGTTAGTTCG 57.307 32.000 0.00 0.00 42.22 3.95
119 120 5.768317 ACAATGAACCAAATGTTAGTTCGG 58.232 37.500 0.00 0.00 42.22 4.30
120 121 5.533154 ACAATGAACCAAATGTTAGTTCGGA 59.467 36.000 0.00 0.00 42.22 4.55
121 122 5.880054 ATGAACCAAATGTTAGTTCGGAG 57.120 39.130 0.00 0.00 42.22 4.63
122 123 4.963373 TGAACCAAATGTTAGTTCGGAGA 58.037 39.130 0.00 0.00 42.22 3.71
123 124 5.556915 TGAACCAAATGTTAGTTCGGAGAT 58.443 37.500 0.00 0.00 42.22 2.75
124 125 6.703319 TGAACCAAATGTTAGTTCGGAGATA 58.297 36.000 0.00 0.00 42.22 1.98
125 126 6.592607 TGAACCAAATGTTAGTTCGGAGATAC 59.407 38.462 0.00 0.00 42.22 2.24
126 127 6.045072 ACCAAATGTTAGTTCGGAGATACA 57.955 37.500 0.00 0.00 35.04 2.29
127 128 6.106673 ACCAAATGTTAGTTCGGAGATACAG 58.893 40.000 0.00 0.00 35.04 2.74
128 129 6.070995 ACCAAATGTTAGTTCGGAGATACAGA 60.071 38.462 0.00 0.00 35.04 3.41
129 130 6.477033 CCAAATGTTAGTTCGGAGATACAGAG 59.523 42.308 0.00 0.00 35.04 3.35
130 131 6.777213 AATGTTAGTTCGGAGATACAGAGT 57.223 37.500 0.00 0.00 35.04 3.24
131 132 7.876936 AATGTTAGTTCGGAGATACAGAGTA 57.123 36.000 0.00 0.00 35.04 2.59
132 133 7.876936 ATGTTAGTTCGGAGATACAGAGTAA 57.123 36.000 0.00 0.00 35.04 2.24
133 134 7.317842 TGTTAGTTCGGAGATACAGAGTAAG 57.682 40.000 0.00 0.00 35.04 2.34
134 135 6.318144 TGTTAGTTCGGAGATACAGAGTAAGG 59.682 42.308 0.00 0.00 35.04 2.69
229 230 6.455360 GGGAATCATGTGCTAATTTGAAGA 57.545 37.500 0.00 0.00 0.00 2.87
230 231 6.866480 GGGAATCATGTGCTAATTTGAAGAA 58.134 36.000 0.00 0.00 0.00 2.52
231 232 7.322664 GGGAATCATGTGCTAATTTGAAGAAA 58.677 34.615 0.00 0.00 0.00 2.52
232 233 7.490402 GGGAATCATGTGCTAATTTGAAGAAAG 59.510 37.037 0.00 0.00 0.00 2.62
233 234 8.031277 GGAATCATGTGCTAATTTGAAGAAAGT 58.969 33.333 0.00 0.00 0.00 2.66
257 258 9.629649 AGTAAATATCTAAATGGATACCTGGGA 57.370 33.333 0.00 0.00 31.98 4.37
316 317 3.750371 TGAATTATTACCCCTCGCCATG 58.250 45.455 0.00 0.00 0.00 3.66
317 318 3.137544 TGAATTATTACCCCTCGCCATGT 59.862 43.478 0.00 0.00 0.00 3.21
318 319 3.876309 ATTATTACCCCTCGCCATGTT 57.124 42.857 0.00 0.00 0.00 2.71
319 320 3.655615 TTATTACCCCTCGCCATGTTT 57.344 42.857 0.00 0.00 0.00 2.83
320 321 4.774660 TTATTACCCCTCGCCATGTTTA 57.225 40.909 0.00 0.00 0.00 2.01
321 322 3.655615 ATTACCCCTCGCCATGTTTAA 57.344 42.857 0.00 0.00 0.00 1.52
322 323 3.655615 TTACCCCTCGCCATGTTTAAT 57.344 42.857 0.00 0.00 0.00 1.40
323 324 1.762708 ACCCCTCGCCATGTTTAATG 58.237 50.000 0.00 0.00 0.00 1.90
347 348 2.187958 TGTTGGAGGGATTCATCGTCT 58.812 47.619 0.00 0.00 0.00 4.18
353 354 4.080356 TGGAGGGATTCATCGTCTGAAATT 60.080 41.667 7.15 0.00 46.62 1.82
388 389 1.556911 TCTGCCTCATCCCAAGAGAAC 59.443 52.381 0.00 0.00 35.09 3.01
391 392 2.087646 GCCTCATCCCAAGAGAACAAC 58.912 52.381 0.00 0.00 35.09 3.32
490 496 2.125147 CGGGCGATCCAAGAAGCA 60.125 61.111 0.00 0.00 34.36 3.91
594 610 5.631512 CACGTTCTCCTTCAGTTTCTTCTAG 59.368 44.000 0.00 0.00 0.00 2.43
595 611 5.302313 ACGTTCTCCTTCAGTTTCTTCTAGT 59.698 40.000 0.00 0.00 0.00 2.57
596 612 6.183360 ACGTTCTCCTTCAGTTTCTTCTAGTT 60.183 38.462 0.00 0.00 0.00 2.24
597 613 6.363896 CGTTCTCCTTCAGTTTCTTCTAGTTC 59.636 42.308 0.00 0.00 0.00 3.01
598 614 7.438564 GTTCTCCTTCAGTTTCTTCTAGTTCT 58.561 38.462 0.00 0.00 0.00 3.01
599 615 8.578151 GTTCTCCTTCAGTTTCTTCTAGTTCTA 58.422 37.037 0.00 0.00 0.00 2.10
600 616 8.113173 TCTCCTTCAGTTTCTTCTAGTTCTAC 57.887 38.462 0.00 0.00 0.00 2.59
650 666 1.301716 TGAAGCAGGCCAAGACGTC 60.302 57.895 7.70 7.70 0.00 4.34
791 807 0.617249 CCTCCCTCCAGCTCAAGTCT 60.617 60.000 0.00 0.00 0.00 3.24
793 809 0.979665 TCCCTCCAGCTCAAGTCTTG 59.020 55.000 6.21 6.21 0.00 3.02
832 850 3.104512 CGCCACCTATATATCCCCTTCA 58.895 50.000 0.00 0.00 0.00 3.02
877 895 1.209504 CCCCCATCGAAGCTTACTCAA 59.790 52.381 0.00 0.00 0.00 3.02
878 896 2.158755 CCCCCATCGAAGCTTACTCAAT 60.159 50.000 0.00 0.00 0.00 2.57
879 897 3.545703 CCCCATCGAAGCTTACTCAATT 58.454 45.455 0.00 0.00 0.00 2.32
887 905 6.561614 TCGAAGCTTACTCAATTACTACCTG 58.438 40.000 0.00 0.00 0.00 4.00
1005 1045 1.078426 GCCGTTACTGGTCATGGCT 60.078 57.895 10.00 0.00 39.38 4.75
2358 2422 6.563222 TGGGGTAATTAGTTTTGTTCTTCG 57.437 37.500 0.00 0.00 0.00 3.79
2364 2428 8.340443 GGTAATTAGTTTTGTTCTTCGTGTTCT 58.660 33.333 0.00 0.00 0.00 3.01
2365 2429 9.712359 GTAATTAGTTTTGTTCTTCGTGTTCTT 57.288 29.630 0.00 0.00 0.00 2.52
2366 2430 8.614994 AATTAGTTTTGTTCTTCGTGTTCTTG 57.385 30.769 0.00 0.00 0.00 3.02
2406 2470 0.955428 TCGTGCCATTTGAGCCAGTC 60.955 55.000 0.00 0.00 0.00 3.51
2418 2488 1.021390 AGCCAGTCAATACGCAGTGC 61.021 55.000 4.58 4.58 45.73 4.40
2420 2490 0.723414 CCAGTCAATACGCAGTGCAG 59.277 55.000 16.83 10.53 45.73 4.41
2422 2492 1.127397 CAGTCAATACGCAGTGCAGTG 59.873 52.381 17.56 17.56 45.73 3.66
2423 2493 0.443869 GTCAATACGCAGTGCAGTGG 59.556 55.000 22.71 14.71 45.73 4.00
2424 2494 0.320050 TCAATACGCAGTGCAGTGGA 59.680 50.000 22.71 7.67 45.73 4.02
2425 2495 1.155889 CAATACGCAGTGCAGTGGAA 58.844 50.000 22.71 0.05 45.73 3.53
2426 2496 1.739466 CAATACGCAGTGCAGTGGAAT 59.261 47.619 22.71 2.43 45.73 3.01
2427 2497 2.935849 CAATACGCAGTGCAGTGGAATA 59.064 45.455 22.71 3.81 45.73 1.75
2428 2498 2.293677 TACGCAGTGCAGTGGAATAG 57.706 50.000 22.71 0.00 45.73 1.73
2446 2516 6.323996 TGGAATAGTACCCTGTGAGATACAAG 59.676 42.308 0.00 0.00 39.20 3.16
2480 2550 2.970324 GCCTGTGTCGTGCCGAAA 60.970 61.111 0.00 0.00 37.72 3.46
2501 2571 0.179067 AACTTGTCGGGCTCAAACGA 60.179 50.000 0.00 0.00 36.68 3.85
2505 2575 1.206831 GTCGGGCTCAAACGAAAGC 59.793 57.895 0.00 0.00 41.17 3.51
2522 2592 0.971386 AGCTGCAAGGAATTTGTGGG 59.029 50.000 1.02 0.00 39.08 4.61
2523 2593 0.037046 GCTGCAAGGAATTTGTGGGG 60.037 55.000 0.00 0.00 39.08 4.96
2524 2594 0.037046 CTGCAAGGAATTTGTGGGGC 60.037 55.000 0.00 0.00 39.08 5.80
2525 2595 0.762082 TGCAAGGAATTTGTGGGGCA 60.762 50.000 0.00 0.00 39.08 5.36
2526 2596 0.396060 GCAAGGAATTTGTGGGGCAA 59.604 50.000 0.00 0.00 39.08 4.52
2535 2605 3.634397 TTTGTGGGGCAAATTTGACAA 57.366 38.095 25.05 19.56 41.68 3.18
2536 2606 2.611225 TGTGGGGCAAATTTGACAAC 57.389 45.000 25.05 20.99 38.18 3.32
2537 2607 1.202463 TGTGGGGCAAATTTGACAACG 60.202 47.619 25.05 0.00 38.18 4.10
2538 2608 1.115467 TGGGGCAAATTTGACAACGT 58.885 45.000 25.05 0.00 38.18 3.99
2539 2609 1.482593 TGGGGCAAATTTGACAACGTT 59.517 42.857 25.05 0.00 38.18 3.99
2540 2610 2.693591 TGGGGCAAATTTGACAACGTTA 59.306 40.909 25.05 2.12 38.18 3.18
2541 2611 3.132289 TGGGGCAAATTTGACAACGTTAA 59.868 39.130 25.05 0.00 38.18 2.01
2542 2612 3.491639 GGGGCAAATTTGACAACGTTAAC 59.508 43.478 25.05 5.31 38.18 2.01
2543 2613 3.491639 GGGCAAATTTGACAACGTTAACC 59.508 43.478 25.05 10.39 38.18 2.85
2544 2614 4.364860 GGCAAATTTGACAACGTTAACCT 58.635 39.130 22.31 0.00 35.83 3.50
2545 2615 5.507650 GGGCAAATTTGACAACGTTAACCTA 60.508 40.000 25.05 0.00 38.18 3.08
2546 2616 6.153756 GGCAAATTTGACAACGTTAACCTAT 58.846 36.000 22.31 0.00 35.83 2.57
2547 2617 7.306953 GGCAAATTTGACAACGTTAACCTATA 58.693 34.615 22.31 0.00 35.83 1.31
2548 2618 7.808856 GGCAAATTTGACAACGTTAACCTATAA 59.191 33.333 22.31 0.00 35.83 0.98
2549 2619 9.349145 GCAAATTTGACAACGTTAACCTATAAT 57.651 29.630 22.31 0.00 0.00 1.28
2551 2621 9.763465 AAATTTGACAACGTTAACCTATAATCG 57.237 29.630 0.00 0.00 0.00 3.34
2552 2622 8.706492 ATTTGACAACGTTAACCTATAATCGA 57.294 30.769 0.00 0.00 0.00 3.59
