Multiple sequence alignment - TraesCS2D01G275500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2D01G275500 chr2D 100.000 2180 0 0 1 2180 345247849 345245670 0.000000e+00 4026.0
1 TraesCS2D01G275500 chr2D 92.727 55 4 0 513 567 343161112 343161166 1.790000e-11 80.5
2 TraesCS2D01G275500 chr2B 90.570 1771 58 26 15 1692 410942585 410940831 0.000000e+00 2244.0
3 TraesCS2D01G275500 chr2A 89.498 1314 56 30 269 1551 457220827 457219565 0.000000e+00 1587.0
4 TraesCS2D01G275500 chr2A 83.333 288 14 13 1 264 457221413 457221136 3.620000e-58 235.0
5 TraesCS2D01G275500 chr2A 91.150 113 6 2 1585 1693 457219564 457219452 1.350000e-32 150.0
6 TraesCS2D01G275500 chr1B 83.498 303 44 6 1878 2177 136294762 136294463 5.930000e-71 278.0
7 TraesCS2D01G275500 chr1B 88.542 96 7 1 482 577 655858109 655858018 1.770000e-21 113.0
8 TraesCS2D01G275500 chr1B 97.561 41 1 0 1692 1732 31231593 31231633 1.080000e-08 71.3
9 TraesCS2D01G275500 chr1A 77.033 209 32 12 3 207 566123769 566123573 2.960000e-19 106.0
10 TraesCS2D01G275500 chrUn 97.561 41 1 0 1692 1732 116825903 116825943 1.080000e-08 71.3
11 TraesCS2D01G275500 chr3D 100.000 36 0 0 1761 1796 361144439 361144404 1.400000e-07 67.6
12 TraesCS2D01G275500 chr7D 93.333 45 1 2 1761 1805 51706794 51706752 5.020000e-07 65.8
13 TraesCS2D01G275500 chr6B 100.000 35 0 0 1761 1795 480262454 480262420 5.020000e-07 65.8
14 TraesCS2D01G275500 chr5B 95.238 42 0 2 1764 1805 370169652 370169613 5.020000e-07 65.8
15 TraesCS2D01G275500 chr5B 95.238 42 0 2 1764 1805 370220125 370220086 5.020000e-07 65.8
16 TraesCS2D01G275500 chr3A 100.000 35 0 0 1762 1796 159433980 159434014 5.020000e-07 65.8
17 TraesCS2D01G275500 chr6A 97.297 37 1 0 1761 1797 250213384 250213420 1.810000e-06 63.9
18 TraesCS2D01G275500 chr4B 100.000 34 0 0 1764 1797 31126909 31126876 1.810000e-06 63.9
19 TraesCS2D01G275500 chr4D 92.857 42 3 0 1764 1805 35776049 35776008 6.500000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2D01G275500 chr2D 345245670 345247849 2179 True 4026.000000 4026 100.000000 1 2180 1 chr2D.!!$R1 2179
1 TraesCS2D01G275500 chr2B 410940831 410942585 1754 True 2244.000000 2244 90.570000 15 1692 1 chr2B.!!$R1 1677
2 TraesCS2D01G275500 chr2A 457219452 457221413 1961 True 657.333333 1587 87.993667 1 1693 3 chr2A.!!$R1 1692

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
830 1187 0.179034 GCGAGCTTCCTCCAATCCAT 60.179 55.0 0.0 0.0 34.49 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1891 2294 0.108138 CCCTTTGTCGAAGCGGAGAT 60.108 55.0 0.0 0.0 33.84 2.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
271 598 5.128008 AGAGCTACCAACAGATACTCCTTTC 59.872 44.000 0.00 0.00 0.00 2.62
359 686 3.383620 TGTTCATTGTTCATGTTGGCC 57.616 42.857 0.00 0.00 34.06 5.36
406 735 0.540597 GCAAGTTTTCCCTGCCTCCT 60.541 55.000 0.00 0.00 0.00 3.69
428 757 1.476110 CCTTTCACGACCAGGACCAAA 60.476 52.381 0.00 0.00 0.00 3.28
439 768 2.291540 CCAGGACCAAACCCATGTACAT 60.292 50.000 1.41 1.41 0.00 2.29
440 769 2.754552 CAGGACCAAACCCATGTACATG 59.245 50.000 26.02 26.02 38.51 3.21
513 842 1.803334 TTGACCCGAACGAATTCAGG 58.197 50.000 6.22 3.04 38.25 3.86
554 883 4.151867 CCTTTACGTTAGTGCAGGTTTCTC 59.848 45.833 0.00 0.00 0.00 2.87
598 936 7.435547 AGCCTAGCCTGCTAGTACGTAGTAA 62.436 48.000 21.31 0.00 40.61 2.24
599 937 8.655826 AGCCTAGCCTGCTAGTACGTAGTAAT 62.656 46.154 21.31 0.00 45.72 1.89
600 938 9.369406 AGCCTAGCCTGCTAGTACGTAGTAATA 62.369 44.444 21.31 3.06 40.49 0.98
725 1063 2.688507 GAGTCTTGCACGAATTCTCCA 58.311 47.619 3.52 0.00 0.00 3.86
756 1108 2.357517 CGAGGGCACTGGACACAC 60.358 66.667 0.00 0.00 0.00 3.82
760 1112 1.598130 GGGCACTGGACACACAGAC 60.598 63.158 0.00 0.00 40.97 3.51
800 1152 6.578919 CCGCTCTACATGCATGTATATATACG 59.421 42.308 33.66 27.50 41.92 3.06
830 1187 0.179034 GCGAGCTTCCTCCAATCCAT 60.179 55.000 0.00 0.00 34.49 3.41
831 1188 1.748591 GCGAGCTTCCTCCAATCCATT 60.749 52.381 0.00 0.00 34.49 3.16
833 1190 2.216898 GAGCTTCCTCCAATCCATTCG 58.783 52.381 0.00 0.00 31.68 3.34
834 1191 1.839994 AGCTTCCTCCAATCCATTCGA 59.160 47.619 0.00 0.00 0.00 3.71
835 1192 2.239654 AGCTTCCTCCAATCCATTCGAA 59.760 45.455 0.00 0.00 0.00 3.71
836 1193 3.016736 GCTTCCTCCAATCCATTCGAAA 58.983 45.455 0.00 0.00 0.00 3.46
837 1194 3.065925 GCTTCCTCCAATCCATTCGAAAG 59.934 47.826 0.00 0.00 0.00 2.62
922 1284 1.997874 AGACAGGGCACTCCATCCC 60.998 63.158 0.00 0.00 42.94 3.85
954 1323 4.073293 TGGGTTCAGTCTTTCTCTTGAC 57.927 45.455 0.00 0.00 0.00 3.18
1208 1588 6.238211 GCTCGCATAGTTTATATTGCATAGGG 60.238 42.308 0.00 0.00 34.80 3.53
1302 1682 1.461127 CCGCTCTTCCTTTGTTTCTCG 59.539 52.381 0.00 0.00 0.00 4.04
1393 1783 5.443283 ACGTATGACTATGTCCAGTTCCTA 58.557 41.667 0.00 0.00 0.00 2.94
1394 1784 5.889853 ACGTATGACTATGTCCAGTTCCTAA 59.110 40.000 0.00 0.00 0.00 2.69
1395 1785 6.183360 ACGTATGACTATGTCCAGTTCCTAAC 60.183 42.308 0.00 0.00 0.00 2.34
1396 1786 6.183360 CGTATGACTATGTCCAGTTCCTAACA 60.183 42.308 0.00 0.00 0.00 2.41
1397 1787 6.814954 ATGACTATGTCCAGTTCCTAACAT 57.185 37.500 0.00 0.00 36.40 2.71
1398 1788 6.222038 TGACTATGTCCAGTTCCTAACATC 57.778 41.667 0.00 0.00 34.39 3.06
1399 1789 5.958380 TGACTATGTCCAGTTCCTAACATCT 59.042 40.000 0.00 0.00 34.39 2.90
1400 1790 6.440647 TGACTATGTCCAGTTCCTAACATCTT 59.559 38.462 0.00 0.00 34.39 2.40
1401 1791 6.879400 ACTATGTCCAGTTCCTAACATCTTC 58.121 40.000 0.00 0.00 34.39 2.87
1402 1792 6.670027 ACTATGTCCAGTTCCTAACATCTTCT 59.330 38.462 0.00 0.00 34.39 2.85
1425 1815 5.488341 TGACTTGTGGTAGAATTAAGCCTC 58.512 41.667 0.00 0.00 0.00 4.70
1439 1829 3.463048 AAGCCTCAAATGTGAATCCCT 57.537 42.857 0.00 0.00 31.88 4.20
1450 1840 1.734465 GTGAATCCCTTGCTCAGTTCG 59.266 52.381 0.00 0.00 0.00 3.95
1496 1886 0.885879 ATATTACGGCGCTCCATCGA 59.114 50.000 6.90 0.00 0.00 3.59
1506 1896 1.201965 CGCTCCATCGAAGCAGTTTTC 60.202 52.381 8.23 0.00 39.81 2.29
1507 1897 2.079925 GCTCCATCGAAGCAGTTTTCT 58.920 47.619 2.70 0.00 39.61 2.52
1508 1898 2.485814 GCTCCATCGAAGCAGTTTTCTT 59.514 45.455 2.70 0.00 39.61 2.52
1509 1899 3.057946 GCTCCATCGAAGCAGTTTTCTTT 60.058 43.478 2.70 0.00 39.61 2.52
1510 1900 4.557496 GCTCCATCGAAGCAGTTTTCTTTT 60.557 41.667 2.70 0.00 39.61 2.27
1511 1901 5.514274 TCCATCGAAGCAGTTTTCTTTTT 57.486 34.783 0.00 0.00 0.00 1.94
1512 1902 5.519722 TCCATCGAAGCAGTTTTCTTTTTC 58.480 37.500 0.00 0.00 0.00 2.29
1513 1903 5.299279 TCCATCGAAGCAGTTTTCTTTTTCT 59.701 36.000 0.00 0.00 0.00 2.52
1558 1949 6.849085 ACCTCCAATAGCTGTATGATCTAG 57.151 41.667 0.00 0.00 0.00 2.43
1563 1954 6.661377 TCCAATAGCTGTATGATCTAGTCTCC 59.339 42.308 0.00 0.00 0.00 3.71
1613 2012 0.870313 AGGAGATATCAGGGCAGGGA 59.130 55.000 5.32 0.00 0.00 4.20
1694 2097 8.429493 AAATATTAACTGTAGGACCGTAAAGC 57.571 34.615 0.00 0.00 0.00 3.51
1695 2098 2.756840 AACTGTAGGACCGTAAAGCC 57.243 50.000 0.00 0.00 0.00 4.35
1696 2099 1.934410 ACTGTAGGACCGTAAAGCCT 58.066 50.000 0.00 0.00 35.82 4.58
1697 2100 2.254508 ACTGTAGGACCGTAAAGCCTT 58.745 47.619 0.00 0.00 33.28 4.35
1698 2101 2.028385 ACTGTAGGACCGTAAAGCCTTG 60.028 50.000 0.00 0.00 33.28 3.61
1699 2102 2.232941 CTGTAGGACCGTAAAGCCTTGA 59.767 50.000 0.00 0.00 33.28 3.02
1700 2103 2.633967 TGTAGGACCGTAAAGCCTTGAA 59.366 45.455 0.00 0.00 33.28 2.69
1701 2104 3.262405 TGTAGGACCGTAAAGCCTTGAAT 59.738 43.478 0.00 0.00 33.28 2.57
1702 2105 2.987232 AGGACCGTAAAGCCTTGAATC 58.013 47.619 0.00 0.00 0.00 2.52
1703 2106 2.572104 AGGACCGTAAAGCCTTGAATCT 59.428 45.455 0.00 0.00 0.00 2.40
1704 2107 3.773119 AGGACCGTAAAGCCTTGAATCTA 59.227 43.478 0.00 0.00 0.00 1.98
1705 2108 4.409247 AGGACCGTAAAGCCTTGAATCTAT 59.591 41.667 0.00 0.00 0.00 1.98
1706 2109 4.750598 GGACCGTAAAGCCTTGAATCTATC 59.249 45.833 0.00 0.00 0.00 2.08
1707 2110 5.353394 ACCGTAAAGCCTTGAATCTATCA 57.647 39.130 0.00 0.00 35.85 2.15
1708 2111 5.930135 ACCGTAAAGCCTTGAATCTATCAT 58.070 37.500 0.00 0.00 38.03 2.45