2553 2623 8.531622 TTTGACAACGTTAACCTATAATCGAA 57.468 30.769 0.00 0.00 0.00 3.71
2554 2624 8.531622 TTGACAACGTTAACCTATAATCGAAA 57.468 30.769 0.00 0.00 0.00 3.46
2555 2625 8.176814 TGACAACGTTAACCTATAATCGAAAG 57.823 34.615 0.00 0.00 0.00 2.62
2556 2626 6.997222 ACAACGTTAACCTATAATCGAAAGC 58.003 36.000 0.00 0.00 0.00 3.51
2557 2627 6.591062 ACAACGTTAACCTATAATCGAAAGCA 59.409 34.615 0.00 0.00 0.00 3.91
2558 2628 7.118101 ACAACGTTAACCTATAATCGAAAGCAA 59.882 33.333 0.00 0.00 0.00 3.91
2559 2629 7.599630 ACGTTAACCTATAATCGAAAGCAAA 57.400 32.000 0.00 0.00 0.00 3.68
2560 2630 8.205131 ACGTTAACCTATAATCGAAAGCAAAT 57.795 30.769 0.00 0.00 0.00 2.32
2561 2631 8.333186 ACGTTAACCTATAATCGAAAGCAAATC 58.667 33.333 0.00 0.00 0.00 2.17
2562 2632 8.332464 CGTTAACCTATAATCGAAAGCAAATCA 58.668 33.333 0.00 0.00 0.00 2.57
2563 2633 9.434559 GTTAACCTATAATCGAAAGCAAATCAC 57.565 33.333 0.00 0.00 0.00 3.06
2564 2634 7.624360 AACCTATAATCGAAAGCAAATCACA 57.376 32.000 0.00 0.00 0.00 3.58
2565 2635 7.251704 ACCTATAATCGAAAGCAAATCACAG 57.748 36.000 0.00 0.00 0.00 3.66
2566 2636 7.047891 ACCTATAATCGAAAGCAAATCACAGA 58.952 34.615 0.00 0.00 0.00 3.41
2567 2637 7.552687 ACCTATAATCGAAAGCAAATCACAGAA 59.447 33.333 0.00 0.00 0.00 3.02
2568 2638 8.562892 CCTATAATCGAAAGCAAATCACAGAAT 58.437 33.333 0.00 0.00 0.00 2.40
2569 2639 9.378597 CTATAATCGAAAGCAAATCACAGAATG 57.621 33.333 0.00 0.00 46.00 2.67
2570 2640 5.885230 ATCGAAAGCAAATCACAGAATGA 57.115 34.783 0.00 0.00 43.13 2.57
2571 2641 5.687770 TCGAAAGCAAATCACAGAATGAA 57.312 34.783 0.00 0.00 41.93 2.57
2572 2642 5.451908 TCGAAAGCAAATCACAGAATGAAC 58.548 37.500 0.00 0.00 41.93 3.18
2573 2643 5.239306 TCGAAAGCAAATCACAGAATGAACT 59.761 36.000 0.00 0.00 41.93 3.01
2574 2644 5.341462 CGAAAGCAAATCACAGAATGAACTG 59.659 40.000 0.00 0.00 41.93 3.16
2575 2645 4.778534 AGCAAATCACAGAATGAACTGG 57.221 40.909 0.00 0.00 41.93 4.00
2576 2646 4.147321 AGCAAATCACAGAATGAACTGGT 58.853 39.130 0.00 0.00 41.93 4.00
2577 2647 4.586001 AGCAAATCACAGAATGAACTGGTT 59.414 37.500 0.00 0.00 41.93 3.67
2578 2648 4.919754 GCAAATCACAGAATGAACTGGTTC 59.080 41.667 6.53 6.53 41.93 3.62
2579 2649 5.464168 CAAATCACAGAATGAACTGGTTCC 58.536 41.667 10.44 0.00 41.93 3.62
2580 2650 2.766313 TCACAGAATGAACTGGTTCCG 58.234 47.619 10.44 0.00 39.69 4.30
2581 2651 2.367241 TCACAGAATGAACTGGTTCCGA 59.633 45.455 10.44 0.00 39.69 4.55
2582 2652 3.138304 CACAGAATGAACTGGTTCCGAA 58.862 45.455 10.44 0.00 39.69 4.30
2583 2653 3.563808 CACAGAATGAACTGGTTCCGAAA 59.436 43.478 10.44 0.00 39.69 3.46
2584 2654 3.564225 ACAGAATGAACTGGTTCCGAAAC 59.436 43.478 10.44 0.00 39.69 2.78
2585 2655 3.815401 CAGAATGAACTGGTTCCGAAACT 59.185 43.478 10.44 1.99 39.69 2.66
2586 2656 4.994852 CAGAATGAACTGGTTCCGAAACTA 59.005 41.667 10.44 0.00 39.69 2.24
2587 2657 5.643777 CAGAATGAACTGGTTCCGAAACTAT 59.356 40.000 10.44 0.00 39.69 2.12
2588 2658 6.149474 CAGAATGAACTGGTTCCGAAACTATT 59.851 38.462 10.44 2.78 39.69 1.73
2589 2659 6.715264 AGAATGAACTGGTTCCGAAACTATTT 59.285 34.615 10.44 0.00 38.77 1.40
2590 2660 5.934935 TGAACTGGTTCCGAAACTATTTC 57.065 39.130 10.44 0.00 36.61 2.17
2591 2661 5.369833 TGAACTGGTTCCGAAACTATTTCA 58.630 37.500 10.44 0.03 40.63 2.69
2592 2662 5.237779 TGAACTGGTTCCGAAACTATTTCAC 59.762 40.000 10.44 0.00 39.18 3.18
2593 2663 4.710324 ACTGGTTCCGAAACTATTTCACA 58.290 39.130 0.00 0.00 39.63 3.58
2594 2664 4.514066 ACTGGTTCCGAAACTATTTCACAC 59.486 41.667 0.00 0.00 39.63 3.82
2595 2665 3.816523 TGGTTCCGAAACTATTTCACACC 59.183 43.478 0.00 4.88 39.63 4.16
2596 2666 3.189910 GGTTCCGAAACTATTTCACACCC 59.810 47.826 2.50 0.00 39.63 4.61
2597 2667 3.062122 TCCGAAACTATTTCACACCCC 57.938 47.619 2.50 0.00 39.63 4.95
2598 2668 2.640826 TCCGAAACTATTTCACACCCCT 59.359 45.455 2.50 0.00 39.63 4.79
2599 2669 3.839490 TCCGAAACTATTTCACACCCCTA 59.161 43.478 2.50 0.00 39.63 3.53
2600 2670 4.286549 TCCGAAACTATTTCACACCCCTAA 59.713 41.667 2.50 0.00 39.63 2.69
2601 2671 4.393990 CCGAAACTATTTCACACCCCTAAC 59.606 45.833 2.50 0.00 39.63 2.34
2602 2672 4.393990 CGAAACTATTTCACACCCCTAACC 59.606 45.833 2.50 0.00 39.63 2.85
2603 2673 4.311520 AACTATTTCACACCCCTAACCC 57.688 45.455 0.00 0.00 0.00 4.11
2604 2674 3.538387 ACTATTTCACACCCCTAACCCT 58.462 45.455 0.00 0.00 0.00 4.34
2605 2675 3.920841 ACTATTTCACACCCCTAACCCTT 59.079 43.478 0.00 0.00 0.00 3.95
2606 2676 3.915346 ATTTCACACCCCTAACCCTTT 57.085 42.857 0.00 0.00 0.00 3.11
2607 2677 3.691698 TTTCACACCCCTAACCCTTTT 57.308 42.857 0.00 0.00 0.00 2.27
2608 2678 2.668144 TCACACCCCTAACCCTTTTG 57.332 50.000 0.00 0.00 0.00 2.44
2609 2679 1.854280 TCACACCCCTAACCCTTTTGT 59.146 47.619 0.00 0.00 0.00 2.83
2610 2680 1.960689 CACACCCCTAACCCTTTTGTG 59.039 52.381 0.00 0.00 0.00 3.33
2611 2681 1.571936 ACACCCCTAACCCTTTTGTGT 59.428 47.619 0.00 0.00 0.00 3.72
2612 2682 2.784682 ACACCCCTAACCCTTTTGTGTA 59.215 45.455 0.00 0.00 34.03 2.90
2613 2683 3.181437 ACACCCCTAACCCTTTTGTGTAG 60.181 47.826 0.00 0.00 34.03 2.74
2614 2684 2.224942 ACCCCTAACCCTTTTGTGTAGC 60.225 50.000 0.00 0.00 0.00 3.58
2615 2685 2.081462 CCCTAACCCTTTTGTGTAGCG 58.919 52.381 0.00 0.00 0.00 4.26
2616 2686 1.467342 CCTAACCCTTTTGTGTAGCGC 59.533 52.381 0.00 0.00 0.00 5.92
2617 2687 1.467342 CTAACCCTTTTGTGTAGCGCC 59.533 52.381 2.29 0.00 0.00 6.53
2618 2688 1.176619 AACCCTTTTGTGTAGCGCCC 61.177 55.000 2.29 0.00 0.00 6.13
2619 2689 2.686816 CCCTTTTGTGTAGCGCCCG 61.687 63.158 2.29 0.00 0.00 6.13
2620 2690 2.175811 CTTTTGTGTAGCGCCCGC 59.824 61.111 2.29 4.20 42.33 6.13
2621 2691 3.322706 CTTTTGTGTAGCGCCCGCC 62.323 63.158 2.29 0.00 43.17 6.13
2622 2692 4.627801 TTTGTGTAGCGCCCGCCA 62.628 61.111 2.29 0.00 43.17 5.69
2654 2724 3.833645 CCTACGGTGCAGCGCCTA 61.834 66.667 35.78 21.25 0.00 3.93
2655 2725 2.278857 CTACGGTGCAGCGCCTAG 60.279 66.667 35.78 25.87 0.00 3.02
2667 2737 3.878667 GCCTAGCTCCGGGGCATT 61.879 66.667 31.81 12.01 44.69 3.56
2668 2738 2.111878 CCTAGCTCCGGGGCATTG 59.888 66.667 31.81 17.54 34.17 2.82
2669 2739 2.592861 CTAGCTCCGGGGCATTGC 60.593 66.667 31.81 10.51 34.17 3.56
2670 2740 3.405093 CTAGCTCCGGGGCATTGCA 62.405 63.158 31.81 6.75 34.17 4.08
2671 2741 3.697439 TAGCTCCGGGGCATTGCAC 62.697 63.158 31.81 6.67 34.17 4.57
2678 2748 2.964978 GGGCATTGCACCACTGTC 59.035 61.111 11.39 0.00 0.00 3.51
2679 2749 2.639327 GGGCATTGCACCACTGTCC 61.639 63.158 11.39 0.00 32.10 4.02
2680 2750 1.902918 GGCATTGCACCACTGTCCA 60.903 57.895 11.39 0.00 0.00 4.02
2681 2751 1.286880 GCATTGCACCACTGTCCAC 59.713 57.895 3.15 0.00 0.00 4.02
2682 2752 1.959085 CATTGCACCACTGTCCACC 59.041 57.895 0.00 0.00 0.00 4.61
2683 2753 1.600636 ATTGCACCACTGTCCACCG 60.601 57.895 0.00 0.00 0.00 4.94
2684 2754 2.337879 ATTGCACCACTGTCCACCGT 62.338 55.000 0.00 0.00 0.00 4.83
2685 2755 2.972505 GCACCACTGTCCACCGTG 60.973 66.667 0.00 0.00 0.00 4.94
2688 2758 4.248842 CCACTGTCCACCGTGGCA 62.249 66.667 13.19 12.68 43.59 4.92
2689 2759 2.666190 CACTGTCCACCGTGGCAG 60.666 66.667 27.03 27.03 42.96 4.85
2690 2760 4.626081 ACTGTCCACCGTGGCAGC 62.626 66.667 27.90 16.20 41.88 5.25
2729 2799 3.378602 TGCAACGCCTCCGAGCTA 61.379 61.111 0.00 0.00 38.86 3.32
2730 2800 2.583593 GCAACGCCTCCGAGCTAG 60.584 66.667 0.00 0.00 36.58 3.42
2731 2801 2.105128 CAACGCCTCCGAGCTAGG 59.895 66.667 6.52 6.52 38.29 3.02
2753 2823 4.147701 GCACCTGCACTGTGACTT 57.852 55.556 12.86 0.00 41.59 3.01
2754 2824 3.305709 GCACCTGCACTGTGACTTA 57.694 52.632 12.86 0.00 41.59 2.24
2755 2825 1.813513 GCACCTGCACTGTGACTTAT 58.186 50.000 12.86 0.00 41.59 1.73
2756 2826 1.734465 GCACCTGCACTGTGACTTATC 59.266 52.381 12.86 0.00 41.59 1.75
2757 2827 2.350522 CACCTGCACTGTGACTTATCC 58.649 52.381 12.86 0.00 35.74 2.59
2758 2828 1.977854 ACCTGCACTGTGACTTATCCA 59.022 47.619 12.86 0.00 0.00 3.41
2759 2829 2.027745 ACCTGCACTGTGACTTATCCAG 60.028 50.000 12.86 7.12 32.42 3.86
2760 2830 2.005451 CTGCACTGTGACTTATCCAGC 58.995 52.381 12.86 0.00 30.41 4.85
2761 2831 1.339055 TGCACTGTGACTTATCCAGCC 60.339 52.381 12.86 0.00 30.41 4.85
2762 2832 1.339055 GCACTGTGACTTATCCAGCCA 60.339 52.381 12.86 0.00 30.41 4.75
2763 2833 2.350522 CACTGTGACTTATCCAGCCAC 58.649 52.381 0.32 0.00 30.41 5.01
2764 2834 2.027745 CACTGTGACTTATCCAGCCACT 60.028 50.000 0.32 0.00 30.41 4.00
2765 2835 2.639839 ACTGTGACTTATCCAGCCACTT 59.360 45.455 0.00 0.00 30.41 3.16
2766 2836 3.005554 CTGTGACTTATCCAGCCACTTG 58.994 50.000 0.00 0.00 0.00 3.16
2767 2837 2.290260 TGTGACTTATCCAGCCACTTGG 60.290 50.000 0.00 0.00 39.70 3.61
3065 3135 2.091541 CACACTCTCTCACTCTCTCCC 58.908 57.143 0.00 0.00 0.00 4.30
3066 3136 1.005450 ACACTCTCTCACTCTCTCCCC 59.995 57.143 0.00 0.00 0.00 4.81
3067 3137 0.254747 ACTCTCTCACTCTCTCCCCG 59.745 60.000 0.00 0.00 0.00 5.73
3068 3138 0.544223 CTCTCTCACTCTCTCCCCGA 59.456 60.000 0.00 0.00 0.00 5.14
3069 3139 0.544223 TCTCTCACTCTCTCCCCGAG 59.456 60.000 0.00 0.00 41.30 4.63
3070 3140 1.077357 TCTCACTCTCTCCCCGAGC 60.077 63.158 0.00 0.00 39.70 5.03
3071 3141 1.077068 CTCACTCTCTCCCCGAGCT 60.077 63.158 0.00 0.00 39.70 4.09
3072 3142 0.682855 CTCACTCTCTCCCCGAGCTT 60.683 60.000 0.00 0.00 39.70 3.74
3073 3143 0.251832 TCACTCTCTCCCCGAGCTTT 60.252 55.000 0.00 0.00 39.70 3.51
3074 3144 0.108424 CACTCTCTCCCCGAGCTTTG 60.108 60.000 0.00 0.00 39.70 2.77
3075 3145 1.153469 CTCTCTCCCCGAGCTTTGC 60.153 63.158 0.00 0.00 39.70 3.68
3076 3146 2.124942 CTCTCCCCGAGCTTTGCC 60.125 66.667 0.00 0.00 31.99 4.52
3077 3147 3.689002 CTCTCCCCGAGCTTTGCCC 62.689 68.421 0.00 0.00 31.99 5.36
3078 3148 4.803908 CTCCCCGAGCTTTGCCCC 62.804 72.222 0.00 0.00 0.00 5.80
3081 3151 4.803908 CCCGAGCTTTGCCCCCTC 62.804 72.222 0.00 0.00 0.00 4.30
3082 3152 3.721706 CCGAGCTTTGCCCCCTCT 61.722 66.667 0.00 0.00 0.00 3.69
3083 3153 2.124942 CGAGCTTTGCCCCCTCTC 60.125 66.667 0.00 0.00 0.00 3.20
3084 3154 2.273776 GAGCTTTGCCCCCTCTCC 59.726 66.667 0.00 0.00 0.00 3.71
3085 3155 3.342477 AGCTTTGCCCCCTCTCCC 61.342 66.667 0.00 0.00 0.00 4.30
3086 3156 3.661648 GCTTTGCCCCCTCTCCCA 61.662 66.667 0.00 0.00 0.00 4.37
3087 3157 2.356667 CTTTGCCCCCTCTCCCAC 59.643 66.667 0.00 0.00 0.00 4.61
3088 3158 2.121506 TTTGCCCCCTCTCCCACT 60.122 61.111 0.00 0.00 0.00 4.00
3089 3159 2.203549 CTTTGCCCCCTCTCCCACTC 62.204 65.000 0.00 0.00 0.00 3.51
3090 3160 2.713111 TTTGCCCCCTCTCCCACTCT 62.713 60.000 0.00 0.00 0.00 3.24
3091 3161 2.766229 GCCCCCTCTCCCACTCTC 60.766 72.222 0.00 0.00 0.00 3.20
3092 3162 2.041405 CCCCCTCTCCCACTCTCC 60.041 72.222 0.00 0.00 0.00 3.71
3093 3163 2.041405 CCCCTCTCCCACTCTCCC 60.041 72.222 0.00 0.00 0.00 4.30
3094 3164 2.041405 CCCTCTCCCACTCTCCCC 60.041 72.222 0.00 0.00 0.00 4.81
3095 3165 2.041405 CCTCTCCCACTCTCCCCC 60.041 72.222 0.00 0.00 0.00 5.40
3112 3182 3.289407 CCCCCTCTCAAATCTTCTTCC 57.711 52.381 0.00 0.00 0.00 3.46
3113 3183 2.578021 CCCCCTCTCAAATCTTCTTCCA 59.422 50.000 0.00 0.00 0.00 3.53
3114 3184 3.010584 CCCCCTCTCAAATCTTCTTCCAA 59.989 47.826 0.00 0.00 0.00 3.53
3115 3185 4.509122 CCCCCTCTCAAATCTTCTTCCAAA 60.509 45.833 0.00 0.00 0.00 3.28
3116 3186 5.267587 CCCCTCTCAAATCTTCTTCCAAAT 58.732 41.667 0.00 0.00 0.00 2.32
3117 3187 5.359292 CCCCTCTCAAATCTTCTTCCAAATC 59.641 44.000 0.00 0.00 0.00 2.17
3118 3188 6.186234 CCCTCTCAAATCTTCTTCCAAATCT 58.814 40.000 0.00 0.00 0.00 2.40
3119 3189 6.662663 CCCTCTCAAATCTTCTTCCAAATCTT 59.337 38.462 0.00 0.00 0.00 2.40
3120 3190 7.362747 CCCTCTCAAATCTTCTTCCAAATCTTG 60.363 40.741 0.00 0.00 0.00 3.02
3121 3191 6.917533 TCTCAAATCTTCTTCCAAATCTTGC 58.082 36.000 0.00 0.00 0.00 4.01
3122 3192 6.491062 TCTCAAATCTTCTTCCAAATCTTGCA 59.509 34.615 0.00 0.00 0.00 4.08
3123 3193 7.014518 TCTCAAATCTTCTTCCAAATCTTGCAA 59.985 33.333 0.00 0.00 0.00 4.08
3124 3194 7.499292 TCAAATCTTCTTCCAAATCTTGCAAA 58.501 30.769 0.00 0.00 0.00 3.68
3125 3195 8.152246 TCAAATCTTCTTCCAAATCTTGCAAAT 58.848 29.630 0.00 0.00 0.00 2.32
3126 3196 8.780249 CAAATCTTCTTCCAAATCTTGCAAATT 58.220 29.630 0.00 0.89 0.00 1.82
3127 3197 8.913487 AATCTTCTTCCAAATCTTGCAAATTT 57.087 26.923 0.00 7.12 0.00 1.82
3128 3198 7.718272 TCTTCTTCCAAATCTTGCAAATTTG 57.282 32.000 24.72 24.72 41.60 2.32
3129 3199 7.499292 TCTTCTTCCAAATCTTGCAAATTTGA 58.501 30.769 28.95 19.68 43.60 2.69
3130 3200 7.986320 TCTTCTTCCAAATCTTGCAAATTTGAA 59.014 29.630 28.95 22.72 43.60 2.69
3131 3201 7.718272 TCTTCCAAATCTTGCAAATTTGAAG 57.282 32.000 28.95 26.71 43.60 3.02
3132 3202 7.499292 TCTTCCAAATCTTGCAAATTTGAAGA 58.501 30.769 28.95 27.63 43.60 2.87
3133 3203 7.986320 TCTTCCAAATCTTGCAAATTTGAAGAA 59.014 29.630 28.95 24.46 43.60 2.52
3134 3204 8.680039 TTCCAAATCTTGCAAATTTGAAGAAT 57.320 26.923 28.95 15.77 43.60 2.40
3135 3205 8.680039 TCCAAATCTTGCAAATTTGAAGAATT 57.320 26.923 28.95 19.63 43.60 2.17
3136 3206 9.122779 TCCAAATCTTGCAAATTTGAAGAATTT 57.877 25.926 28.95 16.07 43.60 1.82
3137 3207 9.176181 CCAAATCTTGCAAATTTGAAGAATTTG 57.824 29.630 28.95 24.78 43.60 2.32
3138 3208 9.724839 CAAATCTTGCAAATTTGAAGAATTTGT 57.275 25.926 26.11 13.50 44.92 2.83
3139 3209 9.940166 AAATCTTGCAAATTTGAAGAATTTGTC 57.060 25.926 22.31 14.18 44.92 3.18
3140 3210 7.481275 TCTTGCAAATTTGAAGAATTTGTCC 57.519 32.000 22.31 9.19 44.92 4.02
3141 3211 5.903764 TGCAAATTTGAAGAATTTGTCCG 57.096 34.783 22.31 0.00 44.92 4.79
3142 3212 5.355596 TGCAAATTTGAAGAATTTGTCCGT 58.644 33.333 22.31 0.00 44.92 4.69
3143 3213 5.233902 TGCAAATTTGAAGAATTTGTCCGTG 59.766 36.000 22.31 0.00 44.92 4.94
3144 3214 5.333263 GCAAATTTGAAGAATTTGTCCGTGG 60.333 40.000 22.31 0.00 44.92 4.94
3145 3215 5.782893 AATTTGAAGAATTTGTCCGTGGA 57.217 34.783 0.00 0.00 0.00 4.02
3146 3216 5.982890 ATTTGAAGAATTTGTCCGTGGAT 57.017 34.783 0.00 0.00 0.00 3.41
3147 3217 5.782893 TTTGAAGAATTTGTCCGTGGATT 57.217 34.783 0.00 0.00 0.00 3.01
3148 3218 5.782893 TTGAAGAATTTGTCCGTGGATTT 57.217 34.783 0.00 0.00 0.00 2.17
3149 3219 5.371115 TGAAGAATTTGTCCGTGGATTTC 57.629 39.130 0.00 0.00 0.00 2.17
3150 3220 4.083537 TGAAGAATTTGTCCGTGGATTTCG 60.084 41.667 0.00 0.00 0.00 3.46
3151 3221 3.670625 AGAATTTGTCCGTGGATTTCGA 58.329 40.909 0.00 0.00 0.00 3.71
3152 3222 4.069304 AGAATTTGTCCGTGGATTTCGAA 58.931 39.130 0.00 0.00 0.00 3.71
3153 3223 4.154195 AGAATTTGTCCGTGGATTTCGAAG 59.846 41.667 0.00 0.00 0.00 3.79
3154 3224 2.536761 TTGTCCGTGGATTTCGAAGT 57.463 45.000 0.00 0.00 0.00 3.01
3155 3225 2.074547 TGTCCGTGGATTTCGAAGTC 57.925 50.000 11.92 11.92 0.00 3.01
3156 3226 1.341852 TGTCCGTGGATTTCGAAGTCA 59.658 47.619 20.53 7.83 0.00 3.41
3157 3227 2.224090 TGTCCGTGGATTTCGAAGTCAA 60.224 45.455 20.53 8.30 0.00 3.18
3158 3228 2.803956 GTCCGTGGATTTCGAAGTCAAA 59.196 45.455 20.53 7.03 0.00 2.69
3159 3229 2.803956 TCCGTGGATTTCGAAGTCAAAC 59.196 45.455 20.53 16.21 0.00 2.93