1709 2112 6.357367 ACCGTAAAGCCTTGAATCTATCATT 58.643 36.000 0.00 0.00 38.03 2.57
1710 2113 6.260936 ACCGTAAAGCCTTGAATCTATCATTG 59.739 38.462 0.00 0.00 38.03 2.82
1711 2114 6.293626 CCGTAAAGCCTTGAATCTATCATTGG 60.294 42.308 0.00 0.00 38.03 3.16
1713 2116 3.930634 GCCTTGAATCTATCATTGGCC 57.069 47.619 0.00 0.00 45.06 5.36
1714 2117 3.494332 GCCTTGAATCTATCATTGGCCT 58.506 45.455 3.32 0.00 45.06 5.19
1715 2118 3.505293 GCCTTGAATCTATCATTGGCCTC 59.495 47.826 3.32 0.00 45.06 4.70
1716 2119 4.077822 CCTTGAATCTATCATTGGCCTCC 58.922 47.826 3.32 0.00 38.03 4.30
1717 2120 4.446745 CCTTGAATCTATCATTGGCCTCCA 60.447 45.833 3.32 0.00 38.03 3.86
1719 2122 4.464008 TGAATCTATCATTGGCCTCCAAC 58.536 43.478 3.32 0.00 46.95 3.77
1720 2123 4.166725 TGAATCTATCATTGGCCTCCAACT 59.833 41.667 3.32 0.00 46.95 3.16
1721 2124 5.369404 TGAATCTATCATTGGCCTCCAACTA 59.631 40.000 3.32 0.00 46.95 2.24
1722 2125 5.912149 ATCTATCATTGGCCTCCAACTAA 57.088 39.130 3.32 0.00 46.95 2.24
1723 2126 5.708736 TCTATCATTGGCCTCCAACTAAA 57.291 39.130 3.32 0.00 46.95 1.85
1724 2127 6.073447 TCTATCATTGGCCTCCAACTAAAA 57.927 37.500 3.32 0.00 46.95 1.52
1725 2128 6.672593 TCTATCATTGGCCTCCAACTAAAAT 58.327 36.000 3.32 0.00 46.95 1.82
1726 2129 7.125391 TCTATCATTGGCCTCCAACTAAAATT 58.875 34.615 3.32 0.00 46.95 1.82
1727 2130 6.625532 ATCATTGGCCTCCAACTAAAATTT 57.374 33.333 3.32 0.00 46.95 1.82
1728 2131 6.036577 TCATTGGCCTCCAACTAAAATTTC 57.963 37.500 3.32 0.00 46.95 2.17
1729 2132 4.882842 TTGGCCTCCAACTAAAATTTCC 57.117 40.909 3.32 0.00 38.75 3.13
1730 2133 2.823154 TGGCCTCCAACTAAAATTTCCG 59.177 45.455 3.32 0.00 0.00 4.30
1731 2134 3.086282 GGCCTCCAACTAAAATTTCCGA 58.914 45.455 0.00 0.00 0.00 4.55
1732 2135 3.128764 GGCCTCCAACTAAAATTTCCGAG 59.871 47.826 0.00 0.00 0.00 4.63
1733 2136 4.007659 GCCTCCAACTAAAATTTCCGAGA 58.992 43.478 0.00 0.00 0.00 4.04
1734 2137 4.457949 GCCTCCAACTAAAATTTCCGAGAA 59.542 41.667 0.00 0.00 0.00 2.87
1735 2138 5.048294 GCCTCCAACTAAAATTTCCGAGAAA 60.048 40.000 0.00 2.25 0.00 2.52
1736 2139 6.516028 GCCTCCAACTAAAATTTCCGAGAAAA 60.516 38.462 0.00 0.00 0.00 2.29
1737 2140 7.602753 CCTCCAACTAAAATTTCCGAGAAAAT 58.397 34.615 0.00 0.00 0.00 1.82
1738 2141 7.542130 CCTCCAACTAAAATTTCCGAGAAAATG 59.458 37.037 0.00 0.00 0.00 2.32
1739 2142 7.375053 TCCAACTAAAATTTCCGAGAAAATGG 58.625 34.615 0.00 0.00 0.00 3.16
1740 2143 6.589907 CCAACTAAAATTTCCGAGAAAATGGG 59.410 38.462 0.00 0.00 0.00 4.00
1741 2144 7.375053 CAACTAAAATTTCCGAGAAAATGGGA 58.625 34.615 0.00 0.00 33.26 4.37
1742 2145 6.920817 ACTAAAATTTCCGAGAAAATGGGAC 58.079 36.000 0.00 0.00 35.17 4.46
1743 2146 6.719829 ACTAAAATTTCCGAGAAAATGGGACT 59.280 34.615 0.00 0.00 35.17 3.85
1744 2147 7.886446 ACTAAAATTTCCGAGAAAATGGGACTA 59.114 33.333 0.00 0.00 35.17 2.59
1745 2148 6.759497 AAATTTCCGAGAAAATGGGACTAG 57.241 37.500 3.67 0.00 35.17 2.57
1746 2149 2.981859 TCCGAGAAAATGGGACTAGC 57.018 50.000 0.00 0.00 29.43 3.42
1747 2150 1.485066 TCCGAGAAAATGGGACTAGCC 59.515 52.381 0.00 0.00 29.43 3.93
1756 2159 3.468140 GGACTAGCCCCCACCGTC 61.468 72.222 0.00 0.00 0.00 4.79
1757 2160 2.363925 GACTAGCCCCCACCGTCT 60.364 66.667 0.00 0.00 0.00 4.18
1758 2161 1.076485 GACTAGCCCCCACCGTCTA 60.076 63.158 0.00 0.00 0.00 2.59
1759 2162 1.076192 ACTAGCCCCCACCGTCTAG 60.076 63.158 0.00 0.00 35.77 2.43
1760 2163 2.443390 TAGCCCCCACCGTCTAGC 60.443 66.667 0.00 0.00 0.00 3.42
1763 2166 3.782443 CCCCCACCGTCTAGCCAC 61.782 72.222 0.00 0.00 0.00 5.01
1764 2167 4.143333 CCCCACCGTCTAGCCACG 62.143 72.222 0.00 0.00 39.61 4.94
1765 2168 4.814294 CCCACCGTCTAGCCACGC 62.814 72.222 0.00 0.00 38.52 5.34
1766 2169 4.814294 CCACCGTCTAGCCACGCC 62.814 72.222 0.00 0.00 38.52 5.68
1842 2245 4.711949 CGGCCACCAAGCAGCTCT 62.712 66.667 2.24 0.00 0.00 4.09
1843 2246 2.671070 GGCCACCAAGCAGCTCTA 59.329 61.111 0.00 0.00 0.00 2.43
1844 2247 1.746991 GGCCACCAAGCAGCTCTAC 60.747 63.158 0.00 0.00 0.00 2.59
1845 2248 2.103042 GCCACCAAGCAGCTCTACG 61.103 63.158 0.00 0.00 0.00 3.51
1846 2249 2.103042 CCACCAAGCAGCTCTACGC 61.103 63.158 0.00 0.00 39.57 4.42
1856 2259 3.052181 GCTCTACGCTTCCTGTTCC 57.948 57.895 0.00 0.00 35.14 3.62
1857 2260 0.533032 GCTCTACGCTTCCTGTTCCT 59.467 55.000 0.00 0.00 35.14 3.36
1858 2261 1.470112 GCTCTACGCTTCCTGTTCCTC 60.470 57.143 0.00 0.00 35.14 3.71
1859 2262 2.096248 CTCTACGCTTCCTGTTCCTCT 58.904 52.381 0.00 0.00 0.00 3.69
1860 2263 2.093106 TCTACGCTTCCTGTTCCTCTC 58.907 52.381 0.00 0.00 0.00 3.20
1861 2264 1.135333 CTACGCTTCCTGTTCCTCTCC 59.865 57.143 0.00 0.00 0.00 3.71
1862 2265 0.543174 ACGCTTCCTGTTCCTCTCCT 60.543 55.000 0.00 0.00 0.00 3.69
1863 2266 0.174617 CGCTTCCTGTTCCTCTCCTC 59.825 60.000 0.00 0.00 0.00 3.71
1864 2267 0.539518 GCTTCCTGTTCCTCTCCTCC 59.460 60.000 0.00 0.00 0.00 4.30
1865 2268 1.944177 CTTCCTGTTCCTCTCCTCCA 58.056 55.000 0.00 0.00 0.00 3.86
1866 2269 1.830477 CTTCCTGTTCCTCTCCTCCAG 59.170 57.143 0.00 0.00 0.00 3.86
1867 2270 1.084866 TCCTGTTCCTCTCCTCCAGA 58.915 55.000 0.00 0.00 0.00 3.86
1869 2272 0.823460 CTGTTCCTCTCCTCCAGAGC 59.177 60.000 0.00 0.00 46.90 4.09
1870 2273 0.411452 TGTTCCTCTCCTCCAGAGCT 59.589 55.000 0.00 0.00 46.90 4.09
1871 2274 0.823460 GTTCCTCTCCTCCAGAGCTG 59.177 60.000 0.00 0.00 46.90 4.24
1880 2283 4.631773 CCAGAGCTGGTCACCATG 57.368 61.111 9.78 0.00 45.53 3.66
1881 2284 1.681666 CCAGAGCTGGTCACCATGT 59.318 57.895 9.78 0.00 45.53 3.21
1882 2285 0.392193 CCAGAGCTGGTCACCATGTC 60.392 60.000 9.78 0.00 45.53 3.06
1883 2286 0.612229 CAGAGCTGGTCACCATGTCT 59.388 55.000 9.78 0.00 30.82 3.41
1884 2287 0.901124 AGAGCTGGTCACCATGTCTC 59.099 55.000 9.78 4.85 30.82 3.36
1885 2288 0.901124 GAGCTGGTCACCATGTCTCT 59.099 55.000 0.00 0.00 30.82 3.10
1886 2289 1.277557 GAGCTGGTCACCATGTCTCTT 59.722 52.381 0.00 0.00 30.82 2.85
1887 2290 1.701847 AGCTGGTCACCATGTCTCTTT 59.298 47.619 0.00 0.00 30.82 2.52
1888 2291 2.107204 AGCTGGTCACCATGTCTCTTTT 59.893 45.455 0.00 0.00 30.82 2.27
1889 2292 2.485814 GCTGGTCACCATGTCTCTTTTC 59.514 50.000 0.00 0.00 30.82 2.29
1890 2293 2.738846 CTGGTCACCATGTCTCTTTTCG 59.261 50.000 0.00 0.00 30.82 3.46
1891 2294 2.367241 TGGTCACCATGTCTCTTTTCGA 59.633 45.455 0.00 0.00 0.00 3.71
1892 2295 3.007940 TGGTCACCATGTCTCTTTTCGAT 59.992 43.478 0.00 0.00 0.00 3.59
1893 2296 3.619038 GGTCACCATGTCTCTTTTCGATC 59.381 47.826 0.00 0.00 0.00 3.69
1894 2297 4.499183 GTCACCATGTCTCTTTTCGATCT 58.501 43.478 0.00 0.00 0.00 2.75
1895 2298 4.564769 GTCACCATGTCTCTTTTCGATCTC 59.435 45.833 0.00 0.00 0.00 2.75
1896 2299 3.868077 CACCATGTCTCTTTTCGATCTCC 59.132 47.826 0.00 0.00 0.00 3.71
1897 2300 3.119291 CCATGTCTCTTTTCGATCTCCG 58.881 50.000 0.00 0.00 40.25 4.63
1898 2301 2.279582 TGTCTCTTTTCGATCTCCGC 57.720 50.000 0.00 0.00 38.37 5.54
1899 2302 1.819288 TGTCTCTTTTCGATCTCCGCT 59.181 47.619 0.00 0.00 38.37 5.52
1900 2303 2.231478 TGTCTCTTTTCGATCTCCGCTT 59.769 45.455 0.00 0.00 38.37 4.68
1901 2304 2.855370 GTCTCTTTTCGATCTCCGCTTC 59.145 50.000 0.00 0.00 38.37 3.86
1902 2305 1.849219 CTCTTTTCGATCTCCGCTTCG 59.151 52.381 0.00 0.00 38.37 3.79
1903 2306 1.471287 TCTTTTCGATCTCCGCTTCGA 59.529 47.619 0.00 0.00 42.19 3.71
1904 2307 1.584308 CTTTTCGATCTCCGCTTCGAC 59.416 52.381 0.00 0.00 43.44 4.20
1905 2308 0.524414 TTTCGATCTCCGCTTCGACA 59.476 50.000 0.00 0.00 43.44 4.35
1906 2309 0.524414 TTCGATCTCCGCTTCGACAA 59.476 50.000 0.00 0.00 43.44 3.18
1907 2310 0.524414 TCGATCTCCGCTTCGACAAA 59.476 50.000 0.00 0.00 39.29 2.83
1908 2311 0.917259 CGATCTCCGCTTCGACAAAG 59.083 55.000 0.00 0.00 37.55 2.77
1909 2312 1.281899 GATCTCCGCTTCGACAAAGG 58.718 55.000 0.00 0.00 35.37 3.11
1910 2313 0.108138 ATCTCCGCTTCGACAAAGGG 60.108 55.000 0.00 0.00 45.16 3.95
1911 2314 2.358247 TCCGCTTCGACAAAGGGC 60.358 61.111 0.00 0.00 44.44 5.19
1912 2315 2.668212 CCGCTTCGACAAAGGGCA 60.668 61.111 0.00 0.00 44.44 5.36
1913 2316 2.040544 CCGCTTCGACAAAGGGCAT 61.041 57.895 0.00 0.00 44.44 4.40