3160 3230 2.095919 CCGTGGATTTCGAAGTCAAACC 60.096 50.000 20.53 6.14 0.00 3.27
3161 3231 2.095919 CGTGGATTTCGAAGTCAAACCC 60.096 50.000 20.53 5.80 0.00 4.11
3162 3232 3.146847 GTGGATTTCGAAGTCAAACCCT 58.853 45.455 20.53 0.00 0.00 4.34
3163 3233 3.188667 GTGGATTTCGAAGTCAAACCCTC 59.811 47.826 20.53 3.91 0.00 4.30
3164 3234 2.747989 GGATTTCGAAGTCAAACCCTCC 59.252 50.000 20.53 0.00 0.00 4.30
3165 3235 2.265589 TTTCGAAGTCAAACCCTCCC 57.734 50.000 0.00 0.00 0.00 4.30
3166 3236 1.430992 TTCGAAGTCAAACCCTCCCT 58.569 50.000 0.00 0.00 0.00 4.20
3167 3237 0.974383 TCGAAGTCAAACCCTCCCTC 59.026 55.000 0.00 0.00 0.00 4.30
3168 3238 0.685097 CGAAGTCAAACCCTCCCTCA 59.315 55.000 0.00 0.00 0.00 3.86
3169 3239 1.071699 CGAAGTCAAACCCTCCCTCAA 59.928 52.381 0.00 0.00 0.00 3.02
3170 3240 2.784347 GAAGTCAAACCCTCCCTCAAG 58.216 52.381 0.00 0.00 0.00 3.02
3171 3241 1.068121 AGTCAAACCCTCCCTCAAGG 58.932 55.000 0.00 0.00 36.08 3.61
3172 3242 0.771755 GTCAAACCCTCCCTCAAGGT 59.228 55.000 0.00 0.00 36.75 3.50
3173 3243 1.982958 GTCAAACCCTCCCTCAAGGTA 59.017 52.381 0.00 0.00 36.75 3.08
3174 3244 2.374170 GTCAAACCCTCCCTCAAGGTAA 59.626 50.000 0.00 0.00 36.75 2.85
3175 3245 3.010250 GTCAAACCCTCCCTCAAGGTAAT 59.990 47.826 0.00 0.00 36.75 1.89
3176 3246 4.226620 GTCAAACCCTCCCTCAAGGTAATA 59.773 45.833 0.00 0.00 36.75 0.98
3177 3247 4.853276 TCAAACCCTCCCTCAAGGTAATAA 59.147 41.667 0.00 0.00 36.75 1.40
3178 3248 5.494706 TCAAACCCTCCCTCAAGGTAATAAT 59.505 40.000 0.00 0.00 36.75 1.28
3179 3249 5.648330 AACCCTCCCTCAAGGTAATAATC 57.352 43.478 0.00 0.00 36.75 1.75
3180 3250 4.909284 ACCCTCCCTCAAGGTAATAATCT 58.091 43.478 0.00 0.00 36.75 2.40
3181 3251 4.908481 ACCCTCCCTCAAGGTAATAATCTC 59.092 45.833 0.00 0.00 36.75 2.75
3182 3252 4.287326 CCCTCCCTCAAGGTAATAATCTCC 59.713 50.000 0.00 0.00 36.75 3.71
3183 3253 4.021016 CCTCCCTCAAGGTAATAATCTCCG 60.021 50.000 0.00 0.00 36.75 4.63
3184 3254 4.811498 TCCCTCAAGGTAATAATCTCCGA 58.189 43.478 0.00 0.00 36.75 4.55
3185 3255 5.403512 TCCCTCAAGGTAATAATCTCCGAT 58.596 41.667 0.00 0.00 36.75 4.18
3186 3256 5.480772 TCCCTCAAGGTAATAATCTCCGATC 59.519 44.000 0.00 0.00 36.75 3.69
3187 3257 5.337652 CCCTCAAGGTAATAATCTCCGATCC 60.338 48.000 0.00 0.00 0.00 3.36
3188 3258 5.337652 CCTCAAGGTAATAATCTCCGATCCC 60.338 48.000 0.00 0.00 0.00 3.85
3189 3259 4.530946 TCAAGGTAATAATCTCCGATCCCC 59.469 45.833 0.00 0.00 0.00 4.81
3190 3260 4.421574 AGGTAATAATCTCCGATCCCCT 57.578 45.455 0.00 0.00 0.00 4.79
3191 3261 4.764491 AGGTAATAATCTCCGATCCCCTT 58.236 43.478 0.00 0.00 0.00 3.95
3192 3262 4.532521 AGGTAATAATCTCCGATCCCCTTG 59.467 45.833 0.00 0.00 0.00 3.61
3193 3263 4.286291 GGTAATAATCTCCGATCCCCTTGT 59.714 45.833 0.00 0.00 0.00 3.16
3194 3264 5.221864 GGTAATAATCTCCGATCCCCTTGTT 60.222 44.000 0.00 0.00 0.00 2.83
3195 3265 5.388599 AATAATCTCCGATCCCCTTGTTT 57.611 39.130 0.00 0.00 0.00 2.83
3196 3266 3.739401 AATCTCCGATCCCCTTGTTTT 57.261 42.857 0.00 0.00 0.00 2.43
3197 3267 2.489938 TCTCCGATCCCCTTGTTTTG 57.510 50.000 0.00 0.00 0.00 2.44
3198 3268 1.982226 TCTCCGATCCCCTTGTTTTGA 59.018 47.619 0.00 0.00 0.00 2.69
3199 3269 2.576191 TCTCCGATCCCCTTGTTTTGAT 59.424 45.455 0.00 0.00 0.00 2.57
3200 3270 2.945668 CTCCGATCCCCTTGTTTTGATC 59.054 50.000 0.00 0.00 0.00 2.92
3204 3274 4.622701 GATCCCCTTGTTTTGATCGAAG 57.377 45.455 0.00 0.00 0.00 3.79
3205 3275 3.502123 TCCCCTTGTTTTGATCGAAGT 57.498 42.857 0.00 0.00 0.00 3.01
3206 3276 4.627284 TCCCCTTGTTTTGATCGAAGTA 57.373 40.909 0.00 0.00 0.00 2.24
3207 3277 4.975631 TCCCCTTGTTTTGATCGAAGTAA 58.024 39.130 0.00 0.00 0.00 2.24
3208 3278 5.378332 TCCCCTTGTTTTGATCGAAGTAAA 58.622 37.500 0.00 0.00 0.00 2.01
3209 3279 5.472137 TCCCCTTGTTTTGATCGAAGTAAAG 59.528 40.000 0.00 2.17 0.00 1.85
3210 3280 5.240844 CCCCTTGTTTTGATCGAAGTAAAGT 59.759 40.000 0.00 0.00 0.00 2.66
3211 3281 6.238925 CCCCTTGTTTTGATCGAAGTAAAGTT 60.239 38.462 0.00 0.00 0.00 2.66
3212 3282 6.856426 CCCTTGTTTTGATCGAAGTAAAGTTC 59.144 38.462 0.00 0.00 0.00 3.01
3213 3283 7.255139 CCCTTGTTTTGATCGAAGTAAAGTTCT 60.255 37.037 0.00 0.00 0.00 3.01
3214 3284 7.798982 CCTTGTTTTGATCGAAGTAAAGTTCTC 59.201 37.037 0.00 0.00 0.00 2.87
3215 3285 7.186021 TGTTTTGATCGAAGTAAAGTTCTCC 57.814 36.000 0.00 0.00 0.00 3.71
3216 3286 6.204108 TGTTTTGATCGAAGTAAAGTTCTCCC 59.796 38.462 0.00 0.00 0.00 4.30
3217 3287 5.477607 TTGATCGAAGTAAAGTTCTCCCA 57.522 39.130 0.00 0.00 0.00 4.37
3218 3288 5.677319 TGATCGAAGTAAAGTTCTCCCAT 57.323 39.130 0.00 0.00 0.00 4.00
3219 3289 6.049955 TGATCGAAGTAAAGTTCTCCCATT 57.950 37.500 0.00 0.00 0.00 3.16
3220 3290 5.874810 TGATCGAAGTAAAGTTCTCCCATTG 59.125 40.000 0.00 0.00 0.00 2.82
3221 3291 4.000988 TCGAAGTAAAGTTCTCCCATTGC 58.999 43.478 0.00 0.00 0.00 3.56
3222 3292 4.003648 CGAAGTAAAGTTCTCCCATTGCT 58.996 43.478 0.00 0.00 0.00 3.91
3223 3293 4.093556 CGAAGTAAAGTTCTCCCATTGCTC 59.906 45.833 0.00 0.00 0.00 4.26
3224 3294 4.640771 AGTAAAGTTCTCCCATTGCTCA 57.359 40.909 0.00 0.00 0.00 4.26
3225 3295 5.184892 AGTAAAGTTCTCCCATTGCTCAT 57.815 39.130 0.00 0.00 0.00 2.90
3226 3296 5.574188 AGTAAAGTTCTCCCATTGCTCATT 58.426 37.500 0.00 0.00 0.00 2.57
3227 3297 6.012745 AGTAAAGTTCTCCCATTGCTCATTT 58.987 36.000 0.00 0.00 0.00 2.32
3228 3298 4.796038 AAGTTCTCCCATTGCTCATTTG 57.204 40.909 0.00 0.00 0.00 2.32
3229 3299 3.771216 AGTTCTCCCATTGCTCATTTGT 58.229 40.909 0.00 0.00 0.00 2.83
3230 3300 4.154942 AGTTCTCCCATTGCTCATTTGTT 58.845 39.130 0.00 0.00 0.00 2.83
3231 3301 4.021719 AGTTCTCCCATTGCTCATTTGTTG 60.022 41.667 0.00 0.00 0.00 3.33
3232 3302 2.827322 TCTCCCATTGCTCATTTGTTGG 59.173 45.455 0.00 0.00 0.00 3.77
3233 3303 2.564062 CTCCCATTGCTCATTTGTTGGT 59.436 45.455 0.00 0.00 0.00 3.67
3234 3304 3.763360 CTCCCATTGCTCATTTGTTGGTA 59.237 43.478 0.00 0.00 0.00 3.25
3235 3305 3.763360 TCCCATTGCTCATTTGTTGGTAG 59.237 43.478 0.00 0.00 0.00 3.18
3236 3306 3.511146 CCCATTGCTCATTTGTTGGTAGT 59.489 43.478 0.00 0.00 0.00 2.73
3237 3307 4.021192 CCCATTGCTCATTTGTTGGTAGTT 60.021 41.667 0.00 0.00 0.00 2.24
3238 3308 5.511202 CCCATTGCTCATTTGTTGGTAGTTT 60.511 40.000 0.00 0.00 0.00 2.66
3239 3309 5.406175 CCATTGCTCATTTGTTGGTAGTTTG 59.594 40.000 0.00 0.00 0.00 2.93
3240 3310 4.582701 TGCTCATTTGTTGGTAGTTTGG 57.417 40.909 0.00 0.00 0.00 3.28
3241 3311 3.320541 TGCTCATTTGTTGGTAGTTTGGG 59.679 43.478 0.00 0.00 0.00 4.12
3242 3312 3.306019 GCTCATTTGTTGGTAGTTTGGGG 60.306 47.826 0.00 0.00 0.00 4.96
3243 3313 4.148838 CTCATTTGTTGGTAGTTTGGGGA 58.851 43.478 0.00 0.00 0.00 4.81
3244 3314 4.547671 TCATTTGTTGGTAGTTTGGGGAA 58.452 39.130 0.00 0.00 0.00 3.97
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 6.656945 GCATAGTGAACTTTATGCTCATGAG 58.343 40.000 18.84 18.84 45.40 2.90
4 5 6.609237 GCATAGTGAACTTTATGCTCATGA 57.391 37.500 9.84 0.00 45.40 3.07
31 32 9.811995 GACATGTGGTTCTATTGTAAGTATACA 57.188 33.333 1.15 0.00 40.24 2.29
32 33 9.811995 TGACATGTGGTTCTATTGTAAGTATAC 57.188 33.333 1.15 0.00 0.00 1.47
34 35 8.540388 ACTGACATGTGGTTCTATTGTAAGTAT 58.460 33.333 1.15 0.00 31.62 2.12
35 36 7.903145 ACTGACATGTGGTTCTATTGTAAGTA 58.097 34.615 1.15 0.00 31.62 2.24
36 37 6.769512 ACTGACATGTGGTTCTATTGTAAGT 58.230 36.000 1.15 0.00 29.04 2.24
37 38 7.672983 AACTGACATGTGGTTCTATTGTAAG 57.327 36.000 1.15 0.00 0.00 2.34
38 39 8.458573 AAAACTGACATGTGGTTCTATTGTAA 57.541 30.769 1.15 0.00 0.00 2.41