1914 2317 1.135315 CGCTTCGACAAAGGGCATG 59.865 57.895 0.00 0.00 40.56 4.06
1915 2318 1.153958 GCTTCGACAAAGGGCATGC 60.154 57.895 9.90 9.90 35.37 4.06
1916 2319 1.865788 GCTTCGACAAAGGGCATGCA 61.866 55.000 21.36 0.00 35.37 3.96
1917 2320 0.813184 CTTCGACAAAGGGCATGCAT 59.187 50.000 21.36 4.13 0.00 3.96
1918 2321 1.203052 CTTCGACAAAGGGCATGCATT 59.797 47.619 21.36 10.89 0.00 3.56
1919 2322 1.255882 TCGACAAAGGGCATGCATTT 58.744 45.000 21.36 16.44 0.00 2.32
1920 2323 1.067706 TCGACAAAGGGCATGCATTTG 60.068 47.619 30.67 30.67 39.32 2.32
1921 2324 1.067706 CGACAAAGGGCATGCATTTGA 60.068 47.619 35.31 0.00 37.37 2.69
1922 2325 2.609984 CGACAAAGGGCATGCATTTGAA 60.610 45.455 35.31 0.00 37.37 2.69
1923 2326 2.997986 GACAAAGGGCATGCATTTGAAG 59.002 45.455 35.31 20.37 37.37 3.02
1924 2327 2.633967 ACAAAGGGCATGCATTTGAAGA 59.366 40.909 35.31 0.00 37.37 2.87
1925 2328 2.997986 CAAAGGGCATGCATTTGAAGAC 59.002 45.455 29.62 8.60 36.28 3.01
1926 2329 0.813184 AGGGCATGCATTTGAAGACG 59.187 50.000 21.36 0.00 0.00 4.18
1927 2330 0.179129 GGGCATGCATTTGAAGACGG 60.179 55.000 21.36 0.00 0.00 4.79
1928 2331 0.803380 GGCATGCATTTGAAGACGGC 60.803 55.000 21.36 0.00 0.00 5.68
1929 2332 0.109179 GCATGCATTTGAAGACGGCA 60.109 50.000 14.21 0.00 39.03 5.69
1930 2333 1.470285 GCATGCATTTGAAGACGGCAT 60.470 47.619 14.21 0.00 45.33 4.40
1931 2334 2.456989 CATGCATTTGAAGACGGCATC 58.543 47.619 0.00 0.00 42.81 3.91
1932 2335 1.825090 TGCATTTGAAGACGGCATCT 58.175 45.000 0.00 0.00 40.46 2.90
1933 2336 1.469703 TGCATTTGAAGACGGCATCTG 59.530 47.619 0.00 0.00 37.88 2.90
1934 2337 1.202222 GCATTTGAAGACGGCATCTGG 60.202 52.381 0.00 0.00 37.88 3.86
1935 2338 2.358957 CATTTGAAGACGGCATCTGGA 58.641 47.619 0.00 0.00 37.88 3.86
1936 2339 2.559698 TTTGAAGACGGCATCTGGAA 57.440 45.000 0.00 0.00 37.88 3.53
1937 2340 2.787473 TTGAAGACGGCATCTGGAAT 57.213 45.000 0.00 0.00 37.88 3.01
1938 2341 2.787473 TGAAGACGGCATCTGGAATT 57.213 45.000 0.00 0.00 37.88 2.17
1939 2342 2.632377 TGAAGACGGCATCTGGAATTC 58.368 47.619 0.00 0.00 37.88 2.17
1940 2343 2.237143 TGAAGACGGCATCTGGAATTCT 59.763 45.455 5.23 0.00 37.88 2.40
1941 2344 2.611225 AGACGGCATCTGGAATTCTC 57.389 50.000 5.23 0.00 35.81 2.87
1942 2345 2.114616 AGACGGCATCTGGAATTCTCT 58.885 47.619 5.23 0.00 35.81 3.10
1943 2346 2.503356 AGACGGCATCTGGAATTCTCTT 59.497 45.455 5.23 0.00 35.81 2.85
1944 2347 2.869192 GACGGCATCTGGAATTCTCTTC 59.131 50.000 5.23 0.00 0.00 2.87
1945 2348 2.237143 ACGGCATCTGGAATTCTCTTCA 59.763 45.455 5.23 0.00 0.00 3.02
1946 2349 3.118112 ACGGCATCTGGAATTCTCTTCAT 60.118 43.478 5.23 0.00 0.00 2.57
1947 2350 3.497640 CGGCATCTGGAATTCTCTTCATC 59.502 47.826 5.23 0.00 0.00 2.92
1948 2351 4.716794 GGCATCTGGAATTCTCTTCATCT 58.283 43.478 5.23 0.00 0.00 2.90
1949 2352 4.756135 GGCATCTGGAATTCTCTTCATCTC 59.244 45.833 5.23 0.00 0.00 2.75
1950 2353 4.756135 GCATCTGGAATTCTCTTCATCTCC 59.244 45.833 5.23 0.00 0.00 3.71
1951 2354 5.307204 CATCTGGAATTCTCTTCATCTCCC 58.693 45.833 5.23 0.00 0.00 4.30
1952 2355 4.365368 TCTGGAATTCTCTTCATCTCCCA 58.635 43.478 5.23 0.00 0.00 4.37
1953 2356 4.784838 TCTGGAATTCTCTTCATCTCCCAA 59.215 41.667 5.23 0.00 0.00 4.12
1954 2357 5.431073 TCTGGAATTCTCTTCATCTCCCAAT 59.569 40.000 5.23 0.00 0.00 3.16
1955 2358 5.688807 TGGAATTCTCTTCATCTCCCAATC 58.311 41.667 5.23 0.00 0.00 2.67
1956 2359 5.192321 TGGAATTCTCTTCATCTCCCAATCA 59.808 40.000 5.23 0.00 0.00 2.57
1957 2360 6.125029 GGAATTCTCTTCATCTCCCAATCAA 58.875 40.000 5.23 0.00 0.00 2.57
1958 2361 6.039159 GGAATTCTCTTCATCTCCCAATCAAC 59.961 42.308 5.23 0.00 0.00 3.18
1959 2362 5.768980 TTCTCTTCATCTCCCAATCAACT 57.231 39.130 0.00 0.00 0.00 3.16
1960 2363 6.874278 TTCTCTTCATCTCCCAATCAACTA 57.126 37.500 0.00 0.00 0.00 2.24
1961 2364 6.227298 TCTCTTCATCTCCCAATCAACTAC 57.773 41.667 0.00 0.00 0.00 2.73
1962 2365 5.960811 TCTCTTCATCTCCCAATCAACTACT 59.039 40.000 0.00 0.00 0.00 2.57
1963 2366 6.097554 TCTCTTCATCTCCCAATCAACTACTC 59.902 42.308 0.00 0.00 0.00 2.59
1964 2367 5.960811 TCTTCATCTCCCAATCAACTACTCT 59.039 40.000 0.00 0.00 0.00 3.24
1965 2368 5.604758 TCATCTCCCAATCAACTACTCTG 57.395 43.478 0.00 0.00 0.00 3.35
1966 2369 5.272402 TCATCTCCCAATCAACTACTCTGA 58.728 41.667 0.00 0.00 0.00 3.27
1967 2370 5.362143 TCATCTCCCAATCAACTACTCTGAG 59.638 44.000 2.45 2.45 0.00 3.35
1968 2371 4.026744 TCTCCCAATCAACTACTCTGAGG 58.973 47.826 9.85 0.00 0.00 3.86
1969 2372 3.107601 TCCCAATCAACTACTCTGAGGG 58.892 50.000 9.85 4.15 32.13 4.30
1970 2373 2.420687 CCCAATCAACTACTCTGAGGGC 60.421 54.545 9.85 0.00 0.00 5.19
1971 2374 2.237143 CCAATCAACTACTCTGAGGGCA 59.763 50.000 9.85 0.00 0.00 5.36
1972 2375 3.529533 CAATCAACTACTCTGAGGGCAG 58.470 50.000 9.85 5.74 43.67 4.85
1973 2376 0.898320 TCAACTACTCTGAGGGCAGC 59.102 55.000 9.85 0.00 42.01 5.25
1974 2377 0.459237 CAACTACTCTGAGGGCAGCG 60.459 60.000 9.85 0.00 42.01 5.18
1975 2378 1.608717 AACTACTCTGAGGGCAGCGG 61.609 60.000 9.85 0.00 42.01 5.52
1976 2379 1.754621 CTACTCTGAGGGCAGCGGA 60.755 63.158 9.85 0.00 42.01 5.54
1977 2380 1.075970 TACTCTGAGGGCAGCGGAT 60.076 57.895 9.85 0.00 42.01 4.18
1978 2381 0.687757 TACTCTGAGGGCAGCGGATT 60.688 55.000 9.85 0.00 42.01 3.01
1979 2382 1.523258 CTCTGAGGGCAGCGGATTG 60.523 63.158 0.00 0.00 42.01 2.67
1980 2383 1.964608 CTCTGAGGGCAGCGGATTGA 61.965 60.000 0.00 0.00 42.01 2.57
1981 2384 1.523258 CTGAGGGCAGCGGATTGAG 60.523 63.158 0.00 0.00 34.95 3.02
1982 2385 2.203126 GAGGGCAGCGGATTGAGG 60.203 66.667 0.00 0.00 0.00 3.86
1983 2386 3.764160 GAGGGCAGCGGATTGAGGG 62.764 68.421 0.00 0.00 0.00 4.30
1984 2387 3.797353 GGGCAGCGGATTGAGGGA 61.797 66.667 0.00 0.00 0.00 4.20
1985 2388 2.272146 GGCAGCGGATTGAGGGAA 59.728 61.111 0.00 0.00 0.00 3.97
1986 2389 1.152881 GGCAGCGGATTGAGGGAAT 60.153 57.895 0.00 0.00 0.00 3.01
1987 2390 0.753111 GGCAGCGGATTGAGGGAATT 60.753 55.000 0.00 0.00 0.00 2.17
1988 2391 0.665298 GCAGCGGATTGAGGGAATTC 59.335 55.000 0.00 0.00 0.00 2.17
1989 2392 1.748591 GCAGCGGATTGAGGGAATTCT 60.749 52.381 5.23 0.00 0.00 2.40
1990 2393 2.648059 CAGCGGATTGAGGGAATTCTT 58.352 47.619 5.23 0.00 0.00 2.52
1991 2394 2.615912 CAGCGGATTGAGGGAATTCTTC 59.384 50.000 5.23 4.65 0.00 2.87
1992 2395 2.507471 AGCGGATTGAGGGAATTCTTCT 59.493 45.455 5.23 3.58 0.00 2.85
1993 2396 3.054065 AGCGGATTGAGGGAATTCTTCTT 60.054 43.478 5.23 0.00 0.00 2.52
1994 2397 3.065925 GCGGATTGAGGGAATTCTTCTTG 59.934 47.826 5.23 0.00 0.00 3.02
1995 2398 3.629398 CGGATTGAGGGAATTCTTCTTGG 59.371 47.826 5.23 0.00 0.00 3.61
1996 2399 4.604156 GGATTGAGGGAATTCTTCTTGGT 58.396 43.478 5.23 0.00 0.00 3.67
1997 2400 5.019470 GGATTGAGGGAATTCTTCTTGGTT 58.981 41.667 5.23 0.00 0.00 3.67
1998 2401 5.105595 GGATTGAGGGAATTCTTCTTGGTTG 60.106 44.000 5.23 0.00 0.00 3.77
1999 2402 3.157087 TGAGGGAATTCTTCTTGGTTGC 58.843 45.455 5.23 0.00 0.00 4.17
2000 2403 2.162408 GAGGGAATTCTTCTTGGTTGCG 59.838 50.000 5.23 0.00 0.00 4.85
2001 2404 1.202348 GGGAATTCTTCTTGGTTGCGG 59.798 52.381 5.23 0.00 0.00 5.69
2002 2405 2.159382 GGAATTCTTCTTGGTTGCGGA 58.841 47.619 5.23 0.00 0.00 5.54
2003 2406 2.556622 GGAATTCTTCTTGGTTGCGGAA 59.443 45.455 5.23 0.00 0.00 4.30
2004 2407 3.193479 GGAATTCTTCTTGGTTGCGGAAT 59.807 43.478 5.23 0.00 0.00 3.01
2005 2408 4.321974 GGAATTCTTCTTGGTTGCGGAATT 60.322 41.667 5.23 0.00 36.51 2.17
2006 2409 4.871933 ATTCTTCTTGGTTGCGGAATTT 57.128 36.364 0.00 0.00 0.00 1.82
2007 2410 5.975693 ATTCTTCTTGGTTGCGGAATTTA 57.024 34.783 0.00 0.00 0.00 1.40
2008 2411 4.759516 TCTTCTTGGTTGCGGAATTTAC 57.240 40.909 0.00 0.00 0.00 2.01
2009 2412 4.394729 TCTTCTTGGTTGCGGAATTTACT 58.605 39.130 0.00 0.00 0.00 2.24
2010 2413 4.454504 TCTTCTTGGTTGCGGAATTTACTC 59.545 41.667 0.00 0.00 0.00 2.59
2011 2414 2.739913 TCTTGGTTGCGGAATTTACTCG 59.260 45.455 0.00 0.00 0.00 4.18
2012 2415 2.459060 TGGTTGCGGAATTTACTCGA 57.541 45.000 0.00 0.00 0.00 4.04
2013 2416 2.980568 TGGTTGCGGAATTTACTCGAT 58.019 42.857 0.00 0.00 0.00 3.59
2014 2417 2.933906 TGGTTGCGGAATTTACTCGATC 59.066 45.455 0.00 0.00 0.00 3.69
2015 2418 3.195661 GGTTGCGGAATTTACTCGATCT 58.804 45.455 0.00 0.00 0.00 2.75
2016 2419 3.245519 GGTTGCGGAATTTACTCGATCTC 59.754 47.826 0.00 0.00 0.00 2.75
2017 2420 3.793797 TGCGGAATTTACTCGATCTCA 57.206 42.857 0.00 0.00 0.00 3.27
2018 2421 3.706698 TGCGGAATTTACTCGATCTCAG 58.293 45.455 0.00 0.00 0.00 3.35
2019 2422 3.130516 TGCGGAATTTACTCGATCTCAGT 59.869 43.478 0.00 0.00 0.00 3.41
2020 2423 4.113354 GCGGAATTTACTCGATCTCAGTT 58.887 43.478 0.00 0.00 0.00 3.16
2021 2424 4.207429 GCGGAATTTACTCGATCTCAGTTC 59.793 45.833 0.00 0.00 0.00 3.01
2022 2425 5.340803 CGGAATTTACTCGATCTCAGTTCA 58.659 41.667 0.00 0.00 0.00 3.18
2023 2426 5.457148 CGGAATTTACTCGATCTCAGTTCAG 59.543 44.000 0.00 0.00 0.00 3.02
2024 2427 5.751028 GGAATTTACTCGATCTCAGTTCAGG 59.249 44.000 0.00 0.00 0.00 3.86
2025 2428 3.784701 TTACTCGATCTCAGTTCAGGC 57.215 47.619 0.00 0.00 0.00 4.85
2026 2429 1.846007 ACTCGATCTCAGTTCAGGCT 58.154 50.000 0.00 0.00 0.00 4.58
2027 2430 2.175202 ACTCGATCTCAGTTCAGGCTT 58.825 47.619 0.00 0.00 0.00 4.35
2028 2431 3.357203 ACTCGATCTCAGTTCAGGCTTA 58.643 45.455 0.00 0.00 0.00 3.09
2029 2432 3.129638 ACTCGATCTCAGTTCAGGCTTAC 59.870 47.826 0.00 0.00 0.00 2.34
2030 2433 2.097629 TCGATCTCAGTTCAGGCTTACG 59.902 50.000 0.00 0.00 0.00 3.18
2031 2434 2.796383 CGATCTCAGTTCAGGCTTACGG 60.796 54.545 0.00 0.00 0.00 4.02
2032 2435 1.919240 TCTCAGTTCAGGCTTACGGA 58.081 50.000 0.00 0.00 0.00 4.69
2033 2436 1.819288 TCTCAGTTCAGGCTTACGGAG 59.181 52.381 15.85 15.85 37.75 4.63
2034 2437 0.895530 TCAGTTCAGGCTTACGGAGG 59.104 55.000 0.00 0.00 0.00 4.30
2035 2438 0.895530 CAGTTCAGGCTTACGGAGGA 59.104 55.000 0.00 0.00 0.00 3.71
2036 2439 1.134965 CAGTTCAGGCTTACGGAGGAG 60.135 57.143 0.00 0.00 0.00 3.69
2037 2440 0.896226 GTTCAGGCTTACGGAGGAGT 59.104 55.000 0.00 0.00 0.00 3.85
2038 2441 1.135053 GTTCAGGCTTACGGAGGAGTC 60.135 57.143 0.00 0.00 0.00 3.36
2039 2442 0.683504 TCAGGCTTACGGAGGAGTCC 60.684 60.000 0.00 0.00 39.88 3.85
2049 2452 1.481871 GGAGGAGTCCGTTGGTATGA 58.518 55.000 2.76 0.00 31.37 2.15
2050 2453 2.040178 GGAGGAGTCCGTTGGTATGAT 58.960 52.381 2.76 0.00 31.37 2.45
2051 2454 2.036089 GGAGGAGTCCGTTGGTATGATC 59.964 54.545 2.76 0.00 31.37 2.92
2052 2455 2.036089 GAGGAGTCCGTTGGTATGATCC 59.964 54.545 2.76 0.00 0.00 3.36
2053 2456 2.040178 GGAGTCCGTTGGTATGATCCT 58.960 52.381 0.00 0.00 0.00 3.24
2054 2457 2.434702 GGAGTCCGTTGGTATGATCCTT 59.565 50.000 0.00 0.00 0.00 3.36
2055 2458 3.492829 GGAGTCCGTTGGTATGATCCTTC 60.493 52.174 0.00 0.00 0.00 3.46
2056 2459 3.375699 AGTCCGTTGGTATGATCCTTCT 58.624 45.455 0.00 0.00 0.00 2.85
2057 2460 3.385111 AGTCCGTTGGTATGATCCTTCTC 59.615 47.826 0.00 0.00 0.00 2.87
2058 2461 3.385111 GTCCGTTGGTATGATCCTTCTCT 59.615 47.826 0.00 0.00 0.00 3.10
2059 2462 3.637229 TCCGTTGGTATGATCCTTCTCTC 59.363 47.826 0.00 0.00 0.00 3.20
2060 2463 3.384789 CCGTTGGTATGATCCTTCTCTCA 59.615 47.826 0.00 0.00 0.00 3.27
2061 2464 4.039730 CCGTTGGTATGATCCTTCTCTCAT 59.960 45.833 0.00 0.00 36.19 2.90
2062 2465 4.987285 CGTTGGTATGATCCTTCTCTCATG 59.013 45.833 0.00 0.00 34.14 3.07
2063 2466 5.452496 CGTTGGTATGATCCTTCTCTCATGT 60.452 44.000 0.00 0.00 34.14 3.21
2064 2467 6.352516 GTTGGTATGATCCTTCTCTCATGTT 58.647 40.000 0.00 0.00 34.14 2.71
2065 2468 6.566079 TGGTATGATCCTTCTCTCATGTTT 57.434 37.500 0.00 0.00 34.14 2.83
2066 2469 6.962182 TGGTATGATCCTTCTCTCATGTTTT 58.038 36.000 0.00 0.00 34.14 2.43
2067 2470 6.825213 TGGTATGATCCTTCTCTCATGTTTTG 59.175 38.462 0.00 0.00 34.14 2.44
2068 2471 6.261826 GGTATGATCCTTCTCTCATGTTTTGG 59.738 42.308 0.00 0.00 34.14 3.28
2069 2472 4.592942 TGATCCTTCTCTCATGTTTTGGG 58.407 43.478 0.00 0.00 0.00 4.12
2070 2473 3.439857 TCCTTCTCTCATGTTTTGGGG 57.560 47.619 0.00 0.00 0.00 4.96
2071 2474 2.041620 TCCTTCTCTCATGTTTTGGGGG 59.958 50.000 0.00 0.00 0.00 5.40
2085 2488 2.124860 GGGGGCGTGCTTCGTTAT 60.125 61.111 4.16 0.00 42.13 1.89
2086 2489 1.747745 GGGGGCGTGCTTCGTTATT 60.748 57.895 4.16 0.00 42.13 1.40
2087 2490 1.712018 GGGGGCGTGCTTCGTTATTC 61.712 60.000 4.16 0.00 42.13 1.75
2088 2491 1.022451 GGGGCGTGCTTCGTTATTCA 61.022 55.000 4.16 0.00 42.13 2.57
2089 2492 0.800012 GGGCGTGCTTCGTTATTCAA 59.200 50.000 4.16 0.00 42.13 2.69
2090 2493 1.202031 GGGCGTGCTTCGTTATTCAAG 60.202 52.381 4.16 0.00 42.13 3.02
2091 2494 1.202031 GGCGTGCTTCGTTATTCAAGG 60.202 52.381 4.16 0.00 42.13 3.61
2092 2495 1.463444 GCGTGCTTCGTTATTCAAGGT 59.537 47.619 4.16 0.00 42.13 3.50
2093 2496 2.095919 GCGTGCTTCGTTATTCAAGGTT 60.096 45.455 4.16 0.00 42.13 3.50
2094 2497 3.732943 CGTGCTTCGTTATTCAAGGTTC 58.267 45.455 0.00 0.00 34.52 3.62
2095 2498 3.720920 CGTGCTTCGTTATTCAAGGTTCG 60.721 47.826 0.00 0.00 34.52 3.95
2096 2499 3.185797 GTGCTTCGTTATTCAAGGTTCGT 59.814 43.478 0.00 0.00 0.00 3.85
2097 2500 4.386652 GTGCTTCGTTATTCAAGGTTCGTA 59.613 41.667 0.00 0.00 0.00 3.43
2098 2501 4.989797 TGCTTCGTTATTCAAGGTTCGTAA 59.010 37.500 0.00 0.00 0.00 3.18
2099 2502 5.119588 TGCTTCGTTATTCAAGGTTCGTAAG 59.880 40.000 0.00 0.00 0.00 2.34
2100 2503 5.520022 TTCGTTATTCAAGGTTCGTAAGC 57.480 39.130 0.00 0.00 37.18 3.09
2101 2504 4.813027 TCGTTATTCAAGGTTCGTAAGCT 58.187 39.130 0.00 0.00 41.85 3.74
2103 2506 5.346822 TCGTTATTCAAGGTTCGTAAGCTTC 59.653 40.000 0.00 0.00 46.62 3.86
2104 2507 5.119588 CGTTATTCAAGGTTCGTAAGCTTCA 59.880 40.000 0.00 0.00 46.62 3.02
2105 2508 6.347079 CGTTATTCAAGGTTCGTAAGCTTCAA 60.347 38.462 0.00 4.42 46.62 2.69
2106 2509 5.613358 ATTCAAGGTTCGTAAGCTTCAAG 57.387 39.130 0.00 0.00 46.62 3.02
2107 2510 4.330944 TCAAGGTTCGTAAGCTTCAAGA 57.669 40.909 0.00 0.00 46.62 3.02
2108 2511 4.894784 TCAAGGTTCGTAAGCTTCAAGAT 58.105 39.130 0.00 0.00 46.62 2.40
2109 2512 4.929808 TCAAGGTTCGTAAGCTTCAAGATC 59.070 41.667 0.00 0.46 46.62 2.75
2110 2513 4.537135 AGGTTCGTAAGCTTCAAGATCA 57.463 40.909 0.00 0.00 35.27 2.92
2111 2514 5.091261 AGGTTCGTAAGCTTCAAGATCAT 57.909 39.130 0.00 0.00 35.27 2.45
2112 2515 6.222038 AGGTTCGTAAGCTTCAAGATCATA 57.778 37.500 0.00 0.00 35.27 2.15
2113 2516 6.821388 AGGTTCGTAAGCTTCAAGATCATAT 58.179 36.000 0.00 0.00 35.27 1.78
2114 2517 6.703607 AGGTTCGTAAGCTTCAAGATCATATG 59.296 38.462 0.00 0.00 35.27 1.78
2115 2518 6.480320 GGTTCGTAAGCTTCAAGATCATATGT 59.520 38.462 0.00 0.00 37.18 2.29
2116 2519 7.011482 GGTTCGTAAGCTTCAAGATCATATGTT 59.989 37.037 0.00 0.00 37.18 2.71
2117 2520 7.700322 TCGTAAGCTTCAAGATCATATGTTC 57.300 36.000 0.00 4.07 37.18 3.18
2118 2521 7.264947 TCGTAAGCTTCAAGATCATATGTTCA 58.735 34.615 0.00 0.00 37.18 3.18
2119 2522 7.763985 TCGTAAGCTTCAAGATCATATGTTCAA 59.236 33.333 0.00 1.92 37.18 2.69
2120 2523 8.060679 CGTAAGCTTCAAGATCATATGTTCAAG 58.939 37.037 0.00 10.69 0.00 3.02
2121 2524 7.934855 AAGCTTCAAGATCATATGTTCAAGT 57.065 32.000 14.67 0.00 0.00 3.16
2122 2525 7.934855 AGCTTCAAGATCATATGTTCAAGTT 57.065 32.000 14.67 6.32 0.00 2.66
2123 2526 7.983307 AGCTTCAAGATCATATGTTCAAGTTC 58.017 34.615 14.67 1.83 0.00 3.01
2124 2527 7.828223 AGCTTCAAGATCATATGTTCAAGTTCT 59.172 33.333 14.67 3.67 0.00 3.01
2125 2528 7.909121 GCTTCAAGATCATATGTTCAAGTTCTG 59.091 37.037 14.67 4.14 0.00 3.02
2126 2529 7.854557 TCAAGATCATATGTTCAAGTTCTGG 57.145 36.000 14.67 1.53 0.00 3.86
2127 2530 6.825213 TCAAGATCATATGTTCAAGTTCTGGG 59.175 38.462 14.67 1.17 0.00 4.45
2128 2531 6.319048 AGATCATATGTTCAAGTTCTGGGT 57.681 37.500 14.67 0.00 0.00 4.51
2129 2532 6.352516 AGATCATATGTTCAAGTTCTGGGTC 58.647 40.000 14.67 0.00 0.00 4.46
2130 2533 5.762179 TCATATGTTCAAGTTCTGGGTCT 57.238 39.130 1.90 0.00 0.00 3.85
2131 2534 5.734720 TCATATGTTCAAGTTCTGGGTCTC 58.265 41.667 1.90 0.00 0.00 3.36
2132 2535 5.248248 TCATATGTTCAAGTTCTGGGTCTCA 59.752 40.000 1.90 0.00 0.00 3.27
2133 2536 4.647564 ATGTTCAAGTTCTGGGTCTCAT 57.352 40.909 0.00 0.00 0.00 2.90
2134 2537 4.008074 TGTTCAAGTTCTGGGTCTCATC 57.992 45.455 0.00 0.00 0.00 2.92
2135 2538 3.648067 TGTTCAAGTTCTGGGTCTCATCT 59.352 43.478 0.00 0.00 0.00 2.90