39 40 7.174253 GGAAAACTGACATGTGGTTCTATTGTA 59.826 37.037 1.15 0.00 0.00 2.41
40 41 6.016276 GGAAAACTGACATGTGGTTCTATTGT 60.016 38.462 1.15 0.00 0.00 2.71
41 42 6.016360 TGGAAAACTGACATGTGGTTCTATTG 60.016 38.462 1.15 0.00 0.00 1.90
42 43 6.068010 TGGAAAACTGACATGTGGTTCTATT 58.932 36.000 1.15 0.07 0.00 1.73
43 44 5.630121 TGGAAAACTGACATGTGGTTCTAT 58.370 37.500 1.15 0.00 0.00 1.98
44 45 5.042463 TGGAAAACTGACATGTGGTTCTA 57.958 39.130 1.15 0.00 0.00 2.10
45 46 3.897239 TGGAAAACTGACATGTGGTTCT 58.103 40.909 1.15 0.00 0.00 3.01
46 47 4.853924 ATGGAAAACTGACATGTGGTTC 57.146 40.909 1.15 0.00 0.00 3.62
47 48 4.261572 CGAATGGAAAACTGACATGTGGTT 60.262 41.667 1.15 5.48 0.00 3.67
48 49 3.253188 CGAATGGAAAACTGACATGTGGT 59.747 43.478 1.15 0.00 0.00 4.16
49 50 3.366273 CCGAATGGAAAACTGACATGTGG 60.366 47.826 1.15 0.00 37.49 4.17
50 51 3.825308 CCGAATGGAAAACTGACATGTG 58.175 45.455 1.15 0.00 37.49 3.21
51 52 2.228822 GCCGAATGGAAAACTGACATGT 59.771 45.455 0.00 0.00 37.49 3.21
52 53 2.228582 TGCCGAATGGAAAACTGACATG 59.771 45.455 0.00 0.00 37.49 3.21
53 54 2.228822 GTGCCGAATGGAAAACTGACAT 59.771 45.455 0.00 0.00 37.49 3.06
54 55 1.606668 GTGCCGAATGGAAAACTGACA 59.393 47.619 0.00 0.00 37.49 3.58
55 56 1.880027 AGTGCCGAATGGAAAACTGAC 59.120 47.619 0.00 0.00 37.49 3.51
56 57 2.270352 AGTGCCGAATGGAAAACTGA 57.730 45.000 0.00 0.00 37.49 3.41
57 58 4.414852 CATTAGTGCCGAATGGAAAACTG 58.585 43.478 0.00 0.00 37.49 3.16
58 59 4.701956 CATTAGTGCCGAATGGAAAACT 57.298 40.909 0.00 0.00 37.49 2.66
65 66 1.331756 GCTCACCATTAGTGCCGAATG 59.668 52.381 0.00 2.51 46.81 2.67
66 67 1.210478 AGCTCACCATTAGTGCCGAAT 59.790 47.619 0.00 0.00 46.81 3.34
67 68 0.613260 AGCTCACCATTAGTGCCGAA 59.387 50.000 0.00 0.00 46.81 4.30
68 69 1.480789 TAGCTCACCATTAGTGCCGA 58.519 50.000 0.00 0.00 46.81 5.54
69 70 2.036475 AGATAGCTCACCATTAGTGCCG 59.964 50.000 0.00 0.00 46.81 5.69
70 71 3.070159 TGAGATAGCTCACCATTAGTGCC 59.930 47.826 6.59 0.00 45.88 5.01
71 72 4.327982 TGAGATAGCTCACCATTAGTGC 57.672 45.455 6.59 0.00 45.88 4.40
82 83 6.913170 TGGTTCATTGTTTTTGAGATAGCTC 58.087 36.000 0.00 0.00 41.67 4.09
83 84 6.899393 TGGTTCATTGTTTTTGAGATAGCT 57.101 33.333 0.00 0.00 0.00 3.32
84 85 7.945033 TTTGGTTCATTGTTTTTGAGATAGC 57.055 32.000 0.00 0.00 0.00 2.97
85 86 9.480053 ACATTTGGTTCATTGTTTTTGAGATAG 57.520 29.630 0.00 0.00 0.00 2.08
86 87 9.829507 AACATTTGGTTCATTGTTTTTGAGATA 57.170 25.926 0.00 0.00 33.35 1.98
87 88 8.735692 AACATTTGGTTCATTGTTTTTGAGAT 57.264 26.923 0.00 0.00 33.35 2.75
88 89 9.311916 CTAACATTTGGTTCATTGTTTTTGAGA 57.688 29.630 0.00 0.00 40.96 3.27
89 90 9.097257 ACTAACATTTGGTTCATTGTTTTTGAG 57.903 29.630 0.00 0.00 40.96 3.02
90 91 9.442047 AACTAACATTTGGTTCATTGTTTTTGA 57.558 25.926 0.00 0.00 40.96 2.69
91 92 9.701355 GAACTAACATTTGGTTCATTGTTTTTG 57.299 29.630 9.52 0.00 46.54 2.44
101 102 6.592607 TGTATCTCCGAACTAACATTTGGTTC 59.407 38.462 5.36 5.36 44.65 3.62
102 103 6.469410 TGTATCTCCGAACTAACATTTGGTT 58.531 36.000 0.00 0.00 43.62 3.67
103 104 6.045072 TGTATCTCCGAACTAACATTTGGT 57.955 37.500 0.00 0.00 34.97 3.67
104 105 6.338146 TCTGTATCTCCGAACTAACATTTGG 58.662 40.000 0.00 0.00 34.73 3.28
105 106 7.036220 ACTCTGTATCTCCGAACTAACATTTG 58.964 38.462 0.00 0.00 0.00 2.32
106 107 7.171630 ACTCTGTATCTCCGAACTAACATTT 57.828 36.000 0.00 0.00 0.00 2.32
107 108 6.777213 ACTCTGTATCTCCGAACTAACATT 57.223 37.500 0.00 0.00 0.00 2.71
108 109 7.013464 CCTTACTCTGTATCTCCGAACTAACAT 59.987 40.741 0.00 0.00 0.00 2.71
109 110 6.318144 CCTTACTCTGTATCTCCGAACTAACA 59.682 42.308 0.00 0.00 0.00 2.41
110 111 6.727215 CCTTACTCTGTATCTCCGAACTAAC 58.273 44.000 0.00 0.00 0.00 2.34
111 112 6.939132 CCTTACTCTGTATCTCCGAACTAA 57.061 41.667 0.00 0.00 0.00 2.24
206 207 6.455360 TCTTCAAATTAGCACATGATTCCC 57.545 37.500 0.00 0.00 0.00 3.97
207 208 8.031277 ACTTTCTTCAAATTAGCACATGATTCC 58.969 33.333 0.00 0.00 0.00 3.01
208 209 8.976986 ACTTTCTTCAAATTAGCACATGATTC 57.023 30.769 0.00 0.00 0.00 2.52
231 232 9.629649 TCCCAGGTATCCATTTAGATATTTACT 57.370 33.333 0.00 0.00 31.59 2.24
238 239 9.981460 GATATTTTCCCAGGTATCCATTTAGAT 57.019 33.333 0.00 0.00 0.00 1.98
239 240 9.182642 AGATATTTTCCCAGGTATCCATTTAGA 57.817 33.333 0.00 0.00 0.00 2.10
274 275 8.585471 ATTCATGGACATTATGTTATCCATCC 57.415 34.615 12.35 2.82 46.83 3.51
292 293 3.081804 GGCGAGGGGTAATAATTCATGG 58.918 50.000 0.00 0.00 0.00 3.66
316 317 7.213678 TGAATCCCTCCAACAAAACATTAAAC 58.786 34.615 0.00 0.00 0.00 2.01
317 318 7.366847 TGAATCCCTCCAACAAAACATTAAA 57.633 32.000 0.00 0.00 0.00 1.52
318 319 6.985653 TGAATCCCTCCAACAAAACATTAA 57.014 33.333 0.00 0.00 0.00 1.40
319 320 6.127758 CGATGAATCCCTCCAACAAAACATTA 60.128 38.462 0.00 0.00 0.00 1.90
320 321 5.336690 CGATGAATCCCTCCAACAAAACATT 60.337 40.000 0.00 0.00 0.00 2.71
321 322 4.158394 CGATGAATCCCTCCAACAAAACAT 59.842 41.667 0.00 0.00 0.00 2.71
322 323 3.505680 CGATGAATCCCTCCAACAAAACA 59.494 43.478 0.00 0.00 0.00 2.83
323 324 3.506067 ACGATGAATCCCTCCAACAAAAC 59.494 43.478 0.00 0.00 0.00 2.43
388 389 5.355071 TGCTTATCTAGATTGCCTTGTGTTG 59.645 40.000 11.25 0.00 0.00 3.33
391 392 5.180868 GGATGCTTATCTAGATTGCCTTGTG 59.819 44.000 11.25 0.00 0.00 3.33
490 496 2.033602 CCTCCCCTTTTCGCCGTT 59.966 61.111 0.00 0.00 0.00 4.44
594 610 2.732619 CGAGGGGCAGGGGTAGAAC 61.733 68.421 0.00 0.00 0.00 3.01
595 611 2.365105 CGAGGGGCAGGGGTAGAA 60.365 66.667 0.00 0.00 0.00 2.10
596 612 4.475444 CCGAGGGGCAGGGGTAGA 62.475 72.222 0.00 0.00 0.00 2.59
597 613 4.798682 ACCGAGGGGCAGGGGTAG 62.799 72.222 0.00 0.00 36.48 3.18
598 614 4.791069 GACCGAGGGGCAGGGGTA 62.791 72.222 0.00 0.00 36.48 3.69
666 682 7.271223 CGTCAAATCAACATGTGTATCTTTTCC 59.729 37.037 0.00 0.00 0.00 3.13
681 697 1.234821 TGGGTCAGCGTCAAATCAAC 58.765 50.000 0.00 0.00 0.00 3.18
712 728 2.092323 CGACTCAGGACTGATACCACA 58.908 52.381 2.00 0.00 39.13 4.17
772 788 0.617249 AGACTTGAGCTGGAGGGAGG 60.617 60.000 0.00 0.00 0.00 4.30
775 791 0.979665 TCAAGACTTGAGCTGGAGGG 59.020 55.000 13.99 0.00 34.08 4.30
777 793 2.805099 GTGTTCAAGACTTGAGCTGGAG 59.195 50.000 26.19 0.00 40.93 3.86
778 794 2.170397 TGTGTTCAAGACTTGAGCTGGA 59.830 45.455 26.19 9.36 40.93 3.86
779 795 2.564771 TGTGTTCAAGACTTGAGCTGG 58.435 47.619 26.19 0.00 40.93 4.85
791 807 3.775202 CGATTGGTTGGTTTGTGTTCAA 58.225 40.909 0.00 0.00 0.00 2.69
793 809 2.124122 GCGATTGGTTGGTTTGTGTTC 58.876 47.619 0.00 0.00 0.00 3.18
832 850 4.439901 GAGGGGAAGGGGAGGGCT 62.440 72.222 0.00 0.00 0.00 5.19
877 895 9.872721 GAGAAACTAAAACTAGCAGGTAGTAAT 57.127 33.333 12.74 7.46 41.50 1.89
878 896 8.025445 CGAGAAACTAAAACTAGCAGGTAGTAA 58.975 37.037 12.74 1.66 41.50 2.24
879 897 7.175641 ACGAGAAACTAAAACTAGCAGGTAGTA 59.824 37.037 12.74 0.00 41.50 1.82
1005 1045 1.298157 CCTTGATGAAACTCGCGGCA 61.298 55.000 6.13 0.00 0.00 5.69
2365 2429 9.980780 CACGATTTTACATGTATTATGACAACA 57.019 29.630 6.36 0.00 31.83 3.33
2366 2430 8.943925 GCACGATTTTACATGTATTATGACAAC 58.056 33.333 6.36 0.00 31.83 3.32
2406 2470 1.155889 TTCCACTGCACTGCGTATTG 58.844 50.000 0.00 0.00 0.00 1.90
2418 2488 4.023980 TCTCACAGGGTACTATTCCACTG 58.976 47.826 0.00 0.00 33.05 3.66
2420 2490 5.597182 TGTATCTCACAGGGTACTATTCCAC 59.403 44.000 0.00 0.00 31.89 4.02
2422 2492 6.550108 TCTTGTATCTCACAGGGTACTATTCC 59.450 42.308 0.00 0.00 38.72 3.01