2136 2539 4.103153 TGTTCAAGTTCTGGGTCTCATCTT 59.897 41.667 0.00 0.00 0.00 2.40
2137 2540 4.982241 TCAAGTTCTGGGTCTCATCTTT 57.018 40.909 0.00 0.00 0.00 2.52
2138 2541 4.645535 TCAAGTTCTGGGTCTCATCTTTG 58.354 43.478 0.00 0.00 0.00 2.77
2139 2542 3.710209 AGTTCTGGGTCTCATCTTTGG 57.290 47.619 0.00 0.00 0.00 3.28
2140 2543 3.251484 AGTTCTGGGTCTCATCTTTGGA 58.749 45.455 0.00 0.00 0.00 3.53
2141 2544 3.848975 AGTTCTGGGTCTCATCTTTGGAT 59.151 43.478 0.00 0.00 0.00 3.41
2143 2546 3.184628 TCTGGGTCTCATCTTTGGATGT 58.815 45.455 5.99 0.00 46.74 3.06
2144 2547 3.588842 TCTGGGTCTCATCTTTGGATGTT 59.411 43.478 5.99 0.00 46.74 2.71
2145 2548 3.689347 TGGGTCTCATCTTTGGATGTTG 58.311 45.455 5.99 2.15 46.74 3.33
2146 2549 3.019564 GGGTCTCATCTTTGGATGTTGG 58.980 50.000 5.99 0.21 46.74 3.77
2147 2550 3.562176 GGGTCTCATCTTTGGATGTTGGT 60.562 47.826 5.99 0.00 46.74 3.67
2148 2551 4.082125 GGTCTCATCTTTGGATGTTGGTT 58.918 43.478 5.99 0.00 46.74 3.67
2149 2552 4.524328 GGTCTCATCTTTGGATGTTGGTTT 59.476 41.667 5.99 0.00 46.74 3.27
2150 2553 5.011023 GGTCTCATCTTTGGATGTTGGTTTT 59.989 40.000 5.99 0.00 46.74 2.43
2151 2554 5.922544 GTCTCATCTTTGGATGTTGGTTTTG 59.077 40.000 5.99 0.00 46.74 2.44
2152 2555 4.630111 TCATCTTTGGATGTTGGTTTTGC 58.370 39.130 5.99 0.00 46.74 3.68
2153 2556 3.090952 TCTTTGGATGTTGGTTTTGCG 57.909 42.857 0.00 0.00 0.00 4.85
2154 2557 2.690497 TCTTTGGATGTTGGTTTTGCGA 59.310 40.909 0.00 0.00 0.00 5.10
2155 2558 3.320541 TCTTTGGATGTTGGTTTTGCGAT 59.679 39.130 0.00 0.00 0.00 4.58
2156 2559 3.742433 TTGGATGTTGGTTTTGCGATT 57.258 38.095 0.00 0.00 0.00 3.34
2157 2560 3.742433 TGGATGTTGGTTTTGCGATTT 57.258 38.095 0.00 0.00 0.00 2.17
2158 2561 4.855715 TGGATGTTGGTTTTGCGATTTA 57.144 36.364 0.00 0.00 0.00 1.40
2159 2562 4.551388 TGGATGTTGGTTTTGCGATTTAC 58.449 39.130 0.00 0.00 0.00 2.01
2160 2563 4.038042 TGGATGTTGGTTTTGCGATTTACA 59.962 37.500 0.00 0.00 0.00 2.41
2161 2564 4.985409 GGATGTTGGTTTTGCGATTTACAA 59.015 37.500 0.00 0.00 0.00 2.41
2162 2565 5.637387 GGATGTTGGTTTTGCGATTTACAAT 59.363 36.000 0.00 0.00 0.00 2.71
2163 2566 5.896922 TGTTGGTTTTGCGATTTACAATG 57.103 34.783 0.00 0.00 0.00 2.82
2164 2567 4.747108 TGTTGGTTTTGCGATTTACAATGG 59.253 37.500 0.00 0.00 0.00 3.16
2165 2568 4.855715 TGGTTTTGCGATTTACAATGGA 57.144 36.364 0.00 0.00 0.00 3.41
2166 2569 4.804108 TGGTTTTGCGATTTACAATGGAG 58.196 39.130 0.00 0.00 0.00 3.86
2167 2570 4.173256 GGTTTTGCGATTTACAATGGAGG 58.827 43.478 0.00 0.00 0.00 4.30
2168 2571 4.173256 GTTTTGCGATTTACAATGGAGGG 58.827 43.478 0.00 0.00 0.00 4.30
2169 2572 3.358111 TTGCGATTTACAATGGAGGGA 57.642 42.857 0.00 0.00 0.00 4.20
2170 2573 3.358111 TGCGATTTACAATGGAGGGAA 57.642 42.857 0.00 0.00 0.00 3.97
2171 2574 3.897239 TGCGATTTACAATGGAGGGAAT 58.103 40.909 0.00 0.00 0.00 3.01
2172 2575 5.042463 TGCGATTTACAATGGAGGGAATA 57.958 39.130 0.00 0.00 0.00 1.75
2173 2576 5.630121 TGCGATTTACAATGGAGGGAATAT 58.370 37.500 0.00 0.00 0.00 1.28
2174 2577 5.705441 TGCGATTTACAATGGAGGGAATATC 59.295 40.000 0.00 0.00 0.00 1.63
2175 2578 5.940470 GCGATTTACAATGGAGGGAATATCT 59.060 40.000 0.00 0.00 0.00 1.98
2176 2579 6.092807 GCGATTTACAATGGAGGGAATATCTC 59.907 42.308 0.00 0.00 0.00 2.75
2177 2580 7.161404 CGATTTACAATGGAGGGAATATCTCA 58.839 38.462 0.00 0.00 33.18 3.27
2178 2581 7.661437 CGATTTACAATGGAGGGAATATCTCAA 59.339 37.037 0.00 0.00 33.18 3.02
2179 2582 9.525826 GATTTACAATGGAGGGAATATCTCAAT 57.474 33.333 0.00 0.00 33.18 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
359 686 2.415168 ACACGCATCGTCCTTTTATGTG 59.585 45.455 0.00 0.00 38.32 3.21
406 735 1.477685 GGTCCTGGTCGTGAAAGGGA 61.478 60.000 0.00 0.00 0.00 4.20
428 757 2.354704 CCTCGTGTTCATGTACATGGGT 60.355 50.000 30.56 0.00 39.24 4.51
439 768 3.126001 AGCTGAAATTCCTCGTGTTCA 57.874 42.857 0.00 0.00 0.00 3.18
440 769 3.748568 AGAAGCTGAAATTCCTCGTGTTC 59.251 43.478 0.00 0.00 0.00 3.18
513 842 3.221964 AGGAATGCGTGCTTTTGAATC 57.778 42.857 0.00 0.00 0.00 2.52
554 883 1.153667 GCAGCAGAGGAAGAGTCGG 60.154 63.158 0.00 0.00 0.00 4.79
598 936 8.158169 TGTTCGACAAGTAGAACCGTATATAT 57.842 34.615 18.94 0.00 42.17 0.86
599 937 7.552458 TGTTCGACAAGTAGAACCGTATATA 57.448 36.000 18.94 1.42 42.17 0.86
600 938 6.441093 TGTTCGACAAGTAGAACCGTATAT 57.559 37.500 18.94 0.00 42.17 0.86
782 1134 6.445357 TCGTCCGTATATATACATGCATGT 57.555 37.500 33.20 33.20 44.48 3.21
830 1187 4.342951 TGAGGAACTGAGGTTACTTTCGAA 59.657 41.667 0.00 0.00 45.80 3.71
831 1188 3.893200 TGAGGAACTGAGGTTACTTTCGA 59.107 43.478 0.00 0.00 45.80 3.71
833 1190 3.997681 GCTGAGGAACTGAGGTTACTTTC 59.002 47.826 0.00 0.00 45.80 2.62
834 1191 3.244596 GGCTGAGGAACTGAGGTTACTTT 60.245 47.826 0.00 0.00 45.80 2.66
835 1192 2.303311 GGCTGAGGAACTGAGGTTACTT 59.697 50.000 0.00 0.00 45.80 2.24
837 1194 1.623811 TGGCTGAGGAACTGAGGTTAC 59.376 52.381 0.00 0.00 40.98 2.50
922 1284 1.202533 ACTGAACCCAACAGAGACACG 60.203 52.381 0.00 0.00 38.55 4.49
954 1323 1.367840 CTAGGAAAGATCGCCCCGG 59.632 63.158 0.00 0.00 0.00 5.73
1010 1390 1.152902 AGCAAGAGCAGCAACACCA 60.153 52.632 0.00 0.00 45.49 4.17
1065 1445 4.700448 TCCCCCACGAACGGCCTA 62.700 66.667 0.00 0.00 0.00 3.93
1241 1621 0.826062 GGTTGCTGGATCCCAAATGG 59.174 55.000 9.90 0.00 30.80 3.16
1302 1682 1.223187 CCACGTACACAGAAACACCC 58.777 55.000 0.00 0.00 0.00 4.61
1393 1783 5.808366 TCTACCACAAGTCAGAAGATGTT 57.192 39.130 0.00 0.00 0.00 2.71
1394 1784 5.808366 TTCTACCACAAGTCAGAAGATGT 57.192 39.130 0.00 0.00 0.00 3.06
1395 1785 8.777865 TTAATTCTACCACAAGTCAGAAGATG 57.222 34.615 0.00 0.00 31.00 2.90
1396 1786 7.550906 GCTTAATTCTACCACAAGTCAGAAGAT 59.449 37.037 0.00 0.00 31.00 2.40
1397 1787 6.874134 GCTTAATTCTACCACAAGTCAGAAGA 59.126 38.462 0.00 0.00 31.00 2.87
1398 1788 6.092807 GGCTTAATTCTACCACAAGTCAGAAG 59.907 42.308 0.00 0.00 31.00 2.85
1399 1789 5.938125 GGCTTAATTCTACCACAAGTCAGAA 59.062 40.000 0.00 0.00 0.00 3.02
1400 1790 5.248477 AGGCTTAATTCTACCACAAGTCAGA 59.752 40.000 0.00 0.00 0.00 3.27
1401 1791 5.491982 AGGCTTAATTCTACCACAAGTCAG 58.508 41.667 0.00 0.00 0.00 3.51
1402 1792 5.012664 TGAGGCTTAATTCTACCACAAGTCA 59.987 40.000 0.00 0.00 0.00 3.41
1425 1815 3.508793 ACTGAGCAAGGGATTCACATTTG 59.491 43.478 0.00 0.00 0.00 2.32
1439 1829 2.839486 ATGTTCTCCGAACTGAGCAA 57.161 45.000 8.06 0.00 32.22 3.91
1450 1840 5.068723 TCTGAAACTACCGGATATGTTCTCC 59.931 44.000 9.46 1.98 0.00 3.71
1496 1886 8.376889 TGTCAAAAAGAAAAAGAAAACTGCTT 57.623 26.923 0.00 0.00 0.00 3.91
1506 1896 5.977635 ACCTTCCCTGTCAAAAAGAAAAAG 58.022 37.500 0.00 0.00 0.00 2.27
1507 1897 6.367374 AACCTTCCCTGTCAAAAAGAAAAA 57.633 33.333 0.00 0.00 0.00 1.94
1508 1898 6.367374 AAACCTTCCCTGTCAAAAAGAAAA 57.633 33.333 0.00 0.00 0.00 2.29
1509 1899 5.105106 GGAAACCTTCCCTGTCAAAAAGAAA 60.105 40.000 0.00 0.00 44.30 2.52
1510 1900 4.404394 GGAAACCTTCCCTGTCAAAAAGAA 59.596 41.667 0.00 0.00 44.30 2.52
1511 1901 3.958147 GGAAACCTTCCCTGTCAAAAAGA 59.042 43.478 0.00 0.00 44.30 2.52
1512 1902 4.322080 GGAAACCTTCCCTGTCAAAAAG 57.678 45.455 0.00 0.00 44.30 2.27
1558 1949 2.079925 GTGGCTGTGAGAAATGGAGAC 58.920 52.381 0.00 0.00 0.00 3.36
1563 1954 1.133253 CGCGTGGCTGTGAGAAATG 59.867 57.895 0.00 0.00 0.00 2.32
1663 2066 8.724229 ACGGTCCTACAGTTAATATTTTTGAAC 58.276 33.333 0.00 0.00 0.00 3.18
1665 2068 9.941325 TTACGGTCCTACAGTTAATATTTTTGA 57.059 29.630 0.00 0.00 0.00 2.69
1694 2097 4.077822 GGAGGCCAATGATAGATTCAAGG 58.922 47.826 5.01 0.00 38.03 3.61
1695 2098 4.722220 TGGAGGCCAATGATAGATTCAAG 58.278 43.478 5.01 0.00 38.03 3.02
1696 2099 4.794311 TGGAGGCCAATGATAGATTCAA 57.206 40.909 5.01 0.00 38.03 2.69
1697 2100 4.166725 AGTTGGAGGCCAATGATAGATTCA 59.833 41.667 5.01 0.00 45.80 2.57
1698 2101 4.723309 AGTTGGAGGCCAATGATAGATTC 58.277 43.478 5.01 0.00 45.80 2.52
1699 2102 4.803329 AGTTGGAGGCCAATGATAGATT 57.197 40.909 5.01 0.00 45.80 2.40
1700 2103 5.912149 TTAGTTGGAGGCCAATGATAGAT 57.088 39.130 5.01 0.00 45.80 1.98
1701 2104 5.708736 TTTAGTTGGAGGCCAATGATAGA 57.291 39.130 5.01 0.00 45.80 1.98
1702 2105 6.966534 ATTTTAGTTGGAGGCCAATGATAG 57.033 37.500 5.01 0.00 45.80 2.08
1703 2106 7.147742 GGAAATTTTAGTTGGAGGCCAATGATA 60.148 37.037 5.01 0.00 45.80 2.15
1704 2107 6.352137 GGAAATTTTAGTTGGAGGCCAATGAT 60.352 38.462 5.01 0.00 45.80 2.45
1705 2108 5.046663 GGAAATTTTAGTTGGAGGCCAATGA 60.047 40.000 5.01 0.00 45.80 2.57
1706 2109 5.178061 GGAAATTTTAGTTGGAGGCCAATG 58.822 41.667 5.01 0.00 45.80 2.82
1707 2110 4.081697 CGGAAATTTTAGTTGGAGGCCAAT 60.082 41.667 5.01 0.00 45.80 3.16
1708 2111 3.257127 CGGAAATTTTAGTTGGAGGCCAA 59.743 43.478 5.01 0.00 41.69 4.52
1709 2112 2.823154 CGGAAATTTTAGTTGGAGGCCA 59.177 45.455 5.01 0.00 0.00 5.36
1710 2113 3.086282 TCGGAAATTTTAGTTGGAGGCC 58.914 45.455 0.00 0.00 0.00 5.19
1711 2114 4.007659 TCTCGGAAATTTTAGTTGGAGGC 58.992 43.478 0.00 0.00 0.00 4.70
1712 2115 6.569179 TTTCTCGGAAATTTTAGTTGGAGG 57.431 37.500 0.00 0.00 0.00 4.30
1713 2116 7.542130 CCATTTTCTCGGAAATTTTAGTTGGAG 59.458 37.037 0.00 0.00 0.00 3.86
1714 2117 7.375053 CCATTTTCTCGGAAATTTTAGTTGGA 58.625 34.615 0.00 0.00 0.00 3.53
1715 2118 6.589907 CCCATTTTCTCGGAAATTTTAGTTGG 59.410 38.462 0.00 0.00 0.00 3.77
1716 2119 7.328493 GTCCCATTTTCTCGGAAATTTTAGTTG 59.672 37.037 0.00 0.00 0.00 3.16
1717 2120 7.232737 AGTCCCATTTTCTCGGAAATTTTAGTT 59.767 33.333 0.00 0.00 0.00 2.24
1718 2121 6.719829 AGTCCCATTTTCTCGGAAATTTTAGT 59.280 34.615 0.00 0.00 0.00 2.24
1719 2122 7.158099 AGTCCCATTTTCTCGGAAATTTTAG 57.842 36.000 0.00 0.00 0.00 1.85
1720 2123 7.148137 GCTAGTCCCATTTTCTCGGAAATTTTA 60.148 37.037 0.00 0.00 0.00 1.52
1721 2124 6.350194 GCTAGTCCCATTTTCTCGGAAATTTT 60.350 38.462 0.00 0.00 0.00 1.82
1722 2125 5.125578 GCTAGTCCCATTTTCTCGGAAATTT 59.874 40.000 0.00 0.00 0.00 1.82
1723 2126 4.640647 GCTAGTCCCATTTTCTCGGAAATT 59.359 41.667 0.00 0.00 0.00 1.82
1724 2127 4.200092 GCTAGTCCCATTTTCTCGGAAAT 58.800 43.478 0.00 0.00 0.00 2.17
1725 2128 3.606687 GCTAGTCCCATTTTCTCGGAAA 58.393 45.455 0.00 0.00 0.00 3.13
1726 2129 2.093128 GGCTAGTCCCATTTTCTCGGAA 60.093 50.000 0.00 0.00 0.00 4.30
1727 2130 1.485066 GGCTAGTCCCATTTTCTCGGA 59.515 52.381 0.00 0.00 0.00 4.55
1728 2131 1.954927 GGCTAGTCCCATTTTCTCGG 58.045 55.000 0.00 0.00 0.00 4.63
1739 2142 2.578586 TAGACGGTGGGGGCTAGTCC 62.579 65.000 4.21 4.21 32.70 3.85
1740 2143 1.076485 TAGACGGTGGGGGCTAGTC 60.076 63.158 0.00 0.00 0.00 2.59
1741 2144 1.076192 CTAGACGGTGGGGGCTAGT 60.076 63.158 0.00 0.00 0.00 2.57
1742 2145 2.499827 GCTAGACGGTGGGGGCTAG 61.500 68.421 0.00 0.00 34.80 3.42
1743 2146 2.443390 GCTAGACGGTGGGGGCTA 60.443 66.667 0.00 0.00 0.00 3.93
1746 2149 3.782443 GTGGCTAGACGGTGGGGG 61.782 72.222 0.00 0.00 0.00 5.40
1747 2150 4.143333 CGTGGCTAGACGGTGGGG 62.143 72.222 0.00 0.00 35.65 4.96
1748 2151 4.814294 GCGTGGCTAGACGGTGGG 62.814 72.222 6.16 0.00 39.81 4.61
1749 2152 4.814294 GGCGTGGCTAGACGGTGG 62.814 72.222 6.16 0.00 39.81 4.61
1795 2198 4.758251 TGACCTGCGGCGTGGATG 62.758 66.667 23.34 5.48 0.00 3.51
1796 2199 4.760047 GTGACCTGCGGCGTGGAT 62.760 66.667 23.34 10.66 0.00 3.41
1825 2228 3.315142 TAGAGCTGCTTGGTGGCCG 62.315 63.158 2.53 0.00 0.00 6.13
1826 2229 1.746991 GTAGAGCTGCTTGGTGGCC 60.747 63.158 2.53 0.00 0.00 5.36
1827 2230 2.103042 CGTAGAGCTGCTTGGTGGC 61.103 63.158 2.53 0.00 0.00 5.01
1828 2231 2.103042 GCGTAGAGCTGCTTGGTGG 61.103 63.158 2.53 0.00 44.04 4.61
1829 2232 3.479370 GCGTAGAGCTGCTTGGTG 58.521 61.111 2.53 0.00 44.04 4.17
1839 2242 2.096248 AGAGGAACAGGAAGCGTAGAG 58.904 52.381 0.00 0.00 0.00 2.43
1840 2243 2.093106 GAGAGGAACAGGAAGCGTAGA 58.907 52.381 0.00 0.00 0.00 2.59
1841 2244 1.135333 GGAGAGGAACAGGAAGCGTAG 59.865 57.143 0.00 0.00 0.00 3.51
1842 2245 1.183549 GGAGAGGAACAGGAAGCGTA 58.816 55.000 0.00 0.00 0.00 4.42
1843 2246 0.543174 AGGAGAGGAACAGGAAGCGT 60.543 55.000 0.00 0.00 0.00 5.07
1844 2247 0.174617 GAGGAGAGGAACAGGAAGCG 59.825 60.000 0.00 0.00 0.00 4.68
1845 2248 0.539518 GGAGGAGAGGAACAGGAAGC 59.460 60.000 0.00 0.00 0.00 3.86
1846 2249 1.830477 CTGGAGGAGAGGAACAGGAAG 59.170 57.143 0.00 0.00 0.00 3.46
1847 2250 1.433199 TCTGGAGGAGAGGAACAGGAA 59.567 52.381 0.00 0.00 0.00 3.36
1848 2251 1.006519 CTCTGGAGGAGAGGAACAGGA 59.993 57.143 0.00 0.00 44.25 3.86
1849 2252 1.484038 CTCTGGAGGAGAGGAACAGG 58.516 60.000 0.00 0.00 44.25 4.00
1864 2267 0.612229 AGACATGGTGACCAGCTCTG 59.388 55.000 11.23 5.88 36.75 3.35
1865 2268 0.901124 GAGACATGGTGACCAGCTCT 59.099 55.000 11.23 11.89 36.75 4.09
1866 2269 0.901124 AGAGACATGGTGACCAGCTC 59.099 55.000 18.53 18.53 36.75 4.09
1867 2270 1.356124 AAGAGACATGGTGACCAGCT 58.644 50.000 11.23 7.32 36.75 4.24
1868 2271 2.191128 AAAGAGACATGGTGACCAGC 57.809 50.000 11.23 1.90 36.75 4.85
1869 2272 2.738846 CGAAAAGAGACATGGTGACCAG 59.261 50.000 11.23 4.99 36.75 4.00
1870 2273 2.367241 TCGAAAAGAGACATGGTGACCA 59.633 45.455 6.84 6.84 38.19 4.02
1871 2274 3.040147 TCGAAAAGAGACATGGTGACC 57.960 47.619 0.00 0.00 0.00 4.02
1872 2275 4.499183 AGATCGAAAAGAGACATGGTGAC 58.501 43.478 0.00 0.00 0.00 3.67
1873 2276 4.382040 GGAGATCGAAAAGAGACATGGTGA 60.382 45.833 0.00 0.00 0.00 4.02
1874 2277 3.868077 GGAGATCGAAAAGAGACATGGTG 59.132 47.826 0.00 0.00 0.00 4.17
1875 2278 3.429547 CGGAGATCGAAAAGAGACATGGT 60.430 47.826 0.00 0.00 42.43 3.55
1876 2279 3.119291 CGGAGATCGAAAAGAGACATGG 58.881 50.000 0.00 0.00 42.43 3.66
1877 2280 2.537625 GCGGAGATCGAAAAGAGACATG 59.462 50.000 0.00 0.00 42.43 3.21
1878 2281 2.428890 AGCGGAGATCGAAAAGAGACAT 59.571 45.455 0.00 0.00 42.43 3.06
1879 2282 1.819288 AGCGGAGATCGAAAAGAGACA 59.181 47.619 0.00 0.00 42.43 3.41
1880 2283 2.570442 AGCGGAGATCGAAAAGAGAC 57.430 50.000 0.00 0.00 42.43 3.36
1881 2284 2.478031 CGAAGCGGAGATCGAAAAGAGA 60.478 50.000 0.00 0.00 40.01 3.10
1882 2285 1.849219 CGAAGCGGAGATCGAAAAGAG 59.151 52.381 0.00 0.00 40.01 2.85
1883 2286 1.471287 TCGAAGCGGAGATCGAAAAGA 59.529 47.619 0.00 0.00 42.53 2.52
1884 2287 1.584308 GTCGAAGCGGAGATCGAAAAG 59.416 52.381 0.00 0.00 45.70 2.27
1885 2288 1.068125 TGTCGAAGCGGAGATCGAAAA 60.068 47.619 0.00 0.00 45.70 2.29
1886 2289 0.524414 TGTCGAAGCGGAGATCGAAA 59.476 50.000 0.00 0.00 45.70 3.46
1887 2290 0.524414 TTGTCGAAGCGGAGATCGAA 59.476 50.000 0.00 0.00 45.70 3.71
1888 2291 0.524414 TTTGTCGAAGCGGAGATCGA 59.476 50.000 0.00 0.00 43.07 3.59
1889 2292 0.917259 CTTTGTCGAAGCGGAGATCG 59.083 55.000 0.00 0.00 39.20 3.69
1890 2293 1.281899 CCTTTGTCGAAGCGGAGATC 58.718 55.000 0.00 0.00 33.84 2.75
1891 2294 0.108138 CCCTTTGTCGAAGCGGAGAT 60.108 55.000 0.00 0.00 33.84 2.75
1892 2295 1.292223 CCCTTTGTCGAAGCGGAGA 59.708 57.895 0.00 0.00 33.84 3.71
1893 2296 2.391389 GCCCTTTGTCGAAGCGGAG 61.391 63.158 10.15 0.00 33.84 4.63
1894 2297 2.358247 GCCCTTTGTCGAAGCGGA 60.358 61.111 10.15 0.00 33.84 5.54
1895 2298 2.040544 ATGCCCTTTGTCGAAGCGG 61.041 57.895 0.00 0.00 33.84 5.52
1896 2299 1.135315 CATGCCCTTTGTCGAAGCG 59.865 57.895 0.00 0.00 33.84 4.68
1897 2300 1.153958 GCATGCCCTTTGTCGAAGC 60.154 57.895 6.36 0.00 33.84 3.86
1898 2301 0.813184 ATGCATGCCCTTTGTCGAAG 59.187 50.000 16.68 0.00 35.02 3.79
1899 2302 1.255882 AATGCATGCCCTTTGTCGAA 58.744 45.000 16.68 0.00 0.00 3.71
1900 2303 1.067706 CAAATGCATGCCCTTTGTCGA 60.068 47.619 24.19 3.39 0.00 4.20
1901 2304 1.067706 TCAAATGCATGCCCTTTGTCG 60.068 47.619 28.00 13.65 32.89 4.35
1902 2305 2.747396 TCAAATGCATGCCCTTTGTC 57.253 45.000 28.00 0.42 32.89 3.18
1903 2306 2.633967 TCTTCAAATGCATGCCCTTTGT 59.366 40.909 28.00 5.86 32.89 2.83
1904 2307 2.997986 GTCTTCAAATGCATGCCCTTTG 59.002 45.455 25.56 25.56 0.00 2.77
1905 2308 2.353011 CGTCTTCAAATGCATGCCCTTT 60.353 45.455 16.68 12.14 0.00 3.11
1906 2309 1.203052 CGTCTTCAAATGCATGCCCTT 59.797 47.619 16.68 5.97 0.00 3.95
1907 2310 0.813184 CGTCTTCAAATGCATGCCCT 59.187 50.000 16.68 0.00 0.00 5.19
1908 2311 0.179129 CCGTCTTCAAATGCATGCCC 60.179 55.000 16.68 0.00 0.00 5.36