2423 2493 7.584122 TCTTGTATCTCACAGGGTACTATTC 57.416 40.000 0.00 0.00 38.72 1.75
2424 2494 7.785028 TCATCTTGTATCTCACAGGGTACTATT 59.215 37.037 0.00 0.00 38.72 1.73
2425 2495 7.298374 TCATCTTGTATCTCACAGGGTACTAT 58.702 38.462 0.00 0.00 38.72 2.12
2426 2496 6.669631 TCATCTTGTATCTCACAGGGTACTA 58.330 40.000 0.00 0.00 38.72 1.82
2427 2497 5.519808 TCATCTTGTATCTCACAGGGTACT 58.480 41.667 0.00 0.00 38.72 2.73
2428 2498 5.854010 TCATCTTGTATCTCACAGGGTAC 57.146 43.478 0.00 0.00 38.72 3.34
2446 2516 2.094894 CAGGCAACGACATGAGTTCATC 59.905 50.000 0.00 0.00 46.39 2.92
2480 2550 1.021968 GTTTGAGCCCGACAAGTTGT 58.978 50.000 8.61 8.61 0.00 3.32
2501 2571 2.224354 CCCACAAATTCCTTGCAGCTTT 60.224 45.455 0.00 0.00 38.75 3.51
2505 2575 0.037046 GCCCCACAAATTCCTTGCAG 60.037 55.000 0.00 0.00 38.75 4.41
2522 2592 4.364860 AGGTTAACGTTGTCAAATTTGCC 58.635 39.130 11.99 2.32 0.00 4.52
2523 2593 8.730970 TTATAGGTTAACGTTGTCAAATTTGC 57.269 30.769 11.99 9.16 0.00 3.68
2525 2595 9.763465 CGATTATAGGTTAACGTTGTCAAATTT 57.237 29.630 11.99 0.00 0.00 1.82
2526 2596 9.153721 TCGATTATAGGTTAACGTTGTCAAATT 57.846 29.630 11.99 0.00 0.00 1.82
2527 2597 8.706492 TCGATTATAGGTTAACGTTGTCAAAT 57.294 30.769 11.99 1.97 0.00 2.32
2528 2598 8.531622 TTCGATTATAGGTTAACGTTGTCAAA 57.468 30.769 11.99 0.00 0.00 2.69
2529 2599 8.531622 TTTCGATTATAGGTTAACGTTGTCAA 57.468 30.769 11.99 0.00 0.00 3.18
2530 2600 7.201461 GCTTTCGATTATAGGTTAACGTTGTCA 60.201 37.037 11.99 0.00 0.00 3.58
2531 2601 7.115553 GCTTTCGATTATAGGTTAACGTTGTC 58.884 38.462 11.99 3.49 0.00 3.18
2532 2602 6.591062 TGCTTTCGATTATAGGTTAACGTTGT 59.409 34.615 11.99 0.00 0.00 3.32
2533 2603 6.996106 TGCTTTCGATTATAGGTTAACGTTG 58.004 36.000 11.99 0.00 0.00 4.10
2534 2604 7.599630 TTGCTTTCGATTATAGGTTAACGTT 57.400 32.000 5.88 5.88 0.00 3.99
2535 2605 7.599630 TTTGCTTTCGATTATAGGTTAACGT 57.400 32.000 6.03 6.03 0.00 3.99
2536 2606 8.332464 TGATTTGCTTTCGATTATAGGTTAACG 58.668 33.333 0.00 0.00 0.00 3.18
2537 2607 9.434559 GTGATTTGCTTTCGATTATAGGTTAAC 57.565 33.333 0.00 0.00 0.00 2.01
2538 2608 9.168451 TGTGATTTGCTTTCGATTATAGGTTAA 57.832 29.630 0.00 0.00 0.00 2.01
2539 2609 8.725405 TGTGATTTGCTTTCGATTATAGGTTA 57.275 30.769 0.00 0.00 0.00 2.85
2540 2610 7.552687 TCTGTGATTTGCTTTCGATTATAGGTT 59.447 33.333 0.00 0.00 0.00 3.50
2541 2611 7.047891 TCTGTGATTTGCTTTCGATTATAGGT 58.952 34.615 0.00 0.00 0.00 3.08
2542 2612 7.482654 TCTGTGATTTGCTTTCGATTATAGG 57.517 36.000 0.00 0.00 0.00 2.57
2543 2613 9.378597 CATTCTGTGATTTGCTTTCGATTATAG 57.621 33.333 0.00 0.00 0.00 1.31
2544 2614 9.108284 TCATTCTGTGATTTGCTTTCGATTATA 57.892 29.630 0.00 0.00 0.00 0.98
2545 2615 7.988737 TCATTCTGTGATTTGCTTTCGATTAT 58.011 30.769 0.00 0.00 0.00 1.28
2546 2616 7.376435 TCATTCTGTGATTTGCTTTCGATTA 57.624 32.000 0.00 0.00 0.00 1.75
2547 2617 6.258230 TCATTCTGTGATTTGCTTTCGATT 57.742 33.333 0.00 0.00 0.00 3.34
2548 2618 5.885230 TCATTCTGTGATTTGCTTTCGAT 57.115 34.783 0.00 0.00 0.00 3.59
2549 2619 5.239306 AGTTCATTCTGTGATTTGCTTTCGA 59.761 36.000 0.00 0.00 36.54 3.71
2550 2620 5.341462 CAGTTCATTCTGTGATTTGCTTTCG 59.659 40.000 0.00 0.00 36.54 3.46
2551 2621 5.632347 CCAGTTCATTCTGTGATTTGCTTTC 59.368 40.000 0.00 0.00 36.54 2.62
2552 2622 5.069516 ACCAGTTCATTCTGTGATTTGCTTT 59.930 36.000 0.00 0.00 36.54 3.51
2553 2623 4.586001 ACCAGTTCATTCTGTGATTTGCTT 59.414 37.500 0.00 0.00 36.54 3.91
2554 2624 4.147321 ACCAGTTCATTCTGTGATTTGCT 58.853 39.130 0.00 0.00 36.54 3.91
2555 2625 4.510038 ACCAGTTCATTCTGTGATTTGC 57.490 40.909 0.00 0.00 36.54 3.68
2556 2626 5.464168 GGAACCAGTTCATTCTGTGATTTG 58.536 41.667 12.32 0.00 41.20 2.32
2557 2627 4.216257 CGGAACCAGTTCATTCTGTGATTT 59.784 41.667 12.32 0.00 41.20 2.17
2558 2628 3.753272 CGGAACCAGTTCATTCTGTGATT 59.247 43.478 12.32 0.00 41.20 2.57
2559 2629 3.007940 TCGGAACCAGTTCATTCTGTGAT 59.992 43.478 12.32 0.00 41.20 3.06
2560 2630 2.367241 TCGGAACCAGTTCATTCTGTGA 59.633 45.455 12.32 0.00 41.20 3.58
2561 2631 2.766313 TCGGAACCAGTTCATTCTGTG 58.234 47.619 12.32 0.00 41.20 3.66
2562 2632 3.485463 TTCGGAACCAGTTCATTCTGT 57.515 42.857 12.32 0.00 41.20 3.41
2563 2633 3.815401 AGTTTCGGAACCAGTTCATTCTG 59.185 43.478 12.32 0.00 41.20 3.02
2564 2634 4.086706 AGTTTCGGAACCAGTTCATTCT 57.913 40.909 12.32 1.31 41.20 2.40
2565 2635 6.496338 AATAGTTTCGGAACCAGTTCATTC 57.504 37.500 12.32 0.00 41.20 2.67
2566 2636 6.488683 TGAAATAGTTTCGGAACCAGTTCATT 59.511 34.615 12.80 0.00 36.86 2.57
2567 2637 6.001460 TGAAATAGTTTCGGAACCAGTTCAT 58.999 36.000 12.80 0.00 36.86 2.57
2568 2638 5.237779 GTGAAATAGTTTCGGAACCAGTTCA 59.762 40.000 12.80 12.80 38.48 3.18
2569 2639 5.237779 TGTGAAATAGTTTCGGAACCAGTTC 59.762 40.000 8.05 8.05 42.55 3.01
2570 2640 5.008316 GTGTGAAATAGTTTCGGAACCAGTT 59.992 40.000 2.02 0.00 42.55 3.16
2571 2641 4.514066 GTGTGAAATAGTTTCGGAACCAGT 59.486 41.667 2.02 0.00 42.55 4.00
2572 2642 4.083484 GGTGTGAAATAGTTTCGGAACCAG 60.083 45.833 2.02 0.00 42.55 4.00
2573 2643 3.816523 GGTGTGAAATAGTTTCGGAACCA 59.183 43.478 2.02 0.00 42.55 3.67
2574 2644 3.189910 GGGTGTGAAATAGTTTCGGAACC 59.810 47.826 2.02 10.23 42.55 3.62
2575 2645 3.189910 GGGGTGTGAAATAGTTTCGGAAC 59.810 47.826 0.00 0.00 42.55 3.62
2576 2646 3.073356 AGGGGTGTGAAATAGTTTCGGAA 59.927 43.478 0.00 0.00 42.55 4.30
2577 2647 2.640826 AGGGGTGTGAAATAGTTTCGGA 59.359 45.455 0.00 0.00 42.55 4.55
2578 2648 3.067684 AGGGGTGTGAAATAGTTTCGG 57.932 47.619 0.00 0.00 42.55 4.30
2579 2649 4.393990 GGTTAGGGGTGTGAAATAGTTTCG 59.606 45.833 0.00 0.00 42.55 3.46
2580 2650 4.703575 GGGTTAGGGGTGTGAAATAGTTTC 59.296 45.833 0.00 0.00 40.08 2.78
2581 2651 4.355889 AGGGTTAGGGGTGTGAAATAGTTT 59.644 41.667 0.00 0.00 0.00 2.66
2582 2652 3.920841 AGGGTTAGGGGTGTGAAATAGTT 59.079 43.478 0.00 0.00 0.00 2.24
2583 2653 3.538387 AGGGTTAGGGGTGTGAAATAGT 58.462 45.455 0.00 0.00 0.00 2.12
2584 2654 4.586306 AAGGGTTAGGGGTGTGAAATAG 57.414 45.455 0.00 0.00 0.00 1.73
2585 2655 5.081032 CAAAAGGGTTAGGGGTGTGAAATA 58.919 41.667 0.00 0.00 0.00 1.40
2586 2656 3.901222 CAAAAGGGTTAGGGGTGTGAAAT 59.099 43.478 0.00 0.00 0.00 2.17
2587 2657 3.301274 CAAAAGGGTTAGGGGTGTGAAA 58.699 45.455 0.00 0.00 0.00 2.69
2588 2658 2.245287 ACAAAAGGGTTAGGGGTGTGAA 59.755 45.455 0.00 0.00 0.00 3.18
2589 2659 1.854280 ACAAAAGGGTTAGGGGTGTGA 59.146 47.619 0.00 0.00 0.00 3.58
2590 2660 1.960689 CACAAAAGGGTTAGGGGTGTG 59.039 52.381 0.00 0.00 0.00 3.82
2591 2661 1.571936 ACACAAAAGGGTTAGGGGTGT 59.428 47.619 0.00 0.00 33.56 4.16
2592 2662 2.375014 ACACAAAAGGGTTAGGGGTG 57.625 50.000 0.00 0.00 0.00 4.61
2593 2663 2.224942 GCTACACAAAAGGGTTAGGGGT 60.225 50.000 0.00 0.00 0.00 4.95
2594 2664 2.443416 GCTACACAAAAGGGTTAGGGG 58.557 52.381 0.00 0.00 0.00 4.79
2595 2665 2.081462 CGCTACACAAAAGGGTTAGGG 58.919 52.381 0.00 0.00 0.00 3.53
2596 2666 1.467342 GCGCTACACAAAAGGGTTAGG 59.533 52.381 0.00 0.00 0.00 2.69
2597 2667 1.467342 GGCGCTACACAAAAGGGTTAG 59.533 52.381 7.64 0.00 0.00 2.34
2598 2668 1.525941 GGCGCTACACAAAAGGGTTA 58.474 50.000 7.64 0.00 0.00 2.85
2599 2669 1.176619 GGGCGCTACACAAAAGGGTT 61.177 55.000 7.64 0.00 0.00 4.11
2600 2670 1.602605 GGGCGCTACACAAAAGGGT 60.603 57.895 7.64 0.00 0.00 4.34
2601 2671 2.686816 CGGGCGCTACACAAAAGGG 61.687 63.158 7.64 0.00 0.00 3.95
2602 2672 2.867472 CGGGCGCTACACAAAAGG 59.133 61.111 7.64 0.00 0.00 3.11