1909 2312 0.803380 GCCGTCTTCAAATGCATGCC 60.803 55.000 16.68 0.00 0.00 4.40
1910 2313 0.109179 TGCCGTCTTCAAATGCATGC 60.109 50.000 11.82 11.82 0.00 4.06
1911 2314 2.098607 AGATGCCGTCTTCAAATGCATG 59.901 45.455 0.00 0.00 42.33 4.06
1912 2315 2.098607 CAGATGCCGTCTTCAAATGCAT 59.901 45.455 0.00 0.00 44.74 3.96
1913 2316 1.469703 CAGATGCCGTCTTCAAATGCA 59.530 47.619 0.00 0.00 34.00 3.96
1914 2317 1.202222 CCAGATGCCGTCTTCAAATGC 60.202 52.381 0.00 0.00 34.00 3.56
1915 2318 2.358957 TCCAGATGCCGTCTTCAAATG 58.641 47.619 0.00 0.00 34.00 2.32
1916 2319 2.787473 TCCAGATGCCGTCTTCAAAT 57.213 45.000 0.00 0.00 34.00 2.32
1917 2320 2.559698 TTCCAGATGCCGTCTTCAAA 57.440 45.000 0.00 0.00 34.00 2.69
1918 2321 2.787473 ATTCCAGATGCCGTCTTCAA 57.213 45.000 0.00 0.00 34.00 2.69
1919 2322 2.237143 AGAATTCCAGATGCCGTCTTCA 59.763 45.455 0.65 0.00 34.00 3.02
1920 2323 2.869192 GAGAATTCCAGATGCCGTCTTC 59.131 50.000 0.65 0.00 34.00 2.87
1921 2324 2.503356 AGAGAATTCCAGATGCCGTCTT 59.497 45.455 0.65 0.00 34.00 3.01
1922 2325 2.114616 AGAGAATTCCAGATGCCGTCT 58.885 47.619 0.65 0.00 37.80 4.18
1923 2326 2.611225 AGAGAATTCCAGATGCCGTC 57.389 50.000 0.65 0.00 0.00 4.79
1924 2327 2.237143 TGAAGAGAATTCCAGATGCCGT 59.763 45.455 0.65 0.00 0.00 5.68
1925 2328 2.910199 TGAAGAGAATTCCAGATGCCG 58.090 47.619 0.65 0.00 0.00 5.69
1926 2329 4.716794 AGATGAAGAGAATTCCAGATGCC 58.283 43.478 0.65 0.00 0.00 4.40
1927 2330 4.756135 GGAGATGAAGAGAATTCCAGATGC 59.244 45.833 0.65 0.00 0.00 3.91
1928 2331 5.163227 TGGGAGATGAAGAGAATTCCAGATG 60.163 44.000 0.65 0.00 0.00 2.90
1929 2332 4.973856 TGGGAGATGAAGAGAATTCCAGAT 59.026 41.667 0.65 0.00 0.00 2.90
1930 2333 4.365368 TGGGAGATGAAGAGAATTCCAGA 58.635 43.478 0.65 0.00 0.00 3.86
1931 2334 4.767578 TGGGAGATGAAGAGAATTCCAG 57.232 45.455 0.65 0.00 0.00 3.86
1932 2335 5.192321 TGATTGGGAGATGAAGAGAATTCCA 59.808 40.000 0.65 0.00 0.00 3.53
1933 2336 5.688807 TGATTGGGAGATGAAGAGAATTCC 58.311 41.667 0.65 0.00 0.00 3.01
1934 2337 6.827762 AGTTGATTGGGAGATGAAGAGAATTC 59.172 38.462 0.00 0.00 0.00 2.17
1935 2338 6.729428 AGTTGATTGGGAGATGAAGAGAATT 58.271 36.000 0.00 0.00 0.00 2.17
1936 2339 6.324601 AGTTGATTGGGAGATGAAGAGAAT 57.675 37.500 0.00 0.00 0.00 2.40
1937 2340 5.768980 AGTTGATTGGGAGATGAAGAGAA 57.231 39.130 0.00 0.00 0.00 2.87
1938 2341 5.960811 AGTAGTTGATTGGGAGATGAAGAGA 59.039 40.000 0.00 0.00 0.00 3.10
1939 2342 6.098124 AGAGTAGTTGATTGGGAGATGAAGAG 59.902 42.308 0.00 0.00 0.00 2.85
1940 2343 5.960811 AGAGTAGTTGATTGGGAGATGAAGA 59.039 40.000 0.00 0.00 0.00 2.87
1941 2344 6.047870 CAGAGTAGTTGATTGGGAGATGAAG 58.952 44.000 0.00 0.00 0.00 3.02
1942 2345 5.721480 TCAGAGTAGTTGATTGGGAGATGAA 59.279 40.000 0.00 0.00 0.00 2.57
1943 2346 5.272402 TCAGAGTAGTTGATTGGGAGATGA 58.728 41.667 0.00 0.00 0.00 2.92
1944 2347 5.453057 CCTCAGAGTAGTTGATTGGGAGATG 60.453 48.000 0.00 0.00 0.00 2.90
1945 2348 4.653341 CCTCAGAGTAGTTGATTGGGAGAT 59.347 45.833 0.00 0.00 0.00 2.75
1946 2349 4.026744 CCTCAGAGTAGTTGATTGGGAGA 58.973 47.826 0.00 0.00 0.00 3.71
1947 2350 3.133721 CCCTCAGAGTAGTTGATTGGGAG 59.866 52.174 0.00 0.00 33.83 4.30
1948 2351 3.107601 CCCTCAGAGTAGTTGATTGGGA 58.892 50.000 0.00 0.00 33.83 4.37
1949 2352 2.420687 GCCCTCAGAGTAGTTGATTGGG 60.421 54.545 0.00 0.00 34.66 4.12
1950 2353 2.237143 TGCCCTCAGAGTAGTTGATTGG 59.763 50.000 0.00 0.00 0.00 3.16
1951 2354 3.529533 CTGCCCTCAGAGTAGTTGATTG 58.470 50.000 0.00 0.00 42.95 2.67
1952 2355 2.093235 GCTGCCCTCAGAGTAGTTGATT 60.093 50.000 0.00 0.00 42.95 2.57
1953 2356 1.484240 GCTGCCCTCAGAGTAGTTGAT 59.516 52.381 0.00 0.00 42.95 2.57
1954 2357 0.898320 GCTGCCCTCAGAGTAGTTGA 59.102 55.000 0.00 0.00 42.95 3.18
1955 2358 0.459237 CGCTGCCCTCAGAGTAGTTG 60.459 60.000 0.00 0.00 42.95 3.16
1956 2359 1.608717 CCGCTGCCCTCAGAGTAGTT 61.609 60.000 0.00 0.00 42.95 2.24
1957 2360 2.055042 CCGCTGCCCTCAGAGTAGT 61.055 63.158 0.00 0.00 42.95 2.73
1958 2361 1.112315 ATCCGCTGCCCTCAGAGTAG 61.112 60.000 0.00 0.00 42.95 2.57
1959 2362 0.687757 AATCCGCTGCCCTCAGAGTA 60.688 55.000 0.00 0.00 42.95 2.59
1960 2363 1.992277 AATCCGCTGCCCTCAGAGT 60.992 57.895 0.00 0.00 42.95 3.24
1961 2364 1.523258 CAATCCGCTGCCCTCAGAG 60.523 63.158 0.00 0.00 42.95 3.35
1962 2365 1.964608 CTCAATCCGCTGCCCTCAGA 61.965 60.000 0.00 0.00 42.95 3.27
1963 2366 1.523258 CTCAATCCGCTGCCCTCAG 60.523 63.158 0.00 0.00 43.16 3.35
1964 2367 2.586245 CTCAATCCGCTGCCCTCA 59.414 61.111 0.00 0.00 0.00 3.86
1965 2368 2.203126 CCTCAATCCGCTGCCCTC 60.203 66.667 0.00 0.00 0.00 4.30
1966 2369 3.801997 CCCTCAATCCGCTGCCCT 61.802 66.667 0.00 0.00 0.00 5.19
1967 2370 2.631012 ATTCCCTCAATCCGCTGCCC 62.631 60.000 0.00 0.00 0.00 5.36
1968 2371 0.753111 AATTCCCTCAATCCGCTGCC 60.753 55.000 0.00 0.00 0.00 4.85
1969 2372 0.665298 GAATTCCCTCAATCCGCTGC 59.335 55.000 0.00 0.00 0.00 5.25
1970 2373 2.338577 AGAATTCCCTCAATCCGCTG 57.661 50.000 0.65 0.00 0.00 5.18
1971 2374 2.924421 GAAGAATTCCCTCAATCCGCT 58.076 47.619 0.65 0.00 39.83 5.52
1984 2387 4.871933 AATTCCGCAACCAAGAAGAATT 57.128 36.364 0.00 0.00 0.00 2.17
1985 2388 4.871933 AAATTCCGCAACCAAGAAGAAT 57.128 36.364 0.00 0.00 0.00 2.40
1986 2389 4.825085 AGTAAATTCCGCAACCAAGAAGAA 59.175 37.500 0.00 0.00 0.00 2.52
1987 2390 4.394729 AGTAAATTCCGCAACCAAGAAGA 58.605 39.130 0.00 0.00 0.00 2.87
1988 2391 4.669197 CGAGTAAATTCCGCAACCAAGAAG 60.669 45.833 0.00 0.00 0.00 2.85
1989 2392 3.187637 CGAGTAAATTCCGCAACCAAGAA 59.812 43.478 0.00 0.00 0.00 2.52
1990 2393 2.739913 CGAGTAAATTCCGCAACCAAGA 59.260 45.455 0.00 0.00 0.00 3.02
1991 2394 2.739913 TCGAGTAAATTCCGCAACCAAG 59.260 45.455 0.00 0.00 0.00 3.61
1992 2395 2.768698 TCGAGTAAATTCCGCAACCAA 58.231 42.857 0.00 0.00 0.00 3.67
1993 2396 2.459060 TCGAGTAAATTCCGCAACCA 57.541 45.000 0.00 0.00 0.00 3.67
1994 2397 3.195661 AGATCGAGTAAATTCCGCAACC 58.804 45.455 0.00 0.00 0.00 3.77
1995 2398 3.863424 TGAGATCGAGTAAATTCCGCAAC 59.137 43.478 0.00 0.00 0.00 4.17
1996 2399 4.112634 CTGAGATCGAGTAAATTCCGCAA 58.887 43.478 0.00 0.00 0.00 4.85
1997 2400 3.130516 ACTGAGATCGAGTAAATTCCGCA 59.869 43.478 0.00 0.00 0.00 5.69
1998 2401 3.707793 ACTGAGATCGAGTAAATTCCGC 58.292 45.455 0.00 0.00 0.00 5.54
1999 2402 5.340803 TGAACTGAGATCGAGTAAATTCCG 58.659 41.667 1.34 0.00 0.00 4.30
2000 2403 5.751028 CCTGAACTGAGATCGAGTAAATTCC 59.249 44.000 1.34 0.00 0.00 3.01
2001 2404 5.233263 GCCTGAACTGAGATCGAGTAAATTC 59.767 44.000 1.34 0.00 0.00 2.17
2002 2405 5.105146 AGCCTGAACTGAGATCGAGTAAATT 60.105 40.000 1.34 0.00 0.00 1.82
2003 2406 4.404073 AGCCTGAACTGAGATCGAGTAAAT 59.596 41.667 1.34 0.00 0.00 1.40
2004 2407 3.764434 AGCCTGAACTGAGATCGAGTAAA 59.236 43.478 1.34 0.00 0.00 2.01
2005 2408 3.357203 AGCCTGAACTGAGATCGAGTAA 58.643 45.455 1.34 0.00 0.00 2.24
2006 2409 3.006112 AGCCTGAACTGAGATCGAGTA 57.994 47.619 1.34 0.00 0.00 2.59
2007 2410 1.846007 AGCCTGAACTGAGATCGAGT 58.154 50.000 0.00 0.00 0.00 4.18
2008 2411 2.957491 AAGCCTGAACTGAGATCGAG 57.043 50.000 0.00 0.00 0.00 4.04
2009 2412 2.097629 CGTAAGCCTGAACTGAGATCGA 59.902 50.000 0.00 0.00 0.00 3.59
2010 2413 2.455032 CGTAAGCCTGAACTGAGATCG 58.545 52.381 0.00 0.00 0.00 3.69
2011 2414 2.427453 TCCGTAAGCCTGAACTGAGATC 59.573 50.000 0.00 0.00 0.00 2.75
2012 2415 2.428890 CTCCGTAAGCCTGAACTGAGAT 59.571 50.000 0.00 0.00 30.96 2.75
2013 2416 1.819288 CTCCGTAAGCCTGAACTGAGA 59.181 52.381 0.00 0.00 30.96 3.27
2014 2417 1.134965 CCTCCGTAAGCCTGAACTGAG 60.135 57.143 0.00 0.00 0.00 3.35
2015 2418 0.895530 CCTCCGTAAGCCTGAACTGA 59.104 55.000 0.00 0.00 0.00 3.41
2016 2419 0.895530 TCCTCCGTAAGCCTGAACTG 59.104 55.000 0.00 0.00 0.00 3.16
2017 2420 1.187087 CTCCTCCGTAAGCCTGAACT 58.813 55.000 0.00 0.00 0.00 3.01
2018 2421 0.896226 ACTCCTCCGTAAGCCTGAAC 59.104 55.000 0.00 0.00 0.00 3.18
2019 2422 1.183549 GACTCCTCCGTAAGCCTGAA 58.816 55.000 0.00 0.00 0.00 3.02
2020 2423 0.683504 GGACTCCTCCGTAAGCCTGA 60.684 60.000 0.00 0.00 0.00 3.86
2021 2424 1.817209 GGACTCCTCCGTAAGCCTG 59.183 63.158 0.00 0.00 0.00 4.85