2603 2673 2.175811 GCGGGCGCTACACAAAAG 59.824 61.111 7.64 0.00 38.26 2.27
2604 2674 3.358707 GGCGGGCGCTACACAAAA 61.359 61.111 7.64 0.00 41.60 2.44
2605 2675 4.627801 TGGCGGGCGCTACACAAA 62.628 61.111 7.64 0.00 41.60 2.83
2638 2708 2.278857 CTAGGCGCTGCACCGTAG 60.279 66.667 7.64 2.34 0.00 3.51
2639 2709 4.508128 GCTAGGCGCTGCACCGTA 62.508 66.667 7.64 0.00 35.14 4.02
2651 2721 2.111878 CAATGCCCCGGAGCTAGG 59.888 66.667 10.16 0.00 0.00 3.02
2652 2722 2.592861 GCAATGCCCCGGAGCTAG 60.593 66.667 10.16 0.00 0.00 3.42
2653 2723 3.407083 TGCAATGCCCCGGAGCTA 61.407 61.111 10.16 0.00 0.00 3.32
2656 2726 4.738998 TGGTGCAATGCCCCGGAG 62.739 66.667 0.73 0.00 0.00 4.63
2659 2729 3.751246 CAGTGGTGCAATGCCCCG 61.751 66.667 1.53 0.00 0.00 5.73
2660 2730 2.601367 ACAGTGGTGCAATGCCCC 60.601 61.111 1.53 0.00 32.35 5.80
2661 2731 2.639327 GGACAGTGGTGCAATGCCC 61.639 63.158 1.53 4.17 32.35 5.36
2662 2732 1.902918 TGGACAGTGGTGCAATGCC 60.903 57.895 1.53 0.00 42.81 4.40
2663 2733 3.762293 TGGACAGTGGTGCAATGC 58.238 55.556 0.00 0.00 42.81 3.56
2667 2737 3.475494 ACGGTGGACAGTGGTGCA 61.475 61.111 0.00 0.00 43.61 4.57
2668 2738 2.972505 CACGGTGGACAGTGGTGC 60.973 66.667 0.00 0.00 38.19 5.01
2672 2742 2.666190 CTGCCACGGTGGACAGTG 60.666 66.667 30.65 12.56 40.96 3.66
2673 2743 4.626081 GCTGCCACGGTGGACAGT 62.626 66.667 32.49 0.00 40.96 3.55
2711 2781 3.642778 TAGCTCGGAGGCGTTGCAC 62.643 63.158 7.20 0.00 37.29 4.57
2712 2782 3.356639 CTAGCTCGGAGGCGTTGCA 62.357 63.158 7.20 0.00 37.29 4.08
2713 2783 2.583593 CTAGCTCGGAGGCGTTGC 60.584 66.667 7.20 0.00 37.29 4.17
2714 2784 2.105128 CCTAGCTCGGAGGCGTTG 59.895 66.667 7.20 0.00 37.29 4.10
2736 2806 1.734465 GATAAGTCACAGTGCAGGTGC 59.266 52.381 12.45 8.52 42.50 5.01
2737 2807 2.289631 TGGATAAGTCACAGTGCAGGTG 60.290 50.000 11.31 11.31 37.60 4.00
2738 2808 1.977854 TGGATAAGTCACAGTGCAGGT 59.022 47.619 0.00 0.00 0.00 4.00
2739 2809 2.625737 CTGGATAAGTCACAGTGCAGG 58.374 52.381 0.00 0.00 0.00 4.85
2740 2810 2.005451 GCTGGATAAGTCACAGTGCAG 58.995 52.381 0.00 0.00 34.79 4.41
2741 2811 1.339055 GGCTGGATAAGTCACAGTGCA 60.339 52.381 0.00 0.00 34.79 4.57
2742 2812 1.339055 TGGCTGGATAAGTCACAGTGC 60.339 52.381 0.00 0.00 34.88 4.40
2743 2813 2.768253 TGGCTGGATAAGTCACAGTG 57.232 50.000 0.00 0.00 34.88 3.66
2748 2818 2.787473 CCAAGTGGCTGGATAAGTCA 57.213 50.000 0.00 0.00 38.51 3.41
3045 3115 2.091541 GGGAGAGAGTGAGAGAGTGTG 58.908 57.143 0.00 0.00 0.00 3.82
3046 3116 1.005450 GGGGAGAGAGTGAGAGAGTGT 59.995 57.143 0.00 0.00 0.00 3.55
3047 3117 1.762708 GGGGAGAGAGTGAGAGAGTG 58.237 60.000 0.00 0.00 0.00 3.51
3048 3118 0.254747 CGGGGAGAGAGTGAGAGAGT 59.745 60.000 0.00 0.00 0.00 3.24
3049 3119 0.544223 TCGGGGAGAGAGTGAGAGAG 59.456 60.000 0.00 0.00 0.00 3.20
3050 3120 2.698168 TCGGGGAGAGAGTGAGAGA 58.302 57.895 0.00 0.00 0.00 3.10
3060 3130 3.717294 GGGCAAAGCTCGGGGAGA 61.717 66.667 0.00 0.00 0.00 3.71
3061 3131 4.803908 GGGGCAAAGCTCGGGGAG 62.804 72.222 0.00 0.00 0.00 4.30
3064 3134 4.803908 GAGGGGGCAAAGCTCGGG 62.804 72.222 0.00 0.00 0.00 5.14
3065 3135 3.689002 GAGAGGGGGCAAAGCTCGG 62.689 68.421 0.00 0.00 0.00 4.63
3066 3136 2.124942 GAGAGGGGGCAAAGCTCG 60.125 66.667 0.00 0.00 0.00 5.03
3067 3137 2.273776 GGAGAGGGGGCAAAGCTC 59.726 66.667 0.00 0.00 0.00 4.09
3068 3138 3.342477 GGGAGAGGGGGCAAAGCT 61.342 66.667 0.00 0.00 0.00 3.74
3069 3139 3.661648 TGGGAGAGGGGGCAAAGC 61.662 66.667 0.00 0.00 0.00 3.51
3070 3140 2.203549 GAGTGGGAGAGGGGGCAAAG 62.204 65.000 0.00 0.00 0.00 2.77
3071 3141 2.121506 AGTGGGAGAGGGGGCAAA 60.122 61.111 0.00 0.00 0.00 3.68
3072 3142 2.610859 GAGTGGGAGAGGGGGCAA 60.611 66.667 0.00 0.00 0.00 4.52
3073 3143 3.615811 AGAGTGGGAGAGGGGGCA 61.616 66.667 0.00 0.00 0.00 5.36
3074 3144 2.766229 GAGAGTGGGAGAGGGGGC 60.766 72.222 0.00 0.00 0.00 5.80
3075 3145 2.041405 GGAGAGTGGGAGAGGGGG 60.041 72.222 0.00 0.00 0.00 5.40
3076 3146 2.041405 GGGAGAGTGGGAGAGGGG 60.041 72.222 0.00 0.00 0.00 4.79
3077 3147 2.041405 GGGGAGAGTGGGAGAGGG 60.041 72.222 0.00 0.00 0.00 4.30
3078 3148 2.041405 GGGGGAGAGTGGGAGAGG 60.041 72.222 0.00 0.00 0.00 3.69
3092 3162 2.578021 TGGAAGAAGATTTGAGAGGGGG 59.422 50.000 0.00 0.00 0.00 5.40
3093 3163 4.307032 TTGGAAGAAGATTTGAGAGGGG 57.693 45.455 0.00 0.00 0.00 4.79
3094 3164 6.186234 AGATTTGGAAGAAGATTTGAGAGGG 58.814 40.000 0.00 0.00 0.00 4.30
3095 3165 7.536855 CAAGATTTGGAAGAAGATTTGAGAGG 58.463 38.462 0.00 0.00 0.00 3.69
3096 3166 7.028361 GCAAGATTTGGAAGAAGATTTGAGAG 58.972 38.462 0.00 0.00 0.00 3.20
3097 3167 6.491062 TGCAAGATTTGGAAGAAGATTTGAGA 59.509 34.615 0.00 0.00 0.00 3.27
3098 3168 6.684686 TGCAAGATTTGGAAGAAGATTTGAG 58.315 36.000 0.00 0.00 0.00 3.02
3099 3169 6.653526 TGCAAGATTTGGAAGAAGATTTGA 57.346 33.333 0.00 0.00 0.00 2.69
3100 3170 7.718272 TTTGCAAGATTTGGAAGAAGATTTG 57.282 32.000 0.00 0.00 42.01 2.32
3101 3171 8.913487 AATTTGCAAGATTTGGAAGAAGATTT 57.087 26.923 0.00 0.00 42.01 2.17
3102 3172 8.780249 CAAATTTGCAAGATTTGGAAGAAGATT 58.220 29.630 24.34 7.80 42.01 2.40
3103 3173 8.152246 TCAAATTTGCAAGATTTGGAAGAAGAT 58.848 29.630 27.67 6.13 42.01 2.40
3104 3174 7.499292 TCAAATTTGCAAGATTTGGAAGAAGA 58.501 30.769 27.67 15.43 42.01 2.87
3105 3175 7.718272 TCAAATTTGCAAGATTTGGAAGAAG 57.282 32.000 27.67 13.81 42.01 2.85
3106 3176 7.986320 TCTTCAAATTTGCAAGATTTGGAAGAA 59.014 29.630 27.67 19.97 42.01 2.52
3107 3177 7.499292 TCTTCAAATTTGCAAGATTTGGAAGA 58.501 30.769 27.67 27.09 42.01 2.87
3108 3178 7.718272 TCTTCAAATTTGCAAGATTTGGAAG 57.282 32.000 27.67 26.17 42.01 3.46
3109 3179 8.680039 ATTCTTCAAATTTGCAAGATTTGGAA 57.320 26.923 27.67 24.74 42.14 3.53
3110 3180 8.680039 AATTCTTCAAATTTGCAAGATTTGGA 57.320 26.923 27.67 23.41 42.14 3.53
3111 3181 9.176181 CAAATTCTTCAAATTTGCAAGATTTGG 57.824 29.630 27.67 22.38 42.14 3.28
3112 3182 9.724839 ACAAATTCTTCAAATTTGCAAGATTTG 57.275 25.926 28.52 28.52 46.23 2.32
3113 3183 9.940166 GACAAATTCTTCAAATTTGCAAGATTT 57.060 25.926 22.45 21.29 46.23 2.17
3114 3184 8.562052 GGACAAATTCTTCAAATTTGCAAGATT 58.438 29.630 22.45 18.52 46.23 2.40
3115 3185 7.095523 CGGACAAATTCTTCAAATTTGCAAGAT 60.096 33.333 22.45 13.65 46.23 2.40
3116 3186 6.200665 CGGACAAATTCTTCAAATTTGCAAGA 59.799 34.615 20.02 20.02 46.23 3.02
3117 3187 6.018832 ACGGACAAATTCTTCAAATTTGCAAG 60.019 34.615 13.54 15.92 46.23 4.01
3118 3188 5.814705 ACGGACAAATTCTTCAAATTTGCAA 59.185 32.000 13.54 0.00 46.23 4.08
3119 3189 5.233902 CACGGACAAATTCTTCAAATTTGCA 59.766 36.000 13.54 1.37 46.23 4.08
3120 3190 5.333263 CCACGGACAAATTCTTCAAATTTGC 60.333 40.000 13.54 12.78 46.23 3.68
3122 3192 6.155475 TCCACGGACAAATTCTTCAAATTT 57.845 33.333 0.00 0.00 0.00 1.82
3123 3193 5.782893 TCCACGGACAAATTCTTCAAATT 57.217 34.783 0.00 0.00 0.00 1.82
3124 3194 5.982890 ATCCACGGACAAATTCTTCAAAT 57.017 34.783 0.00 0.00 0.00 2.32
3125 3195 5.782893 AATCCACGGACAAATTCTTCAAA 57.217 34.783 0.00 0.00 0.00 2.69
3126 3196 5.561919 CGAAATCCACGGACAAATTCTTCAA 60.562 40.000 0.00 0.00 0.00 2.69
3127 3197 4.083537 CGAAATCCACGGACAAATTCTTCA 60.084 41.667 0.00 0.00 0.00 3.02
3128 3198 4.153475 TCGAAATCCACGGACAAATTCTTC 59.847 41.667 0.00 0.00 0.00 2.87
3129 3199 4.069304 TCGAAATCCACGGACAAATTCTT 58.931 39.130 0.00 0.00 0.00 2.52
3130 3200 3.670625 TCGAAATCCACGGACAAATTCT 58.329 40.909 0.00 0.00 0.00 2.40