2022 2425 4.358810 GGACTCCTCCGTAAGCCT 57.641 61.111 0.00 0.00 0.00 4.58
2030 2433 1.481871 TCATACCAACGGACTCCTCC 58.518 55.000 0.00 0.00 0.00 4.30
2031 2434 2.036089 GGATCATACCAACGGACTCCTC 59.964 54.545 0.00 0.00 0.00 3.71
2032 2435 2.040178 GGATCATACCAACGGACTCCT 58.960 52.381 0.00 0.00 0.00 3.69
2033 2436 2.040178 AGGATCATACCAACGGACTCC 58.960 52.381 0.00 0.00 0.00 3.85
2034 2437 3.385111 AGAAGGATCATACCAACGGACTC 59.615 47.826 0.00 0.00 0.00 3.36
2035 2438 3.375699 AGAAGGATCATACCAACGGACT 58.624 45.455 0.00 0.00 0.00 3.85
2036 2439 3.385111 AGAGAAGGATCATACCAACGGAC 59.615 47.826 0.00 0.00 0.00 4.79
2037 2440 3.637229 GAGAGAAGGATCATACCAACGGA 59.363 47.826 0.00 0.00 0.00 4.69
2038 2441 3.384789 TGAGAGAAGGATCATACCAACGG 59.615 47.826 0.00 0.00 0.00 4.44
2039 2442 4.655762 TGAGAGAAGGATCATACCAACG 57.344 45.455 0.00 0.00 0.00 4.10
2040 2443 5.923204 ACATGAGAGAAGGATCATACCAAC 58.077 41.667 0.00 0.00 34.42 3.77
2041 2444 6.566079 AACATGAGAGAAGGATCATACCAA 57.434 37.500 0.00 0.00 34.42 3.67
2042 2445 6.566079 AAACATGAGAGAAGGATCATACCA 57.434 37.500 0.00 0.00 34.42 3.25
2043 2446 6.261826 CCAAAACATGAGAGAAGGATCATACC 59.738 42.308 0.00 0.00 34.42 2.73
2044 2447 6.261826 CCCAAAACATGAGAGAAGGATCATAC 59.738 42.308 0.00 0.00 34.42 2.39
2045 2448 6.359804 CCCAAAACATGAGAGAAGGATCATA 58.640 40.000 0.00 0.00 34.42 2.15
2046 2449 5.198965 CCCAAAACATGAGAGAAGGATCAT 58.801 41.667 0.00 0.00 36.60 2.45
2047 2450 4.568380 CCCCAAAACATGAGAGAAGGATCA 60.568 45.833 0.00 0.00 0.00 2.92
2048 2451 3.950395 CCCCAAAACATGAGAGAAGGATC 59.050 47.826 0.00 0.00 0.00 3.36
2049 2452 3.309410 CCCCCAAAACATGAGAGAAGGAT 60.309 47.826 0.00 0.00 0.00 3.24
2050 2453 2.041620 CCCCCAAAACATGAGAGAAGGA 59.958 50.000 0.00 0.00 0.00 3.36
2051 2454 2.450476 CCCCCAAAACATGAGAGAAGG 58.550 52.381 0.00 0.00 0.00 3.46
2068 2471 1.712018 GAATAACGAAGCACGCCCCC 61.712 60.000 0.00 0.00 46.94 5.40
2069 2472 1.022451 TGAATAACGAAGCACGCCCC 61.022 55.000 0.00 0.00 46.94 5.80
2070 2473 0.800012 TTGAATAACGAAGCACGCCC 59.200 50.000 0.00 0.00 46.94 6.13
2071 2474 1.202031 CCTTGAATAACGAAGCACGCC 60.202 52.381 0.00 0.00 46.94 5.68
2072 2475 1.463444 ACCTTGAATAACGAAGCACGC 59.537 47.619 0.00 0.00 46.94 5.34
2074 2477 3.185797 ACGAACCTTGAATAACGAAGCAC 59.814 43.478 0.00 0.00 0.00 4.40
2075 2478 3.395639 ACGAACCTTGAATAACGAAGCA 58.604 40.909 0.00 0.00 0.00 3.91
2076 2479 5.520022 TTACGAACCTTGAATAACGAAGC 57.480 39.130 0.00 0.00 0.00 3.86
2077 2480 5.347907 AGCTTACGAACCTTGAATAACGAAG 59.652 40.000 0.00 0.00 0.00 3.79
2078 2481 5.232463 AGCTTACGAACCTTGAATAACGAA 58.768 37.500 0.00 0.00 0.00 3.85
2079 2482 4.813027 AGCTTACGAACCTTGAATAACGA 58.187 39.130 0.00 0.00 0.00 3.85
2080 2483 5.119588 TGAAGCTTACGAACCTTGAATAACG 59.880 40.000 0.00 0.00 0.00 3.18
2081 2484 6.476243 TGAAGCTTACGAACCTTGAATAAC 57.524 37.500 0.00 0.00 0.00 1.89
2082 2485 6.932400 TCTTGAAGCTTACGAACCTTGAATAA 59.068 34.615 0.00 0.00 0.00 1.40
2083 2486 6.460781 TCTTGAAGCTTACGAACCTTGAATA 58.539 36.000 0.00 0.00 0.00 1.75
2084 2487 5.305585 TCTTGAAGCTTACGAACCTTGAAT 58.694 37.500 0.00 0.00 0.00 2.57
2085 2488 4.699637 TCTTGAAGCTTACGAACCTTGAA 58.300 39.130 0.00 0.00 0.00 2.69
2086 2489 4.330944 TCTTGAAGCTTACGAACCTTGA 57.669 40.909 0.00 0.00 0.00 3.02
2087 2490 4.690748 TGATCTTGAAGCTTACGAACCTTG 59.309 41.667 0.00 0.00 0.00 3.61
2088 2491 4.894784 TGATCTTGAAGCTTACGAACCTT 58.105 39.130 0.00 0.00 0.00 3.50
2089 2492 4.537135 TGATCTTGAAGCTTACGAACCT 57.463 40.909 0.00 0.00 0.00 3.50
2090 2493 6.480320 ACATATGATCTTGAAGCTTACGAACC 59.520 38.462 10.38 0.00 0.00 3.62
2091 2494 7.470289 ACATATGATCTTGAAGCTTACGAAC 57.530 36.000 10.38 0.00 0.00 3.95
2092 2495 7.763985 TGAACATATGATCTTGAAGCTTACGAA 59.236 33.333 10.38 0.00 0.00 3.85
2093 2496 7.264947 TGAACATATGATCTTGAAGCTTACGA 58.735 34.615 10.38 0.00 0.00 3.43
2094 2497 7.468922 TGAACATATGATCTTGAAGCTTACG 57.531 36.000 10.38 0.00 0.00 3.18
2095 2498 8.887717 ACTTGAACATATGATCTTGAAGCTTAC 58.112 33.333 10.38 0.00 0.00 2.34
2096 2499 9.453572 AACTTGAACATATGATCTTGAAGCTTA 57.546 29.630 10.38 0.00 0.00 3.09
2097 2500 7.934855 ACTTGAACATATGATCTTGAAGCTT 57.065 32.000 10.38 0.00 0.00 3.74
2098 2501 7.828223 AGAACTTGAACATATGATCTTGAAGCT 59.172 33.333 10.38 0.00 0.00 3.74
2099 2502 7.909121 CAGAACTTGAACATATGATCTTGAAGC 59.091 37.037 10.38 0.00 0.00 3.86
2100 2503 8.396390 CCAGAACTTGAACATATGATCTTGAAG 58.604 37.037 10.38 9.44 0.00 3.02
2101 2504 7.337689 CCCAGAACTTGAACATATGATCTTGAA 59.662 37.037 10.38 0.00 0.00 2.69
2102 2505 6.825213 CCCAGAACTTGAACATATGATCTTGA 59.175 38.462 10.38 0.00 0.00 3.02
2103 2506 6.600822 ACCCAGAACTTGAACATATGATCTTG 59.399 38.462 10.38 6.94 0.00 3.02
2104 2507 6.725364 ACCCAGAACTTGAACATATGATCTT 58.275 36.000 10.38 0.00 0.00 2.40
2105 2508 6.157645 AGACCCAGAACTTGAACATATGATCT 59.842 38.462 10.38 0.00 0.00 2.75
2106 2509 6.352516 AGACCCAGAACTTGAACATATGATC 58.647 40.000 10.38 7.97 0.00 2.92
2107 2510 6.070021 TGAGACCCAGAACTTGAACATATGAT 60.070 38.462 10.38 0.00 0.00 2.45
2108 2511 5.248248 TGAGACCCAGAACTTGAACATATGA 59.752 40.000 10.38 0.00 0.00 2.15
2109 2512 5.491070 TGAGACCCAGAACTTGAACATATG 58.509 41.667 0.00 0.00 0.00 1.78
2110 2513 5.762179 TGAGACCCAGAACTTGAACATAT 57.238 39.130 0.00 0.00 0.00 1.78
2111 2514 5.485353 AGATGAGACCCAGAACTTGAACATA 59.515 40.000 0.00 0.00 0.00 2.29
2112 2515 4.288105 AGATGAGACCCAGAACTTGAACAT 59.712 41.667 0.00 0.00 0.00 2.71
2113 2516 3.648067 AGATGAGACCCAGAACTTGAACA 59.352 43.478 0.00 0.00 0.00 3.18
2114 2517 4.278975 AGATGAGACCCAGAACTTGAAC 57.721 45.455 0.00 0.00 0.00 3.18
2115 2518 4.982241 AAGATGAGACCCAGAACTTGAA 57.018 40.909 0.00 0.00 0.00 2.69
2116 2519 4.505566 CCAAAGATGAGACCCAGAACTTGA 60.506 45.833 0.00 0.00 0.00 3.02
2117 2520 3.755378 CCAAAGATGAGACCCAGAACTTG 59.245 47.826 0.00 0.00 0.00 3.16
2118 2521 3.652869 TCCAAAGATGAGACCCAGAACTT 59.347 43.478 0.00 0.00 0.00 2.66
2119 2522 3.251484 TCCAAAGATGAGACCCAGAACT 58.749 45.455 0.00 0.00 0.00 3.01
2120 2523 3.703001 TCCAAAGATGAGACCCAGAAC 57.297 47.619 0.00 0.00 0.00 3.01
2132 2535 3.320541 TCGCAAAACCAACATCCAAAGAT 59.679 39.130 0.00 0.00 0.00 2.40
2133 2536 2.690497 TCGCAAAACCAACATCCAAAGA 59.310 40.909 0.00 0.00 0.00 2.52
2134 2537 3.090952 TCGCAAAACCAACATCCAAAG 57.909 42.857 0.00 0.00 0.00 2.77
2135 2538 3.742433 ATCGCAAAACCAACATCCAAA 57.258 38.095 0.00 0.00 0.00 3.28
2136 2539 3.742433 AATCGCAAAACCAACATCCAA 57.258 38.095 0.00 0.00 0.00 3.53
2137 2540 3.742433 AAATCGCAAAACCAACATCCA 57.258 38.095 0.00 0.00 0.00 3.41
2138 2541 4.551388 TGTAAATCGCAAAACCAACATCC 58.449 39.130 0.00 0.00 0.00 3.51
2139 2542 6.400940 CCATTGTAAATCGCAAAACCAACATC 60.401 38.462 0.00 0.00 0.00 3.06
2140 2543 5.407995 CCATTGTAAATCGCAAAACCAACAT 59.592 36.000 0.00 0.00 0.00 2.71
2141 2544 4.747108 CCATTGTAAATCGCAAAACCAACA 59.253 37.500 0.00 0.00 0.00 3.33
2142 2545 4.985409 TCCATTGTAAATCGCAAAACCAAC 59.015 37.500 0.00 0.00 0.00 3.77
2143 2546 5.201713 TCCATTGTAAATCGCAAAACCAA 57.798 34.783 0.00 0.00 0.00 3.67
2144 2547 4.321601 CCTCCATTGTAAATCGCAAAACCA 60.322 41.667 0.00 0.00 0.00 3.67
2145 2548 4.173256 CCTCCATTGTAAATCGCAAAACC 58.827 43.478 0.00 0.00 0.00 3.27
2146 2549 4.082463 TCCCTCCATTGTAAATCGCAAAAC 60.082 41.667 0.00 0.00 0.00 2.43
2147 2550 4.082845 TCCCTCCATTGTAAATCGCAAAA 58.917 39.130 0.00 0.00 0.00 2.44
2148 2551 3.691575 TCCCTCCATTGTAAATCGCAAA 58.308 40.909 0.00 0.00 0.00 3.68
2149 2552 3.358111 TCCCTCCATTGTAAATCGCAA 57.642 42.857 0.00 0.00 0.00 4.85
2150 2553 3.358111 TTCCCTCCATTGTAAATCGCA 57.642 42.857 0.00 0.00 0.00 5.10
2151 2554 5.940470 AGATATTCCCTCCATTGTAAATCGC 59.060 40.000 0.00 0.00 0.00 4.58
2152 2555 7.161404 TGAGATATTCCCTCCATTGTAAATCG 58.839 38.462 0.00 0.00 0.00 3.34
2153 2556 8.924511 TTGAGATATTCCCTCCATTGTAAATC 57.075 34.615 0.00 0.00 0.00 2.17


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.