3131 3201 4.083484 ACTTCGAAATCCACGGACAAATTC 60.083 41.667 0.00 0.00 0.00 2.17
3132 3202 3.818773 ACTTCGAAATCCACGGACAAATT 59.181 39.130 0.00 0.00 0.00 1.82
3133 3203 3.408634 ACTTCGAAATCCACGGACAAAT 58.591 40.909 0.00 0.00 0.00 2.32
3134 3204 2.803956 GACTTCGAAATCCACGGACAAA 59.196 45.455 0.00 0.00 0.00 2.83
3135 3205 2.224090 TGACTTCGAAATCCACGGACAA 60.224 45.455 3.88 0.00 0.00 3.18
3136 3206 1.341852 TGACTTCGAAATCCACGGACA 59.658 47.619 3.88 0.00 0.00 4.02
3137 3207 2.074547 TGACTTCGAAATCCACGGAC 57.925 50.000 3.88 0.00 0.00 4.79
3138 3208 2.803956 GTTTGACTTCGAAATCCACGGA 59.196 45.455 3.88 0.00 0.00 4.69
3139 3209 2.095919 GGTTTGACTTCGAAATCCACGG 60.096 50.000 3.88 0.00 0.00 4.94
3140 3210 2.095919 GGGTTTGACTTCGAAATCCACG 60.096 50.000 3.88 0.00 34.22 4.94
3141 3211 3.146847 AGGGTTTGACTTCGAAATCCAC 58.853 45.455 3.88 1.06 36.21 4.02
3142 3212 3.408634 GAGGGTTTGACTTCGAAATCCA 58.591 45.455 3.88 0.00 36.21 3.41
3143 3213 2.747989 GGAGGGTTTGACTTCGAAATCC 59.252 50.000 3.88 0.00 34.25 3.01
3144 3214 2.747989 GGGAGGGTTTGACTTCGAAATC 59.252 50.000 0.00 0.00 0.00 2.17
3145 3215 2.375509 AGGGAGGGTTTGACTTCGAAAT 59.624 45.455 0.00 0.00 0.00 2.17
3146 3216 1.772453 AGGGAGGGTTTGACTTCGAAA 59.228 47.619 0.00 0.00 0.00 3.46
3147 3217 1.346722 GAGGGAGGGTTTGACTTCGAA 59.653 52.381 0.00 0.00 0.00 3.71
3148 3218 0.974383 GAGGGAGGGTTTGACTTCGA 59.026 55.000 0.00 0.00 0.00 3.71
3149 3219 0.685097 TGAGGGAGGGTTTGACTTCG 59.315 55.000 0.00 0.00 0.00 3.79
3150 3220 2.553247 CCTTGAGGGAGGGTTTGACTTC 60.553 54.545 0.00 0.00 37.23 3.01
3151 3221 1.425448 CCTTGAGGGAGGGTTTGACTT 59.575 52.381 0.00 0.00 37.23 3.01
3152 3222 1.068121 CCTTGAGGGAGGGTTTGACT 58.932 55.000 0.00 0.00 37.23 3.41
3153 3223 0.771755 ACCTTGAGGGAGGGTTTGAC 59.228 55.000 1.54 0.00 41.31 3.18
3154 3224 2.426431 TACCTTGAGGGAGGGTTTGA 57.574 50.000 1.54 0.00 41.31 2.69
3155 3225 3.739401 ATTACCTTGAGGGAGGGTTTG 57.261 47.619 1.54 0.00 41.31 2.93
3156 3226 5.736616 AGATTATTACCTTGAGGGAGGGTTT 59.263 40.000 1.54 0.00 41.31 3.27
3157 3227 5.297799 AGATTATTACCTTGAGGGAGGGTT 58.702 41.667 1.54 0.00 41.31 4.11
3158 3228 4.908481 GAGATTATTACCTTGAGGGAGGGT 59.092 45.833 1.54 0.00 41.31 4.34
3159 3229 4.287326 GGAGATTATTACCTTGAGGGAGGG 59.713 50.000 1.54 0.00 41.31 4.30
3160 3230 4.021016 CGGAGATTATTACCTTGAGGGAGG 60.021 50.000 1.54 0.00 42.75 4.30
3161 3231 4.833380 TCGGAGATTATTACCTTGAGGGAG 59.167 45.833 1.54 0.00 40.27 4.30
3162 3232 4.811498 TCGGAGATTATTACCTTGAGGGA 58.189 43.478 1.54 0.00 40.27 4.20
3163 3233 5.337652 GGATCGGAGATTATTACCTTGAGGG 60.338 48.000 1.54 0.00 45.12 4.30
3164 3234 5.337652 GGGATCGGAGATTATTACCTTGAGG 60.338 48.000 0.00 0.00 45.12 3.86
3165 3235 5.337652 GGGGATCGGAGATTATTACCTTGAG 60.338 48.000 0.00 0.00 45.12 3.02
3166 3236 4.530946 GGGGATCGGAGATTATTACCTTGA 59.469 45.833 0.00 0.00 45.12 3.02
3167 3237 4.532521 AGGGGATCGGAGATTATTACCTTG 59.467 45.833 0.00 0.00 45.12 3.61
3168 3238 4.764491 AGGGGATCGGAGATTATTACCTT 58.236 43.478 0.00 0.00 45.12 3.50
3169 3239 4.421574 AGGGGATCGGAGATTATTACCT 57.578 45.455 0.00 0.00 45.12 3.08
3170 3240 4.286291 ACAAGGGGATCGGAGATTATTACC 59.714 45.833 0.00 0.00 45.12 2.85
3171 3241 5.485209 ACAAGGGGATCGGAGATTATTAC 57.515 43.478 0.00 0.00 45.12 1.89
3172 3242 6.509523 AAACAAGGGGATCGGAGATTATTA 57.490 37.500 0.00 0.00 45.12 0.98
3173 3243 5.388599 AAACAAGGGGATCGGAGATTATT 57.611 39.130 0.00 0.00 45.12 1.40
3174 3244 5.104109 TCAAAACAAGGGGATCGGAGATTAT 60.104 40.000 0.00 0.00 45.12 1.28
3175 3245 4.226394 TCAAAACAAGGGGATCGGAGATTA 59.774 41.667 0.00 0.00 45.12 1.75
3176 3246 3.010138 TCAAAACAAGGGGATCGGAGATT 59.990 43.478 0.00 0.00 45.12 2.40
3177 3247 2.576191 TCAAAACAAGGGGATCGGAGAT 59.424 45.455 0.00 0.00 45.12 2.75
3178 3248 1.982226 TCAAAACAAGGGGATCGGAGA 59.018 47.619 0.00 0.00 45.75 3.71
3179 3249 2.489938 TCAAAACAAGGGGATCGGAG 57.510 50.000 0.00 0.00 0.00 4.63
3180 3250 2.999331 GATCAAAACAAGGGGATCGGA 58.001 47.619 0.00 0.00 0.00 4.55
3183 3253 4.010349 ACTTCGATCAAAACAAGGGGATC 58.990 43.478 0.00 0.00 34.28 3.36
3184 3254 4.034285 ACTTCGATCAAAACAAGGGGAT 57.966 40.909 0.00 0.00 0.00 3.85
3185 3255 3.502123 ACTTCGATCAAAACAAGGGGA 57.498 42.857 0.00 0.00 0.00 4.81
3186 3256 5.240844 ACTTTACTTCGATCAAAACAAGGGG 59.759 40.000 0.00 0.00 0.00 4.79
3187 3257 6.313744 ACTTTACTTCGATCAAAACAAGGG 57.686 37.500 0.00 0.00 0.00 3.95
3188 3258 7.639945 AGAACTTTACTTCGATCAAAACAAGG 58.360 34.615 0.00 0.00 0.00 3.61
3189 3259 7.798982 GGAGAACTTTACTTCGATCAAAACAAG 59.201 37.037 0.00 0.00 0.00 3.16
3190 3260 7.255001 GGGAGAACTTTACTTCGATCAAAACAA 60.255 37.037 0.00 0.00 0.00 2.83
3191 3261 6.204108 GGGAGAACTTTACTTCGATCAAAACA 59.796 38.462 0.00 0.00 0.00 2.83
3192 3262 6.204108 TGGGAGAACTTTACTTCGATCAAAAC 59.796 38.462 0.00 0.00 0.00 2.43
3193 3263 6.292923 TGGGAGAACTTTACTTCGATCAAAA 58.707 36.000 0.00 0.00 0.00 2.44
3194 3264 5.860611 TGGGAGAACTTTACTTCGATCAAA 58.139 37.500 0.00 0.00 0.00 2.69
3195 3265 5.477607 TGGGAGAACTTTACTTCGATCAA 57.522 39.130 0.00 0.00 0.00 2.57
3196 3266 5.677319 ATGGGAGAACTTTACTTCGATCA 57.323 39.130 0.00 0.00 0.00 2.92
3197 3267 5.220681 GCAATGGGAGAACTTTACTTCGATC 60.221 44.000 0.00 0.00 0.00 3.69
3198 3268 4.636206 GCAATGGGAGAACTTTACTTCGAT 59.364 41.667 0.00 0.00 0.00 3.59
3199 3269 4.000988 GCAATGGGAGAACTTTACTTCGA 58.999 43.478 0.00 0.00 0.00 3.71
3200 3270 4.003648 AGCAATGGGAGAACTTTACTTCG 58.996 43.478 0.00 0.00 0.00 3.79
3201 3271 5.003804 TGAGCAATGGGAGAACTTTACTTC 58.996 41.667 0.00 0.00 0.00 3.01
3202 3272 4.985538 TGAGCAATGGGAGAACTTTACTT 58.014 39.130 0.00 0.00 0.00 2.24
3203 3273 4.640771 TGAGCAATGGGAGAACTTTACT 57.359 40.909 0.00 0.00 0.00 2.24
3204 3274 5.904362 AATGAGCAATGGGAGAACTTTAC 57.096 39.130 0.00 0.00 0.00 2.01
3205 3275 5.774690 ACAAATGAGCAATGGGAGAACTTTA 59.225 36.000 0.00 0.00 0.00 1.85
3206 3276 4.590222 ACAAATGAGCAATGGGAGAACTTT 59.410 37.500 0.00 0.00 0.00 2.66
3207 3277 4.154942 ACAAATGAGCAATGGGAGAACTT 58.845 39.130 0.00 0.00 0.00 2.66
3208 3278 3.771216 ACAAATGAGCAATGGGAGAACT 58.229 40.909 0.00 0.00 0.00 3.01
3209 3279 4.240096 CAACAAATGAGCAATGGGAGAAC 58.760 43.478 0.00 0.00 0.00 3.01
3210 3280 3.258872 CCAACAAATGAGCAATGGGAGAA 59.741 43.478 0.00 0.00 0.00 2.87
3211 3281 2.827322 CCAACAAATGAGCAATGGGAGA 59.173 45.455 0.00 0.00 0.00 3.71
3212 3282 2.564062 ACCAACAAATGAGCAATGGGAG 59.436 45.455 0.00 0.00 32.21 4.30
3213 3283 2.607499 ACCAACAAATGAGCAATGGGA 58.393 42.857 0.00 0.00 32.21 4.37
3214 3284 3.511146 ACTACCAACAAATGAGCAATGGG 59.489 43.478 0.00 0.00 32.21 4.00
3215 3285 4.789012 ACTACCAACAAATGAGCAATGG 57.211 40.909 0.00 0.00 0.00 3.16
3216 3286 5.406175 CCAAACTACCAACAAATGAGCAATG 59.594 40.000 0.00 0.00 0.00 2.82
3217 3287 5.511202 CCCAAACTACCAACAAATGAGCAAT 60.511 40.000 0.00 0.00 0.00 3.56
3218 3288 4.202202 CCCAAACTACCAACAAATGAGCAA 60.202 41.667 0.00 0.00 0.00 3.91
3219 3289 3.320541 CCCAAACTACCAACAAATGAGCA 59.679 43.478 0.00 0.00 0.00 4.26
3220 3290 3.306019 CCCCAAACTACCAACAAATGAGC 60.306 47.826 0.00 0.00 0.00 4.26
3221 3291 4.148838 TCCCCAAACTACCAACAAATGAG 58.851 43.478 0.00 0.00 0.00 2.90
3222 3292 4.186077 TCCCCAAACTACCAACAAATGA 57.814 40.909 0.00 0.00 0.00 2.57
3223 3293 4.946478 TTCCCCAAACTACCAACAAATG 57.054 40.909 0.00 0.00 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.